Pregenerated sensors for DNAJC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022136Ensembl transcript IDs: ENSMUST00000022734.9
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTGCAATGTCAGGCAGGTAGCAGAAACTACTGTTCTGACGCTGTaGCTCGCCTGGGGCAGGCTGGACACCCCTACCTCACTAATGAGC | + |
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Preference number: 1 (lower is better) Translates to: PCNVRQVAETTVLTL*LAWGRLDTPTSLMS Trigger: GCTCATTAGTGAGGTAGGGGTGTCCAGCCTGCCCCAGGCGAGTCACAGCGTCAGAACAGTAGTTTCTGCTACCTGCCTGACATTGCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR TCA 90 bp | CTAAGTGGGAGTGTAAGCACCGAGATGCCTCCTTTGTTCTGCTGGTaGACACTGGGCTGTGCAAAGCAGAGGTGCCGTCACTCCAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: LSGSVSTEMPPLFCW*TLGCAKQRCRHSSS Trigger: TGAACTGGAGTGACGGCACCTCTGCTTTGCACAGCCCAGTGTTCACCAGCAGAACAAAGGAGGCATCTCGGTGCTTACACTCCCACTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR TCA 90 bp | CCACCTGCTGGTAAGTTTCCTGGAAGACGGTCTCCCCTCCTGCAGTaGGAGCTGAGGACACTGGTACAGAAATACTTGCAAGTGAATGGA | + |
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Preference number: 1 (lower is better) Translates to: PPAGKFPGRRSPLLQ*ELRTLVQKYLQVNG Trigger: TCCATTCACTTGCAAGTATTTCTGTACCAGTGTCCTCAGCTCTCACTGCAGGAGGGGAGACCGTCTTCCAGGAAACTTACCAGCAGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR CCA 90 bp | ATTTTGGTGGAGGCCCTGGCACGGAACTCACTATGTAAACCAAGCTaGCTCAAACTCTTAGGAATCCACCTGCCTCTGCCTGTCTCTACA | + |
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Preference number: 1 (lower is better) Translates to: ILVEALARNSLCKPS*LKLLGIHLPLPVST Trigger: TGTAGAGACAGGCAGAGGCAGGTGGATTCCTAAGAGTTTGAGCCAGCTTGGTTTACATAGTGAGTTCCGTGCCAGGGCCTCCACCAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR CCA 90 bp | GTGACACTGTACTTAGGAAGCTCACCACAGAGGAGGGGACGTCTATaGACAGAACGGAGTTCAGCCAAAGTGACCTTTGGTCATATTTTT | + |
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Preference number: 1 (lower is better) Translates to: VTLYLGSSPQRRGRL*TERSSAKVTFGHIF Trigger: AAAAATATGACCAAAGGTCACTTTGGCTGAACTCCGTTCTGTCCATAGACGTCCCCTCCTCTGTGGTGAGCTTCCTAAGTACAGTGTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR CCA 90 bp | GAGGGGACGTCTATGGACAGAACGGAGTTCAGCCAAAGTGACCTTTaGTCATATTTTTCCCAGAATTACTACACAGGTTACCTGCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: EGTSMDRTEFSQSDL*SYFSQNYYTGYLQF Trigger: GAACTGCAGGTAACCTGTGTAGTAATTCTGGGAAAAATATGACCAAAGGTCACTTTGGCTGAACTCCGTTCTGTCCATAGACGTCCCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR TCA 90 bp | CTAACCTCCTGCCACGGCATATGCCTTTGGCACCAAAATTTGCAATaGCAAAGCCTAATCCTCAGTTACTTTGGGTTGTTACAAGTAGGA | + |
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Preference number: 1 (lower is better) Translates to: LTSCHGICLWHQNLQ*QSLILSYFGLLQVG Trigger: TCCTACTTGTAACAACCCAAAGTAACTGAGGATTAGGCTTTGTCATTGCAAATTTTGGTGCCAAAGGCATATGCCGTGGCAGGAGGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR CCA 90 bp | CCAGAATTACTACACAGGTTACCTGCAGTTCCTAAACAGAGAAATTaGAATGTGGAAGTGGCTCTGCAAACAGAGGGAAAGACAAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: PELLHRLPAVPKQRN*NVEVALQTEGKTKA Trigger: TGCCTTTGTCTTTCCCTCTGTTTGCAGAGCCACTTCCACATTCCAATTTCTCTGTTTAGGAACTGCAGGTAACCTGTGTAGTAATTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR CCA 90 bp | GCAGTGAGAGCTGAGGACACTGGTACAGAAATACTTGCAAGTGAATaGACTGACCAAAGTCTAAGCATAACTGTTCCTCCAAAAATGAAG | + |
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Preference number: 1 (lower is better) Translates to: AVRAEDTGTEILASE*TDQSLSITVPPKMK Trigger: CTTCATTTTTGGAGGAACAGTTATGCTTAGACTTTGGTCAGTCCATTCACTTGCAAGTATTTCTGTACCAGTGTCCTCAGCTCTCACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGTCTCCCCTCCTGCAGTaGGAGCTGAGGACACTGGTA | + |
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Preference number: 2 (lower is better) Translates to: KEWPRGPTAGAFPSSRATSPLLQ*ELRTLV Trigger: TACCAGTGTCCTCAGCTCTCACTGCAGGAGGGGAGA...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGGTGAACACTGGGCTGTaGAAAGCAGAGGTGCCGTCA | + |
