Pregenerated sensors for DNAJC27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020657Ensembl transcript IDs: ENSMUST00000020986.15, ENSMUST00000049584.6, ENSMUST00000219923.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCTGGGATCCGGGATGAGCTTCAGGTTCTCCAGCTCCTGTGGCTaGCACTGCCTCTCTCTTAGCACTGGCTTGTCTCCCCCTGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: GLGSGMSFRFSSSCG*HCLSLSTGLSPPGG Trigger: GCCACCAGGGGGAGACAAGCCAGTGCTAAGAGAGAGGCAGTGCCAGCCACAGGAGCTGGAGAACCTGAAGCTCATCCCGGATCCCAGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR GCA 90 bp | GGATCCGGGATGAGCTTCAGGTTCTCCAGCTCCTGTGGCTGGCACTaGCTCTCTCTTAGCACTGGCTTGTCTCCCCCTGGTGGCTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: GSGMSFRFSSSCGWH*LSLSTGLSPPGGWR Trigger: TCTCCAGCCACCAGGGGGAGACAAGCCAGTGCTAAGAGAGAGGCAGTGCCAGCCACAGGAGCTGGAGAACCTGAAGCTCATCCCGGATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR GCA 90 bp | GGATCCGGGATGAGCTTCAGGTTCTCCAGCTCCTGTGGCTGGCACTaGCTCTCTCTTAGCACTGGCTTGTCTCCCCCTGGTGGCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: GSGMSFRFSSSCGWH*LSLSTGLSPPGGRK Trigger: CTTCCTGCCACCAGGGGGAGACAAGCCAGTGCTAAGAGAGAGGCAGTGCCAGCCACAGGAGCTGGAGAACCTGAAGCTCATCCCGGATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR GCA 90 bp | TCAGCAAGTGACCTGAGGGACCCAAATGGGAACACTAAAGCCCCCTaGTGTAACTGCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SASDLRDPNGNTKAP*CNCSPAHVVERGAA Trigger: GGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATTTGGGTCCCTCAGGTCACTTGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR CCA 90 bp | TCCCTCCTAGTGCCCAACATGCCTGAGCTCAGGAAAGGCCCAAGCTaGCCTTTCCGTCTGAATGGTGTGACTGAGCGCACACTCCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: SLLVPNMPELRKGPS*PFRLNGVTERTLPS Trigger: ACTTGGGAGTGTGCGCTCAGTCACACCATTCAGACGGAAAGGCCAGCTTGGGCCTTTCCTGAGCTCAGGCATGTTGGGCACTAGGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR GCA 90 bp | GTTCTGGTGTCGGGCCCCTCATTCCCAGGGACACAGCATCCTTGCTaGTTGATGCTAGCAACTATTTCTAGGGCAGAGCAAAGGCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VLVSGPSFPGTQHPC*LMLATISRAEQRPG Trigger: CCCAGGCCTTTGCTCTGCCCTAGAAATAGTTGCTAGCATCAAGCAGCAAGGATGCTGTGTCCCTGGGAATGAGGGGCCCGACACCAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR GCA 90 bp | TCTGTTCTGGTGTCGGGCCCCTCATTCCCAGGGACACAGCATCCTTaGTGCTTGATGCTAGCAACTATTTCTAGGGCAGAGCAAAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SVLVSGPSFPGTQHP*CLMLATISRAEQRP Trigger: AGGCCTTTGCTCTGCCCTAGAAATAGTTGCTAGCATCAAGCAGCAAGGATGCTGTGTCCCTGGGAATGAGGGGCCCGACACCAGAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR CCA 90 bp | AGGGCAAGAGGAAAGGCCATGGCAGATGTGGGATGTAACAAAGAGTaGGGCGAGAGGAGAGCAGAAGAAAGAGACGGGTCTGTGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: RARGKAMADVGCNKE*GERRAEERDGSVEE Trigger: CTCTTCCACAGACCCGTCTCTTTCTTCTGCTCTCCTCTCGCCCCACTCTTTGTTACATCCCACATCTGCCATGGCCTTTCCTCTTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR CCA 90 bp | TGGCACTGCCTCTCTCTTAGCACTGGCTTGTCTCCCCCTGGTGGCTaGAGAAAGAACAGAGTCAGTGTCCTAAAAGGGCAGATAACAGTG | + |
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Preference number: 1 (lower is better) Translates to: WHCLSLSTGLSPPGG*RKNRVSVLKGQITV Trigger: CACTGTTATCTGCCCTTTTAGGACACTGACTCTGTTCTTTCTCCAGCCACCAGGGGGAGACAAGCCAGTGCTAAGAGAGAGGCAGTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR CCA 90 bp | CTACTTATTTCAAGTCAGCTGAGCCCAGGGCAAGAGGAAAGGCCATaGCAGATGTGGGATGTAACAAAGAGTGGGGCGAGAGGAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LLISSQLSPGQEERP*QMWDVTKSGARGEQ Trigger: CTGCTCTCCTCTCGCCCCACTCTTTGTTACATCCCACATCTGCCATGGCCTTTCCTCTTGCCCTGGGCTCAGCTGACTTGAAATAAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR CCA 90 bp | CTTAGCTCCATGGGAGGCAGCATGAGAGAACCTACTGAGCTGACCTaGAAGGGATCACTGTCATTGCTAGAGGCGATATGCTGGCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LSSMGGSMREPTELT*KGSLSLLEAICWLL Trigger: AAGGAGCCAGCATATCGCCTCTAGCAATGACAGTGATCCCTTCCAGGTCAGCTCAGTAGGTTCTCTCATGCTGCCTCCCATGGAGCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR GCA 90 bp | ATTCACAGTGGAGGGAAAGAATGTGCAGGGAGCGGTCAGCACCAGTaGAGGGAGCTAACCCAAACTGTCCAACTCTTCAGTAACAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: IHSGGKECAGSGQHQ*RELTQTVQLFSNSL Trigger: AAGGCTGTTACTGAAGAGTTGGACAGTTTGGGTTAGCTCCCTGCACTGGTGCTGACCGCTCCCTGCACATTCTTTCCCTCCACTGTGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR CCA 90 bp | ACACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTaGATAATCAGATGTGCTAGGCGTGAGGGAGCCTCAAGCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: TPLILMTPTFCSRSS*IIRCARREGASSRT Trigger: AGTTCTGCTTGAGGCTCCCTCACGCCTAGCACATCTGATTATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR CCA 90 bp | ATGGATGGAGGGTTGCTGGGAGGAAGAGCAGGTGGGTCACAGTCATaGACTTTCACAGGTGAATGCATAAGCGATGACACAATGACAAAC | + |
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Preference number: 1 (lower is better) Translates to: MDGGLLGGRAGGSQS*TFTGECISDDTMTN Trigger: GTTTGTCATTGTGTCATCGCTTATGCATTCACCTGTGAAAGTCCATGACTGTGACCCACCTGCTCTTCCTCCCAGCAACCCTCCATCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR GCA 90 bp | TGCCAAGTAATTCAATCCAGACTGGCCTCTCTCTTGCAATACTCCTaGCTCATCCTCCACCATCTCTGGCTACTAACTGTACAGGCTGAT | + |
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Preference number: 1 (lower is better) Translates to: CQVIQSRLASLLQYS*LILHHLWLLTVQAD Trigger: ATCAGCCTGTACAGTTAGTAGCCAGAGATGGTGGAGGATGAGGCAGGAGTATTGCAAGAGAGAGGCCAGTCTGGATTGAATTACTTGGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR GCA 90 bp | CTGGAAGGGATCACTGTCATTGCTAGAGGCGATATGCTGGCTCCTTaGTTCCTAGCTTCAAATGGCAATCCCTCTGTCTTTCTACCACTT | + |
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Preference number: 1 (lower is better) Translates to: LEGITVIARGDMLAP*FLASNGNPSVFLPL Trigger: AAGTGGTAGAAAGACAGAGGGATTGCCATTTGAAGCTAGGAAGCAAGGAGCCAGCATATCGCCTCTAGCAATGACAGTGATCCCTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR GCA 90 bp | ATGTTTCCTGAGGTAAATACAAGCCTTAAAGAATGGTGTACAGTGTaGAGAAGGACAGCAGCCTTACTCTCAGCATCTGGACTCGTGAGT | + |
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Preference number: 1 (lower is better) Translates to: MFPEVNTSLKEWCTV*RRTAALLSASGLVS Trigger: ACTCACGAGTCCAGATGCTGAGAGTAAGGCTGCTGTCCTTCTGCACACTGTACACCATTCTTTAAGGCTTGTATTTACCTCAGGAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR TCA 90 bp | CATACTATTAACTTACACATGAGGGAACACAACAGTGAGCATTCGTaGAGGAAAACTCCATGTTGGTTATTTCACCTCAAGGGGAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: HTINLHMREHNSEHS*RKTPCWLFHLKGSL Trigger: CAGACTCCCCTTGAGGTGAAATAACCAACATGGAGTTTTCCTTCACGAATGCTCACTGTTGTGTTCCCTCATGTGTAAGTTAATAGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR-3UTR TCA 90 bp | ACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTGACAGCACCACACACACCTCTCAGGAGTCGAGCAACATaGGCCCAGCTCCATCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: TRRSLGPALRLTAPHTPLRSRAT*AQLHQL Trigger: GAGCTGATGGAGCTGGGCTCATGTTGCTCGACTCCT...GAGAGGTGTGTGTGGTGCTGTCAGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTCTGATGGTGGGCAGATaGATGGATGGAGGGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ALLPMWLNEAQPGPRTQALMVGR*MDGGLL Trigger: CAGCAACCCTCCATCCATCCATCTGCCCACCATCAG...AGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR CAA 90 bp | TTCTCCAGCTCCTGTGGCTGGCACTGCCTCTCTCTTAGCACTGGCTaGTCTCCCCCTGGTGGCAGGAAGCCGCTTAGTGGGGTGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FSSSCGWHCLSLSTG*SPPGGRKPLSGVQA Trigger: AGCCTGCACCCCACTAAGCGGCTTCCTGCCACCAGGGGGAGACAAGCCAGTGCTAAGAGAGAGGCAGTGCCAGCCACAGGAGCTGGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGACCCAAATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATAGCCGCTTAGTGGGGTaGAGGCTCCCGGGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: RDPNGNTKAPCCNCSPAHSRLVG*RLPGAR Trigger: CCTGGCCCCCGGGAGCCTGCACCCCACTAAGCGGCT...ATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATTTGGGTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTCTTGTCTCCCCCTGGTaGCTGGAGAAAGAACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: ALLPMWLNEAQPGPRTQALVSPW*LEKEQS Trigger: ACTCTGTTCTTTCTCCAGCCACCAGGGGGAGACAAG...AGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR-3UTR TCA 90 bp | ACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTGACAGCACCACACACACCTCTCTGTTATTCCTTTCTCTaGTGGTGGGCAGATGGATGG | + |
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Preference number: 2 (lower is better) Translates to: TRRSLGPALRLTAPHTPLCYSFL*WWADGW Trigger: CCATCCATCTGCCCACCATCAGAGAAAGGAATAACA...GAGAGGTGTGTGTGGTGCTGTCAGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCAGGAGTCGAGCAACATaGGCCCAGCTCCATCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: KAPCCNCSPAHVVERGAARSRAT*AQLHQL Trigger: GAGCTGATGGAGCTGGGCTCATGTTGCTCGACTCCT...GGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR TCA 90 bp | TACGAGCATTCACAGTGGAGGGAAAGAATGTGCAGGGAGCGGTCAGCACCAGTGGCCCCGCACTCAGGCTaGCAGCACCACACACACCTC | + |
