Pregenerated sensors for DNAJC25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070972Ensembl transcript IDs: ENSMUST00000095070.4, ENSMUST00000150309.9, ENSMUST00000153467.3
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCAATGAACAGCCATGCTCAGACAGCCCCACCCCCTCCTCCCTaGACTAACAGGGCTGTAAGGGCCTCAAGTCTTCTTGGGTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: AAMNSHAQTAPPPPP*TNRAVRASSLLGCL Trigger: GAGACACCCAAGAAGACTTGAGGCCCTTACAGCCCTGTTAGTGCAGGGAGGAGGGGGTGGGGCTGTCTGAGCATGGCTGTTCATTGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR TCA 90 bp | TACAATACCAGGCTATATAAGAGCACAGGTGAACAGGGGCGAGGATaGCCTGAAACAAGAGGAGGTCCCGAACTTGGGGTTTCTGGTAGC | + |
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Preference number: 1 (lower is better) Translates to: YNTRLYKSTGEQGRG*PETRGGPELGVSGS Trigger: GCTACCAGAAACCCCAAGTTCGGGACCTCCTCTTGTTTCAGGTCATCCTCGCCCCTGTTCACCTGTGCTCTTATATAGCCTGGTATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR CCA 90 bp | AATGGCACACACACTGACCAAAATCACCACCCTAACGTCCACTTTTaGGGCCAGGCGCCTGCTGTAGTAGTGGTAGTAATGGCTATAGTA | + |
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Preference number: 1 (lower is better) Translates to: NGTHTDQNHHPNVHF*GQAPAVVVVVMAIV Trigger: TACTATAGCCATTACTACCACTACTACAGCAGGCGCCTGGCCCCAAAAGTGGACGTTAGGGTGGTGATTTTGGTCAGTGTGTGTGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR TCA 90 bp | GACCAGAAGACAGGCTTGATTGTCATTTTCAGGTGCTCTCCACCTTaGTTTCTAAGACAGGTTCAGTATGAGCAGGCCACCATTGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: DQKTGLIVIFRCSPP*FLRQVQYEQATIAW Trigger: CCAGGCAATGGTGGCCTGCTCATACTGAACCTGTCTTAGAAATCAAGGTGGAGAGCACCTGAAAATGACAATCAAGCCTGTCTTCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR TCA 90 bp | GTAGGAAGCCCCAGCCAGCAGTACCATTCCCTAGCAAGGAAATGCTaGACAACACGAGAGGCAAAGATACATATATTCTTTCCTTACTCT | + |
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Preference number: 1 (lower is better) Translates to: VGSPSQQYHSLARKC*TTREAKIHIFFPYS Trigger: AGAGTAAGGAAAGAATATATGTATCTTTGCCTCTCGTGTTGTTCAGCATTTCCTTGCTAGGGAATGGTACTGCTGGCTGGGGCTTCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR CCA 90 bp | CAGGCGCCTGCTGTAGTAGTGGTAGTAATGGCTATAGTATTCTTCTaGGTGATCCAGCATGTAGTCATAATCCTTCCGTGTTTCTTCATC | + |
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Preference number: 1 (lower is better) Translates to: QAPAVVVVVMAIVFF*VIQHVVIILPCFFI Trigger: GATGAAGAAACACGGAAGGATTATGACTACATGCTGGATCACCCAGAAGAATACTATAGCCATTACTACCACTACTACAGCAGGCGCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR CCA 90 bp | TGCAACTGTAAGCCACAGAAGTCCTTCCCTCTACCTACTGCTTCCTaGCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCAGA | + |
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Preference number: 1 (lower is better) Translates to: CNCKPQKSFPLPTAS*HGVCQSTRKIQTIR Trigger: TCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGCCAGGAAGCAGTAGGTAGAGGGAAGGACTTCTGTGGCTTACAGTTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR TCA 90 bp | GCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAGGTTTaGCTCAGCCATTCTGCCATTTCCGTTCACTTCCATAAGTATAAA | + |
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Preference number: 1 (lower is better) Translates to: ALYMSVYGTLVEYQV*LSHSAISVHFHKYK Trigger: TTTATACTTATGGAAGTGAACGGAAATGGCAGAATGGCTGAGTCAAACCTGATACTCTACCAAAGTACCATATACACTCATATACAGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR CCA 90 bp | CTTCATCCTTTCAATAAGGTAGTACTTTTTCTTTCAGCAATATTGTaGATCTTAAGGTCCCAGGGTCAGGAGATTCCAACTTCTTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: LHPFNKVVLFLSAIL*ILRSQGQEIPTSFQ Trigger: TTGGAAAGAAGTTGGAATCTCCTGACCCTGGGACCTTAAGATCCACAATATTGCTGAAAGAAAAAGTACTACCTTATTGAAAGGATGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153467.3 |