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Preference number: 2 (lower is better) Translates to: KEWPRGPTAGAFPSSRATVNTGL*KAEVPS Trigger: TGACGGCACCTCTGCTTTGCACAGCCCAGTGTTCAC...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGAATGTGGTTCCACAGTaGCTGCCTTGCAATGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: KEWPRGPTAGAFPSSRATNVVPQ*LPCNVR Trigger: CCTGACATTGCAAGGCAGGCACTGTGGAACCACATT...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGTTTTGGTGGAGGCCCTaGCACGGAACTCACTATGTA | + |
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Preference number: 2 (lower is better) Translates to: KEWPRGPTAGAFPSSRATFWWRP*HGTHYV Trigger: TACATAGTGAGTTCCGTGCCAGGGCCTCCACCAAAA...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGGTACACAGCCAGAGTTaGATCGATTTGCAAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KEWPRGPTAGAFPSSRATVHSQS*IDLQAS Trigger: AGAGGCTTGCAAATCGATTCAACTCTGGCTGTGTAC...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGACTGATTTAATATTTTaGTGGAGGCCCTGGCACGGA | + |
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Preference number: 2 (lower is better) Translates to: KEWPRGPTAGAFPSSRATTDLIF*WRPWHG Trigger: TCCGTGCCAGGGCCTCCACCAAAATATTAAATCAGT...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGCACCAAAATTTGCAATaGCAAAGCCTAATCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: KEWPRGPTAGAFPSSRATHQNLQ*QSLILS Trigger: ACTGAGGATTAGGCTTTGTCATTGCAAATTTTGGTG...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTAGCGATTACCATTTCCCTCCCTCCTCCTACAGCAAAGTCCAGTACAGTAACAACAGAGACAGCTaGCTCAGCGCACTGCTTGCG | + |
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Preference number: 2 (lower is better) Translates to: ALSDYHFPPSSYSKVQYSNNRDS*LSALLA Trigger: CGCAAGCAGTGCGCTGAGGCAGCTGTCTCTGTTGTT...ACTGTACTGGACTTTGCTGTAGGAGGAGGGAGGGAAATGGTAATCGCTAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR GCA 90 bp | TACCTCACTAATGAGCACAGGAGGGTTACCTCACTAACCTCCTGCCACGGCATAGAATCCACCTGCCTCTaGCTGTCTCTACAGCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: YLTNEHRRVTSLTSCHGIESTCL*LSLQLG Trigger: TCCTAGCTGTAGAGACAGGCAGAGGCAGGTGGATTC...TATGCCGTGGCAGGAGGTTAGTGAGGTAACCCTCCTGTGCTCATTAGTGAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR CCA 90 bp | TACCTCACTAATGAGCACAGGAGGGTTACCTCACTAACCTCCTGCCACGGCATATCTGCTGGTGAACACTaGGCTGTGCAAAGCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: YLTNEHRRVTSLTSCHGISAGEH*AVQSRG Trigger: ACCTCTGCTTTGCACAGCCCAGTGTTCACCAGCAGA...TATGCCGTGGCAGGAGGTTAGTGAGGTAACCCTCCTGTGCTCATTAGTGAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTAGCGATTACCATTTCCCTCCCTCCTCCTACAGCAAAGTCCAGTACAGTTCCTGCAGTGAGAGCTaGGGACACTGGTACAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: ALSDYHFPPSSYSKVQYSSCSES*GHWYRN Trigger: ATTTCTGTACCAGTGTCCTCAGCTCTCACTGCAGGA...ACTGTACTGGACTTTGCTGTAGGAGGAGGGAGGGAAATGGTAATCGCTAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR TCA 90 bp | TACCTCACTAATGAGCACAGGAGGGTTACCTCACTAACCTCCTGCCACGGCATAATGCTCTGCCCATGTTaGCAGAGCAACTTTCCACTT | + |
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Preference number: 2 (lower is better) Translates to: YLTNEHRRVTSLTSCHGIMLCPC*QSNFPL Trigger: AAGTGGAAAGTTGCTCTGTCAACATGGGCAGAGCAT...TATGCCGTGGCAGGAGGTTAGTGAGGTAACCCTCCTGTGCTCATTAGTGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR GCA 90 bp | GCTCTTAGCGATTACCATTTCCCTCCCTCCTCCTACAGCAAAGTCCAGTACAGTACAGTGACATGCTATTaGAGCCCCACATTCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: ALSDYHFPPSSYSKVQYSTVTCY*SPTFWD Trigger: ATCCCAGAATGTGGGGCTGCAATAGCATGTCACTGT...ACTGTACTGGACTTTGCTGTAGGAGGAGGGAGGGAAATGGTAATCGCTAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGACAGAACGGAGTTCAGCCAAAGTGACCTTTGGTCATATTTTTCCCAGAATTGGTTCCACAGTGCCTaGCTTGCAATGTCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: MDRTEFSQSDLWSYFSQNWFHSA*LAMSGR Trigger: CCTGCCTGACATTGCAAGGCAGGCACTGTGGAACCA...ATTCTGGGAAAAATATGACCAAAGGTCACTTTGGCTGAACTCCGTTCTGTCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGACAGAACGGAGTTCAGCCAAAGTGACCTTTGGTCATATTTTTCCCAGAATCCTTTGTTCTGCTGGTaGACACTGGGCTGTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: MDRTEFSQSDLWSYFSQNPLFCW*TLGCAK Trigger: CTTTGCACAGCCCAGTGTTCACCAGCAGAACAAAGG...ATTCTGGGAAAAATATGACCAAAGGTCACTTTGGCTGAACTCCGTTCTGTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCACAGAAGAAACAGCCAGGGAACAGCCAGTCCAAAACCCAGCAAGGAAAACTATTTAACGCTTTTCTaGACACCTCCACAGGATAAG | + |
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Preference number: 2 (lower is better) Translates to: SHRRNSQGTASPKPSKENYLTLF*TPPQDK Trigger: CTTATCCTGTGGAGGTGTTCAGAAAAGCGTTAAATA...GTTTTCCTTGCTGGGTTTTGGACTGGCTGTTCCCTGGCTGTTTCTTCTGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR GCA 90 bp | GAGACACAATCCACCAAAGATCACAGCTCCTCCTCACGGTTAATACACAGCCTGCAAATTAGTATAGGCTaGTTCGTCAGAAATACGGTT | + |
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Preference number: 2 (lower is better) Translates to: ETQSTKDHSSSSRLIHSLQISIG*FVRNTV Trigger: AACCGTATTTCTGACGAAGCAGCCTATACTAATTTG...CAGGCTGTGTATTAACCGTGAGGAGGAGCTGTGATCTTTGGTGGATTGTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTAATGTGGTTCCACAGTGCCTGCCTTGCAATGTCAGGCAGGTAGCAGAAAAAATGATTTGTGCTTaGCTGCTACATTCATGCTTC | + |
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Preference number: 2 (lower is better) Translates to: FSNVVPQCLPCNVRQVAEKMICA*LLHSCF Trigger: GAAGCATGAATGTAGCAGCCAAGCACAAATCATTTT...TTCTGCTACCTGCCTGACATTGCAAGGCAGGCACTGTGGAACCACATTACTGAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGACAGAACGGAGTTCAGCCAAAGTGACCTTTGGTCATATTTTTCCCAGAATATTGGAATGTGGAAGTaGCTCTGCAAACAGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: MDRTEFSQSDLWSYFSQNIGMWK*LCKQRE Trigger: TTCCCTCTGTTTGCAGAGCCACTTCCACATTCCAAT...ATTCTGGGAAAAATATGACCAAAGGTCACTTTGGCTGAACTCCGTTCTGTCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR GCA 90 bp | AGTGGCTCTGCAAACAGAGGGAAAGACAAAGGCAGAGAATGCTTTTTCAGTAATTGCATAGAATCTGTCTaGTCCAGGGTTATCAATGTC | + |
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Preference number: 2 (lower is better) Translates to: SGSANRGKDKGRECFFSNCIESV*SRVINV Trigger: GACATTGATAACCCTGGAGCAGACAGATTCTATGCA...ATTACTGAAAAAGCATTCTCTGCCTTTGTCTTTCCCTCTGTTTGCAGAGCCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGACAGAACGGAGTTCAGCCAAAGTGACCTTTGGTCATATTTTTCCCAGAATATACTTGCAAGTGAATaGACTGACCAAAGTCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: MDRTEFSQSDLWSYFSQNILASE*TDQSLS Trigger: GCTTAGACTTTGGTCAGTCCATTCACTTGCAAGTAT...ATTCTGGGAAAAATATGACCAAAGGTCACTTTGGCTGAACTCCGTTCTGTCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGGCTCTGCAAACAGAGGGAAAGACAAAGGCAGAGAATGCTTTTTCAGTAATGACACTGAAGCAAAATaGAAGCTGAAAGGTATTTTG | + |
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Preference number: 2 (lower is better) Translates to: SGSANRGKDKGRECFFSNDTEAK*KLKGIL Trigger: CAAAATACCTTTCAGCTTTCATTTTGCTTCAGTGTC...ATTACTGAAAAAGCATTCTCTGCCTTTGTCTTTCCCTCTGTTTGCAGAGCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR CAA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGTCCTTGCTTCCCACCTaGACAGGCCCATCAACCTTA | + |
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Preference number: 3 (lower is better) Translates to: KEWPRGPTAGAFPSSRATSLLPT*TGPSTL Trigger: TAAGGTTGATGGGCCTGTCAAGGTGGGAAGCAAGGA...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR TCA 72 bp | GTCAGGCAGGTAGCAGAAACTACTGTTCTGACGCTGTaGCTCGCCTGGGGCAGGCTGGACACCCCTACCTCA | + |
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Preference number: 3 (lower is better) Translates to: VRQVAETTVLTL*LAWGRLDTPTS Trigger: TGAGGTAGGGGTGTCCAGCCTGCCCCAGGCGAGTCACAGCGTCAGAACAGTAGTTTCTGCTACCTGCCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR TCA 72 bp | AGTGTAAGCACCGAGATGCCTCCTTTGTTCTGCTGGTaGACACTGGGCTGTGCAAAGCAGAGGTGCCGTCAC | + |
