Pregenerated sensors for DNAJC28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039763Ensembl transcript IDs: ENSMUST00000049244.10, ENSMUST00000133731.2, ENSMUST00000143058.2, ENSMUST00000169982.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACCTGAAGTCTGGCGCCGGAGCCTGCTCCTTCAGGGGCAGGGTCTaGCTCTTACTACATCATTACAGCAGAACTCACCCAAGTTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: YLKSGAGACSFRGRV*LLLHHYSRTHPSFS Trigger: TGAGAAACTTGGGTGAGTTCTGCTGTAATGATGTAGTAAGAGGCAGACCCTGCCCCTGAAGGAGCAGGCTCCGGCGCCAGACTTCAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR CCA 90 bp | TCTCCACTCTGCTCTGGAAATAGGTCAGCTCCTTTCTGCACACTTTaGCTTCCTTCTGGGGACCCGATTCTGTGCCCAAAGCAATTAGCC | + |
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Preference number: 1 (lower is better) Translates to: SPLCSGNRSAPFCTL*LPSGDPILCPKQLA Trigger: GGCTAATTGCTTTGGGCACAGAATCGGGTCCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCTATTTCCAGAGCAGAGTGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR CCA 90 bp | TTCAGAACTTCTAAATCAATCAGTTTAACTGACTTCTGTGGCCAGTaGGTCACAGTTAGCCTACCTACTTGCCCTTTTCTTTGTCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: FRTSKSISLTDFCGQ*VTVSLPTCPFLCPV Trigger: CACTGGACAAAGAAAAGGGCAAGTAGGTAGGCTAACTGTGACCCACTGGCCACAGAAGTCAGTTAAACTGATTGATTTAGAAGTTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR TCA 90 bp | CCATGGCACTTAAGCAAGGTTTATGGGAACCTACAATATAGCTGGTaGCCAGAGAAGAAACTACTAACTAGTGAACTTTTACCTTTGTAT | + |
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Preference number: 1 (lower is better) Translates to: PWHLSKVYGNLQYSW*PEKKLLTSELLPLY Trigger: ATACAAAGGTAAAAGTTCACTAGTTAGTAGTTTCTTCTCTGGTCACCAGCTATATTGTAGGTTCCCATAAACCTTGCTTAAGTGCCATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR TCA 90 bp | GAGAAGAAACTACTAACTAGTGAACTTTTACCTTTGTATAGCTGGTaGCCAGAGAAGAAACTGCTAGTGAACTTTTACCTTTGTATTGTT | + |
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Preference number: 1 (lower is better) Translates to: EKKLLTSELLPLYSW*PEKKLLVNFYLCIV Trigger: AACAATACAAAGGTAAAAGTTCACTAGCAGTTTCTTCTCTGGTCACCAGCTATACAAAGGTAAAAGTTCACTAGTTAGTAGTTTCTTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCAGCTCCTTTCTGCACACTTTGGCTTCCTTCTGGGGACCCGATTCTGTGCTGCACACTGGATCCCTaGAGCTGGAGTTACAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: RSAPFCTLWLPSGDPILCCTLDP*SWSYRQ Trigger: CTGCCTGTAACTCCAGCTCCAGGGATCCAGTGTGCA...GCACAGAATCGGGTCCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTACAGTGATCGGGAGCCAGAGCTCTTAGCACAAAGCCATACTCCACGCTGCACTTTGGCTTCCTTCTaGGGACCCGATTCTGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SYSDREPELLAQSHTPRCTLASF*GPDSVP Trigger: GGGCACAGAATCGGGTCCCCAGAAGGAAGCCAAAGT...GCAGCGTGGAGTATGGCTTTGTGCTAAGAGCTCTGGCTCCCGATCACTGTAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTACCTACTTGCCCTTTTCTTTGTCCAGTGCCCACAGGGAAGGCCTTTGTATGTCTCAGAGAGCTCTaGGGTTTCTGGAAGGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: SLPTCPFLCPVPTGKAFVCLREL*GFWKAL Trigger: TAGGGCCTTCCAGAAACCTCAGAGCTCTCTGAGACA...TACAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGTAGGTAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTACAGTGATCGGGAGCCAGAGCTCTTAGCACAAAGCCATACTCCACGCTGCCACCTAGCAGGTGTTTaGAAAGCCTTCCCACAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SYSDREPELLAQSHTPRCHLAGV*KAFPQF Trigger: AAACTGTGGGAAGGCTTTTCAAACACCTGCTAGGTG...GCAGCGTGGAGTATGGCTTTGTGCTAAGAGCTCTGGCTCCCGATCACTGTAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTCAGCTCCTTTCTGCACACTTTGGCTTCCTTCTGGGGACCCGATTCTGTGCCCTTTGTATAGCTGGTaGCCAGAGAAGAAACTGCTA | + |
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Preference number: 2 (lower is better) Translates to: RSAPFCTLWLPSGDPILCPLYSW*PEKKLL Trigger: TAGCAGTTTCTTCTCTGGTCACCAGCTATACAAAGG...GCACAGAATCGGGTCCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCTCTGGAAATAGGTCAGCTCCTTTCTGCACACTTTGGCTTCCTTCTGGGGCTTTTCTTTGTCCAGTaGCCACAGGGAAGGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SALEIGQLLSAHFGFLLGLFFVQ*PQGRPL Trigger: CAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAG...CCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCTATTTCCAGAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTACAGTGATCGGGAGCCAGAGCTCTTAGCACAAAGCCATACTCCACGCTGCGGATGTTGGCTTCTTTaGTGTTTTGACCACTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: SYSDREPELLAQSHTPRCGCWLL*CFDHCR Trigger: TCTGCAGTGGTCAAAACATCAAAGAAGCCAACATCC...GCAGCGTGGAGTATGGCTTTGTGCTAAGAGCTCTGGCTCCCGATCACTGTAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCGTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTGAAGACTCTCACCCTCTaGGCAGTTTCTCCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: PSSKQKGPNFLLRMLASLKTLTL*AVSPAP Trigger: AGGGGCTGGAGAAACTGCCCAGAGGGTGAGAGTCTT...CAAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGACGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGTTACAGGCAGTTGTGAGCCACCTGACTAGGATGCTGGTCCTCTGCAGGTTTGGAGACCACAGTTaGTTAAATCTCATTACAACT | + |
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Preference number: 2 (lower is better) Translates to: LELQAVVSHLTRMLVLCRFGDHS*LNLITT Trigger: AGTTGTAATGAGATTTAACCAACTGTGGTCTCCAAA...CCTGCAGAGGACCAGCATCCTAGTCAGGTGGCTCACAACTGCCTGTAACTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTGGAAGACTCTCACCCTCTaGGCAGTTTCTCCAGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: LDKLPKGLFVVFQRGISWKTLTL*AVSPAP Trigger: AGGGGCTGGAGAAACTGCCCAGAGGGTGAGAGTCTT...CCAACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTGGTGTCTCAGAGAGCTCTaGGGTTTCTGGAAGGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: LDKLPKGLFVVFQRGISWCLREL*GFWKAL Trigger: TAGGGCCTTCCAGAAACCTCAGAGCTCTCTGAGACA...CCAACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTGGAGGATGCTGGTCCTCTaGAGGAGCAGCAAAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LDKLPKGLFVVFQRGISWRMLVL*RSSKEQ Trigger: TTGCTCTTTGCTGCTCCTGCAGAGGACCAGCATCCT...CCAACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGAAGATTCTTCCACTCCATGTTCACTCCAGACTCTCAGTTTTAAAGCAAGCAGGATGCTGGTCCTCTaGAGGAGCAGCAAAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: TEDSSTPCSLQTLSFKASRMLVL*RSSKEQ Trigger: TTGCTCTTTGCTGCTCCTGCAGAGGACCAGCATCCT...GCTTGCTTTAAAACTGAGAGTCTGGAGTGAACATGGAGTGGAAGAATCTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR GCA 90 bp | CCCATCGTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTAGGTCAGCTCCTTTCTaGACACTTTGGCTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: PIVKAERAQLSFEDVGFFRSAPF*TLWLPS Trigger: AGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCT...AAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGACGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTGATGTTTGTGTGTGTGCACACTaGATCCCTGGAGCTGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: VKAERAQLSFEDVGFFDVCVCAH*IPGAGV Trigger: AACTCCAGCTCCAGGGATCCAGTGTGCACACACACA...AACATCAAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCTACCTACTTGCCCTTTTCTTTGTCCAGTGCCCACAGGGAAGGCCTTTGTAACCTTTTGGTTTCATTaGTGCTTAAGTCCTTATGGT | + |