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Preference number: 2 (lower is better) Translates to: YEHSQWRERMCRERSAPVAPHSG*QHHTHL Trigger: GAGGTGTGTGTGGTGCTGTCAGCCTGAGTGCGGGGC...CACTGGTGCTGACCGCTCCCTGCACATTCTTTCCCTCCACTGTGAATGCTCGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR-3UTR GCA 90 bp | ATACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATGAGCCCAGCTCCATCGGAAGAGGGCCCGCCTaGCTCTCCCACCACCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: IPEFRGMTGVEQHEPSSIGRGPA*LSHHLW Trigger: CCACAGGTGGTGGGAGAGGCAGGCGGGCCCTCTTCC...GATGGAGCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTAACAGTGAGCATTCGTaGAGGAAAACTCCATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: ALLPMWLNEAQPGPRTQANSEHS*RKTPCW Trigger: CCAACATGGAGTTTTCCTTCACGAATGCTCACTGTT...AGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTCTATTAACTTACACATaGGGGAACACAACAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: ALLPMWLNEAQPGPRTQALLTYT*GNTTVS Trigger: GCTCACTGTTGTGTTCCCTCATGTGTAAGTTAATAG...AGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR-3UTR CCA 90 bp | CCTCTAAGAGCTTCTGTTCTGGTGTCGGGCCCCTCATTCCCAGGGACACAGCATTCCAGCTCCTGTGGCTaGCACTGCCTCTCTCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: PLRASVLVSGPSFPGTQHSSSCG*HCLSLS Trigger: GCTAAGAGAGAGGCAGTGCCAGCCACAGGAGCTGGA...ATGCTGTGTCCCTGGGAATGAGGGGCCCGACACCAGAACAGAAGCTCTTAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTCCAGTGTGCCCCAAATaGATCCTACTTATTTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: ALLPMWLNEAQPGPRTQAPVCPK*ILLISS Trigger: ACTTGAAATAAGTAGGATCCATTTGGGGCACACTGG...AGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR CAA 90 bp | TTCTCCAGCTCCTGTGGCTGGCACTGCCTCTCTCTTAGCACTGGCTaGTCTCCCCCTGGTGGCTGGAGAAAGAACAGAGTCAGTGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: FSSSCGWHCLSLSTG*SPPGGWRKNRVSVL Trigger: TAGGACACTGACTCTGTTCTTTCTCCAGCCACCAGGGGGAGACAAGCCAGTGCTAAGAGAGAGGCAGTGCCAGCCACAGGAGCTGGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR CAA 90 bp | CTGGTGTCGGGCCCCTCATTCCCAGGGACACAGCATCCTTGCTGCTaGATGCTAGCAACTATTTCTAGGGCAGAGCAAAGGCCTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: LVSGPSFPGTQHPCC*MLATISRAEQRPGI Trigger: GATCCCAGGCCTTTGCTCTGCCCTAGAAATAGTTGCTAGCATCAAGCAGCAAGGATGCTGTGTCCCTGGGAATGAGGGGCCCGACACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR TCA 90 bp | ACACACACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTGGATTCCCACCACCTGTGGTaGGGACTGAGGACAGGGACG | + |
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Preference number: 2 (lower is better) Translates to: THTSHPHDSHFLFQEQLDSHHLW*GLRTGT Trigger: CGTCCCTGTCCTCAGTCCTCACCACAGGTGGTGGGA...ATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR GCA 90 bp | TTCACTAAGAACAACATTTTAAAGCTCAGAGCAGCTGCGCAGAGCACAGCCATGAGCCGCTTAGTGGGGTaGAGGCTCCCGGGGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: FTKNNILKLRAAAQSTAMSRLVG*RLPGAR Trigger: CCTGGCCCCCGGGAGCCTGCACCCCACTAAGCGGCT...CATGGCTGTGCTCTGCGCAGCTGCTCTGAGCTTTAAAATGTTGTTCTTAGTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCAGGGTCCCTCCTAGTGCCCAACATGCCTGAGCTCAGGAAAGGCCCAAGCGGTGGGTCACAGTCATaGACTTTCACAGGTGAATGC | + |
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Preference number: 2 (lower is better) Translates to: HAGSLLVPNMPELRKGPSGGSQS*TFTGEC Trigger: GCATTCACCTGTGAAAGTCCATGACTGTGACCCACC...GCTTGGGCCTTTCCTGAGCTCAGGCATGTTGGGCACTAGGAGGGACCCTGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGGCCTTCTCCAGACTGCCCAGCACCGCACTGTGTGTTAAGACACAGACCCAGCGTCTCAAGATCTaGGAATCAGCAAGTGACCTG | + |
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Preference number: 2 (lower is better) Translates to: PRAFSRLPSTALCVKTQTQRLKI*ESASDL Trigger: CAGGTCACTTGCTGATTCTCAGATCTTGAGACGCTG...GGTCTGTGTCTTAACACACAGTGCGGTGCTGGGCAGTCTGGAGAAGGCCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR-3UTR TCA 90 bp | TACGAGCATTCACAGTGGAGGGAAAGAATGTGCAGGGAGCGGTCAGCACCAGTGAGGATAGAGAGACACTaGGAGCAGAGCCCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: YEHSQWRERMCRERSAPVRIERH*EQSPAA Trigger: AGCTGCTGGGCTCTGCTCTCAGTGTCTCTCTATCCT...CACTGGTGCTGACCGCTCCCTGCACATTCTTTCCCTCCACTGTGAATGCTCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGGCCTTCTCCAGACTGCCCAGCACCGCACTGTGTGTTAAGACACAGACCTGCTCAGCACCAGGATaGGAAGGAGCAATAGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: PRAFSRLPSTALCVKTQTCSAPG*EGAIAL Trigger: AAGAGCTATTGCTCCTTCTCATCCTGGTGCTGAGCA...GGTCTGTGTCTTAACACACAGTGCGGTGCTGGGCAGTCTGGAGAAGGCCCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
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| 3UTR-3UTR CCA 90 bp | ATACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATGAGCCCAGCTCCATCGGGCAGATGGATGGATaGAGGGTTGCTGGGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: IPEFRGMTGVEQHEPSSIGQMDG*RVAGRK Trigger: CTTCCTCCCAGCAACCCTCCATCCATCCATCTGCCC...GATGGAGCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR CCA 90 bp | ACACACACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTGGATCTCCATCCAGTCCTGTaGACCAGGCAGGGGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: THTSHPHDSHFLFQEQLDLHPVL*TRQGQQ Trigger: CTGTTGCCCCTGCCTGGTCCACAGGACTGGATGGAG...ATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCAACAGTGAGCATTCGTaGAGGAAAACTCCATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: KAPCCNCSPAHVVERGAANSEHS*RKTPCW Trigger: CCAACATGGAGTTTTCCTTCACGAATGCTCACTGTT...GGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR TCA 90 bp | CATGCAGGGTCCCTCCTAGTGCCCAACATGCCTGAGCTCAGGAAAGGCCCAAGCAACAGTGAGCATTCGTaGAGGAAAACTCCATGTTGG | + |
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Preference number: 2 (lower is better) Translates to: HAGSLLVPNMPELRKGPSNSEHS*RKTPCW Trigger: CCAACATGGAGTTTTCCTTCACGAATGCTCACTGTT...GCTTGGGCCTTTCCTGAGCTCAGGCATGTTGGGCACTAGGAGGGACCCTGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGCCATGGCAGATGTGGGATGTAACAAAGAGTGGGGCGAGAGGAGAGCAGGGGAGGAAGAGCAGGTaGGTCACAGTCATGGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: ERPWQMWDVTKSGARGEQGRKSR*VTVMDF Trigger: AAAGTCCATGACTGTGACCCACCTGCTCTTCCTCCC...CTGCTCTCCTCTCGCCCCACTCTTTGTTACATCCCACATCTGCCATGGCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAAGGGCCTTCTCCAGACTGCCCAGCACCGCACTGTGTGTTAAGACACAGACCCGTGAGTTAAGATGCTaGCAAAGCCACAGACGACAT | + |
|
Preference number: 2 (lower is better) Translates to: PRAFSRLPSTALCVKTQTRELRC*QSHRRH Trigger: ATGTCGTCTGTGGCTTTGCCAGCATCTTAACTCACG...GGTCTGTGTCTTAACACACAGTGCGGTGCTGGGCAGTCTGGAGAAGGCCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR GCA 90 bp | ATCCCTCTGTCTTTCTACCACTTGTCCCCGATTCAGTGCTGGCAGGAGCCCCTTCAAGACGTCCCAGTGTaGCCCAAATGGATCCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: IPLSFYHLSPIQCWQEPLQDVPV*PKWILL Trigger: AAGTAGGATCCATTTGGGGCACACTGGGACGTCTTG...AAGGGGCTCCTGCCAGCACTGAATCGGGGACAAGTGGTAGAAAGACAGAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTGGATAATCAGGGGCAGATGGATGGATaGAGGGTTGCTGGGAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TSHPHDSHFLFQEQLDNQGQMDG*RVAGRK Trigger: CTTCCTCCCAGCAACCCTCCATCCATCCATCTGCCC...CTGATTATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACTGTCCAACTCTTCAGTAACAGCCTTTCACCAAGGGCCTTCTCCAGACTGCTGGTGGGCAGATGGATaGATGGAGGGTTGCTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: KLSNSSVTAFHQGPSPDCWWADG*MEGCWE Trigger: CTCCCAGCAACCCTCCATCCATCCATCTGCCCACCA...GCAGTCTGGAGAAGGCCCTTGGTGAAAGGCTGTTACTGAAGAGTTGGACAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | ATAAGAATACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATGAGCCCAGCTGGTGGGCAGATGGATaGATGGAGGGTTGCTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: IRIPEFRGMTGVEQHEPSWWADG*MEGCWE Trigger: CTCCCAGCAACCCTCCATCCATCCATCTGCCCACCA...GCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGTATTCTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | ACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTGGATAATCAGTCCAGCTCCTGTGGCTaGCACTGCCTCTCTCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: TSHPHDSHFLFQEQLDNQSSSCG*HCLSLS Trigger: GCTAAGAGAGAGGCAGTGCCAGCCACAGGAGCTGGA...CTGATTATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | TACGAGCATTCACAGTGGAGGGAAAGAATGTGCAGGGAGCGGTCAGCACCAGTGCCTACTGAGCTGACCTaGAAGGGATCACTGTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: YEHSQWRERMCRERSAPVPTELT*KGSLSL Trigger: CAATGACAGTGATCCCTTCCAGGTCAGCTCAGTAGG...CACTGGTGCTGACCGCTCCCTGCACATTCTTTCCCTCCACTGTGAATGCTCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR TCA 90 bp | CGGGGGCCAGGCTCTTTCTCTCTCCTGTTGTTATTCCTTTCTCTGATGGTGGGCGAGGGAACACAACAGTaGGCATTCGTGAAGGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: RGPGSFSLLLLFLSLMVGEGTQQ*AFVKEN Trigger: GTTTTCCTTCACGAATGCTCACTGTTGTGTTCCCTC...GCCCACCATCAGAGAAAGGAATAACAACAGGAGAGAGAAAGAGCCTGGCCCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR TCA 90 bp | CACAGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGAAGTGCCCAACATGCCTaGGCTCAGGAAAGGCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: HRWLQLKIRIPEFRGMTGSAQHA*AQERPK Trigger: CTTGGGCCTTTCCTGAGCTCAGGCATGTTGGGCACT...TCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR GCA 90 bp | TACGAGCATTCACAGTGGAGGGAAAGAATGTGCAGGGAGCGGTCAGCACCAGTGGGAGCAATAGCTCTTTaGTTGCAAAGCCTGAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: YEHSQWRERMCRERSAPVGAIAL*LQSLKW Trigger: CCACTTCAGGCTTTGCAAGCAAAGAGCTATTGCTCC...CACTGGTGCTGACCGCTCCCTGCACATTCTTTCCCTCCACTGTGAATGCTCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | GACCTGGAAGGGATCACTGTCATTGCTAGAGGCGATATGCTGGCTCCTTGCTTCGGTGGGTCACAGTCATaGACTTTCACAGGTGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: DLEGITVIARGDMLAPCFGGSQS*TFTGEC Trigger: GCATTCACCTGTGAAAGTCCATGACTGTGACCCACC...GAAGCAAGGAGCCAGCATATCGCCTCTAGCAATGACAGTGATCCCTTCCAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | ATACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATGAGCCCAGCTCCATCGGTGGGTCACAGTCATaGACTTTCACAGGTGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: IPEFRGMTGVEQHEPSSIGGSQS*TFTGEC Trigger: GCATTCACCTGTGAAAGTCCATGACTGTGACCCACC...GATGGAGCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | TACGAGCATTCACAGTGGAGGGAAAGAATGTGCAGGGAGCGGTCAGCACCAGTGCAAGAGGAAAGGCCATaGCAGATGTGGGATGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: YEHSQWRERMCRERSAPVQEERP*QMWDVT Trigger: TGTTACATCCCACATCTGCCATGGCCTTTCCTCTTG...CACTGGTGCTGACCGCTCCCTGCACATTCTTTCCCTCCACTGTGAATGCTCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR TCA 90 bp | ATACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATGAGCCCAGCTCCATCGAGGGAACACAACAGTaGGCATTCGTGAAGGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: IPEFRGMTGVEQHEPSSIEGTQQ*AFVKEN Trigger: GTTTTCCTTCACGAATGCTCACTGTTGTGTTCCCTC...GATGGAGCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCACTAAGAACAACATTTTAAAGCTCAGAGCAGCTGCGCAGAGCACAGCCATGAGTGCCCAACATGCCTaGGCTCAGGAAAGGCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: FTKNNILKLRAAAQSTAMSAQHA*AQERPK Trigger: CTTGGGCCTTTCCTGAGCTCAGGCATGTTGGGCACT...CATGGCTGTGCTCTGCGCAGCTGCTCTGAGCTTTAAAATGTTGTTCTTAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR GCA 90 bp | ACACACACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTGGATCTCTTGCAATACTCCTaGCTCATCCTCCACCATCTC | + |
|
Preference number: 2 (lower is better) Translates to: THTSHPHDSHFLFQEQLDLLQYS*LILHHL Trigger: GAGATGGTGGAGGATGAGGCAGGAGTATTGCAAGAG...ATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGTGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTAAGAGCTTCTGTTCTGGTGTCGGGCCCCTCATTCCCAGGGACACAGCATAGGAAAACTCCATGTTaGTTATTTCACCTCAAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PLRASVLVSGPSFPGTQHRKTPC*LFHLKG Trigger: CCCCTTGAGGTGAAATAACCAACATGGAGTTTTCCT...ATGCTGTGTCCCTGGGAATGAGGGGCCCGACACCAGAACAGAAGCTCTTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCATTCCCAGGGACACAGCATCCTTGCTGCTTGATGCTAGCAACTATTTCTGGGAGGAAGAGCAGGTaGGTCACAGTCATGGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: PSFPGTQHPCCLMLATISGRKSR*VTVMDF Trigger: AAAGTCCATGACTGTGACCCACCTGCTCTTCCTCCC...AGAAATAGTTGCTAGCATCAAGCAGCAAGGATGCTGTGTCCCTGGGAATGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGCCACTATGGAGAAAGGAAAAACCCAGAGGACTACAAGGGTTTAGACAGGAATGGTGGGCAGATGGATaGATGGAGGGTTGCTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: RPLWRKEKPRGLQGFRQEWWADG*MEGCWE Trigger: CTCCCAGCAACCCTCCATCCATCCATCTGCCCACCA...TTCCTGTCTAAACCCTTGTAGTCCTCTGGGTTTTTCCTTTCTCCATAGTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACTGTCCAACTCTTCAGTAACAGCCTTTCACCAAGGGCCTTCTCCAGACTGCAGCCATTTAGATACCTaGCCATCTAGCTGCCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: KLSNSSVTAFHQGPSPDCSHLDT*PSSCLT Trigger: GGTCAGGCAGCTAGATGGTCAGGTATCTAAATGGCT...GCAGTCTGGAGAAGGCCCTTGGTGAAAGGCTGTTACTGAAGAGTTGGACAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | CACAGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGATCTCCCCCTGGTGGCTaGAGAAAGAACAGAGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: HRWLQLKIRIPEFRGMTGSPPGG*RKNRVS Trigger: ACTGACTCTGTTCTTTCTCCAGCCACCAGGGGGAGA...TCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | TGTAAATTACCTTGTACGAGCATTCACAGTGGAGGGAAAGAATGTGCAGGGAGCTGGCTTGTCTCCCCCTaGTGGCTGGAGAAAGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: CKLPCTSIHSGGKECAGSWLVSP*WLEKEQ Trigger: CTGTTCTTTCTCCAGCCACCAGGGGGAGACAAGCCA...GCTCCCTGCACATTCTTTCCCTCCACTGTGAATGCTCGTACAAGGTAATTTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAACAGCACGAGAAAGGCTTCTCTCTATGCAACATGAGTTTTCATACTTGTTCCAGCTCCTGTGGCTaGCACTGCCTCTCTCTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: GQQHEKGFSLCNMSFHTCSSSCG*HCLSLS Trigger: GCTAAGAGAGAGGCAGTGCCAGCCACAGGAGCTGGA...ACAAGTATGAAAACTCATGTTGCATAGAGAGAAGCCTTTCTCGTGCTGTTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGACCCAAATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATCCAGTGTGCCCCAAATaGATCCTACTTATTTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RDPNGNTKAPCCNCSPAHPVCPK*ILLISS Trigger: ACTTGAAATAAGTAGGATCCATTTGGGGCACACTGG...ATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATTTGGGTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTGGATAATCAGTGTTATTCCTTTCTCTaGTGGTGGGCAGATGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: TSHPHDSHFLFQEQLDNQCYSFL*WWADGW Trigger: CCATCCATCTGCCCACCATCAGAGAAAGGAATAACA...CTGATTATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAAATTACCTTGTACGAGCATTCACAGTGGAGGGAAAGAATGTGCAGGGAGCCACAGCCATGCAAAGTaGGGCCACTATGGAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: CKLPCTSIHSGGKECAGSHSHAK*GHYGER Trigger: CCTTTCTCCATAGTGGCCTCACTTTGCATGGCTGTG...GCTCCCTGCACATTCTTTCCCTCCACTGTGAATGCTCGTACAAGGTAATTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | CCAAGGGCCTTCTCCAGACTGCCCAGCACCGCACTGTGTGTTAAGACACAGACCTACTATTCAGAAATTTaGAGTCCAAGCAGAAACTGT | + |
|
Preference number: 2 (lower is better) Translates to: PRAFSRLPSTALCVKTQTYYSEI*SPSRNC Trigger: ACAGTTTCTGCTTGGACTCCAAATTTCTGAATAGTA...GGTCTGTGTCTTAACACACAGTGCGGTGCTGGGCAGTCTGGAGAAGGCCCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR GCA 90 bp | CAATCCCTCTGTCTTTCTACCACTTGTCCCCGATTCAGTGCTGGCAGGAGCCCCACTCTTCTACAAGGTTaGCTGTTTTTCTTTGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: QSLCLSTTCPRFSAGRSPTLLQG*LFFFES Trigger: ACTTTCAAAGAAAAACAGGCAACCTTGTAGAAGAGT...GGGGCTCCTGCCAGCACTGAATCGGGGACAAGTGGTAGAAAGACAGAGGGATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCACTATGGAGAAAGGAAAAACCCAGAGGACTACAAGGGTTTAGACAGGAACAAGACGTCCCAGTGTaGCCCAAATGGATCCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: RPLWRKEKPRGLQGFRQEQDVPV*PKWILL Trigger: AAGTAGGATCCATTTGGGGCACACTGGGACGTCTTG...TTCCTGTCTAAACCCTTGTAGTCCTCTGGGTTTTTCCTTTCTCCATAGTGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTGGTTGAAAGGAAAACTCCATGTTaGTTATTTCACCTCAAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: NGNTKAPCCNCSPAHVVERKTPC*LFHLKG Trigger: CCCCTTGAGGTGAAATAACCAACATGGAGTTTTCCT...TTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAACAGCACGAGAAAGGCTTCTCTCTATGCAACATGAGTTTTCATACTTGTGGGAGGAAGAGCAGGTaGGTCACAGTCATGGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: GQQHEKGFSLCNMSFHTCGRKSR*VTVMDF Trigger: AAAGTCCATGACTGTGACCCACCTGCTCTTCCTCCC...ACAAGTATGAAAACTCATGTTGCATAGAGAGAAGCCTTTCTCGTGCTGTTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTGGTTGAACCAGTGTGCCCCAAATaGATCCTACTTATTTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NGNTKAPCCNCSPAHVVEPVCPK*ILLISS Trigger: ACTTGAAATAAGTAGGATCCATTTGGGGCACACTGG...TTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCACTATGGAGAAAGGAAAAACCCAGAGGACTACAAGGGTTTAGACAGGAATGTTATTCCTTTCTCTaGTGGTGGGCAGATGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: RPLWRKEKPRGLQGFRQECYSFL*WWADGW Trigger: CCATCCATCTGCCCACCATCAGAGAAAGGAATAACA...TTCCTGTCTAAACCCTTGTAGTCCTCTGGGTTTTTCCTTTCTCCATAGTGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTAAATGTGCAAGCAGTTTTCAAAATGTCGAAGGACAAAGCACACAGCTGCCTGATGGTGGGCAGATaGATGGATGGAGGGTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ILNVQAVFKMSKDKAHSCLMVGR*MDGGLL Trigger: CAGCAACCCTCCATCCATCCATCTGCCCACCATCAG...GCAGCTGTGTGCTTTGTCCTTCGACATTTTGAAAACTGCTTGCACATTTAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCTTAAATGTGCAAGCAGTTTTCAAAATGTCGAAGGACAAAGCACACAGCTGCCACAGCCATGCAAAGTaGGGCCACTATGGAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ILNVQAVFKMSKDKAHSCHSHAK*GHYGER Trigger: CCTTTCTCCATAGTGGCCTCACTTTGCATGGCTGTG...GCAGCTGTGTGCTTTGTCCTTCGACATTTTGAAAACTGCTTGCACATTTAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTTCCTGAGGTAAATACAAGCCTTAAAGAATGGTGTACAGTGTGCAGAAGGGGGACTTCCAACAAGTaGAGAGGTGACACCAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: MFPEVNTSLKEWCTVCRRGTSNK*RGDTSW Trigger: CCAACTGGTGTCACCTCTTCACTTGTTGGAAGTCCC...CCTTCTGCACACTGTACACCATTCTTTAAGGCTTGTATTTACCTCAGGAAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR TCA 90 bp | TTCACTAAGAACAACATTTTAAAGCTCAGAGCAGCTGCGCAGAGCACAGCCATGACACCTAGTTATACATaGGGGAACACAACAGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FTKNNILKLRAAAQSTAMTPSYT*GNTTVS Trigger: GCTCACTGTTGTGTTCCCTCATGTATAACTAGGTGT...CATGGCTGTGCTCTGCGCAGCTGCTCTGAGCTTTAAAATGTTGTTCTTAGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR GCA 90 bp | CACAGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGAACACAGCATCCTTGCTaGTTGATGCTAGCAACTATT | + |