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Preference number: 3 (lower is better) Translates to: SVSTEMPPLFCW*TLGCAKQRCRH Trigger: GTGACGGCACCTCTGCTTTGCACAGCCCAGTGTTCACCAGCAGAACAAAGGAGGCATCTCGGTGCTTACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR CCA 72 bp | AGCAGGTGCCTTTCCTTCTTCCAGAGCGACGAGCACTaGACACAGCCCAGTGACACTGTACTTAGGAAGCTC | + |
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Preference number: 3 (lower is better) Translates to: SRCLSFFQSDEH*TQPSDTVLRKL Trigger: GAGCTTCCTAAGTACAGTGTCACTGGGCTGTGTCCAGTGCTCGTCGCTCTGGAAGAAGGAAAGGCACCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR CCA 72 bp | TACTTAGGAAGCTCACCACAGAGGAGGGGACGTCTATaGACAGAACGGAGTTCAGCCAAAGTGACCTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: YLGSSPQRRGRL*TERSSAKVTFG Trigger: ACCAAAGGTCACTTTGGCTGAACTCCGTTCTGTCCATAGACGTCCCCTCCTCTGTGGTGAGCTTCCTAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR CAA 90 bp | ATGGACAGAACGGAGTTCAGCCAAAGTGACCTTTGGTCATATTTTTCCCAGAATTCCACAGTGCCTGCCTaGCAATGTCAGGCAGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: MDRTEFSQSDLWSYFSQNSTVPA*QCQAGS Trigger: GCTACCTGCCTGACATTGCAAGGCAGGCACTGTGGA...ATTCTGGGAAAAATATGACCAAAGGTCACTTTGGCTGAACTCCGTTCTGTCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR GCA 72 bp | GGCAGAGAATGCTTTTTCAGTAATGTGGTTCCACAGTaGCTGCCTTGCAATGTCAGGCAGGTAGCAGAAACT | + |
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Preference number: 3 (lower is better) Translates to: GRECFFSNVVPQ*LPCNVRQVAET Trigger: AGTTTCTGCTACCTGCCTGACATTGCAAGGCAGGCACTGTGGAACCACATTACTGAAAAAGCATTCTCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR CCA 72 bp | GGAAAGACAAAGGCAGAGAATGCTTTTTCAGTAATGTaGTTCCACAGTGCCTGCCTTGCAATGTCAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GKTKAENAFSVM*FHSACLAMSGR Trigger: CCTGCCTGACATTGCAAGGCAGGCACTGTGGAACCACATTACTGAAAAAGCATTCTCTGCCTTTGTCTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR CAA 90 bp | GCTCTTAGCGATTACCATTTCCCTCCCTCCTCCTACAGCAAAGTCCAGTACAGTCTCAGTTACTTTGGGTaGTTACAAGTAGGAAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: ALSDYHFPPSSYSKVQYSLSYFG*LQVGRG Trigger: TCCCCTTCCTACTTGTAACAACCCAAAGTAACTGAG...ACTGTACTGGACTTTGCTGTAGGAGGAGGGAGGGAAATGGTAATCGCTAAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR GCA 72 bp | GACCACTTCTCCCAGAAGTCACAAATTAGTATAGGCTaGTTCGTCAGAAATACGGTTAGCTCCTTGCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: DHFSQKSQISIG*FVRNTVSSLLP Trigger: GGGAAGCAAGGAGCTAACCGTATTTCTGACGAAGCAGCCTATACTAATTTGTGACTTCTGGGAGAAGTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR TCA 72 bp | TGCTTGCGAGAGGCAACCATAATGCTCTGCCCATGTTaGCAGAGCAACTTTCCACTTCTAACCAATTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: CLREATIMLCPC*QSNFPLLTNFV Trigger: CACAAAATTGGTTAGAAGTGGAAAGTTGCTCTGTCAACATGGGCAGAGCATTATGGTTGCCTCTCGCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR TCA 72 bp | TGCCACGGCATATGCCTTTGGCACCAAAATTTGCAATaGCAAAGCCTAATCCTCAGTTACTTTGGGTTGTTA | + |
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Preference number: 3 (lower is better) Translates to: CHGICLWHQNLQ*QSLILSYFGLL Trigger: TAACAACCCAAAGTAACTGAGGATTAGGCTTTGTCATTGCAAATTTTGGTGCCAAAGGCATATGCCGTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR TCA 72 bp | TGCTCCAGGGTTATCAATGTCTATTTAACGCTTTTCTaGACACCTCCACAGGATAAGTATCTCAGACCACTT | + |
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Preference number: 3 (lower is better) Translates to: CSRVINVYLTLF*TPPQDKYLRPL Trigger: AAGTGGTCTGAGATACTTATCCTGTGGAGGTGTTCAGAAAAGCGTTAAATAGACATTGATAACCCTGGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR GCA 72 bp | AATGATAGAAGGTACACAGCCAGAGTTGAATCGATTTaGAAGCCTCTACTTTCTTCTCACAGAAGAAACAGC | + |