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Preference number: 2 (lower is better) Translates to: SLPTCPFLCPVPTGKAFVTFWFH*CLSPYG Trigger: ACCATAAGGACTTAAGCAGCAATGAAACCAAAAGGT...TACAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGTAGGTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTACCTACTTGCCCTTTTCTTTGTCCAGTGCCCACAGGGAAGGCCTTTGTAAGCTTTAATAAGCTCTaGAATATACCAGAGGAAACC | + |
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Preference number: 2 (lower is better) Translates to: SLPTCPFLCPVPTGKAFVSFNKL*NIPEET Trigger: GGTTTCCTCTGGTATATTCCAGAGCTTATTAAAGCT...TACAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGTAGGTAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCGTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTGCCTTTGTATAGCTGGTaGCCAGAGAAGAAACTACTA | + |
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Preference number: 2 (lower is better) Translates to: PSSKQKGPNFLLRMLASLPLYSW*PEKKLL Trigger: TAGTAGTTTCTTCTCTGGTCACCAGCTATACAAAGG...CAAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGACGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTGCCCTTTTCTTTGTCCAGTGCCCACAGGGAAGGCCTTTGTAAATACAGGAATACCAGAGGAAACCTaGAAAAACTACCTGTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TCPFLCPVPTGKAFVNTGIPEET*KNYLLS Trigger: AGACAACAGGTAGTTTTTGCAGGTTTCCTCTGGTAT...TCCTGTATTTACAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTACCTACTTGCCCTTTTCTTTGTCCAGTGCCCACAGGGAAGGCCTTTGTATTTGGAGACCACAGTTaGTTAAATCTCATTACAACT | + |
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Preference number: 2 (lower is better) Translates to: SLPTCPFLCPVPTGKAFVFGDHS*LNLITT Trigger: AGTTGTAATGAGATTTAACCAACTGTGGTCTCCAAA...TACAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGTAGGTAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGAAGATTCTTCCACTCCATGTTCACTCCAGACTCTCAGTTTTAAAGCAAGCATCAATCAGTTTAACTaGCTTCTGTGGCCAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TEDSSTPCSLQTLSFKASINQFN*LLWPVG Trigger: ACCCACTGGCCACAGAAGTCAGTTAAACTGATTGAT...GCTTGCTTTAAAACTGAGAGTCTGGAGTGAACATGGAGTGGAAGAATCTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR CAA 90 bp | CAGAGGAAACCTGCAAAAACTACCTGTTGTCTGGAGATCTTTAATTaGTTACATGTGTGTGCACATGCGTATGTGTGCACATGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QRKPAKTTCCLEIFN*LHVCAHAYVCTCVC Trigger: ACACACACATGTGCACACATACGCATGTGCACACACATGTAACAAATTAAAGATCTCCAGACAACAGGTAGTTTTTGCAGGTTTCCTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTGGCTACAATATAGCTGGTaGCCAGAGAAGAAACTACTA | + |
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Preference number: 2 (lower is better) Translates to: LDKLPKGLFVVFQRGISWLQYSW*PEKKLL Trigger: TAGTAGTTTCTTCTCTGGTCACCAGCTATATTGTAG...CCAACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR TCA 90 bp | TCATGTATAACACTGAAGATTCTTCCACTCCATGTTCACTCCAGACTCTCAGTTCTACAATATAGCTGGTaGCCAGAGAAGAAACTACTA | + |
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Preference number: 2 (lower is better) Translates to: SCITLKILPLHVHSRLSVLQYSW*PEKKLL Trigger: TAGTAGTTTCTTCTCTGGTCACCAGCTATATTGTAG...AACTGAGAGTCTGGAGTGAACATGGAGTGGAAGAATCTTCAGTGTTATACATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR GCA 90 bp | GTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTGATGTTACCTTTTGGTTTCATTaGTGCTTAAGTCCTTATGGT | + |
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Preference number: 2 (lower is better) Translates to: VKAERAQLSFEDVGFFDVTFWFH*CLSPYG Trigger: ACCATAAGGACTTAAGCAGCAATGAAACCAAAAGGT...AACATCAAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR GCA 72 bp | TCTGGCGCCGGAGCCTGCTCCTTCAGGGGCAGGGTCTaGCTCTTACTACATCATTACAGCAGAACTCACCCA | + |
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Preference number: 3 (lower is better) Translates to: SGAGACSFRGRV*LLLHHYSRTHP Trigger: TGGGTGAGTTCTGCTGTAATGATGTAGTAAGAGGCAGACCCTGCCCCTGAAGGAGCAGGCTCCGGCGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR CCA 72 bp | TCTCAGAGAGCTCTGAGGTTTCTGGAAGGCCCTATGTaGGCCTCGGGTCTGTGCTTCAGTCCTAGAGGCCGA | + |
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Preference number: 3 (lower is better) Translates to: SQRALRFLEGPM*ASGLCFSPRGR Trigger: TCGGCCTCTAGGACTGAAGCACAGACCCGAGGCCCACATAGGGCCTTCCAGAAACCTCAGAGCTCTCTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR GCA 72 bp | GCAGTTGTGAGCCACCTGACTAGGATGCTGGTCCTCTaGAGGAGCAGCAAAGAGCAAAGACTCTCACCCTCT | + |
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Preference number: 3 (lower is better) Translates to: AVVSHLTRMLVL*RSSKEQRLSPS Trigger: AGAGGGTGAGAGTCTTTGCTCTTTGCTGCTCCTGCAGAGGACCAGCATCCTAGTCAGGTGGCTCACAACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR TCA 72 bp | CCCTGGGGCACGACAGTCAATCTTAGGTTCTGCGTCTaGCGTCAGAGCAACTCAAAACTGACCAGAGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: PWGTTVNLRFCV*RQSNSKLTRVE Trigger: TTCCACTCTGGTCAGTTTTGAGTTGCTCTGACGTCAGACGCAGAACCTAAGATTGACTGTCGTGCCCCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR GCA 72 bp | TCTCCACTCTGCTCTGGAAATAGGTCAGCTCCTTTCTaGACACTTTGGCTTCCTTCTGGGGACCCGATTCTG | + |
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Preference number: 3 (lower is better) Translates to: SPLCSGNRSAPF*TLWLPSGDPIL Trigger: CAGAATCGGGTCCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCTATTTCCAGAGCAGAGTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR CCA 72 bp | TGCTCTGGAAATAGGTCAGCTCCTTTCTGCACACTTTaGCTTCCTTCTGGGGACCCGATTCTGTGCCCAAAG | + |
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Preference number: 3 (lower is better) Translates to: CSGNRSAPFCTL*LPSGDPILCPK Trigger: CTTTGGGCACAGAATCGGGTCCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCTATTTCCAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTACAGTGATCGGGAGCCAGAGCTCTTAGCACAAAGCCATACTCCACGCTGCGGGCCCAACTTTCTTTaGAGGATGTTGGCTTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: SYSDREPELLAQSHTPRCGPNFL*RMLASL Trigger: CAAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCC...GCAGCGTGGAGTATGGCTTTGTGCTAAGAGCTCTGGCTCCCGATCACTGTAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CAA 90 bp | CCCATCGTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTTCCTTTCTGCACACTTaGGCTTCCTTCTGGGGACCC | + |
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Preference number: 3 (lower is better) Translates to: PIVKAERAQLSFEDVGFFSFLHT*ASFWGP Trigger: GGGTCCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGA...AAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGACGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR CCA 72 bp | GGGATAAGTTGGGGGTTAACATTGTTGAACCATCTCTaGGGAGTCTGCTCTAGGACACCATGGCACTTAAGC | + |
