Pregenerated sensors for DNAJC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024963Ensembl transcript IDs: ENSMUST00000025915.13, ENSMUST00000179118.2, ENSMUST00000235481.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTGTGTTTACGCTGCTGCTTCCTTGACTCCGGCCCCTGCGGCCTCACACTGTGGCTTTGGAGGACTGGCTaGATGCAGCTGGTGGTCATA | + |
|
Preference number: 2 (lower is better) Translates to: LCLRCCFLDSGPCGLTLWLWRTG*MQLVVI Trigger: TATGACCACCAGCTGCATTCAGCCAGTCCTCCAAAG...CCACAGTGTGAGGCCGCAGGGGCCGGAGTCAAGGAAGCAGCAGCGTAAACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235481.2 |
||
| 3UTR-3UTR CCA 90 bp | TTACGCTGCTGCTTCCTTGACTCCGGCCCCTGCGGCCTCACACTGTGGAACTGGAAGACTTTGGAGGACTaGCTGAATGCAGCTGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LRCCFLDSGPCGLTLWNWKTLED*LNAAGG Trigger: ACCACCAGCTGCATTCAGCCAGTCCTCCAAAGTCTT...CCAGTTCCACAGTGTGAGGCCGCAGGGGCCGGAGTCAAGGAAGCAGCAGCGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235481.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTACGCTGCTGCTTCCTTGACTCCGGCCCCTGCGGCCTCACACTGTGGAACTGCTCCCTGAAGACTTaGGAGGACTGGCTGAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: CLRCCFLDSGPCGLTLWNCSLKT*EDWLNA Trigger: TGCATTCAGCCAGTCCTCCAAAGTCTTCAGGGAGCA...GTTCCACAGTGTGAGGCCGCAGGGGCCGGAGTCAAGGAAGCAGCAGCGTAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235481.2 |
||
| CDS-3UTR TCA 90 bp | GCTCGGCTGTGCTCCCTGAAGACTTTGGAGGACTGGCTGAATGCAGCTGGTGGTGCCCTGTGGCGGCTGTaGGAAGTCGGATGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARLCSLKTLEDWLNAAGGALWRL*EVGWKG Trigger: GCCTTTCCATCCGACTTCTCACAGCCGCCACAGGGC...ACCACCAGCTGCATTCAGCCAGTCCTCCAAAGTCTTCAGGGAGCACAGCCGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235481.2 |
||
| CDS-3UTR GCA 90 bp | GCTCGGCTGTGCTCCCTGAAGACTTTGGAGGACTGGCTGAATGCAGCTGGTGGTCGGATGGAAAGGCTATaGGGCCACAGCCGGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARLCSLKTLEDWLNAAGGRMERL*GHSRHR Trigger: CCTATGCCGGCTGTGGCCGCATAGCCTTTCCATCCG...ACCACCAGCTGCATTCAGCCAGTCCTCCAAAGTCTTCAGGGAGCACAGCCGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235481.2 |
||
| CDS-3UTR GCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGAGGCAGGGAGGGTTCTaGCCGAGGCTGCTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGERQGGF*PRLLPL Trigger: CAGAGGCAGCAGCCTCGGGCAGAACCCTCCCTGCCT...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR CCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGAATCCTGGCTCTGTTaGCCCTGGCCCTGGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGEESWLC*PWPWPE Trigger: CTCGGGCCAGGGCCAGGGCCAACAGAGCCAGGATTC...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR TCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGCCCTGTGGCGGCTGTaGGAAGTCGGATGGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGEALWRL*EVGWKG Trigger: GCCTTTCCATCCGACTTCTCACAGCCGCCACAGGGC...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR TCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGTGCTGGCGCTCCTGCTaGATCCTGGCTCTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGECWRSC*ILALLA Trigger: GGCCAACAGAGCCAGGATTCAGCAGGAGCGCCAGCA...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACAGGCAGGGAGGGTTCTaGCCGAGGCTGCTGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDRQGGF*PRLLPL Trigger: CAGAGGCAGCAGCCTCGGGCAGAACCCTCCCTGCCT...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR CCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGCTCCTGCTGAATCCTaGCTCTGTTGGCCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGEAPAES*LCWPWP Trigger: GGGCCAGGGCCAACAGAGCCAGGATTCAGCAGGAGC...