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Preference number: 3 (lower is better) Translates to: NDRRYTARVESI*KPLLSSHRRNS Trigger: GCTGTTTCTTCTGTGAGAAGAAAGTAGAGGCTTGCAAATCGATTCAACTCTGGCTGTGTACCTTCTATCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR-3UTR CAA 90 bp | AGTGGCTCTGCAAACAGAGGGAAAGACAAAGGCAGAGAATGCTTTTTCAGTAATGCATTGTTAAGTGTTTaGGTAAGAAAAAGGCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: SGSANRGKDKGRECFFSNALLSV*VRKRLL Trigger: TAGGAGCCTTTTTCTTACCAAAACACTTAACAATGC...ATTACTGAAAAAGCATTCTCTGCCTTTGTCTTTCCCTCTGTTTGCAGAGCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CCA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGGAGTTCCAACTTCTGTaGAAGGGGTTGCCACCACCT | + |
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Preference number: 4 (lower is better) Translates to: KEWPRGPTAGAFPSSRATEFQLL*KGLPPP Trigger: AGGTGGTGGCAACCCCTTCCACAGAAGTTGGAACTC...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR TCA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGGCAAAACACCGCTTGTaGTCCTGGTCAAGTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KEWPRGPTAGAFPSSRATAKHRL*SWSSFR Trigger: TCTGAAACTTGACCAGGATCACAAGCGGTGTTTTGC...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR TCA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGTCTCATTTCTGGGTCTaGGAGGACTTCTTTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KEWPRGPTAGAFPSSRATSHFWV*EDFFSS Trigger: GCTGCTAAAGAAGTCCTCTCAGACCCAGAAATGAGA...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR GCA 90 bp | TTCAGTAATGTGGTTCCACAGTGCCTGCCTTGCAATGTCAGGCAGGTAGCAGAATCAGCGCCTTCGTACTaGAGGTCCACCAGGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: FSNVVPQCLPCNVRQVAESAPSY*RSTRTS Trigger: GCTGGTCCTGGTGGACCTGCAGTACGAAGGCGCTGA...TTCTGCTACCTGCCTGACATTGCAAGGCAGGCACTGTGGAACCACATTACTGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CCA 90 bp | TACCTCACTAATGAGCACAGGAGGGTTACCTCACTAACCTCCTGCCACGGCATACGGGCAGCGCTGCTTTaGATTTTCCCATGGCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLTNEHRRVTSLTSCHGIRAALL*IFPWLR Trigger: TCTTAGCCATGGGAAAATCCAAAGCAGCGCTGCCCG...TATGCCGTGGCAGGAGGTTAGTGAGGTAACCCTCCTGTGCTCATTAGTGAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR TCA 90 bp | GCTCTTAGCGATTACCATTTCCCTCCCTCCTCCTACAGCAAAGTCCAGTACAGTCCACCACCTCCTTGTTaGCTCTCTGCATCAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALSDYHFPPSSYSKVQYSPPPPC*LSASRG Trigger: TCCTCTTGATGCAGAGAGTCAACAAGGAGGTGGTGG...ACTGTACTGGACTTTGCTGTAGGAGGAGGGAGGGAAATGGTAATCGCTAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR GCA 90 bp | GAGACACAATCCACCAAAGATCACAGCTCCTCCTCACGGTTAATACACAGCCTGGCTTCCTTCTCCTCCTaGTCACTGGGGTTAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETQSTKDHSSSSRLIHSLASFSS*SLGLDL Trigger: CAAATCTAACCCCAGTGAGCAGGAGGAGAAGGAAGC...CAGGCTGTGTATTAACCGTGAGGAGGAGCTGTGATCTTTGGTGGATTGTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CCA 90 bp | GCTCTTAGCGATTACCATTTCCCTCCCTCCTCCTACAGCAAAGTCCAGTACAGTTGCTTCAGTAACCGCTaGGCTTTCTCTAAGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSDYHFPPSSYSKVQYSCFSNR*AFSKPS Trigger: GGAAGGCTTAGAGAAAGCCCAGCGGTTACTGAAGCA...ACTGTACTGGACTTTGCTGTAGGAGGAGGGAGGGAAATGGTAATCGCTAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR GCA 90 bp | TACCTCACTAATGAGCACAGGAGGGTTACCTCACTAACCTCCTGCCACGGCATATCCTTGTTGACTCTCTaGATCAAGAGGATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YLTNEHRRVTSLTSCHGISLLTL*IKRIFS Trigger: GGAGAAGATCCTCTTGATGCAGAGAGTCAACAAGGA...TATGCCGTGGCAGGAGGTTAGTGAGGTAACCCTCCTGTGCTCATTAGTGAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR TCA 90 bp | TCTCACAGAAGAAACAGCCAGGGAACAGCCAGTCCAAAACCCAGCAAGGAAAACGTTAAACCCTTGCCATaGGTTCCAACTTCTGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHRRNSQGTASPKPSKENVKPLP*VPTSVE Trigger: TTCCACAGAAGTTGGAACTCATGGCAAGGGTTTAAC...GTTTTCCTTGCTGGGTTTTGGACTGGCTGTTCCCTGGCTGTTTCTTCTGTGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR GCA 90 bp | TACCTCACTAATGAGCACAGGAGGGTTACCTCACTAACCTCCTGCCACGGCATATTCCCCAATTCAAGATaGTTCTCCACATCCGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: YLTNEHRRVTSLTSCHGIFPNSR*FSTSAF Trigger: AAATGCGGATGTGGAGAAGCATCTTGAATTGGGGAA...TATGCCGTGGCAGGAGGTTAGTGAGGTAACCCTCCTGTGCTCATTAGTGAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR GCA 90 bp | TCTCACAGAAGAAACAGCCAGGGAACAGCCAGTCCAAAACCCAGCAAGGAAAACAGCTCTCCTATAGTATaGGATATAGTTATCGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SHRRNSQGTASPKPSKENSSPIV*DIVIGV Trigger: GACCCCGATAACTATATCGCATACTATAGGAGAGCT...GTTTTCCTTGCTGGGTTTTGGACTGGCTGTTCCCTGGCTGTTTCTTCTGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR TCA 90 bp | ATGGACAGAACGGAGTTCAGCCAAAGTGACCTTTGGTCATATTTTTCCCAGAATCAAGCTTCCCTTGTTTaGGCAGTAGGTGACCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MDRTEFSQSDLWSYFSQNQASLV*AVGDLS Trigger: AGAGAGGTCACCTACTGCTCAAACAAGGGAAGCTTG...ATTCTGGGAAAAATATGACCAAAGGTCACTTTGGCTGAACTCCGTTCTGTCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR TCA 90 bp | GAGACACAATCCACCAAAGATCACAGCTCCTCCTCACGGTTAATACACAGCCTGCTCTGTTTTCATGACTaGTTCATATTTGCTGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETQSTKDHSSSSRLIHSLLCFHD*FIFAGC Trigger: GCAACCAGCAAATATGAATCAGTCATGAAAACAGAG...CAGGCTGTGTATTAACCGTGAGGAGGAGCTGTGATCTTTGGTGGATTGTGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR GCA 90 bp | TTCAGTAATGTGGTTCCACAGTGCCTGCCTTGCAATGTCAGGCAGGTAGCAGAATGGAAATTATCTGGATaGCACTGCAGTGCTAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSNVVPQCLPCNVRQVAEWKLSG*HCSANF Trigger: AAAGTTAGCACTGCAGTGGCATCCAGATAATTTCCA...TTCTGCTACCTGCCTGACATTGCAAGGCAGGCACTGTGGAACCACATTACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CCA 90 bp | AGTGGCTCTGCAAACAGAGGGAAAGACAAAGGCAGAGAATGCTTTTTCAGTAATTCCTTAGAGAAGCAGTaGCAGATCCTCTCCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSANRGKDKGRECFFSNSLEKQ*QILSFE Trigger: CTCGAAGGAGAGGATCTGCCACTGCTTCTCTAAGGA...ATTACTGAAAAAGCATTCTCTGCCTTTGTCTTTCCCTCTGTTTGCAGAGCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| 3UTR CAA 72 bp | CTGCTTGCGAGAGGCAACCATAATGCTCTGCCCATGTaGACAGAGCAACTTTCCACTTCTAACCAATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLARGNHNALPM*TEQLSTSNQFC Trigger: ACAAAATTGGTTAGAAGTGGAAAGTTGCTCTGTCAACATGGGCAGAGCATTATGGTTGCCTCTCGCAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR GCA 90 bp | TACCTCACTAATGAGCACAGGAGGGTTACCTCACTAACCTCCTGCCACGGCATAGACTTCTTTAGCAGCTaGTATGTCAATGAACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLTNEHRRVTSLTSCHGIDFFSS*YVNELF Trigger: AAAAAGTTCATTGACATAGCAGCTGCTAAAGAAGTC...TATGCCGTGGCAGGAGGTTAGTGAGGTAACCCTCCTGTGCTCATTAGTGAGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CCA 90 bp | GAGACACAATCCACCAAAGATCACAGCTCCTCCTCACGGTTAATACACAGCCTGCTTCATAATCCTGAATaGCTTCATCGTACATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ETQSTKDHSSSSRLIHSLLHNPE*LHRTFP Trigger: AGGAAATGTACGATGAAGCCATTCAGGATTATGAAG...CAGGCTGTGTATTAACCGTGAGGAGGAGCTGTGATCTTTGGTGGATTGTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR GCA 90 bp | AGTGGCTCTGCAAACAGAGGGAAAGACAAAGGCAGAGAATGCTTTTTCAGTAATAAGCCTTCCCGAATCTaGTGGTCATTTTCATTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSANRGKDKGRECFFSNKPSRI*WSFSLC Trigger: GCACAATGAAAATGACCAGCAGATTCGGGAAGGCTT...ATTACTGAAAAAGCATTCTCTGCCTTTGTCTTTCCCTCTGTTTGCAGAGCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR TCA 90 bp | AGTGGCTCTGCAAACAGAGGGAAAGACAAAGGCAGAGAATGCTTTTTCAGTAATCAGCTGCTATGTCAATaGACTTTTTCTCTGCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGSANRGKDKGRECFFSNQLLCQ*TFSLLF Trigger: AAAAAGCAGAGAAAAAGTTCATTGACATAGCAGCTG...ATTACTGAAAAAGCATTCTCTGCCTTTGTCTTTCCCTCTGTTTGCAGAGCCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS TCA 90 bp | AGCGCTTGGGAGCGCAGCCGCTGCATCTCGTCAGCTTTTACAAGCTaGGACTCGGCTTCCTTCTCCTCCTGCTCACTGGGGTTAGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SAWERSRCISSAFTS*DSASFSSCSLGLDL Trigger: CAAATCTAACCCCAGTGAGCAGGAGGAGAAGGAAGCCGAGTCTCAGCTTGTAAAAGCTGACGAGATGCAGCGGCTGCGCTCCCAAGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CAA 90 bp | AAGGAGTGGCCCCGTGGCCCCACAGCAGGTGCCTTTCCTTCTTCCAGAGCGACGTTCAGAGCATTCACATaGTCGGGCTCCATCTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: KEWPRGPTAGAFPSSRATFRAFT*SGSICK Trigger: TTTACAGATGGAGCCCGACAATGTGAATGCTCTGAA...CGTCGCTCTGGAAGAAGGAAAGGCACCTGCTGTGGGGCCACGGGGCCACTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS GCA 90 bp | TCGGCTAGCTGTCCGGCTGCGAGTAATTTCTTCCCCAATTCAAGATaGTTCTCCACATCCGCATTTACTCCACACTCAGCGCCTTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SASCPAASNFFPNSR*FSTSAFTPHSAPSY Trigger: GTACGAAGGCGCTGAGTGTGGAGTAAATGCGGATGTGGAGAAGCATCTTGAATTGGGGAAGAAATTACTCGCAGCCGGACAGCTAGCCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS CCA 90 bp | CATATCCTAATGGCTTCCACGGGCTTCTCATCCTTAGAGAAGCAGTaGCAGATCCTCTCCTTCGAGCGCACTGTGTACTCAGCAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: HILMASTGFSSLEKQ*QILSFERTVYSATL Trigger: CAGTGTTGCTGAGTACACAGTGCGCTCGAAGGAGAGGATCTGCCACTGCTTCTCTAAGGATGAGAAGCCCGTGGAAGCCATTAGGATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CAA 90 bp | TTCAGTAATGTGGTTCCACAGTGCCTGCCTTGCAATGTCAGGCAGGTAGCAGAAGCCACCACCTCCTTGTaGACTCTCTGCATCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSNVVPQCLPCNVRQVAEATTSL*TLCIKR Trigger: CCTCTTGATGCAGAGAGTCAACAAGGAGGTGGTGGC...TTCTGCTACCTGCCTGACATTGCAAGGCAGGCACTGTGGAACCACATTACTGAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CAA 90 bp | TACCTCACTAATGAGCACAGGAGGGTTACCTCACTAACCTCCTGCCACGGCATATGTCACTCTTCAGCTTaGAAGCAGCCTTTAAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: YLTNEHRRVTSLTSCHGICHSSA*KQPLSR Trigger: GCGACTTAAAGGCTGCTTCAAAGCTGAAGAGTGACA...TATGCCGTGGCAGGAGGTTAGTGAGGTAACCCTCCTGTGCTCATTAGTGAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS TCA 90 bp | AAATCGTCTTCTGCTTCGTCAAGCTTCCCTTGTTTGAGCAGTAGGTaGCCTCTCTGTAGTCTTGCGGCAGTAAAGTCCATCTTCAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSSSASSSFPCLSSR*PLCSLAAVKSIFSA Trigger: TGCGCTGAAGATGGACTTTACTGCCGCAAGACTACAGAGAGGTCACCTACTGCTCAAACAAGGGAAGCTTGACGAAGCAGAAGACGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS TCA 90 bp | CATGAGTTCCAACTTCTGTGGAAGGGGTTGCCACCACCTCCTTGTTaGCTCTCTGCATCAAGAGGATCTTCTCCATCATCAAACTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: HEFQLLWKGLPPPPC*LSASRGSSPSSNFF Trigger: AAAGAAGTTTGATGATGGAGAAGATCCTCTTGATGCAGAGAGTCAACAAGGAGGTGGTGGCAACCCCTTCCACAGAAGTTGGAACTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS GCA 90 bp | CCAACTTCTGTGGAAGGGGTTGCCACCACCTCCTTGTTGACTCTCTaGATCAAGAGGATCTTCTCCATCATCAAACTTCTTTCTCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTSVEGVATTSLLTL*IKRIFSIIKLLSHF Trigger: GAAATGAGAAAGAAGTTTGATGATGGAGAAGATCCTCTTGATGCAGAGAGTCAACAAGGAGGTGGTGGCAACCCCTTCCACAGAAGTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CAA 90 bp | TCTCACAGAAGAAACAGCCAGGGAACAGCCAGTCCAAAACCCAGCAAGGAAAACGATTTGAGCACTTTCTaGAAATCGTCTTCTGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SHRRNSQGTASPKPSKENDLSTF*KSSSAS Trigger: CGAAGCAGAAGACGATTTCAAGAAAGTGCTCAAATC...GTTTTCCTTGCTGGGTTTTGGACTGGCTGTTCCCTGGCTGTTTCTTCTGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CAA 90 bp | ATGGACAGAACGGAGTTCAGCCAAAGTGACCTTTGGTCATATTTTTCCCAGAATGTTGCCACCACCTCCTaGTTGACTCTCTGCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MDRTEFSQSDLWSYFSQNVATTS*LTLCIK Trigger: CTTGATGCAGAGAGTCAACAAGGAGGTGGTGGCAAC...ATTCTGGGAAAAATATGACCAAAGGTCACTTTGGCTGAACTCCGTTCTGTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS TCA 90 bp | GCTGGTTGCATCTGTGTATCTGCCATCTCGGATCAGCTCTTCAGCTaGCTCAATCAGCTTGTTAAGTTTCTTCACTTGCTTATAGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGCICVSAISDQLFS*LNQLVKFLHLLIVC Trigger: GCACACTATAAGCAAGTGAAGAAACTTAACAAGCTGATTGAGTCAGCTGAAGAGCTGATCCGAGATGGCAGATACACAGATGCAACCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CAA 