|
Preference number: 2 (lower is better) Translates to: HRWLQLKIRIPEFRGMTGTQHPC*LMLATI Trigger: AATAGTTGCTAGCATCAAGCAGCAAGGATGCTGTGT...TCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCTTAAATGTGCAAGCAGTTTTCAAAATGTCGAAGGACAAAGCACACAGCTGCCAGCGTCTCAAGATCTaGGAATCAGCAAGTGACCTG | + |
|
Preference number: 2 (lower is better) Translates to: ILNVQAVFKMSKDKAHSCQRLKI*ESASDL Trigger: CAGGTCACTTGCTGATTCTCAGATCTTGAGACGCTG...GCAGCTGTGTGCTTTGTCCTTCGACATTTTGAAAACTGCTTGCACATTTAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGCAACAGCACGAGAAAGGCTTCTCTCTATGCAACATGAGTTTTCATACTTGTACACCTAGTTATACATaGGGGAACACAACAGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: GQQHEKGFSLCNMSFHTCTPSYT*GNTTVS Trigger: GCTCACTGTTGTGTTCCCTCATGTATAACTAGGTGT...ACAAGTATGAAAACTCATGTTGCATAGAGAGAAGCCTTTCTCGTGCTGTTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTTCCTGAGGTAAATACAAGCCTTAAAGAATGGTGTACAGTGTGCAGAAGGGGGACACAGCATCCTTaGTGCTTGATGCTAGCAACT | + |
|
Preference number: 2 (lower is better) Translates to: MFPEVNTSLKEWCTVCRRGTQHP*CLMLAT Trigger: AGTTGCTAGCATCAAGCAGCAAGGATGCTGTGTCCC...CCTTCTGCACACTGTACACCATTCTTTAAGGCTTGTATTTACCTCAGGAAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | AATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTGGTTGAATACTATTCAGAAATTTaGAGTCCAAGCAGAAACTGT | + |
|
Preference number: 2 (lower is better) Translates to: NGNTKAPCCNCSPAHVVEYYSEI*SPSRNC Trigger: ACAGTTTCTGCTTGGACTCCAAATTTCTGAATAGTA...TTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTAAATGTGCAAGCAGTTTTCAAAATGTCGAAGGACAAAGCACACAGCTGCATCCTCCACCATCTCTaGCTACTAACTGTACAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: ILNVQAVFKMSKDKAHSCILHHL*LLTVQA Trigger: AGCCTGTACAGTTAGTAGCCAGAGATGGTGGAGGAT...GCAGCTGTGTGCTTTGTCCTTCGACATTTTGAAAACTGCTTGCACATTTAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR CAA 90 bp | CTCACATCACTCTTCTACAAGGTTGCCTGTTTTTCTTTGAAAGTCTaGCCAAGTAATTCAATCCAGACTGGCCTCTCTCTTGCAATACTC | + |
|
Preference number: 2 (lower is better) Translates to: LTSLFYKVACFSLKV*PSNSIQTGLSLAIL Trigger: GAGTATTGCAAGAGAGAGGCCAGTCTGGATTGAATTACTTGGCAAGACTTTCAAAGAAAAACAGGCAACCTTGTAGAAGAGTGATGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CCA 90 bp | CACAGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGATACTATTCAGAAATTTaGAGTCCAAGCAGAAACTGT | + |
|
Preference number: 2 (lower is better) Translates to: HRWLQLKIRIPEFRGMTGYYSEI*SPSRNC Trigger: ACAGTTTCTGCTTGGACTCCAAATTTCTGAATAGTA...TCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR TCA 72 bp | GGCCCGCCTGCCTCTCCCACCACCTGTGGTGAGGACTaGGGACAGGGACGAGTCTCATGCAGGGTCCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GPPASPTTCGED*GQGRVSCRVPP Trigger: AGGAGGGACCCTGCATGAGACTCGTCCCTGTCCTCAGTCCTCACCACAGGTGGTGGGAGAGGCAGGCGGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR CCA 72 bp | GGGGCGAGAGGAGAGCAGAAGAAAGAGACGGGTCTGTaGAAGAGGGCCCGCCTGCCTCTCCCACCACCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GARGEQKKETGL*KRARLPLPPPV Trigger: CACAGGTGGTGGGAGAGGCAGGCGGGCCCTCTTCCACAGACCCGTCTCTTTCTTCTGCTCTCCTCTCGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR CCA 72 bp | CTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTaGTTGAACGAGGCGCAGCCTGGGCCCCGCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LKPPAVTALLPM*LNEAQPGPRTQ Trigger: CTGAGTGCGGGGCCCAGGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR TCA 72 bp | GTCTCATGCAGGGTCCCTCCTAGTGCCCAACATGCCTaGGCTCAGGAAAGGCCCAAGCTGGCCTTTCCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VSCRVPPSAQHA*AQERPKLAFPS Trigger: AGACGGAAAGGCCAGCTTGGGCCTTTCCTGAGCTCAGGCATGTTGGGCACTAGGAGGGACCCTGCATGAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR TCA 72 bp | GAGCAGAGCCCAGTAGCTCCCAGGATAGAGAGACACTaGGAGCAGAGCCCAGCAGCTCCCGGGATAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: EQSPVAPRIERH*EQSPAAPGIET Trigger: TGTCTCTATCCCGGGAGCTGCTGGGCTCTGCTCTCAGTGTCTCTCTATCCTGGGAGCTACTGGGCTCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR TCA 72 bp | GCACACACCAGGGGAGGGGAGGACGCTCTAAAGTGCTaGCGAAGGCTGGAAGACGAACTCAGAAATGCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: AHTRGGEDALKC*RRLEDELRNAS Trigger: GGAGGCATTTCTGAGTTCGTCTTCCAGCCTTCGTCAGCACTTTAGAGCGTCCTCCCCTCCCCTGGTGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR GCA 72 bp | ATGAGCTTCAGGTTCTCCAGCTCCTGTGGCTGGCACTaGCTCTCTCTTAGCACTGGCTTGTCTCCCCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: MSFRFSSSCGWH*LSLSTGLSPPG Trigger: ACCAGGGGGAGACAAGCCAGTGCTAAGAGAGAGGCAGTGCCAGCCACAGGAGCTGGAGAACCTGAAGCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR CCA 72 bp | GTGCCCAACATGCCTGAGCTCAGGAAAGGCCCAAGCTaGCCTTTCCGTCTGAATGGTGTGACTGAGCGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VPNMPELRKGPS*PFRLNGVTERT Trigger: TGTGCGCTCAGTCACACCATTCAGACGGAAAGGCCAGCTTGGGCCTTTCCTGAGCTCAGGCATGTTGGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR TCA 72 bp | ACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATaGGCCCAGCTCCATCAGCTCCATCCAGTCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TRVQRDDRSRAT*AQLHQLHPVLW Trigger: CCACAGGACTGGATGGAGCTGATGGAGCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR TCA 72 bp | CATGGAGAAGTAAAGCGGCAGTGCGTAGAGAGACACTaGGAGCGGAGTCCAGCAGCTCCCAGGATAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: HGEVKRQCVERH*ERSPAAPRIET Trigger: TGTCTCTATCCTGGGAGCTGCTGGACTCCGCTCTCAGTGTCTCTCTACGCACTGCCGCTTTACTTCTCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR GCA 72 bp | GTGTCGGGCCCCTCATTCCCAGGGACACAGCATCCTTaGTGCTTGATGCTAGCAACTATTTCTAGGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VSGPSFPGTQHP*CLMLATISRAE Trigger: CTCTGCCCTAGAAATAGTTGCTAGCATCAAGCAGCAAGGATGCTGTGTCCCTGGGAATGAGGGGCCCGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR GCA 72 bp | GACCTGAGGGACCCAAATGGGAACACTAAAGCCCCCTaGTGTAACTGCTCTCCTGCCCATGTGGTTGAACGA | + |
|
Preference number: 3 (lower is better) Translates to: DLRDPNGNTKAP*CNCSPAHVVER Trigger: TCGTTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATTTGGGTCCCTCAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR GCA 72 bp | TCAGTAACAGCCTTTCACCAAGGGCCTTCTCCAGACTaGCCAGCACCGCACTGTGTGTTAAGACACAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: SVTAFHQGPSPD*PAPHCVLRHRP Trigger: GGGTCTGTGTCTTAACACACAGTGCGGTGCTGGGCAGTCTGGAGAAGGCCCTTGGTGAAAGGCTGTTACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR GCA 72 bp | ACCTTGTACGAGCATTCACAGTGGAGGGAAAGAATGTaGAGGGAGCGGTCAGCACCAGTGCAGGGAGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: TLYEHSQWRERM*RERSAPVQGAN Trigger: GTTAGCTCCCTGCACTGGTGCTGACCGCTCCCTGCACATTCTTTCCCTCCACTGTGAATGCTCGTACAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR CCA 72 bp | TCAAGTCAGCTGAGCCCAGGGCAAGAGGAAAGGCCATaGCAGATGTGGGATGTAACAAAGAGTGGGGCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SSQLSPGQEERP*QMWDVTKSGAR Trigger: TCTCGCCCCACTCTTTGTTACATCCCACATCTGCCATGGCCTTTCCTCTTGCCCTGGGCTCAGCTGACTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGACCCAAATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATAGGGACACAGCATCCTaGCTGCTTGATGCTAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: RDPNGNTKAPCCNCSPAHRDTAS*LLDASN Trigger: GTTGCTAGCATCAAGCAGCAAGGATGCTGTGTCCCT...ATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATTTGGGTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR CCA 72 bp | CTCTCTCTTAGCACTGGCTTGTCTCCCCCTGGTGGCTaGAGAAAGAACAGAGTCAGTGTCCTAAAAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLSTGLSPPGG*RKNRVSVLKGQ Trigger: CTGCCCTTTTAGGACACTGACTCTGTTCTTTCTCCAGCCACCAGGGGGAGACAAGCCAGTGCTAAGAGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR CCA 72 bp | GGAAAGGCCATGGCAGATGTGGGATGTAACAAAGAGTaGGGCGAGAGGAGAGCAGAAGAAAGAGACGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GKAMADVGCNKE*GERRAEERDGS Trigger: AGACCCGTCTCTTTCTTCTGCTCTCCTCTCGCCCCACTCTTTGTTACATCCCACATCTGCCATGGCCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR CCA 72 bp | ATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTaGATAATCAGATGTGCTAGGCGTGAGGGAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ILMTPTFCSRSS*IIRCARREGAS Trigger: TGAGGCTCCCTCACGCCTAGCACATCTGATTATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR CCA 72 bp | ATGGGAGGCAGCATGAGAGAACCTACTGAGCTGACCTaGAAGGGATCACTGTCATTGCTAGAGGCGATATGC | + |
|
Preference number: 3 (lower is better) Translates to: MGGSMREPTELT*KGSLSLLEAIC Trigger: GCATATCGCCTCTAGCAATGACAGTGATCCCTTCCAGGTCAGCTCAGTAGGTTCTCTCATGCTGCCTCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGAATACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATGAGCCCAGCAGACTGGCCTCTCTCTaGCAATACTCCTGCCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: IRIPEFRGMTGVEQHEPSRLASL*QYSCLI Trigger: GATGAGGCAGGAGTATTGCAAGAGAGAGGCCAGTCT...GCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGTATTCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR TCA 72 bp | GAAGGACAGCAGCCTTACTCTCAGCATCTGGACTCGTaGGTTAAGATGCTGGCAAAGCCACAGACGACATTG | + |
|