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR TCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACCCATGCCTGCCACCATaGGCAGGAGGCAGTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDPCLPP*AGGSTP Trigger: TGGGGTACTGCCTCCTGCTCATGGTGGCAGGCATGG...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR TCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACTGCTGGCGCTCCTGCTaGATCCTGGCTCTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDCWRSC*ILALLA Trigger: GGCCAACAGAGCCAGGATTCAGCAGGAGCGCCAGCA...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR GCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGCGGATGGAAAGGCTATaGGGCCACAGCCGGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGERMERL*GHSRHR Trigger: CCTATGCCGGCTGTGGCCGCATAGCCTTTCCATCCG...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACCTTGACTCCGGCCCCTaGGGCCTCACACTGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDLDSGP*GLTLWN Trigger: GTTCCACAGTGTGAGGCCGCAGGGGCCGGAGTCAAG...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR CCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGCCCAGTATTGAGCGTTaGGGGGTTCCCAGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGEPSIER*GVPRSC Trigger: GCAGCTCCTGGGAACCCCCCAACGCTCAATACTGGG...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025915.13 |
||
| CDS-3UTR CCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACGCTCCTGCTGAATCCTaGCTCTGTTGGCCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDAPAES*LCWPWP Trigger: GGGCCAGGGCCAACAGAGCCAGGATTCAGCAGGAGC...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR TCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGCCTGCTCCAGCTTCCTaGAGGCAACATAGTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGEPAPAS*RQHSAG Trigger: GCCTGCACTATGTTGCCTTCAGGAAGCTGGAGCAGG...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACCGGATGGAAAGGCTATaGGGCCACAGCCGGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDRMERL*GHSRHR Trigger: CCTATGCCGGCTGTGGCCGCATAGCCTTTCCATCCG...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR CCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGTGTTGGCCCTGGCCCTaGCCCGAGTGTCATTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGECWPWP*PECHCR Trigger: TCTACAATGACACTCGGGCCAGGGCCAGGGCCAACA...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR CCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGATCCTGGAGCTTTCTaGAGGCAGGGAGGGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGEDPGAF*RQGGFC Trigger: GCAGAACCCTCCCTGCCTCCAGAAAGCTCCAGGATC...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR TCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGTTGTGTCCTGGGGCATaGTCCTGGAGCTTTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGELCPGA*SWSFLE Trigger: CTCCAGAAAGCTCCAGGATCATGCCCCAGGACACAA...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACTGTTGGCCCTGGCCCTaGCCCGAGTGTCATTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDCWPWP*PECHCR Trigger: TCTACAATGACACTCGGGCCAGGGCCAGGGCCAACA...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACGATCCTGGAGCTTTCTaGAGGCAGGGAGGGTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDDPGAF*RQGGFC Trigger: GCAGAACCCTCCCTGCCTCCAGAAAGCTCCAGGATC...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR TCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGCTTTGGAGGACTGGCTaGATGCAGCTGGTGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGELWRTG*MQLVVI Trigger: TATGACCACCAGCTGCATTCAGCCAGTCCTCCAAAG...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACGGGGTTCCCAGGAGCTaGTGTGTGTCTGTTGCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDGVPRS*CVSVAY Trigger: ATACGCAACAGACACACAGCAGCTCCTGGGAACCCC...