90 bp | GAGACACAATCCACCAAAGATCACAGCTCCTCCTCACGGTTAATACACAGCCTGATGACTGATTCATATTaGCTGGTTGCATCTGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ETQSTKDHSSSSRLIHSLMTDSY*LVASVY Trigger: ATACACAGATGCAACCAGCAAATATGAATCAGTCAT...CAGGCTGTGTATTAACCGTGAGGAGGAGCTGTGATCTTTGGTGGATTGTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS-3UTR CAA 90 bp | AGTGGCTCTGCAAACAGAGGGAAAGACAAAGGCAGAGAATGCTTTTTCAGTAATGCTGACTCAATCAGCTaGTTAAGTTTCTTCACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SGSANRGKDKGRECFFSNADSIS*LSFFTC Trigger: GCAAGTGAAGAAACTTAACAAGCTGATTGAGTCAGC...ATTACTGAAAAAGCATTCTCTGCCTTTGTCTTTCCCTCTGTTTGCAGAGCCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS TCA 72 bp | GAGCGCAGCCGCTGCATCTCGTCAGCTTTTACAAGCTaGGACTCGGCTTCCTTCTCCTCCTGCTCACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ERSRCISSAFTS*DSASFSSCSLG Trigger: CCCCAGTGAGCAGGAGGAGAAGGAAGCCGAGTCTCAGCTTGTAAAAGCTGACGAGATGCAGCGGCTGCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS CAA 90 bp | GGTTATAGCAGCAGTGTAATCGGCACCGTCAAAGGCGTCGAGCGCTaGGGAGCGCAGCCGCTGCATCTCGTCAGCTTTTACAAGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: GYSSSVIGTVKGVER*GAQPLHLVSFYKLR Trigger: TCTCAGCTTGTAAAAGCTGACGAGATGCAGCGGCTGCGCTCCCAAGCGCTCGACGCCTTTGACGGTGCCGATTACACTGCTGCTATAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS CCA 72 bp | ATGGCTTCCACGGGCTTCTCATCCTTAGAGAAGCAGTaGCAGATCCTCTCCTTCGAGCGCACTGTGTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: MASTGFSSLEKQ*QILSFERTVYS Trigger: TGAGTACACAGTGCGCTCGAAGGAGAGGATCTGCCACTGCTTCTCTAAGGATGAGAAGCCCGTGGAAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS CAA 72 bp | AGCGCAATCACTTTGGTGAGGTCGGGCAGCGCTGCTTaGGATTTTCCCATGGCTAAGAAGACGGTAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SAITLVRSGSAA*DFPMAKKTVAL Trigger: GAGAGCTACCGTCTTCTTAGCCATGGGAAAATCCAAAGCAGCGCTGCCCGACCTCACCAAAGTGATTGCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS CAA 90 bp | CTCTGTAGTCTTGCGGCAGTAAAGTCCATCTTCAGCGCAATCACTTaGGTGAGGTCGGGCAGCGCTGCTTTGGATTTTCCCATGGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LCSLAAVKSIFSAIT*VRSGSAALDFPMAK Trigger: CTTAGCCATGGGAAAATCCAAAGCAGCGCTGCCCGACCTCACCAAAGTGATTGCGCTGAAGATGGACTTTACTGCCGCAAGACTACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS TCA 72 bp | TCTGCTTCGTCAAGCTTCCCTTGTTTGAGCAGTAGGTaGCCTCTCTGTAGTCTTGCGGCAGTAAAGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SASSSFPCLSSR*PLCSLAAVKSI Trigger: GATGGACTTTACTGCCGCAAGACTACAGAGAGGTCACCTACTGCTCAAACAAGGGAAGCTTGACGAAGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS GCA 72 bp | TGTCCGGCTGCGAGTAATTTCTTCCCCAATTCAAGATaGTTCTCCACATCCGCATTTACTCCACACTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: CPAASNFFPNSR*FSTSAFTPHSA Trigger: CGCTGAGTGTGGAGTAAATGCGGATGTGGAGAAGCATCTTGAATTGGGGAAGAAATTACTCGCAGCCGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS GCA 72 bp | GTGGAAGGGGTTGCCACCACCTCCTTGTTGACTCTCTaGATCAAGAGGATCTTCTCCATCATCAAACTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VEGVATTSLLTL*IKRIFSIIKLL Trigger: AAGAAGTTTGATGATGGAGAAGATCCTCTTGATGCAGAGAGTCAACAAGGAGGTGGTGGCAACCCCTTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS CAA 72 bp | TCGGCTTCCTTCTCCTCCTGCTCACTGGGGTTAGATTaGAGCACTTTCTTGAAATCGTCTTCTGCTTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SASFSSCSLGLD*STFLKSSSASS Trigger: TGACGAAGCAGAAGACGATTTCAAGAAAGTGCTCAAATCTAACCCCAGTGAGCAGGAGGAGAAGGAAGCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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| CDS CAA 72 bp | TCCTCCTGCTCACTGGGGTTAGATTTGAGCACTTTCTaGAAATCGTCTTCTGCTTCGTCAAGCTTCCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSCSLGLDLSTF*KSSSASSSFPC Trigger: ACAAGGGAAGCTTGACGAAGCAGAAGACGATTTCAAGAAAGTGCTCAAATCTAACCCCAGTGAGCAGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022734.9 |
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