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Preference number: 3 (lower is better) Translates to: GISWGLTLLNHL*GVCSRTPWHLS Trigger: GCTTAAGTGCCATGGTGTCCTAGAGCAGACTCCCCAGAGATGGTTCAACAATGTTAACCCCCAACTTATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCAAAGAGCAAAGACTCTCACCCTCTGGGCAGTTTCTCCAGCCCCTTTCTTACCTTTTGGTTTCATaGCTGCTTAAGTCCTTATGG | + |
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Preference number: 3 (lower is better) Translates to: SSKEQRLSPSGQFLQPLSYLLVS*LLKSLW Trigger: CCATAAGGACTTAAGCAGCAATGAAACCAAAAGGTA...AGAAAGGGGCTGGAGAAACTGCCCAGAGGGTGAGAGTCTTTGCTCTTTGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR TCA 72 bp | TTAAAGCAAGCATCACAGAATACCAGGCTCTTACAGTaGTCGGGAGCCAGAGCTCTTAGCACAAAGCCATAC | + |
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Preference number: 3 (lower is better) Translates to: LKQASQNTRLLQ*SGARALSTKPY Trigger: GTATGGCTTTGTGCTAAGAGCTCTGGCTCCCGATCACTGTAAGAGCCTGGTATTCTGTGATGCTTGCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR GCA 72 bp | TGGGGGTTAACATTGTTGAACCATCTCTGGGGAGTCTaGTCTAGGACACCATGGCACTTAAGCAAGGTTTAT | + |
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Preference number: 3 (lower is better) Translates to: WGLTLLNHLWGV*SRTPWHLSKVY Trigger: ATAAACCTTGCTTAAGTGCCATGGTGTCCTAGAGCAGACTCCCCAGAGATGGTTCAACAATGTTAACCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR-3UTR CAA 90 bp | GTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTGATGTTTACTTGCCCTTTTCTTaGTCCAGTGCCCACAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: VKAERAQLSFEDVGFFDVYLPFS*SSAHRE Trigger: TTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGTA...AACATCAAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR CCA 72 bp | TTGAACCATCTCTGGGGAGTCTGCTCTAGGACACCATaGCACTTAAGCAAGGTTTATGGGAACCTACAATAT | + |
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Preference number: 3 (lower is better) Translates to: LNHLWGVCSRTP*HLSKVYGNLQY Trigger: ATATTGTAGGTTCCCATAAACCTTGCTTAAGTGCCATGGTGTCCTAGAGCAGACTCCCCAGAGATGGTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| 3UTR CCA 72 bp | TCTAAATCAATCAGTTTAACTGACTTCTGTGGCCAGTaGGTCACAGTTAGCCTACCTACTTGCCCTTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SKSISLTDFCGQ*VTVSLPTCPFL Trigger: AAGAAAAGGGCAAGTAGGTAGGCTAACTGTGACCCACTGGCCACAGAAGTCAGTTAAACTGATTGATTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| 3UTR TCA 72 bp | CCAGAGCTCTTAGCACAAAGCCATACTCCACGCTGCTaGCAGTTTCCTTTAGTAATACATATAGTACTATCA | + |
|
Preference number: 3 (lower is better) Translates to: PELLAQSHTPRC*QFPLVIHIVLS Trigger: TGATAGTACTATATGTATTACTAAAGGAAACTGTCAGCAGCGTGGAGTATGGCTTTGTGCTAAGAGCTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATGTATAACACTGAAGATTCTTCCACTCCATGTTCACTCCAGACTCTCAGTTTCAGTTCTATACCTTTaGGTTTCATTGCTGCTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCITLKILPLHVHSRLSVSVLYL*VSLLLK Trigger: CTTAAGCAGCAATGAAACCAAAAGGTATAGAACTGA...AACTGAGAGTCTGGAGTGAACATGGAGTGGAAGAATCTTCAGTGTTATACATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| 3UTR-3UTR CAA 90 bp | TCATGTATAACACTGAAGATTCTTCCACTCCATGTTCACTCCAGACTCTCAGTTCTGGAGATCTTTAATTaGTTACATGTGTGTGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: SCITLKILPLHVHSRLSVLEIFN*LHVCAH Trigger: ATGTGCACACACATGTAACAAATTAAAGATCTCCAG...AACTGAGAGTCTGGAGTGAACATGGAGTGGAAGAATCTTCAGTGTTATACATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| 3UTR CCA 72 bp | TATACCAGAGGAAACCTGCAAAAACTACCTGTTGTCTaGAGATCTTTAATTTGTTACATGTGTGTGCACATG | + |
|
Preference number: 3 (lower is better) Translates to: YTRGNLQKLPVV*RSLICYMCVHM Trigger: CATGTGCACACACATGTAACAAATTAAAGATCTCCAGACAACAGGTAGTTTTTGCAGGTTTCCTCTGGTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| 3UTR TCA 72 bp | TTAAGCAAGGTTTATGGGAACCTACAATATAGCTGGTaGCCAGAGAAGAAACTACTAACTAGTGAACTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSKVYGNLQYSW*PEKKLLTSELL Trigger: TAAAAGTTCACTAGTTAGTAGTTTCTTCTCTGGTCACCAGCTATATTGTAGGTTCCCATAAACCTTGCTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGTTACAGGCAGTTGTGAGCCACCTGACTAGGATGCTGGTCCTCTGCAGGTGGGCCCACTGTTTCTaGTCTGTGGGTGACAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LELQAVVSHLTRMLVLCRWAHCF*SVGDRG Trigger: CCCTCTGTCACCCACAGAGCAGAAACAGTGGGCCCA...CCTGCAGAGGACCAGCATCCTAGTCAGGTGGCTCACAACTGCCTGTAACTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCCAGTGGGTCACAGTTAGCCTACCTACTTGCCCTTTTCTTTGTCCAGTGCTTTGCCATGGATTCCTaGATGAGGTCCTCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VASGSQLAYLLALFFVQCFAMDS*MRSSTR Trigger: CCTGGTGGAGGACCTCATTCAGGAATCCATGGCAAA...GCACTGGACAAAGAAAAGGGCAAGTAGGTAGGCTAACTGTGACCCACTGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTACCTACTTGCCCTTTTCTTTGTCCAGTGCCCACAGGGAAGGCCTTTGTATTTCTGCTCTGTGGGTaGCAGAGGGTTCCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLPTCPFLCPVPTGKAFVFLLCG*QRVPQL Trigger: AAGCTGGGGAACCCTCTGTCACCCACAGAGCAGAAA...TACAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGTAGGTAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGTTACAGGCAGTTGTGAGCCACCTGACTAGGATGCTGGTCCTCTGCAGGGACTCTGGGTGTTTTTaGTTCTTCTCCCTGGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LELQAVVSHLTRMLVLCRDSGCF*FFSLAN Trigger: GTTAGCCAGGGAGAAGAATCAAAAACACCCAGAGTC...CCTGCAGAGGACCAGCATCCTAGTCAGGTGGCTCACAACTGCCTGTAACTCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | TACCTGAAGTCTGGCGCCGGAGCCTGCTCCTTCAGGGGCAGGGTCTGCCTCTTAAGGATCCACTCTGGTTaGTATCCATTATCTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YLKSGAGACSFRGRVCLLRIHSG*YPLSIN Trigger: ATTGATAGATAATGGATACCAACCAGAGTGGATCCT...TAAGAGGCAGACCCTGCCCCTGAAGGAGCAGGCTCCGGCGCCAGACTTCAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAAAGAGCAAAGACTCTCACCCTCTGGGCAGTTTCTCCAGCCCCTTTCTCCTGGATCTGGGGTCTaGAAGCATTTTTATACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKEQRLSPSGQFLQPLSPGSGV*KHFYTR Trigger: CCTGGTATAAAAATGCTTTCAGACCCCAGATCCAGG...AGAAAGGGGCTGGAGAAACTGCCCAGAGGGTGAGAGTCTTTGCTCTTTGCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGCTCCTTTCTGCACACTTTGGCTTCCTTCTGGGGACCCGATTCTGTGCGTTTTCCTTTCCCGCTaGGATTGTCAAAGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSAPFCTLWLPSGDPILCVFLSR*DCQSLL Trigger: AAGGAGACTTTGACAATCTCAGCGGGAAAGGAAAAC...GCACAGAATCGGGTCCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGCCCTTTTCTTTGTCCAGTGCCCACAGGGAAGGCCTTTGTAAATACAGGATTTCTGCTCTGTGGGTaGCAGAGGGTTCCCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TCPFLCPVPTGKAFVNTGFLLCG*QRVPQL Trigger: AAGCTGGGGAACCCTCTGTCACCCACAGAGCAGAAA...TCCTGTATTTACAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGTTACAGGCAGTTGTGAGCCACCTGACTAGGATGCTGGTCCTCTGCAGGTCCGAGTGGTCTTCATaGACACTGTGTTTATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LELQAVVSHLTRMLVLCRSEWSS*TLCLSL Trigger: CAATGATAAACACAGTGTGCATGAAGACCACTCGGA...CCTGCAGAGGACCAGCATCCTAGTCAGGTGGCTCACAACTGCCTGTAACTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGTTACAGGCAGTTGTGAGCCACCTGACTAGGATGCTGGTCCTCTGCAGGTCAGGTTGTGAGTCATaGGATCAATATATGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LELQAVVSHLTRMLVLCRSGCES*DQYMSS Trigger: GCTGCTCATATATTGATCCCATGACTCACAACCTGA...CCTGCAGAGGACCAGCATCCTAGTCAGGTGGCTCACAACTGCCTGTAACTCCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTCCTTCAGGGGCAGGGTCTGCCTCTTACTACATCATTACAGCAGAACTCAGACTCTGGGTGTTTTTaGTTCTTCTCCCTGGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQGQGLPLTTSLQQNSDSGCF*FFSLAN Trigger: GTTAGCCAGGGAGAAGAATCAAAAACACCCAGAGTC...TGAGTTCTGCTGTAATGATGTAGTAAGAGGCAGACCCTGCCCCTGAAGGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | TCTTACAGTGATCGGGAGCCAGAGCTCTTAGCACAAAGCCATACTCCACGCTGCTCCTTAATCTCCTTCTaGATCAGGATCCACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SYSDREPELLAQSHTPRCSLISF*IRIHSG Trigger: ACCAGAGTGGATCCTGATGCAGAAGGAGATTAAGGA...GCAGCGTGGAGTATGGCTTTGTGCTAAGAGCTCTGGCTCCCGATCACTGTAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGTTACAGGCAGTTGTGAGCCACCTGACTAGGATGCTGGTCCTCTGCAGGTATTCTCTCAGCTTCTaGGATTCATGGGTTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: LELQAVVSHLTRMLVLCRYSLSF*DSWVDI Trigger: GATATCAACCCATGAATCCCAGAAGCTGAGAGAATA...CCTGCAGAGGACCAGCATCCTAGTCAGGTGGCTCACAACTGCCTGTAACTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGCTCCTTTCTGCACACTTTGGCTTCCTTCTGGGGACCCGATTCTGTGCAATGGACTTTCTGCCTaGTCAGGATGGGAACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: RSAPFCTLWLPSGDPILCNGLSA*SGWEQL Trigger: TAATTGTTCCCATCCTGACCAGGCAGAAAGTCCATT...GCACAGAATCGGGTCCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGTTACAGGCAGTTGTGAGCCACCTGACTAGGATGCTGGTCCTCTGCAGGGCCCCGTACATTTCTTaGACTCTGATAATTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LELQAVVSHLTRMLVLCRAPYIS*TLIISF Trigger: GAAAGAAATTATCAGAGTCCAAGAAATGTACGGGGC...CCTGCAGAGGACCAGCATCCTAGTCAGGTGGCTCACAACTGCCTGTAACTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGCTCCTTTCTGCACACTTTGGCTTCCTTCTGGGGACCCGATTCTGTGCTTCTTCATCTTCTGCTaGATCTTCAGCTTTATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSAPFCTLWLPSGDPILCFFIFC*IFSFIL Trigger: CAGGATAAAGCTGAAGATGCAGCAGAAGATGAAGAA...GCACAGAATCGGGTCCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| 3UTR CAA 72 bp | GTGTTCCAAAGAGGGATAAGTTGGGGGTTAACATTGTaGAACCATCTCTGGGGAGTCTGCTCTAGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: VFQRGISWGLTL*NHLWGVCSRTP Trigger: TGGTGTCCTAGAGCAGACTCCCCAGAGATGGTTCAACAATGTTAACCCCCAACTTATCCCTCTTTGGAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAGAGCAAAGACTCTCACCCTCTGGGCAGTTTCTCCAGCCCCTTTCTTTTTAGAAAGCCTGCCTTaGCTCTGGGTGTTTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: QQRAKTLTLWAVSPAPFFLESLP*LWVFLI Trigger: AATCAAAAACACCCAGAGTCAAGGCAGGCTTTCTAA...AAAGAAAGGGGCTGGAGAAACTGCCCAGAGGGTGAGAGTCTTTGCTCTTTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAAAGAGCAAAGACTCTCACCCTCTGGGCAGTTTCTCCAGCCCCTTTCTTTGTCAAAGTCTCCTTTTaGCATGGATTCCTGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQRAKTLTLWAVSPAPFFVKVSF*HGFLNE Trigger: CTCATTCAGGAATCCATGGCAAAAGGAGACTTTGAC...AAAGAAAGGGGCTGGAGAAACTGCCCAGAGGGTGAGAGTCTTTGCTCTTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTGGGCCCACTGTTTCTaGTCTGTGGGTGACAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILDKLPKGLFVVFQRGISWAHCF*SVGDRG Trigger: CCCTCTGTCACCCACAGAGCAGAAACAGTGGGCCCA...ACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAAAGAGCAAAGACTCTCACCCTCTGGGCAGTTTCTCCAGCCCCTTTCTTTAGCTTCTGGGATTCATaGGTTGATATCATCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QQRAKTLTLWAVSPAPFFSFWDS*VDIILD Trigger: ATCCAGGATGATATCAACCCATGAATCCCAGAAGCT...AAAGAAAGGGGCTGGAGAAACTGCCCAGAGGGTGAGAGTCTTTGCTCTTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTACCTACTTGCCCTTTTCTTTGTCCAGTGCCCACAGGGAAGGCCTTTGTATCAGGTTGTGAGTCATaGGATCAATATATGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPTCPFLCPVPTGKAFVSGCES*DQYMSS Trigger: GCTGCTCATATATTGATCCCATGACTCACAACCTGA...TACAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGTAGGTAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCCAGTGGGTCACAGTTAGCCTACCTACTTGCCCTTTTCTTTGTCCAGTGCCATCAGGATCCACTCTaGTTGGTATCCATTATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VASGSQLAYLLALFFVQCHQDPL*LVSIIY Trigger: ATAGATAATGGATACCAACCAGAGTGGATCCTGATG...GCACTGGACAAAGAAAAGGGCAAGTAGGTAGGCTAACTGTGACCCACTGGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTCCTTCAGGGGCAGGGTCTGCCTCTTACTACATCATTACAGCAGAACTCAAATGGACTTTCTGCCTaGTCAGGATGGGAACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQGQGLPLTTSLQQNSNGLSA*SGWEQL Trigger: TAATTGTTCCCATCCTGACCAGGCAGAAAGTCCATT...TGAGTTCTGCTGTAATGATGTAGTAAGAGGCAGACCCTGCCCCTGAAGGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCTCTGGAAATAGGTCAGCTCCTTTCTGCACACTTTGGCTTCCTTCTGGGGTGGCTAACGTCAGTTTaGTTTTCTTCTGTGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SALEIGQLLSAHFGFLLGWLTSV*FSSVTS Trigger: CGAAGTCACAGAAGAAAACCAAACTGACGTTAGCCA...CCCCAGAAGGAAGCCAAAGTGTGCAGAAAGGAGCTGACCTATTTCCAGAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAAAGAGCAAAGACTCTCACCCTCTGGGCAGTTTCTCCAGCCCCTTTCTTTTTTCGTATCTTTTCTTaGAACTGCTCACACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QQRAKTLTLWAVSPAPFFFRIFS*NCSHTW Trigger: CCAAGTGTGTGAGCAGTTTCAAGAAAAGATACGAAA...AAAGAAAGGGGCTGGAGAAACTGCCCAGAGGGTGAGAGTCTTTGCTCTTTGCTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCCAGTGGGTCACAGTTAGCCTACCTACTTGCCCTTTTCTTTGTCCAGTGCTTCTTCTTCATCTTCTaGTGCATCTTCAGCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: VASGSQLAYLLALFFVQCFFFIF*CIFSFI Trigger: GATAAAGCTGAAGATGCAGCAGAAGATGAAGAAGAA...GCACTGGACAAAGAAAAGGGCAAGTAGGTAGGCTAACTGTGACCCACTGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | TCTTACAGTGATCGGGAGCCAGAGCTCTTAGCACAAAGCCATACTCCACGCTGCAGGATCCACTCTGGTTaGTATCCATTATCTATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SYSDREPELLAQSHTPRCRIHSG*YPLSIN Trigger: ATTGATAGATAATGGATACCAACCAGAGTGGATCCT...GCAGCGTGGAGTATGGCTTTGTGCTAAGAGCTCTGGCTCCCGATCACTGTAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | TCATTACAGCAGAACTCACCCAAGTTTCTCATCTACCACCGGGGTGTGATTAGTTTCTGTGCGTCAAAATaGACTTTCTGCCTGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLQQNSPKFLIYHRGVISFCASK*TFCLVR Trigger: CCTGACCAGGCAGAAAGTCCATTTTGACGCACAGAA...ACTAATCACACCCCGGTGGTAGATGAGAAACTTGGGTGAGTTCTGCTGTAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | GTCCTTATGGTTAGAAAAGTCAAACAGCGACTACCTACCTATAAGTTGCTAGTGCGATCCGCCCTGAACTaGCTGTATTGTTTCTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLMVRKVKQRLPTYKLLVRSALN*LYCFSR Trigger: GCGAGAGAAACAATACAGGCAGTTCAGGGCGGATCG...CACTAGCAACTTATAGGTAGGTAGTCGCTGTTTGACTTTTCTAACCATAAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | TCATTACAGCAGAACTCACCCAAGTTTCTCATCTACCACCGGGGTGTGATTAGTTCCTTAATCTCCTTCTaGATCAGGATCCACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLQQNSPKFLIYHRGVISSLISF*IRIHSG