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025915.13 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACAAGCTGCGATGCACCTaGTCCAGCTTCCTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDKLRCT*SSFLKA Trigger: TGCCTTCAGGAAGCTGGAGCAGGTGCATCGCAGCTT...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR GCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACTCCATGAAGCTGCGATaGACCTGCTCCAGCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDSMKLR*TCSSFL Trigger: CAGGAAGCTGGAGCAGGTGCATCGCAGCTTCATGGA...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR TCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACCTTTGGAGGACTGGCTaGATGCAGCTGGTGGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDLWRTG*MQLVVI Trigger: TATGACCACCAGCTGCATTCAGCCAGTCCTCCAAAG...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR GCA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGAGCTGTGTGTCTGTTaGGTATACTTAGGCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASENEFIARVVLDRQQGEELCVC*VYLGSA Trigger: AGCCGAGCCTAAGTATACGCAACAGACACACAGCTC...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179118.2 |
||
| CDS-3UTR CCA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACAAGACTTTGGAGGACTaGCTGAATGCAGCTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SENEFIARVVLDRQQGEDKTLED*LNAAGG Trigger: ACCACCAGCTGCATTCAGCCAGTCCTCCAAAGTCTT...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS CCA 90 bp | ATGGAAAGGCTATGCGGCCACAGCCGGCATAGGCGCAGGGGCAGCTaGAGCAACAGGGACGGCATGACGACGACGGGCAGGCAGCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MERLCGHSRHRRRGS*SNRDGMTTTGRQLG Trigger: TCCTAGCTGCCTGCCCGTCGTCGTCATGCCGTCCCTGTTGCTCCAGCTGCCCCTGCGCCTATGCCGGCTGTGGCCGCATAGCCTTTCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025915.13 |
||
| CDS TCA 90 bp | ACAGACCTGTGGAGAAAAGCCCAAACCGCTGCCCTGTGGCGGCTGTaGGAAGTCGGATGGAAAGGCTATGCGGCCACAGCCGGCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TDLWRKAQTAALWRL*EVGWKGYAATAGIG Trigger: GCCTATGCCGGCTGTGGCCGCATAGCCTTTCCATCCGACTTCTCACAGCCGCCACAGGGCAGCGGTTTGGGCTTTTCTCCACAGGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235481.2 |
||
| CDS-3UTR CAA 90 bp | GCGTCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGTACGCTGCTGCTTCCTaGACTCCGGCCCCTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASENEFIARVVLDRQQGEYAAAS*TPAPAA Trigger: GGCCGCAGGGGCCGGAGTCAAGGAAGCAGCAGCGTA...CTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACTACGCTGCTGCTTCCTaGACTCCGGCCCCTGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SENEFIARVVLDRQQGEDYAAAS*TPAPAA Trigger: GGCCGCAGGGGCCGGAGTCAAGGAAGCAGCAGCGTA...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS GCA 90 bp | CGACTGAGCACTCGATATGCCTCATTCAGCTCCACAAAGCGGCTATaGAGGGCTGGGTTCCCAGGGTCTCGATCAGGGTGTAGCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLSTRYASFSSTKRL*RAGFPGSRSGCSSF Trigger: AAAAGAGCTACACCCTGATCGAGACCCTGGGAACCCAGCCCTGCATAGCCGCTTTGTGGAGCTGAATGAGGCATATCGAGTGCTCAGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS GCA 90 bp | GTGGTCATAGTTACGACGACTTTCCTCACGACTGAGCACTCGATATaGCTCATTCAGCTCCACAAAGCGGCTATGCAGGGCTGGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VVIVTTTFLTTEHSI*LIQLHKAAMQGWVP Trigger: GGGAACCCAGCCCTGCATAGCCGCTTTGTGGAGCTGAATGAGGCATATCGAGTGCTCAGTCGTGAGGAAAGTCGTCGTAACTATGACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS GCA 90 bp | ATAGTAATTAGTAGGGACAGACCTGTGGAGAAAAGCCCAAACCGCTaGCCTGTGGCGGCTGTGAGAAGTCGGATGGAAAGGCTATGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: IVISRDRPVEKSPNR*PVAAVRSRMERLCG Trigger: GCCGCATAGCCTTTCCATCCGACTTCTCACAGCCGCCACAGGGCAGCGGTTTGGGCTTTTCTCCACAGGTCTGTCCCTACTAATTACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235481.2 |
||