Preference number: 3 (lower is better) Translates to: EGQQPYSQHLDS*VKMLAKPQTTL Trigger: CAATGTCGTCTGTGGCTTTGCCAGCATCTTAACTCACGAGTCCAGATGCTGAGAGTAAGGCTGCTGTCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR CCA 72 bp | AGTGTGCAGAAGGACAGCAGCCTTACTCTCAGCATCTaGACTCGTGAGTTAAGATGCTGGCAAAGCCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SVQKDSSLTLSI*TRELRCWQSHR Trigger: TCTGTGGCTTTGCCAGCATCTTAACTCACGAGTCCAGATGCTGAGAGTAAGGCTGCTGTCCTTCTGCACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR CCA 72 bp | AGGCGATATGCTGGCTCCTTGCTTCCTAGCTTCAAATaGCAATCCCTCTGTCTTTCTACCACTTGTCCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: RRYAGSLLPSFK*QSLCLSTTCPR Trigger: TCGGGGACAAGTGGTAGAAAGACAGAGGGATTGCCATTTGAAGCTAGGAAGCAAGGAGCCAGCATATCGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR TCA 72 bp | CGTGAGTTAAGATGCTGGCAAAGCCACAGACGACATTaGCATGGAGAAGTAAAGCGGCAGTGCGTAGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RELRCWQSHRRH*HGEVKRQCVER Trigger: TCTCTCTACGCACTGCCGCTTTACTTCTCCATGTCAATGTCGTCTGTGGCTTTGCCAGCATCTTAACTCACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR GCA 72 bp | AAAGTGCTGACGAAGGCTGGAAGACGAACTCAGAAATaGCTCCAGGGACTTCCAACAAGTGAAGAGGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: KVLTKAGRRTQK*LQGLPTSEEVT Trigger: TGTCACCTCTTCACTTGTTGGAAGTCCCTGGAGGCATTTCTGAGTTCGTCTTCCAGCCTTCGTCAGCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR CCA 72 bp | GTTAAGATGCTGGCAAAGCCACAGACGACATTGACATaGAGAAGTAAAGCGGCAGTGCGTAGAGAGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: VKMLAKPQTTLT*RSKAAVRRETL Trigger: CAGTGTCTCTCTACGCACTGCCGCTTTACTTCTCCATGTCAATGTCGTCTGTGGCTTTGCCAGCATCTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR-3UTR CAA 90 bp | GGATGTAACAAAGAGTGGGGCGAGAGGAGAGCAGAAGAAAGAGACGGGTCTGTGAAGGAAAACTCCATGTaGGTTATTTCACCTCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GCNKEWGERRAEERDGSVKENSM*VISPQG Trigger: CCCTTGAGGTGAAATAACCAACATGGAGTTTTCCTT...CACAGACCCGTCTCTTTCTTCTGCTCTCCTCTCGCCCCACTCTTTGTTACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGTCCAACTCTTCAGTAACAGCCTTTCACCAAGGGCCTTCTCCAGACTGCAGGAGCAATAGCTCTTaGCTTGCAAAGCCTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KLSNSSVTAFHQGPSPDCRSNSS*LAKPEV Trigger: CACTTCAGGCTTTGCAAGCAAAGAGCTATTGCTCCT...GCAGTCTGGAGAAGGCCCTTGGTGAAAGGCTGTTACTGAAGAGTTGGACAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR GCA 72 bp | ATTCAATCCAGACTGGCCTCTCTCTTGCAATACTCCTaGCTCATCCTCCACCATCTCTGGCTACTAACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: IQSRLASLLQYS*LILHHLWLLTV Trigger: TACAGTTAGTAGCCAGAGATGGTGGAGGATGAGGCAGGAGTATTGCAAGAGAGAGGCCAGTCTGGATTGAAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR GCA 72 bp | GACAAAGCACACAGCTGCACTAAGAATTTCAATGAATaGAGAGGTCTGTACCGGATCACGAAGCCAGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: DKAHSCTKNFNE*RGLYRITKPGF Trigger: GAACCCTGGCTTCGTGATCCGGTACAGACCTCTGCATTCATTGAAATTCTTAGTGCAGCTGTGTGCTTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGAATACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATGAGCCCAGCAAGGAAAACTCCATGTaGGTTATTTCACCTCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IRIPEFRGMTGVEQHEPSKENSM*VISPQG Trigger: CCCTTGAGGTGAAATAACCAACATGGAGTTTTCCTT...GCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGTATTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR TCA 72 bp | CAACCGTTATGGGATAGGTATTTAAAAGTCATCCTTTaGGTTCCAGGTAGCACAGGTGGCTGCAGCTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QPLWDRYLKVIL*VPGSTGGCSSK Trigger: TTTTGAGCTGCAGCCACCTGTGCTACCTGGAACTCAAAGGATGACTTTTAAATACCTATCCCATAACGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR CCA 72 bp | TGCTCTGCTGAGAGACTAAAGAAACCAGACACATTCTaGGACCCTGAGGCTTCACCTCTTCATTTTATTACT | + |
|
Preference number: 3 (lower is better) Translates to: CSAERLKKPDTF*DPEASPLHFIT Trigger: AGTAATAAAATGAAGAGGTGAAGCCTCAGGGTCCCAGAATGTGTCTGGTTTCTTTAGTCTCTCAGCAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGAGTTGCCTGTTTTTCTTaGAAAGTCTTGCCAAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: HRWLQLKIRIPEFRGMTGVACFS*KVLPSN Trigger: ATTACTTGGCAAGACTTTCAAAGAAAAACAGGCAAC...TCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR CCA 72 bp | CAACTAAATTCATCTTCAAAAGGTTTACAAAAACGCTaGGGACTTAGCTCCATGGGAGGCAGCATGAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QLNSSSKGLQKR*GLSSMGGSMRE Trigger: TTCTCTCATGCTGCCTCCCATGGAGCTAAGTCCCCAGCGTTTTTGTAAACCTTTTGAAGATGAATTTAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR TCA 72 bp | AACTTACACATGAGGGAACACAACAGTGAGCATTCGTaGAGGAAAACTCCATGTTGGTTATTTCACCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: NLHMREHNSEHS*RKTPCWLFHLK Trigger: CTTGAGGTGAAATAACCAACATGGAGTTTTCCTTCACGAATGCTCACTGTTGTGTTCCCTCATGTGTAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR TCA 72 bp | TCACATCACTCTTCTACAAGGTTGCCTGTTTTTCTTTaGAAGTCTTGCCAAGTAATTCAATCCAGACTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SHHSSTRLPVFL*KSCQVIQSRLA Trigger: GGCCAGTCTGGATTGAATTACTTGGCAAGACTTTCAAAGAAAAACAGGCAACCTTGTAGAAGAGTGATGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR CCA 72 bp | AATATGTTTCCTGAGGTAAATACAAGCCTTAAAGAATaGTGTACAGTGTGCAGAAGGACAGCAGCCTTACTC | + |
|
Preference number: 3 (lower is better) Translates to: NMFPEVNTSLKE*CTVCRRTAALL Trigger: GAGTAAGGCTGCTGTCCTTCTGCACACTGTACACCATTCTTTAAGGCTTGTATTTACCTCAGGAAACATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR TCA 72 bp | GACAAACACCTAGTTATACATGAGGGAACACAACAGTaGGCATTCGTGAAGGAAAACTCCATGTTGGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: DKHLVIHEGTQQ*AFVKENSMLVI Trigger: AATAACCAACATGGAGTTTTCCTTCACGAATGCTCACTGTTGTGTTCCCTCATGTATAACTAGGTGTTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR CAA 72 bp | AAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTGGTaGAACGAGGCGCAGCCTGGGCCCCGCACTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPPAVTALLPMW*NEAQPGPRTQA Trigger: AGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGCAGGAAGCCGCTTAGTGGGGTGCAGGCTCCCGGGGGCCAGGCTCTTTACTAGCACTGCTACTTaGAGTAGGACGCTTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVAGSRLVGCRLPGARLFTSTAT*SRTLPA Trigger: GGCGGGAAGCGTCCTACTGCAAGTAGCAGTGCTAGT...AAAGAGCCTGGCCCCCGGGAGCCTGCACCCCACTAAGCGGCTTCCTGCCACCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTACTAGCACTGCTACTTaGAGTAGGACGCTTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALLPMWLNEAQPGPRTQATSTAT*SRTLPA Trigger: GGCGGGAAGCGTCCTACTGCAAGTAGCAGTGCTAGT...AGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTCATTCACAACTGCTTTaGAGGCATCTTCACTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLPMWLNEAQPGPRTQAHSQLL*RHLHCL Trigger: CAGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATG...AGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | CATGCAGGGTCCCTCCTAGTGCCCAACATGCCTGAGCTCAGGAAAGGCCCAAGCATTAACTTCCTCCCTTaGGGCTCCAGGTCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HAGSLLVPNMPELRKGPSINFLP*GSRSDS Trigger: GGAGTCAGACCTGGAGCCTCAAGGGAGGAAGTTAAT...GCTTGGGCCTTTCCTGAGCTCAGGCATGTTGGGCACTAGGAGGGACCCTGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGGCAGGAAGCCGCTTAGTGGGGTGCAGGCTCCCGGGGGCCAGGCTCTTTGTCAATCCCGATGGTTaGCAGGTATTTAGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVAGSRLVGCRLPGARLFVNPDG*QVFRHK Trigger: TTTGTGTCTAAATACCTGGCAACCATCGGGATTGAC...AAAGAGCCTGGCCCCCGGGAGCCTGCACCCCACTAAGCGGCTTCCTGCCACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | AGGGACCCAAATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATTTGAGGCTCCAGGTCTaGCTCCTAGCATCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RDPNGNTKAPCCNCSPAHLRLQV*LLASPS Trigger: GCTGGGAGATGCTAGGAGTCAGACCTGGAGCCTCAA...ATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATTTGGGTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | CAATCCCTCTGTCTTTCTACCACTTGTCCCCGATTCAGTGCTGGCAGGAGCCCCATTAACTTCCTCCCTTaGGGCTCCAGGTCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSLCLSTTCPRFSAGRSPINFLP*GSRSDS Trigger: GGAGTCAGACCTGGAGCCTCAAGGGAGGAAGTTAAT...GGGGCTCCTGCCAGCACTGAATCGGGGACAAGTGGTAGAAAGACAGAGGGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS-3UTR GCA 90 bp | AAGCCGCTTAGTGGGGTGCAGGCTCCCGGGGGCCAGGCTCTTTCTCTCTCCTGTGTCAATCCCGATGGTTaGCAGGTATTTAGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KPLSGVQAPGGQALSLSCVNPDG*QVFRHK Trigger: TTTGTGTCTAAATACCTGGCAACCATCGGGATTGAC...ACAGGAGAGAGAAAGAGCCTGGCCCCCGGGAGCCTGCACCCCACTAAGCGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | AGGGACCCAAATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATATCTTCACTGCCTGGTaGTACACACTTGTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDPNGNTKAPCCNCSPAHIFTAW*YTLVRV Trigger: CACCCGGACAAGTGTGTAGCACCAGGCAGTGAAGAT...ATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATTTGGGTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | GACCTGGAAGGGATCACTGTCATTGCTAGAGGCGATATGCTGGCTCCTTGCTTCAGTACAGGAACCCTTTaGTTTCAGCCCAGAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLEGITVIARGDMLAPCFSTGTL*FQPRDA Trigger: GGCGTCTCTGGGCTGAAAGCAAAGGGTTCCTGTACT...GAAGCAAGGAGCCAGCATATCGCCTCTAGCAATGACAGTGATCCCTTCCAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS-3UTR