Trigger: ACCAGAGTGGATCCTGATGCAGAAGGAGATTAAGGA...ACTAATCACACCCCGGTGGTAGATGAGAAACTTGGGTGAGTTCTGCTGTAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAATATACCAGAGGAAACCTGCAAAAACTACCTGTTGTCTGGAGATCTTAACTGCTCACACACTTaGGCCCACTGTTTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWNIPEETCKNYLLSGDLNCSHT*AHCFCS Trigger: AGAGCAGAAACAGTGGGCCCAAGTGTGTGAGCAGTT...AAGATCTCCAGACAACAGGTAGTTTTTGCAGGTTTCCTCTGGTATATTCCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGGAATATACCAGAGGAAACCTGCAAAAACTACCTGTTGTCTGGAGATCTTCCTGGATCTGGGGTCTaGAAGCATTTTTATACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LWNIPEETCKNYLLSGDLPGSGV*KHFYTR Trigger: CCTGGTATAAAAATGCTTTCAGACCCCAGATCCAGG...AAGATCTCCAGACAACAGGTAGTTTTTGCAGGTTTCCTCTGGTATATTCCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGCCCTTTTCTTTGTCCAGTGCCCACAGGGAAGGCCTTTGTAAATACAGGATTTCGTATCTTTTCTTaGAACTGCTCACACACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TCPFLCPVPTGKAFVNTGFRIFS*NCSHTW Trigger: CCAAGTGTGTGAGCAGTTTCAAGAAAAGATACGAAA...TCCTGTATTTACAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | CCCATCGTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTTTAGAAAGCCTGCCTTaGCTCTGGGTGTTTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PIVKAERAQLSFEDVGFFLESLP*LWVFLI Trigger: AATCAAAAACACCCAGAGTCAAGGCAGGCTTTCTAA...AAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGACGATGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTATGGTTAGAAAAGTCAAACAGCGACTACCTACCTATAAGTTGCTAGTGAACTGCTCACACACTTaGGCCCACTGTTTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLMVRKVKQRLPTYKLLVNCSHT*AHCFCS Trigger: AGAGCAGAAACAGTGGGCCCAAGTGTGTGAGCAGTT...CACTAGCAACTTATAGGTAGGTAGTCGCTGTTTGACTTTTCTAACCATAAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAATATACCAGAGGAAACCTGCAAAAACTACCTGTTGTCTGGAGATCTTTTCTGTGCGTCAAAATaGACTTTCTGCCTGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LWNIPEETCKNYLLSGDLFCASK*TFCLVR Trigger: CCTGACCAGGCAGAAAGTCCATTTTGACGCACAGAA...AAGATCTCCAGACAACAGGTAGTTTTTGCAGGTTTCCTCTGGTATATTCCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| 3UTR CAA 72 bp | AAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTaGGGGGTTAACATTGTTGAACCATCTCTGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGSLCCVPKRDK*GVNIVEPSLGS Trigger: ACTCCCCAGAGATGGTTCAACAATGTTAACCCCCAACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | TTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTGGGTTTTCCTTTCCCGCTaGGATTGTCAAAGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LDKLPKGLFVVFQRGISWVFLSR*DCQSLL Trigger: AAGGAGACTTTGACAATCTCAGCGGGAAAGGAAAAC...CCAACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | CCATCGTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTGATTCGGTTCAGGTTGTaGGTCATGGGATCAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSKQKGPNFLLRMLASLIRFRL*VMGSIY Trigger: ATATATTGATCCCATGACTCACAACCTGAACCGAAT...CAAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGACGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | TCATTACAGCAGAACTCACCCAAGTTTCTCATCTACCACCGGGGTGTGATTAGTATTCGGTTCAGGTTGTaGGTCATGGGATCAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: SLQQNSPKFLIYHRGVISIRFRL*VMGSIY Trigger: ATATATTGATCCCATGACTCACAACCTGAACCGAAT...ACTAATCACACCCCGGTGGTAGATGAGAAACTTGGGTGAGTTCTGCTGTAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | TATAAGTTGCTAGTGTCTCAGAGAGCTCTGAGGTTTCTGGAAGGCCCTATGTGGTTCTTCTTCATCTTCTaGTGCATCTTCAGCTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: YKLLVSQRALRFLEGPMWFFFIF*CIFSFI Trigger: GATAAAGCTGAAGATGCAGCAGAAGATGAAGAAGAA...CCACATAGGGCCTTCCAGAAACCTCAGAGCTCTCTGAGACACTAGCAACTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | CCATCGTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTGCATCAGGATCCACTCTaGTTGGTATCCATTATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PSSKQKGPNFLLRMLASLHQDPL*LVSIIY Trigger: ATAGATAATGGATACCAACCAGAGTGGATCCTGATG...CAAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGACGATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| 3UTR CAA 72 bp | GTTAGAAAAGTCAAACAGCGACTACCTACCTATAAGTaGCTAGTGTCTCAGAGAGCTCTGAGGTTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VRKVKQRLPTYK*LVSQRALRFLE Trigger: TTCCAGAAACCTCAGAGCTCTCTGAGACACTAGCAACTTATAGGTAGGTAGTCGCTGTTTGACTTTTCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | CCCATCGTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTCATGGGATCAATATATaGGCAGCCAGAAAATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PIVKAERAQLSFEDVGFFHGINI*AARKFL Trigger: AAGAAATTTTCTGGCTGCTCATATATTGATCCCATG...AAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGACGATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | TCATTACAGCAGAACTCACCCAAGTTTCTCATCTACCACCGGGGTGTGATTAGTCATGGGATCAATATATaGGCAGCCAGAAAATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLQQNSPKFLIYHRGVISHGINI*AARKFL Trigger: AAGAAATTTTCTGGCTGCTCATATATTGATCCCATG...ACTAATCACACCCCGGTGGTAGATGAGAAACTTGGGTGAGTTCTGCTGTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGATTCTTCCACTCCATGTTCACTCCAGACTCTCAGTTTTAAAGCAAGCGTCAAAGTCTCCTTTTaGCATGGATTCCTGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEDSSTPCSLQTLSFKASVKVSF*HGFLNE Trigger: CTCATTCAGGAATCCATGGCAAAAGGAGACTTTGAC...GCTTGCTTTAAAACTGAGAGTCTGGAGTGAACATGGAGTGGAAGAATCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | TCATGTATAACACTGAAGATTCTTCCACTCCATGTTCACTCCAGACTCTCAGTTTCAAAATGGACTTTCTaGCTGGTCAGGATGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SCITLKILPLHVHSRLSVSKWTF*LVRMGT Trigger: TGTTCCCATCCTGACCAGGCAGAAAGTCCATTTTGA...AACTGAGAGTCTGGAGTGAACATGGAGTGGAAGAATCTTCAGTGTTATACATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | GTCCTTATGGTTAGAAAAGTCAAACAGCGACTACCTACCTATAAGTTGCTAGTGTCAAAATGGACTTTCTaGCTGGTCAGGATGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VLMVRKVKQRLPTYKLLVSKWTF*LVRMGT Trigger: TGTTCCCATCCTGACCAGGCAGAAAGTCCATTTTGA...CACTAGCAACTTATAGGTAGGTAGTCGCTGTTTGACTTTTCTAACCATAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | CCATCGTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTGATATCATCCTGGATCTaGGGTCTGAAAGCATTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PSSKQKGPNFLLRMLASLISSWI*GLKAFL Trigger: TAAAAATGCTTTCAGACCCCAGATCCAGGATGATAT...CAAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGACGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | TTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTGGTGGCTAACGTCAGTTTaGTTTTCTTCTGTGACTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LDKLPKGLFVVFQRGISWWLTSV*FSSVTS Trigger: CGAAGTCACAGAAGAAAACCAAACTGACGTTAGCCA...CCAACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTTATGGTTAGAAAAGTCAAACAGCGACTACCTACCTATAAGTTGCTAGTGAGCTTCTGGGATTCATaGGTTGATATCATCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLMVRKVKQRLPTYKLLVSFWDS*VDIILD