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| 3UTR TCA 90 bp | GAATGGTTCTCCTGGAGAAACTGTGTCCAGAAAGACACAATAATCTaGTCAAGTGCTGTTGTCATTATTCTGTTGTTGTTTTGTAAAACT | + |
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Preference number: 1 (lower is better) Translates to: EWFSWRNCVQKDTII*SSAVVIILLLFCKT Trigger: AGTTTTACAAAACAACAACAGAATAATGACAACAGCACTTGATCAGATTATTGTGTCTTTCTGGACACAGTTTCTCCAGGAGAACCATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR CCA 90 bp | CACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCGCTTCCTAACGTCCACTTTTaGGGCCAGGCGCCTGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: HKGQPSRPFILHPPAVALPNVHF*GQAPAV Trigger: TACAGCAGGCGCCTGGCCCCAAAAGTGGACGTTAGG...AAGCGCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR CCA 90 bp | CGTCCACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCGCAGTCCCTGCTCCTTaGCGATTTCTGTTGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: RPQRSAVQALHSSSTCGSAVPAP*RFLLPG Trigger: TCCAGGCAACAGAAATCGCCAAGGAGCAGGGACTGC...GCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTGGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR GCA 90 bp | CGTCCACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCTTTCTGTTGCCTGGATaGGGTACTTGGGCACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RPQRSAVQALHSSSTCGSFLLPG*GTWALW Trigger: CCACAGTGCCCAAGTACCGCATCCAGGCAACAGAAA...GCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTGGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCACAGCAGCACCTCAGCTTCTTCAGTCGTCCACAAAGGTCAGCCGTCCATTTCTGTTGCCTGGATaGGGTACTTGGGCACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: CGTAAPQLLQSSTKVSRPFLLPG*GTWALW Trigger: CCACAGTGCCCAAGTACCGCATCCAGGCAACAGAAA...TGGACGGCTGACCTTTGTGGACGACTGAAGAAGCTGAGGTGCTGCTGTGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR CCA 90 bp | AGCACCTCAGCTTCTTCAGTCGTCCACAAAGGTCAGCCGTCCAGGCCCTTCATTGCGATTTCTGTTGCCTaGATGCGGTACTTGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: STSASSVVHKGQPSRPFIAISVA*MRYLGT Trigger: AGTGCCCAAGTACCGCATCCAGGCAACAGAAATCGC...AATGAAGGGCCTGGACGGCTGACCTTTGTGGACGACTGAAGAAGCTGAGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR TCA 90 bp | ACACGAATCGATGAAAAACAGGCAGCAATGAACAGCCATGCTCAGACAGCCCCAACCCAGTCCCTGGGCTaGAATAAATCCTTCAGCCGG | + |
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Preference number: 2 (lower is better) Translates to: TRIDEKQAAMNSHAQTAPTQSLG*NKSFSR Trigger: CCGGCTGAAGGATTTATTTCAGCCCAGGGACTGGGT...TGGGGCTGTCTGAGCATGGCTGTTCATTGCTGCCTGTTTTTCATCGATTCGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGCTTCTTCAGTCGTCCACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCTCCAGGCTGTCAAACTaGGACTGGGACATCTTCATA | + |
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Preference number: 2 (lower is better) Translates to: PQLLQSSTKVSRPGPSFFSRLSN*DWDIFI Trigger: TATGAAGATGTCCCAGTCTCAGTTTGACAGCCTGGA...GAAGAATGAAGGGCCTGGACGGCTGACCTTTGTGGACGACTGAAGAAGCTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGGCACAGCAGCACCTCAGCTTCTTCAGTCGTCCACAAAGGTCAGCCGTCCACACCAGCTGAAATACTaGAACATTGAAATGGCACAC | + |