GCA 90 bp | GGATGTAACAAAGAGTGGGGCGAGAGGAGAGCAGAAGAAAGAGACGGGTCTGTGAGTACAGGAACCCTTTaGTTTCAGCCCAGAGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: GCNKEWGERRAEERDGSVSTGTL*FQPRDA Trigger: GGCGTCTCTGGGCTGAAAGCAAAGGGTTCCTGTACT...CACAGACCCGTCTCTTTCTTCTGCTCTCCTCTCGCCCCACTCTTTGTTACATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | CGGGGGCCAGGCTCTTTCTCTCTCCTGTTGTTATTCCTTTCTCTGATGGTGGGCTCTGGAACATCTCGTTaGTTCCCTCTCCAGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGPGSFSLLLLFLSLMVGSGTSR*FPLQFV Trigger: CACAAACTGGAGAGGGAATCAACGAGATGTTCCAGA...GCCCACCATCAGAGAAAGGAATAACAACAGGAGAGAGAAAGAGCCTGGCCCCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | AGGGACCCAAATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATTCTGGAACATCTCGTTaGTTCCCTCTCCAGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDPNGNTKAPCCNCSPAHSGTSR*FPLQFV Trigger: CACAAACTGGAGAGGGAATCAACGAGATGTTCCAGA...ATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATTTGGGTCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | ACACACACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTGGATATTAACTTCCTCCCTTaGGGCTCCAGGTCTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: THTSHPHDSHFLFQEQLDINFLP*GSRSDS Trigger: GGAGTCAGACCTGGAGCCTCAAGGGAGGAAGTTAAT...ATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCCATGGCAGATGTGGGATGTAACAAAGAGTGGGGCGAGAGGAGAGCAGCATTCACAACTGCTTTaGAGGCATCTTCACTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERPWQMWDVTKSGARGEQHSQLL*RHLHCL Trigger: CAGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATG...CTGCTCTCCTCTCGCCCCACTCTTTGTTACATCCCACATCTGCCATGGCCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CCA 90 bp | CATGCAGGGTCCCTCCTAGTGCCCAACATGCCTGAGCTCAGGAAAGGCCCAAGCCACACAAGTCAACTATaGACAAGTAAAAGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HAGSLLVPNMPELRKGPSHTSQL*TSKRSG Trigger: TCCAGACCTTTTACTTGTCCATAGTTGACTTGTGTG...GCTTGGGCCTTTCCTGAGCTCAGGCATGTTGGGCACTAGGAGGGACCCTGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | AGGCCACTATGGAGAAAGGAAAAACCCAGAGGACTACAAGGGTTTAGACAGGAATTGAGGCTCCAGGTCTaGCTCCTAGCATCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLWRKEKPRGLQGFRQELRLQV*LLASPS Trigger: GCTGGGAGATGCTAGGAGTCAGACCTGGAGCCTCAA...TTCCTGTCTAAACCCTTGTAGTCCTCTGGGTTTTTCCTTTCTCCATAGTGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | AAAACTCCATGTTGGTTATTTCACCTCAAGGGGAGTCTGTTTGCACTTGAGCTCTTGAGGCTCCAGGTCTaGCTCCTAGCATCTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KTPCWLFHLKGSLFALELLRLQV*LLASPS Trigger: GCTGGGAGATGCTAGGAGTCAGACCTGGAGCCTCAA...GAGCTCAAGTGCAAACAGACTCCCCTTGAGGTGAAATAACCAACATGGAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR CAA 72 bp | TCTTGCCAAGTAATTCAATCCAGACTGGCCTCTCTCTaGCAATACTCCTGCCTCATCCTCCACCATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCQVIQSRLASL*QYSCLILHHLW Trigger: CCAGAGATGGTGGAGGATGAGGCAGGAGTATTGCAAGAGAGAGGCCAGTCTGGATTGAATTACTTGGCAAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS-3UTR TCA 90 bp | CCCTCATTCCCAGGGACACAGCATCCTTGCTGCTTGATGCTAGCAACTATTTCTTCTGGAACATCTCGTTaGTTCCCTCTCCAGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSFPGTQHPCCLMLATISSGTSR*FPLQFV Trigger: CACAAACTGGAGAGGGAATCAACGAGATGTTCCAGA...AGAAATAGTTGCTAGCATCAAGCAGCAAGGATGCTGTGTCCCTGGGAATGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | ATACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATGAGCCCAGCTCCATCGTCAATCCCGATGGTTaGCAGGTATTTAGACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: IPEFRGMTGVEQHEPSSIVNPDG*QVFRHK Trigger: TTTGTGTCTAAATACCTGGCAACCATCGGGATTGAC...GATGGAGCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGAATACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATGAGCCCAGCCCGGGCATTCACAACTaGTTTGAAGGCATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: IRIPEFRGMTGVEQHEPSPGIHN*FEGIFT Trigger: AGTGAAGATGCCTTCAAAGCAGTTGTGAATGCCCGG...GCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGTATTCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CCA 90 bp | AGGGACCCAAATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATCACACAAGTCAACTATaGACAAGTAAAAGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RDPNGNTKAPCCNCSPAHHTSQL*TSKRSG Trigger: TCCAGACCTTTTACTTGTCCATAGTTGACTTGTGTG...ATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATTTGGGTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | AGAAATGAAGTGCATAAGAGATGTGGGGTTATCTCTCACACAAAAGCGGTCATCACTAGCACTGCTACTTaGAGTAGGACGCTTCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RNEVHKRCGVISHTKAVITSTAT*SRTLPA Trigger: GGCGGGAAGCGTCCTACTGCAAGTAGCAGTGCTAGT...GATGACCGCTTTTGTGTGAGAGATAACCCCACATCTCTTATGCACTTCATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS-3UTR GCA 90 bp | ATACCAGAGTTCAGAGGGATGACAGGAGTCGAGCAACATGAGCCCAGCTCCATCTCTGCGAATAGTGTCTaGTTGTTCTTTGGTGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IPEFRGMTGVEQHEPSSISANSV*LFFGET Trigger: AGTTTCACCAAAGAACAAGCAGACACTATTCGCAGA...GATGGAGCTGGGCTCATGTTGCTCGACTCCTGTCATCCCTCTGAACTCTGGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | AGCATTCGTGAAGGAAAACTCCATGTTGGTTATTTCACCTCAAGGGGAGTCTGTATCTTCACTGCCTGGTaGTACACACTTGTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIREGKLHVGYFTSRGVCIFTAW*YTLVRV Trigger: CACCCGGACAAGTGTGTAGCACCAGGCAGTGAAGAT...ACAGACTCCCCTTGAGGTGAAATAACCAACATGGAGTTTTCCTTCACGAATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | GGGCAACAGCACGAGAAAGGCTTCTCTCTATGCAACATGAGTTTTCATACTTGTATCTTCACTGCCTGGTaGTACACACTTGTCCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQQHEKGFSLCNMSFHTCIFTAW*YTLVRV Trigger: CACCCGGACAAGTGTGTAGCACCAGGCAGTGAAGAT...ACAAGTATGAAAACTCATGTTGCATAGAGAGAAGCCTTTCTCGTGCTGTTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | ACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTGGATAATCAGCTCTCCAGTTTGTGCTaGTGTTTCAAAGTACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSHPHDSHFLFQEQLDNQLSSLC*CFKVQE Trigger: TTCCTGTACTTTGAAACATCAGCACAAACTGGAGAG...CTGATTATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGGCAACAGCACGAGAAAGGCTTCTCTCTATGCAACATGAGTTTTCATACTCATTCACAACTGCTTTaGAGGCATCTTCACTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGQQHEKGFSLCNMSFHTHSQLL*RHLHCL Trigger: CAGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATG...AGTATGAAAACTCATGTTGCATAGAGAGAAGCCTTTCTCGTGCTGTTGCCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | AATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTGGTTGAATCTGCGAATAGTGTCTaGTTGTTCTTTGGTGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: NGNTKAPCCNCSPAHVVESANSV*LFFGET Trigger: AGTTTCACCAAAGAACAAGCAGACACTATTCGCAGA...TTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | CACAGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGAATCAAGGGCATCAAATaGGTCTTTCTGTCCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: HRWLQLKIRIPEFRGMTGIKGIK*VFLSNI Trigger: GATGTTGGACAGAAAGACTCATTTGATGCCCTTGAT...TCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGAGTCATCAAGGGCATCAAATaGGTCTTTCTGTCCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: RWLQLKIRIPEFRGMTGVIKGIK*VFLSNI Trigger: GATGTTGGACAGAAAGACTCATTTGATGCCCTTGAT...GACTCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | ACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTGGATAATCAGTCTGCGAATAGTGTCTaGTTGTTCTTTGGTGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TSHPHDSHFLFQEQLDNQSANSV*LFFGET Trigger: AGTTTCACCAAAGAACAAGCAGACACTATTCGCAGA...CTGATTATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR GCA 90 bp | GGGCAACAGCACGAGAAAGGCTTCTCTCTATGCAACATGAGTTTTCATACTTGTCCGGGCATTCACAACTaGTTTGAAGGCATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GQQHEKGFSLCNMSFHTCPGIHN*FEGIFT Trigger: AGTGAAGATGCCTTCAAAGCAGTTGTGAATGCCCGG...ACAAGTATGAAAACTCATGTTGCATAGAGAGAAGCCTTTCTCGTGCTGTTGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR TCA 90 bp | TTGCCAAGTAATTCAATCCAGACTGGCCTCTCTCTTGCAATACTCCTGCCTCATCTCTCCAGTTTGTGCTaGTGTTTCAAAGTACAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSNSIQTGLSLAILLPHLSSLC*CFKVQE Trigger: TTCCTGTACTTTGAAACATCAGCACAAACTGGAGAG...ATGAGGCAGGAGTATTGCAAGAGAGAGGCCAGTCTGGATTGAATTACTTGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS-3UTR TCA 90 bp | AGAAATGAAGTGCATAAGAGATGTGGGGTTATCTCTCACACAAAAGCGGTCATCATCAAGGGCATCAAATaGGTCTTTCTGTCCAACATC | + |
|