Trigger: ATCCAGGATGATATCAACCCATGAATCCCAGAAGCT...CACTAGCAACTTATAGGTAGGTAGTCGCTGTTTGACTTTTCTAACCATAAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | TTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTGGTATTCTCTCAGCTTCTaGGATTCATGGGTTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: LDKLPKGLFVVFQRGISWYSLSF*DSWVDI Trigger: GATATCAACCCATGAATCCCAGAAGCTGAGAGAATA...CCAACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAATATACCAGAGGAAACCTGCAAAAACTACCTGTTGTCTGGAGATCTTGCCCCGTACATTTCTTaGACTCTGATAATTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWNIPEETCKNYLLSGDLAPYIS*TLIISF Trigger: GAAAGAAATTATCAGAGTCCAAGAAATGTACGGGGC...AAGATCTCCAGACAACAGGTAGTTTTTGCAGGTTTCCTCTGGTATATTCCAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | GTCAAAGCAGAAAGGGCCCAACTTTCTTTTGAGGATGTTGGCTTCTTTGATGTTGAGGTGTGTTGTATTTaGACTTTCCTTCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKAERAQLSFEDVGFFDVEVCCI*TFLLLH Trigger: ATGAAGAAGAAGGAAAGTTCAAATACAACACACCTC...AACATCAAAGAAGCCAACATCCTCAAAAGAAAGTTGGGCCCTTTCTGCTTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR GCA 90 bp | ATCTTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTTCTTCATCTTCTGCTaGATCTTCAGCTTTATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILDKLPKGLFVVFQRGISFFIFC*IFSFIL Trigger: CAGGATAAAGCTGAAGATGCAGCAGAAGATGAAGAA...ACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTGAGGTGTGTTGTATTTaGACTTTCCTTCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILDKLPKGLFVVFQRGISEVCCI*TFLLLH Trigger: ATGAAGAAGAAGGAAAGTTCAAATACAACACACCTC...ACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGTTACAGGCAGTTGTGAGCCACCTGACTAGGATGCTGGTCCTCTGCAGGCCTGAACTGCCTGTATaGTTTCTCTCGCTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LELQAVVSHLTRMLVLCRPELPV*FLSLAG Trigger: CCCAGCCAGCGAGAGAAACAATACAGGCAGTTCAGG...CCTGCAGAGGACCAGCATCCTAGTCAGGTGGCTCACAACTGCCTGTAACTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS TCA 90 bp | CGCTGTCTGGGTGGTACTGCCTGGCGAGCTTGTGAAAAGACTCCCTaGCGTCGTCTACAGAGCATCCTTCATCCAGATTCAGCAGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RCLGGTAWRACEKTP*RRLQSILHPDSAAC Trigger: ACAGGCTGCTGAATCTGGATGAAGGATGCTCTGTAGACGACGTCAGGGAGTCTTTTCACAAGCTCGCCAGGCAGTACCACCCAGACAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049244.10 ENSMUST00000133731.2 ENSMUST00000143058.2 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGTTACAGGCAGTTGTGAGCCACCTGACTAGGATGCTGGTCCTCTGCAGGAAACTGCTCACACACTaGGGCCCACTGTTTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LELQAVVSHLTRMLVLCRKLLTH*GPLFLL Trigger: GAGCAGAAACAGTGGGCCCAAGTGTGTGAGCAGTTT...CCTGCAGAGGACCAGCATCCTAGTCAGGTGGCTCACAACTGCCTGTAACTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS TCA 90 bp | GCATCACTAGAACCGCTGTCTGGGTGGTACTGCCTGGCGAGCTTGTaGAAAGACTCCCTGACGTCGTCTACAGAGCATCCTTCATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASLEPLSGWYCLASL*KDSLTSSTEHPSSR Trigger: TCTGGATGAAGGATGCTCTGTAGACGACGTCAGGGAGTCTTTTCACAAGCTCGCCAGGCAGTACCACCCAGACAGCGGTTCTAGTGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049244.10 ENSMUST00000133731.2 ENSMUST00000143058.2 ENSMUST00000169982.2 |
||
| CDS TCA 90 bp | TGCCGTACGTCCTTGACAGTTATGCTGTTGGCGAAGAACTCCCTCTaGAGCTTCTGCCTTTGGTATTCCATCACCTGCTCCGTCGCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: CRTSLTVMLLAKNSL*SFCLWYSITCSVAR Trigger: TCGCGCGACGGAGCAGGTGATGGAATACCAAAGGCAGAAGCTTCAGAGGGAGTTCTTCGCCAACAGCATAACTGTCAAGGACGTACGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | TACCTGAAGTCTGGCGCCGGAGCCTGCTCCTTCAGGGGCAGGGTCTGCCTCTTATTTAGAAAGCCTGCCTaGACTCTGGGTGTTTTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YLKSGAGACSFRGRVCLLFRKPA*TLGVFD Trigger: ATCAAAAACACCCAGAGTCAAGGCAGGCTTTCTAAA...TAAGAGGCAGACCCTGCCCCTGAAGGAGCAGGCTCCGGCGCCAGACTTCAGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS GCA 90 bp | CTTCAGCGGTTTTCCTTTCCCGCTGAGATTGTCAAAGTCTCCTTTTaGCATGGATTCCTGAATGAGGTCCTCCACCAGGCGCTCGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQRFSFPAEIVKVSF*HGFLNEVLHQALDG Trigger: GCCATCGAGCGCCTGGTGGAGGACCTCATTCAGGAATCCATGGCAAAAGGAGACTTTGACAATCTCAGCGGGAAAGGAAAACCGCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTACCTACTTGCCCTTTTCTTTGTCCAGTGCCCACAGGGAAGGCCTTTGTACTGAAGCTTCTGCCTTaGGTATTCCATCACCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLPTCPFLCPVPTGKAFVLKLLP*VFHHLL Trigger: GAGCAGGTGATGGAATACCAAAGGCAGAAGCTTCAG...TACAAAGGCCTTCCCTGTGGGCACTGGACAAAGAAAAGGGCAAGTAGGTAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | TCTTACAGTGATCGGGAGCCAGAGCTCTTAGCACAAAGCCATACTCCACGCTGCCTGGCTAACGTCAGTTaGGTTTTCTTCTGTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SYSDREPELLAQSHTPRCLANVS*VFFCDF Trigger: GAAGTCACAGAAGAAAACCAAACTGACGTTAGCCAG...GCAGCGTGGAGTATGGCTTTGTGCTAAGAGCTCTGGCTCCCGATCACTGTAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGCAAAGAGCAAAGACTCTCACCCTCTGGGCAGTTTCTCCAGCCCCTTTCTCTGGCTAACGTCAGTTaGGTTTTCTTCTGTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSKEQRLSPSGQFLQPLSLANVS*VFFCDF Trigger: GAAGTCACAGAAGAAAACCAAACTGACGTTAGCCAG...AGAAAGGGGCTGGAGAAACTGCCCAGAGGGTGAGAGTCTTTGCTCTTTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS CCA 90 bp | AATCTTTATAAATGTTGCAGAGTCAGCATCACTAGAACCGCTGTCTaGGTGGTACTGCCTGGCGAGCTTGTGAAAAGACTCCCTGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: NLYKCCRVSITRTAV*VVLPGELVKRLPDV Trigger: GACGTCAGGGAGTCTTTTCACAAGCTCGCCAGGCAGTACCACCCAGACAGCGGTTCTAGTGATGCTGACTCTGCAACATTTATAAAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049244.10 ENSMUST00000143058.2 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | TATAAGTTGCTAGTGTCTCAGAGAGCTCTGAGGTTTCTGGAAGGCCCTATGTGGCTGAAGCTTCTGCCTTaGGTATTCCATCACCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YKLLVSQRALRFLEGPMWLKLLP*VFHHLL Trigger: GAGCAGGTGATGGAATACCAAAGGCAGAAGCTTCAG...CCACATAGGGCCTTCCAGAAACCTCAGAGCTCTCTGAGACACTAGCAACTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | TATAAGTTGCTAGTGTCTCAGAGAGCTCTGAGGTTTCTGGAAGGCCCTATGTGGCCTTTCCCGCTGAGATaGTCAAAGTCTCCTTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: YKLLVSQRALRFLEGPMWPFPLR*SKSPFA Trigger: GGCAAAAGGAGACTTTGACAATCTCAGCGGGAAAGG...CCACATAGGGCCTTCCAGAAACCTCAGAGCTCTCTGAGACACTAGCAACTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | GTCCTTATGGTTAGAAAAGTCAAACAGCGACTACCTACCTATAAGTTGCTAGTGCCTGAACTGCCTGTATaGTTTCTCTCGCTGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLMVRKVKQRLPTYKLLVPELPV*FLSLAG Trigger: CCCAGCCAGCGAGAGAAACAATACAGGCAGTTCAGG...CACTAGCAACTTATAGGTAGGTAGTCGCTGTTTGACTTTTCTAACCATAAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | TTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTGGAAACTGCTCACACACTaGGGCCCACTGTTTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LDKLPKGLFVVFQRGISWKLLTH*GPLFLL Trigger: GAGCAGAAACAGTGGGCCCAAGTGTGTGAGCAGTTT...CCAACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS GCA 90 bp | TTCTCCCTGGCTAACGTCAGTTTGGTTTTCTTCTGTGACTTCGTTTaGTTCTACGAAGGCCCCGTACATTTCTTGGACTCTGATAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSLANVSLVFFCDFV*FYEGPVHFLDSDNF Trigger: GAAATTATCAGAGTCCAAGAAATGTACGGGGCCTTCGTAGAAGCAAACGAAGTCACAGAAGAAAACCAAACTGACGTTAGCCAGGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS-3UTR CAA 90 bp | CAGAACTCACCCAAGTTTCTCATCTACCACCGGGGTGTGATTAGTTCTGTGAAACAGGATCCACTCTGGTaGGTATCCATTATCTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: QNSPKFLIYHRGVISSVKQDPLW*VSIIYQ Trigger: TTGATAGATAATGGATACCAACCAGAGTGGATCCTG...TTTCACAGAACTAATCACACCCCGGTGGTAGATGAGAAACTTGGGTGAGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS GCA 90 bp | GAAAGCATTTTTATACCAGGAGGAATCAAGGAAGCGTTTGTTAGGTaGAGTCTCAAGATCCGAGTGGTCTTCATGCACACTGTGTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: ESIFIPGGIKEAFVR*SLKIRVVFMHTVFI Trigger: GATAAACACAGTGTGCATGAAGACCACTCGGATCTTGAGACTGCACCTAACAAACGCTTCCTTGATTCCTCCTGGTATAAAAATGCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049244.10 ENSMUST00000133731.2 ENSMUST00000143058.2 ENSMUST00000169982.2 |
||
| CDS CCA 90 bp | TTGCTCGATGGTGTCCTTAATCTCCTTCTGCATCAGGATCCACTCTaGTTGGTATCCATTATCTATCAATATTCGGTTCAGGTTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLDGVLNLLLHQDPL*LVSIIYQYSVQVVS Trigger: ACTCACAACCTGAACCGAATATTGATAGATAATGGATACCAACCAGAGTGGATCCTGATGCAGAAGGAGATTAAGGACACCATCGAGCAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS CCA 90 bp | TTTAGAAAGCCTGCCTTGACTCTGGGTGTTTTTGATTCTTCTCCCTaGCTAACGTCAGTTTGGTTTTCTTCTGTGACTTCGTTTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FRKPALTLGVFDSSP*LTSVWFSSVTSFAS Trigger: AGAAGCAAACGAAGTCACAGAAGAAAACCAAACTGACGTTAGCCAGGGAGAAGAATCAAAAACACCCAGAGTCAAGGCAGGCTTTCTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS TCA 90 bp | ATCTATCAATATTCGGTTCAGGTTGTGAGTCATGGGATCAATATATaGGCAGCCAGAAAATTTCTTCAGCGGTTTTCCTTTCCCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: IYQYSVQVVSHGINI*AARKFLQRFSFPAE Trigger: CTCAGCGGGAAAGGAAAACCGCTGAAGAAATTTTCTGGCTGCTCATATATTGATCCCATGACTCACAACCTGAACCGAATATTGATAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS TCA 90 bp | AAGTTGAAATCATTAATTCGCTTGTTCAGCTTTCGTATCTTTTCTTaGAACTGCTCACACACTTGGGCCCACTGTTTCTGCTCTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLKSLIRLFSFRIFS*NCSHTWAHCFCSVG Trigger: ACCCACAGAGCAGAAACAGTGGGCCCAAGTGTGTGAGCAGTTTCAAGAAAAGATACGAAAGCTGAACAAGCGAATTAATGATTTCAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
||
| CDS CCA 90 bp | TGTAATATTCTCTCAGCTTCTGGGATTCATGGGTTGATATCATCCTaGATCTGGGGTCTGAAAGCATTTTTATACCAGGAGGAATCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CNILSASGIHGLISS*IWGLKAFLYQEESR Trigger: CCTTGATTCCTCCTGGTATAAAAATGCTTTCAGACCCCAGATCCAGGATGATATCAACCCATGAATCCCAGAAGCTGAGAGAATATTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049244.10 ENSMUST00000133731.2 ENSMUST00000143058.2 ENSMUST00000169982.2 |
||
| CDS CCA 90 bp | GAGGAATCAAGGAAGCGTTTGTTAGGTGCAGTCTCAAGATCCGAGTaGTCTTCATGCACACTGTGTTTATCATTGTATCTGGAATTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: EESRKRLLGAVSRSE*SSCTLCLSLYLEFL Trigger: TAAGAATTCCAGATACAATGATAAACACAGTGTGCATGAAGACCACTCGGATCTTGAGACTGCACCTAACAAACGCTTCCTTGATTCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS-3UTR CAA 90 bp | ACTGAAGATTCTTCCACTCCATGTTCACTCCAGACTCTCAGTTTTAAAGCAAGCCAGGATCCACTCTGGTaGGTATCCATTATCTATCAA | + |
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Preference number: 5 (lower is better) Translates to: TEDSSTPCSLQTLSFKASQDPLW*VSIIYQ Trigger: TTGATAGATAATGGATACCAACCAGAGTGGATCCTG...GCTTGCTTTAAAACTGAGAGTCTGGAGTGAACATGGAGTGGAAGAATCTTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS-3UTR CAA 90 bp | TTAGACAAACTGCCAAAGGGTCTCTTTGTTGTGTTCCAAAGAGGGATAAGTTGGTTTAGAAAGCCTGCCTaGACTCTGGGTGTTTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: LDKLPKGLFVVFQRGISWFRKPA*TLGVFD Trigger: ATCAAAAACACCCAGAGTCAAGGCAGGCTTTCTAAA...CCAACTTATCCCTCTTTGGAACACAACAAAGAGACCCTTTGGCAGTTTGTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS CCA 90 bp | GTTGGTATCCATTATCTATCAATATTCGGTTCAGGTTGTGAGTCATaGGATCAATATATGAGCAGCCAGAAAATTTCTTCAGCGGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: VGIHYLSIFGSGCES*DQYMSSQKISSAVF Trigger: GAAAACCGCTGAAGAAATTTTCTGGCTGCTCATATATTGATCCCATGACTCACAACCTGAACCGAATATTGATAGATAATGGATACCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS-3UTR CAA 90 bp | GTCCTTATGGTTAGAAAAGTCAAACAGCGACTACCTACCTATAAGTTGCTAGTGAGGATTACTGATCCTTaGAATGTAAGGTGCGTTTTA | + |
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Preference number: 5 (lower is better) Translates to: VLMVRKVKQRLPTYKLLVRITDP*NVRCVL Trigger: TAAAACGCACCTTACATTCAAAGGATCAGTAATCCT...CACTAGCAACTTATAGGTAGGTAGTCGCTGTTTGACTTTTCTAACCATAAGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169982.2 |
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| CDS TCA 72 bp | GGTATTCCATCACCTGCTCCGTCGCGCGATCCGCCCTaGACTGCCTGTATTGTTTCTCTCGCTGGCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GIPSPAPSRDPP*TACIVSLAGWG Trigger: CCCCCAGCCAGCGAGAGAAACAATACAGGCAGTTCAGGGCGGATCGCGCGACGGAGCAGGTGATGGAATACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049244.10 ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS CAA 72 bp | GCTGTTGGCGAAGAACTCCCTCTGAAGCTTCTGCCTTaGGTATTCCATCACCTGCTCCGTCGCGCGATCCGC | + |
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Preference number: 6 (lower is better) Translates to: AVGEELPLKLLP*VFHHLLRRAIR Trigger: GCGGATCGCGCGACGGAGCAGGTGATGGAATACCAAAGGCAGAAGCTTCAGAGGGAGTTCTTCGCCAACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS CAA 90 bp | GACAGTTATGCTGTTGGCGAAGAACTCCCTCTGAAGCTTCTGCCTTaGGTATTCCATCACCTGCTCCGTCGCGCGATCCGCCCTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: DSYAVGEELPLKLLP*VFHHLLRRAIRPEL Trigger: CAGTTCAGGGCGGATCGCGCGACGGAGCAGGTGATGGAATACCAAAGGCAGAAGCTTCAGAGGGAGTTCTTCGCCAACAGCATAACTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS CAA 72 bp | TTCCTGAATGAGGTCCTCCACCAGGCGCTCGATGGCTaGAGTTATCTTCTGTTGCTTGCTCTGCCGTACGTC | + |
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Preference number: 6 (lower is better) Translates to: FLNEVLHQALDG*SYLLLLALPYV Trigger: GACGTACGGCAGAGCAAGCAACAGAAGATAACTCAAGCCATCGAGCGCCTGGTGGAGGACCTCATTCAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS CAA 90 bp | TGCCATGGATTCCTGAATGAGGTCCTCCACCAGGCGCTCGATGGCTaGAGTTATCTTCTGTTGCTTGCTCTGCCGTACGTCCTTGACAGT | + |