| CDS TCA 90 bp | CTGAATGCAGCTGGTGGTCATAGTTACGACGACTTTCCTCACGACTaGGCACTCGATATGCCTCATTCAGCTCCACAAAGCGGCTATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LNAAGGHSYDDFPHD*ALDMPHSAPQSGYA Trigger: TGCATAGCCGCTTTGTGGAGCTGAATGAGGCATATCGAGTGCTCAGTCGTGAGGAAAGTCGTCGTAACTATGACCACCAGCTGCATTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAAAATGAGTTTATTGCACGTGTAGTTCTGGACAGGCAGCAGGGAGAGGACTGCTCCCTGAAGACTTaGGAGGACTGGCTGAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: SENEFIARVVLDRQQGEDCSLKT*EDWLNA Trigger: TGCATTCAGCCAGTCCTCCAAAGTCTTCAGGGAGCA...GTCCTCTCCCTGCTGCCTGTCCAGAACTACACGTGCAATAAACTCATTTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS CCA 72 bp | GGGGCTTGTGTCCTGGGGCATGATCCTGGAGCTTTCTaGAGGCAGGGAGGGTTCTGCCCGAGGCTGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GACVLGHDPGAF*RQGGFCPRLLP Trigger: AGGCAGCAGCCTCGGGCAGAACCCTCCCTGCCTCCAGAAAGCTCCAGGATCATGCCCCAGGACACAAGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS GCA 72 bp | CAGTACCCCAGGACCCGCTGGTTGTGTTTACGCTGCTaGTTCCTTGACTCCGGCCCCTGCGGCCTCACACTG | + |
|
Preference number: 6 (lower is better) Translates to: QYPRTRWLCLRC*FLDSGPCGLTL Trigger: CAGTGTGAGGCCGCAGGGGCCGGAGTCAAGGAAGCAGCAGCGTAAACACAACCAGCGGGTCCTGGGGTACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS TCA 72 bp | CAGGACCCGCTGGTTGTGTTTACGCTGCTGCTTCCTTaGCTCCGGCCCCTGCGGCCTCACACTGTGGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: QDPLVVFTLLLP*LRPLRPHTVEL Trigger: CAGTTCCACAGTGTGAGGCCGCAGGGGCCGGAGTCAAGGAAGCAGCAGCGTAAACACAACCAGCGGGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS CAA 72 bp | CCAGGACCCGCTGGTTGTGTTTACGCTGCTGCTTCCTaGACTCCGGCCCCTGCGGCCTCACACTGTGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: PGPAGCVYAAAS*TPAPAASHCGT Trigger: AGTTCCACAGTGTGAGGCCGCAGGGGCCGGAGTCAAGGAAGCAGCAGCGTAAACACAACCAGCGGGTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS TCA 72 bp | TGGAGAAAAGCCCAAACCGCTGCCCTGTGGCGGCTGTaGGAAGTCGGATGGAAAGGCTATGCGGCCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WRKAQTAALWRL*EVGWKGYAATA Trigger: GGCTGTGGCCGCATAGCCTTTCCATCCGACTTCTCACAGCCGCCACAGGGCAGCGGTTTGGGCTTTTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235481.2 |
||
| CDS GCA 72 bp | AGTAGGGACAGACCTGTGGAGAAAAGCCCAAACCGCTaGCCTGTGGCGGCTGTGAGAAGTCGGATGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRDRPVEKSPNR*PVAAVRSRMER Trigger: CCTTTCCATCCGACTTCTCACAGCCGCCACAGGGCAGCGGTTTGGGCTTTTCTCCACAGGTCTGTCCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235481.2 |
||
| CDS CCA 72 bp | GCCTCACACTGTGGAACTGGGCCCAGTATTGAGCGTTaGGGGGTTCCCAGGAGCTGTGTGTCTGTTGCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: ASHCGTGPSIER*GVPRSCVSVAY Trigger: ATACGCAACAGACACACAGCTCCTGGGAACCCCCCAACGCTCAATACTGGGCCCAGTTCCACAGTGTGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179118.2 |
||
| CDS GCA 72 bp | ACTCGATATGCCTCATTCAGCTCCACAAAGCGGCTATaGAGGGCTGGGTTCCCAGGGTCTCGATCAGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TRYASFSSTKRL*RAGFPGSRSGC Trigger: ACACCCTGATCGAGACCCTGGGAACCCAGCCCTGCATAGCCGCTTTGTGGAGCTGAATGAGGCATATCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS GCA 72 bp | GTTACGACGACTTTCCTCACGACTGAGCACTCGATATaGCTCATTCAGCTCCACAAAGCGGCTATGCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VTTTFLTTEHSI*LIQLHKAAMQG Trigger: GCCCTGCATAGCCGCTTTGTGGAGCTGAATGAGGCATATCGAGTGCTCAGTCGTGAGGAAAGTCGTCGTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||
| CDS TCA 72 bp | GCTGGTGGTCATAGTTACGACGACTTTCCTCACGACTaGGCACTCGATATGCCTCATTCAGCTCCACAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AGGHSYDDFPHD*ALDMPHSAPQS Trigger: GCTTTGTGGAGCTGAATGAGGCATATCGAGTGCTCAGTCGTGAGGAAAGTCGTCGTAACTATGACCACCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025915.13 ENSMUST00000179118.2 |
||