Preference number: 4 (lower is better) Translates to: RNEVHKRCGVISHTKAVIIKGIK*VFLSNI Trigger: GATGTTGGACAGAAAGACTCATTTGATGCCCTTGAT...GATGACCGCTTTTGTGTGAGAGATAACCCCACATCTCTTATGCACTTCATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR CAA 72 bp | CTCTTCTACAAGGTTGCCTGTTTTTCTTTGAAAGTCTaGCCAAGTAATTCAATCCAGACTGGCCTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFYKVACFSLKV*PSNSIQTGLSL Trigger: AAGAGAGAGGCCAGTCTGGATTGAATTACTTGGCAAGACTTTCAAAGAAAAACAGGCAACCTTGTAGAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS-3UTR CCA 90 bp | ATCTTAAATGTGCAAGCAGTTTTCAAAATGTCGAAGGACAAAGCACACAGCTGCCACACAAGTCAACTATaGACAAGTAAAAGGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILNVQAVFKMSKDKAHSCHTSQL*TSKRSG Trigger: TCCAGACCTTTTACTTGTCCATAGTTGACTTGTGTG...GCAGCTGTGTGCTTTGTCCTTCGACATTTTGAAAACTGCTTGCACATTTAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| 3UTR CAA 72 bp | GCAATAGCTCTTTGCTTGCAAAGCCTGAAGTGGAAATaGCTTAGCTTGATTTTGCAACTAAATTCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AIALCLQSLKWK*LSLILQLNSSS Trigger: TGAAGATGAATTTAGTTGCAAAATCAAGCTAAGCAATTTCCACTTCAGGCTTTGCAAGCAAAGAGCTATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| 3UTR CAA 72 bp | CTTTGCTTGCAAAGCCTGAAGTGGAAATTGCTTAGCTaGATTTTGCAACTAAATTCATCTTCAAAAGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LCLQSLKWKLLS*ILQLNSSSKGL Trigger: TAAACCTTTTGAAGATGAATTTAGTTGCAAAATCAAGCTAAGCAATTTCCACTTCAGGCTTTGCAAGCAAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS-3UTR CAA 90 bp | ACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTGACAGCACCACACACACCTCTCCCCATGGAGATGACTTaGATGCGGAGGGACTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TRRSLGPALRLTAPHTPLPMEMT*MRRDLA Trigger: CGCCAAGTCCCTCCGCATCAAAGTCATCTCCATGGG...GAGAGGTGTGTGTGGTGCTGTCAGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCCCCATGGAGATGACTTaGATGCGGAGGGACTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KAPCCNCSPAHVVERGAAPMEMT*MRRDLA Trigger: CGCCAAGTCCCTCCGCATCAAAGTCATCTCCATGGG...GGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCTGGGCCCCGCACTCAGGCTGCATTCACAACTGCTTaGAAGGCATCTTCACTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALLPMWLNEAQPGPRTQAAFTTA*KASSLP Trigger: AGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGC...AGCCTGAGTGCGGGGCCCAGGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGGCAGGAAGCCGCTTAGTGGGGTGCAGGCTCCCGGGGGCCAGGCTCTTTTCAAAGATGTTAACTTaGATCTCTCTGTCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LVAGSRLVGCRLPGARLFSKMLT*ISLSLT Trigger: AGTCAGAGACAGAGAGATCAAAGTTAACATCTTTGA...AAAGAGCCTGGCCCCCGGGAGCCTGCACCCCACTAAGCGGCTTCCTGCCACCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | GGATGTAACAAAGAGTGGGGCGAGAGGAGAGCAGAAGAAAGAGACGGGTCTGTGTTCCCCACTTCGGCGTaGCCCATGGAGATGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCNKEWGERRAEERDGSVFPTSA*PMEMTL Trigger: CAAAGTCATCTCCATGGGCAACGCCGAAGTGGGGAA...CACAGACCCGTCTCTTTCTTCTGCTCTCCTCTCGCCCCACTCTTTGTTACATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTGGTTGAACGAGGCGCAGCCGCGAATAGTGTCTGCTaGTTCTTTGGTGAAACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: KAPCCNCSPAHVVERGAAANSVC*FFGETS Trigger: GCTAGTTTCACCAAAGAACAAGCAGACACTATTCGC...GGCTGCGCCTCGTTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS GCA 90 bp | GGAACCCTTTGCTTTCAGCCCAGAGACGCCCCTCACTTTCATCGATaGAGCGGTGTTTGGAGCAGTCGATCTTGTTGGCACAAACAACAA | + |
|
Preference number: 5 (lower is better) Translates to: GTLCFQPRDAPHFHR*SGVWSSRSCWHKQQ Trigger: TTGTTGTTTGTGCCAACAAGATCGACTGCTCCAAACACCGCTGCATCGATGAAAGTGAGGGGCGTCTCTGGGCTGAAAGCAAAGGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | CCCTCATTCCCAGGGACACAGCATCCTTGCTGCTTGATGCTAGCAACTATTTCTTTCCCCACTTCGGCGTaGCCCATGGAGATGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSFPGTQHPCCLMLATISFPTSA*PMEMTL Trigger: CAAAGTCATCTCCATGGGCAACGCCGAAGTGGGGAA...AGAAATAGTTGCTAGCATCAAGCAGCAAGGATGCTGTGTCCCTGGGAATGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | CAATCCCTCTGTCTTTCTACCACTTGTCCCCGATTCAGTGCTGGCAGGAGCCCCGAGCAGTCGATCTTGTaGGCACAAACAACAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: QSLCLSTTCPRFSAGRSPEQSIL*AQTTKT Trigger: TGTCTTTGTTGTTTGTGCCAACAAGATCGACTGCTC...GGGGCTCCTGCCAGCACTGAATCGGGGACAAGTGGTAGAAAGACAGAGGGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS-3UTR CAA 90 bp | CCTCTAAGAGCTTCTGTTCTGGTGTCGGGCCCCTCATTCCCAGGGACACAGCATGTGTCTGCTTGTTCTTaGGTGAAACTAGCACTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PLRASVLVSGPSFPGTQHVSACS*VKLALL Trigger: TAGCAGTGCTAGTTTCACCAAAGAACAAGCAGACAC...ATGCTGTGTCCCTGGGAATGAGGGGCCCGACACCAGAACAGAAGCTCTTAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS GCA 90 bp | TTCCCTCTCCAGTTTGTGCTGATGTTTCAAAGTACAGGAACCCTTTaGTTTCAGCCCAGAGACGCCCCTCACTTTCATCGATGCAGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: FPLQFVLMFQSTGTL*FQPRDAPHFHRCSG Trigger: ACCGCTGCATCGATGAAAGTGAGGGGCGTCTCTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACATCAGCACAAACTGGAGAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGGCAACAGCACGAGAAAGGCTTCTCTCTATGCAACATGAGTTTTCATACTCCCATGGAGATGACTTaGATGCGGAGGGACTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QGQQHEKGFSLCNMSFHTPMEMT*MRRDLA Trigger: CGCCAAGTCCCTCCGCATCAAAGTCATCTCCATGGG...AGTATGAAAACTCATGTTGCATAGAGAGAAGCCTTTCTCGTGCTGTTGCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | ACCTCTCATCCTCATGACTCCCACTTTCTGTTCCAGGAGCAGCTGGATAATCAGAAGTACAGGAACCCTTaGCTTTCAGCCCAGAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: TSHPHDSHFLFQEQLDNQKYRNP*LSAQRR Trigger: GCGTCTCTGGGCTGAAAGCAAAGGGTTCCTGTACTT...CTGATTATCCAGCTGCTCCTGGAACAGAAAGTGGGAGTCATGAGGATGAGAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | CGGGGGCCAGGCTCTTTCTCTCTCCTGTTGTTATTCCTTTCTCTGATGGTGGGCGTGTCTGCTTGTTCTTaGGTGAAACTAGCACTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RGPGSFSLLLLFLSLMVGVSACS*VKLALL Trigger: TAGCAGTGCTAGTTTCACCAAAGAACAAGCAGACAC...GCCCACCATCAGAGAAAGGAATAACAACAGGAGAGAGAAAGAGCCTGGCCCCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | AGGGACCCAAATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGCGAATAGTGTCTGCTaGTTCTTTGGTGAAACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RDPNGNTKAPCCNCSPAHANSVC*FFGETS Trigger: GCTAGTTTCACCAAAGAACAAGCAGACACTATTCGC...ATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATTTGGGTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | AATGGGAACACTAAAGCCCCCTGCTGTAACTGCTCTCCTGCCCATGTGGTTGAAGTCTGGAACATCTCGTaGATTCCCTCTCCAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NGNTKAPCCNCSPAHVVEVWNIS*IPSPVC Trigger: ACAAACTGGAGAGGGAATCAACGAGATGTTCCAGAC...TTCAACCACATGGGCAGGAGAGCAGTTACAGCAGGGGGCTTTAGTGTTCCCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS CCA 90 bp | TTTCAGCCCAGAGACGCCCCTCACTTTCATCGATGCAGCGGTGTTTaGAGCAGTCGATCTTGTTGGCACAAACAACAAAGACAATGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FQPRDAPHFHRCSGV*SSRSCWHKQQRQCC Trigger: ACAACATTGTCTTTGTTGTTTGTGCCAACAAGATCGACTGCTCCAAACACCGCTGCATCGATGAAAGTGAGGGGCGTCTCTGGGCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | TTGCCAAGTAATTCAATCCAGACTGGCCTCTCTCTTGCAATACTCCTGCCTCATAAGTACAGGAACCCTTaGCTTTCAGCCCAGAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: LPSNSIQTGLSLAILLPHKYRNP*LSAQRR Trigger: GCGTCTCTGGGCTGAAAGCAAAGGGTTCCTGTACTT...ATGAGGCAGGAGTATTGCAAGAGAGAGGCCAGTCTGGATTGAATTACTTGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS-3UTR CAA 90 bp | AGCATTCGTGAAGGAAAACTCCATGTTGGTTATTTCACCTCAAGGGGAGTCTGTAAGTACAGGAACCCTTaGCTTTCAGCCCAGAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: SIREGKLHVGYFTSRGVCKYRNP*LSAQRR Trigger: GCGTCTCTGGGCTGAAAGCAAAGGGTTCCTGTACTT...ACAGACTCCCCTTGAGGTGAAATAACCAACATGGAGTTTTCCTTCACGAATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGAGTCGTCTGGAACATCTCGTaGATTCCCTCTCCAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RWLQLKIRIPEFRGMTGVVWNIS*IPSPVC Trigger: ACAAACTGGAGAGGGAATCAACGAGATGTTCCAGAC...GACTCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGAGCATTCACAACTGCTTaGAAGGCATCTTCACTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HRWLQLKIRIPEFRGMTGAFTTA*KASSLP Trigger: AGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGC...TCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS TCA 90 bp | GTAAAAGGTCTGGAACATCTCGTTGATTCCCTCTCCAGTTTGTGCTaGTGTTTCAAAGTACAGGAACCCTTTGCTTTCAGCCCAGAGACG | + |
|
Preference number: 5 (lower is better) Translates to: VKGLEHLVDSLSSLC*CFKVQEPFAFSPET Trigger: CGTCTCTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACATCAGCACAAACTGGAGAGGGAATCAACGAGATGTTCCAGACCTTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS GCA 90 bp | GCGAATAGTGTCTGCTTGTTCTTTGGTGAAACTAGCACTGCTACTTaGAGTAGGACGCTTCCCGCCATTTTCACACAAGTCAACTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: ANSVCLFFGETSTAT*SRTLPAIFTQVNYG Trigger: TCCATAGTTGACTTGTGTGAAAATGGCGGGAAGCGTCCTACTGCAAGTAGCAGTGCTAGTTTCACCAAAGAACAAGCAGACACTATTCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS GCA 90 bp | CATCTCCCAGCTGTCCTTACTATTTCGGATTCTGCGAATAGTGTCTaGTTGTTCTTTGGTGAAACTAGCACTGCTACTTGCAGTAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: HLPAVLTISDSANSV*LFFGETSTATCSRT Trigger: CGTCCTACTGCAAGTAGCAGTGCTAGTTTCACCAAAGAACAAGCAGACACTATTCGCAGAATCCGAAATAGTAAGGACAGCTGGGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGAGTCGTGTCTGCTTGTTCTTaGGTGAAACTAGCACTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RWLQLKIRIPEFRGMTGVVSACS*VKLALL Trigger: TAGCAGTGCTAGTTTCACCAAAGAACAAGCAGACAC...GACTCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | TTCACTAAGAACAACATTTTAAAGCTCAGAGCAGCTGCGCAGAGCACAGCCATGGAGCAGTCGATCTTGTaGGCACAAACAACAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FTKNNILKLRAAAQSTAMEQSIL*AQTTKT Trigger: TGTCTTTGTTGTTTGTGCCAACAAGATCGACTGCTC...CATGGCTGTGCTCTGCGCAGCTGCTCTGAGCTTTAAAATGTTGTTCTTAGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | TGTAAATTACCTTGTACGAGCATTCACAGTGGAGGGAAAGAATGTGCAGGGAGCGCGAATAGTGTCTGCTaGTTCTTTGGTGAAACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: CKLPCTSIHSGGKECAGSANSVC*FFGETS Trigger: GCTAGTTTCACCAAAGAACAAGCAGACACTATTCGC...GCTCCCTGCACATTCTTTCCCTCCACTGTGAATGCTCGTACAAGGTAATTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS GCA 90 bp | GTCTCTGACTTGGACCTTTGTGACTCCATAGTCAATCCCGATGGTTaGCAGGTATTTAGACACAAATCTCTTCTCACAGTAGCGCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: VSDLDLCDSIVNPDG*QVFRHKSLLTVALY Trigger: ATAAAGCGCTACTGTGAGAAGAGATTTGTGTCTAAATACCTGGCAACCATCGGGATTGACTATGGAGTCACAAAGGTCCAAGTCAGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAACAGCACGAGAAAGGCTTCTCTCTATGCAACATGAGTTTTCATACTTGTGAGCAGTCGATCTTGTaGGCACAAACAACAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GQQHEKGFSLCNMSFHTCEQSIL*AQTTKT Trigger: TGTCTTTGTTGTTTGTGCCAACAAGATCGACTGCTC...ACAAGTATGAAAACTCATGTTGCATAGAGAGAAGCCTTTCTCGTGCTGTTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGAAGTGCATAAGAGATGTGGGGTTATCTCTCACACAAAAGCGGTCATCGCATTCACAACTGCTTaGAAGGCATCTTCACTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RNEVHKRCGVISHTKAVIAFTTA*KASSLP Trigger: AGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGC...GATGACCGCTTTTGTGTGAGAGATAACCCCACATCTCTTATGCACTTCATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020986.15 |
||
| CDS TCA 90 bp | CACACAAGTCAACTATGGACAAGTAAAAGGTCTGGAACATCTCGTTaGTTCCCTCTCCAGTTTGTGCTGATGTTTCAAAGTACAGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: HTSQLWTSKRSGTSR*FPLQFVLMFQSTGT Trigger: GGTTCCTGTACTTTGAAACATCAGCACAAACTGGAGAGGGAATCAACGAGATGTTCCAGACCTTTTACTTGTCCATAGTTGACTTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | CACAGGTGGCTGCAGCTCAAAATAAGAATACCAGAGTTCAGAGGGATGACAGGATCAAAGATGTTAACTTaGATCTCTCTGTCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: HRWLQLKIRIPEFRGMTGSKMLT*ISLSLT Trigger: AGTCAGAGACAGAGAGATCAAAGTTAACATCTTTGA...TCCTGTCATCCCTCTGAACTCTGGTATTCTTATTTTGAGCTGCAGCCACCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | ATCTTAAATGTGCAAGCAGTTTTCAAAATGTCGAAGGACAAAGCACACAGCTGCGTCTGGAACATCTCGTaGATTCCCTCTCCAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ILNVQAVFKMSKDKAHSCVWNIS*IPSPVC Trigger: ACAAACTGGAGAGGGAATCAACGAGATGTTCCAGAC...GCAGCTGTGTGCTTTGTCCTTCGACATTTTGAAAACTGCTTGCACATTTAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAACAGCACGAGAAAGGCTTCTCTCTATGCAACATGAGTTTTCATACTTGTTCAAAGATGTTAACTTaGATCTCTCTGTCTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: GQQHEKGFSLCNMSFHTCSKMLT*ISLSLT Trigger: AGTCAGAGACAGAGAGATCAAAGTTAACATCTTTGA...ACAAGTATGAAAACTCATGTTGCATAGAGAGAAGCCTTTCTCGTGCTGTTGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS GCA 72 bp | TGCTTTCAGCCCAGAGACGCCCCTCACTTTCATCGATaGAGCGGTGTTTGGAGCAGTCGATCTTGTTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CFQPRDAPHFHR*SGVWSSRSCWH Trigger: GTGCCAACAAGATCGACTGCTCCAAACACCGCTGCATCGATGAAAGTGAGGGGCGTCTCTGGGCTGAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS GCA 72 bp | ATTCACAACTGCTTTGAAGGCATCTTCACTGCCTGGTaGTACACACTTGTCCGGGTGAAGCAGCACAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: IHNCFEGIFTAW*YTLVRVKQHSQ Trigger: CTGGCTGTGCTGCTTCACCCGGACAAGTGTGTAGCACCAGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS CAA 90 bp | ATTCCCTCTCCAGTTTGTGCTGATGTTTCAAAGTACAGGAACCCTTaGCTTTCAGCCCAGAGACGCCCCTCACTTTCATCGATGCAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: IPSPVCADVSKYRNP*LSAQRRPSLSSMQR Trigger: CCGCTGCATCGATGAAAGTGAGGGGCGTCTCTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACATCAGCACAAACTGGAGAGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS GCA 72 bp | GATGTTTTTCAGGAGGGCTGTCCGGGCATTCACAACTaGTTTGAAGGCATCTTCACTGCCTGGTGCTACACA | + |
|
Preference number: 6 (lower is better) Translates to: DVFQEGCPGIHN*FEGIFTAWCYT Trigger: TGTGTAGCACCAGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGCCCGGACAGCCCTCCTGAAAAACATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS CAA 72 bp | CAGAGACGCCCCTCACTTTCATCGATGCAGCGGTGTTaGGAGCAGTCGATCTTGTTGGCACAAACAACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QRRPSLSSMQRC*EQSILLAQTTK Trigger: CTTTGTTGTTTGTGCCAACAAGATCGACTGCTCCAAACACCGCTGCATCGATGAAAGTGAGGGGCGTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS CAA 72 bp | TTTTTCAGGAGGGCTGTCCGGGCATTCACAACTGCTTaGAAGGCATCTTCACTGCCTGGTGCTACACACTTG | + |
|
Preference number: 6 (lower is better) Translates to: FFRRAVRAFTTA*KASSLPGATHL Trigger: CAAGTGTGTAGCACCAGGCAGTGAAGATGCCTTCAAAGCAGTTGTGAATGCCCGGACAGCCCTCCTGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS CAA 90 bp | CTTTCAGCCCAGAGACGCCCCTCACTTTCATCGATGCAGCGGTGTTaGGAGCAGTCGATCTTGTTGGCACAAACAACAAAGACAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSAQRRPSLSSMQRC*EQSILLAQTTKTML Trigger: CAACATTGTCTTTGTTGTTTGTGCCAACAAGATCGACTGCTCCAAACACCGCTGCATCGATGAAAGTGAGGGGCGTCTCTGGGCTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS CCA 72 bp | AGAGACGCCCCTCACTTTCATCGATGCAGCGGTGTTTaGAGCAGTCGATCTTGTTGGCACAAACAACAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RDAPHFHRCSGV*SSRSCWHKQQR Trigger: TCTTTGTTGTTTGTGCCAACAAGATCGACTGCTCCAAACACCGCTGCATCGATGAAAGTGAGGGGCGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS CAA 72 bp | CCAGTTTGTGCTGATGTTTCAAAGTACAGGAACCCTTaGCTTTCAGCCCAGAGACGCCCCTCACTTTCATCG | + |
|
Preference number: 6 (lower is better) Translates to: PVCADVSKYRNP*LSAQRRPSLSS Trigger: CGATGAAAGTGAGGGGCGTCTCTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACATCAGCACAAACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS GCA 72 bp | CAGTTTGTGCTGATGTTTCAAAGTACAGGAACCCTTTaGTTTCAGCCCAGAGACGCCCCTCACTTTCATCGA | + |
|
Preference number: 6 (lower is better) Translates to: QFVLMFQSTGTL*FQPRDAPHFHR Trigger: TCGATGAAAGTGAGGGGCGTCTCTGGGCTGAAAGCAAAGGGTTCCTGTACTTTGAAACATCAGCACAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS CAA 90 bp | CTGTCCTTACTATTTCGGATTCTGCGAATAGTGTCTGCTTGTTCTTaGGTGAAACTAGCACTGCTACTTGCAGTAGGACGCTTCCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLLFRILRIVSACS*VKLALLLAVGRFPP Trigger: TGGCGGGAAGCGTCCTACTGCAAGTAGCAGTGCTAGTTTCACCAAAGAACAAGCAGACACTATTCGCAGAATCCGAAATAGTAAGGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS CAA 90 bp | CTCCCAGCTGTCCTTACTATTTCGGATTCTGCGAATAGTGTCTGCTaGTTCTTTGGTGAAACTAGCACTGCTACTTGCAGTAGGACGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPAVLTISDSANSVC*FFGETSTATCSRTL Trigger: AAGCGTCCTACTGCAAGTAGCAGTGCTAGTTTCACCAAAGAACAAGCAGACACTATTCGCAGAATCCGAAATAGTAAGGACAGCTGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
||
| CDS TCA 72 bp | CTGGAACATCTCGTTGATTCCCTCTCCAGTTTGTGCTaGTGTTTCAAAGTACAGGAACCCTTTGCTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LEHLVDSLSSLC*CFKVQEPFAFS Trigger: GCTGAAAGCAAAGGGTTCCTGTACTTTGAAACATCAGCACAAACTGGAGAGGGAATCAACGAGATGTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| CDS CAA 72 bp | CTTTCATCGATGCAGCGGTGTTTGGAGCAGTCGATCTaGTTGGCACAAACAACAAAGACAATGTTGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: LSSMQRCLEQSI*LAQTTKTMLSM Trigger: CATGGACAACATTGTCTTTGTTGTTTGTGCCAACAAGATCGACTGCTCCAAACACCGCTGCATCGATGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| CDS CAA 72 bp | CTATTTCGGATTCTGCGAATAGTGTCTGCTTGTTCTTaGGTGAAACTAGCACTGCTACTTGCAGTAGGACGC | + |
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Preference number: 6 (lower is better) Translates to: LFRILRIVSACS*VKLALLLAVGR Trigger: GCGTCCTACTGCAAGTAGCAGTGCTAGTTTCACCAAAGAACAAGCAGACACTATTCGCAGAATCCGAAATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| CDS GCA 72 bp | GCTGTCCTTACTATTTCGGATTCTGCGAATAGTGTCTaGTTGTTCTTTGGTGAAACTAGCACTGCTACTTGC | + |
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Preference number: 6 (lower is better) Translates to: AVLTISDSANSV*LFFGETSTATC Trigger: GCAAGTAGCAGTGCTAGTTTCACCAAAGAACAAGCAGACACTATTCGCAGAATCCGAAATAGTAAGGACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| CDS GCA 72 bp | TTGGACCTTTGTGACTCCATAGTCAATCCCGATGGTTaGCAGGTATTTAGACACAAATCTCTTCTCACAGTA | + |
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Preference number: 6 (lower is better) Translates to: LDLCDSIVNPDG*QVFRHKSLLTV Trigger: TACTGTGAGAAGAGATTTGTGTCTAAATACCTGGCAACCATCGGGATTGACTATGGAGTCACAAAGGTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| CDS CAA 72 bp | GTCCTTACTATTTCGGATTCTGCGAATAGTGTCTGCTaGTTCTTTGGTGAAACTAGCACTGCTACTTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: VLTISDSANSVC*FFGETSTATCS Trigger: ACTGCAAGTAGCAGTGCTAGTTTCACCAAAGAACAAGCAGACACTATTCGCAGAATCCGAAATAGTAAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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| CDS TCA 72 bp | CAACTATGGACAAGTAAAAGGTCTGGAACATCTCGTTaGTTCCCTCTCCAGTTTGTGCTGATGTTTCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: QLWTSKRSGTSR*FPLQFVLMFQS Trigger: ACTTTGAAACATCAGCACAAACTGGAGAGGGAATCAACGAGATGTTCCAGACCTTTTACTTGTCCATAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020986.15 ENSMUST00000049584.6 ENSMUST00000219923.2 |
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