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Preference number: 6 (lower is better) Translates to: CHGFLNEVLHQALDG*SYLLLLALPYVLDS Trigger: ACTGTCAAGGACGTACGGCAGAGCAAGCAACAGAAGATAACTCAAGCCATCGAGCGCCTGGTGGAGGACCTCATTCAGGAATCCATGGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS TCA 72 bp | GGTGGTACTGCCTGGCGAGCTTGTGAAAAGACTCCCTaGCGTCGTCTACAGAGCATCCTTCATCCAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: GGTAWRACEKTP*RRLQSILHPDS Trigger: TGAATCTGGATGAAGGATGCTCTGTAGACGACGTCAGGGAGTCTTTTCACAAGCTCGCCAGGCAGTACCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049244.10 ENSMUST00000133731.2 ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS CAA 90 bp | AATGAGGTCCTCCACCAGGCGCTCGATGGCTTGAGTTATCTTCTGTaGCTTGCTCTGCCGTACGTCCTTGACAGTTATGCTGTTGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: NEVLHQALDGLSYLL*LALPYVLDSYAVGE Trigger: TTCGCCAACAGCATAACTGTCAAGGACGTACGGCAGAGCAAGCAACAGAAGATAACTCAAGCCATCGAGCGCCTGGTGGAGGACCTCATT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS CCA 72 bp | AAATGTTGCAGAGTCAGCATCACTAGAACCGCTGTCTaGGTGGTACTGCCTGGCGAGCTTGTGAAAAGACTC | + |
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Preference number: 6 (lower is better) Translates to: KCCRVSITRTAV*VVLPGELVKRL Trigger: GAGTCTTTTCACAAGCTCGCCAGGCAGTACCACCCAGACAGCGGTTCTAGTGATGCTGACTCTGCAACATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049244.10 ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS TCA 72 bp | TCCTTGACAGTTATGCTGTTGGCGAAGAACTCCCTCTaGAGCTTCTGCCTTTGGTATTCCATCACCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLTVMLLAKNSL*SFCLWYSITCS Trigger: GGAGCAGGTGATGGAATACCAAAGGCAGAAGCTTCAGAGGGAGTTCTTCGCCAACAGCATAACTGTCAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS GCA 72 bp | TCTTCTGCTGCATCTTCAGCTTTATCCTGTCCGGCATaGATCCGTTTTATCGCATGGGACAGCACATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSAASSALSCPA*IRFIAWDSTFL Trigger: CAGGAATGTGCTGTCCCATGCGATAAAACGGATGCATGCCGGACAGGATAAAGCTGAAGATGCAGCAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049244.10 ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS GCA 72 bp | TTTTCCTTTCCCGCTGAGATTGTCAAAGTCTCCTTTTaGCATGGATTCCTGAATGAGGTCCTCCACCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: FSFPAEIVKVSF*HGFLNEVLHQA Trigger: CGCCTGGTGGAGGACCTCATTCAGGAATCCATGGCAAAAGGAGACTTTGACAATCTCAGCGGGAAAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS GCA 72 bp | AGCTTCTTCCTAGACATTAAAAGCGCTTCTCGGAGTTaGTCGATGGTGTCCTTAATCTCCTTCTGCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: SFFLDIKSASRS*SMVSLISFCIR Trigger: CCTGATGCAGAAGGAGATTAAGGACACCATCGAGCAACTCCGAGAAGCGCTTTTAATGTCTAGGAAGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS GCA 72 bp | TTTATACCAGGAGGAATCAAGGAAGCGTTTGTTAGGTaGAGTCTCAAGATCCGAGTGGTCTTCATGCACACT | + |
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Preference number: 6 (lower is better) Translates to: FIPGGIKEAFVR*SLKIRVVFMHT Trigger: AGTGTGCATGAAGACCACTCGGATCTTGAGACTGCACCTAACAAACGCTTCCTTGATTCCTCCTGGTATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049244.10 ENSMUST00000133731.2 ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS CCA 72 bp | GCTTCTGGGATTCATGGGTTGATATCATCCTGGATCTaGGGTCTGAAAGCATTTTTATACCAGGAGGAATCA | + |
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Preference number: 6 (lower is better) Translates to: ASGIHGLISSWI*GLKAFLYQEES Trigger: TGATTCCTCCTGGTATAAAAATGCTTTCAGACCCCAGATCCAGGATGATATCAACCCATGAATCCCAGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049244.10 ENSMUST00000133731.2 ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS CCA 72 bp | AGGAAGCGTTTGTTAGGTGCAGTCTCAAGATCCGAGTaGTCTTCATGCACACTGTGTTTATCATTGTATCTG | + |
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Preference number: 6 (lower is better) Translates to: RKRLLGAVSRSE*SSCTLCLSLYL Trigger: CAGATACAATGATAAACACAGTGTGCATGAAGACCACTCGGATCTTGAGACTGCACCTAACAAACGCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS CAA 72 bp | GCCTGTAATATTCTCTCAGCTTCTGGGATTCATGGGTaGATATCATCCTGGATCTGGGGTCTGAAAGCATTT | + |
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Preference number: 6 (lower is better) Translates to: ACNILSASGIHG*ISSWIWGLKAF Trigger: AAATGCTTTCAGACCCCAGATCCAGGATGATATCAACCCATGAATCCCAGAAGCTGAGAGAATATTACAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049244.10 ENSMUST00000133731.2 ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS CAA 90 bp | GATTCAGCAGCCTGTAATATTCTCTCAGCTTCTGGGATTCATGGGTaGATATCATCCTGGATCTGGGGTCTGAAAGCATTTTTATACCAG | + |
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Preference number: 6 (lower is better) Translates to: DSAACNILSASGIHG*ISSWIWGLKAFLYQ Trigger: CTGGTATAAAAATGCTTTCAGACCCCAGATCCAGGATGATATCAACCCATGAATCCCAGAAGCTGAGAGAATATTACAGGCTGCTGAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049244.10 ENSMUST00000133731.2 ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS CAA 90 bp | CTCGATGGTGTCCTTAATCTCCTTCTGCATCAGGATCCACTCTGGTaGGTATCCATTATCTATCAATATTCGGTTCAGGTTGTGAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LDGVLNLLLHQDPLW*VSIIYQYSVQVVSH Trigger: ATGACTCACAACCTGAACCGAATATTGATAGATAATGGATACCAACCAGAGTGGATCCTGATGCAGAAGGAGATTAAGGACACCATCGAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS CAA 72 bp | AAAGCATTTTTATACCAGGAGGAATCAAGGAAGCGTTaGTTAGGTGCAGTCTCAAGATCCGAGTGGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: KAFLYQEESRKR*LGAVSRSEWSS Trigger: TGAAGACCACTCGGATCTTGAGACTGCACCTAACAAACGCTTCCTTGATTCCTCCTGGTATAAAAATGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049244.10 ENSMUST00000133731.2 ENSMUST00000143058.2 ENSMUST00000169982.2 |
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| CDS CCA 72 bp | TCCTTAATCTCCTTCTGCATCAGGATCCACTCTGGTTaGTATCCATTATCTATCAATATTCGGTTCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SLISFCIRIHSG*YPLSINIRFRL Trigger: CAACCTGAACCGAATATTGATAGATAATGGATACCAACCAGAGTGGATCCTGATGCAGAAGGAGATTAAGGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS CAA 72 bp | TGGACTTTCTGCCTGGTCAGGATGGGAACAATTAAGTaGAAATCATTAATTCGCTTGTTCAGCTTTCGTATC | + |
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Preference number: 6 (lower is better) Translates to: WTFCLVRMGTIK*KSLIRLFSFRI Trigger: GATACGAAAGCTGAACAAGCGAATTAATGATTTCAACTTAATTGTTCCCATCCTGACCAGGCAGAAAGTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS GCA 72 bp | CTGATAATTTCTTTCTGTGCGTCAAAATGGACTTTCTaGCTGGTCAGGATGGGAACAATTAAGTTGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: LIISFCASKWTF*LVRMGTIKLKS Trigger: TGATTTCAACTTAATTGTTCCCATCCTGACCAGGCAGAAAGTCCATTTTGACGCACAGAAAGAAATTATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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| CDS TCA 72 bp | TGGTATCCATTATCTATCAATATTCGGTTCAGGTTGTaGGTCATGGGATCAATATATGAGCAGCCAGAAAAT | + |
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Preference number: 6 (lower is better) Translates to: WYPLSINIRFRL*VMGSIYEQPEN Trigger: ATTTTCTGGCTGCTCATATATTGATCCCATGACTCACAACCTGAACCGAATATTGATAGATAATGGATACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049244.10 ENSMUST00000169982.2 |
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