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Preference number: 2 (lower is better) Translates to: CGTAAPQLLQSSTKVSRPHQLKY*NIEMAH Trigger: GTGTGCCATTTCAATGTTTCAGTATTTCAGCTGGTG...TGGACGGCTGACCTTTGTGGACGACTGAAGAAGCTGAGGTGCTGCTGTGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGGCACAGCAGCACCTCAGCTTCTTCAGTCGTCCACAAAGGTCAGCCGTCCACTGTGGCTAGGTAGCTaGTTGCTTTATTGTAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: CGTAAPQLLQSSTKVSRPLWLGS*LLYCSY Trigger: ATAGCTACAATAAAGCAATCAGCTACCTAGCCACAG...TGGACGGCTGACCTTTGTGGACGACTGAAGAAGCTGAGGTGCTGCTGTGCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR CCA 90 bp | CACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCGCTTGCTATAGTATTCTTCTaGGTGATCCAGCATGTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: HKGQPSRPFILHPPAVALAIVFF*VIQHVV Trigger: GACTACATGCTGGATCACCCAGAAGAATACTATAGC...AAGCGCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGGCACAGCAGCACCTCAGCTTCTTCAGTCGTCCACAAAGGTCAGCCGTCCAGAAATACTGAAACATTaGAATGGCACACACACTGAC | + |
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Preference number: 2 (lower is better) Translates to: CGTAAPQLLQSSTKVSRPEILKH*NGTHTD Trigger: GTCAGTGTGTGTGCCATTTCAATGTTTCAGTATTTC...TGGACGGCTGACCTTTGTGGACGACTGAAGAAGCTGAGGTGCTGCTGTGCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR CCA 90 bp | GAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACTCTCCTGGACCTAACGTCCACTTTTaGGGCCAGGCGCCTGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: ETVIENIPQGHDVTHSPGPNVHF*GQAPAV Trigger: TACAGCAGGCGCCTGGCCCCAAAAGTGGACGTTAGG...TCCAGGAGAGTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR TCA 90 bp | CACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCGCTTATAAGCAAACACTCTTaGAGAAGAAACACTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: HKGQPSRPFILHPPAVALISKHS*RRNTSH Trigger: GTGTGAAGTGTTTCTTCTTCAAGAGTGTTTGCTTAT...AAGCGCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR TCA 90 bp | ATGGTATGTGCGTGGGGAGGGCTGCAAAGTCAGTCCCCACTGTTTGCAAGGAAGACAGAGCACTGTATATaGGTGTATATGGTACTTTGG | + |
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Preference number: 2 (lower is better) Translates to: MVCAWGGLQSQSPLFARKTEHCI*VYMVLW Trigger: CCAAAGTACCATATACACTCATATACAGTGCTCTGT...CTTCCTTGCAAACAGTGGGGACTGACTTTGCAGCCCTCCCCACGCACATACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR GCA 90 bp | ACACGAATCGATGAAAAACAGGCAGCAATGAACAGCCATGCTCAGACAGCCCCATCACTGGGCAGGAAGTaGAGAGGTTCTAGAATACTC | + |
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Preference number: 2 (lower is better) Translates to: TRIDEKQAAMNSHAQTAPSLGRK*RGSRIL Trigger: GAGTATTCTAGAACCTCTGCACTTCCTGCCCAGTGA...TGGGGCTGTCTGAGCATGGCTGTTCATTGCTGCCTGTTTTTCATCGATTCGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAGAGTTTCTGATCTTATCAAGAGTAGAATCACTGGGCAGGAAGTGCAGACTTGGCGATTTCTGTTaGCTGGATGCGGTACTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PGEFLILSRVESLGRKCRLGDFC*LDAVLG Trigger: CCCAAGTACCGCATCCAGGCAACAGAAATCGCCAAG...TCTGCACTTCCTGCCCAGTGATTCTACTCTTGATAAGATCAGAAACTCTCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR GCA 90 bp | ACACGAATCGATGAAAAACAGGCAGCAATGAACAGCCATGCTCAGACAGCCCCATTGACTCAGCCATTCTaGCATTTCCGTTCACTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TRIDEKQAAMNSHAQTAPLTQPF*HFRSLP Trigger: TGGAAGTGAACGGAAATGGCAGAATGGCTGAGTCAA...TGGGGCTGTCTGAGCATGGCTGTTCATTGCTGCCTGTTTTTCATCGATTCGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR GCA 90 bp | AAGACAGACAAAAGAATATCCAAAGATAGTCTGAGTCTTCACTGGCTGAACATCGTGCGTGGGGAGGGCTaGAAAGTCAGTCCCCACTGT | + |
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Preference number: 2 (lower is better) Translates to: KTDKRISKDSLSLHWLNIVRGEG*KVSPHC Trigger: ACAGTGGGGACTGACTTTGCAGCCCTCCCCACGCAC...GATGTTCAGCCAGTGAAGACTCAGACTATCTTTGGATATTCTTTTGTCTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR CCA 90 bp | AGCACCTCAGCTTCTTCAGTCGTCCACAAAGGTCAGCCGTCCAGGCCCTTCATTCAATATGTTACTGAATaGTTCTCCTGGAGAAACTGT | + |
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Preference number: 2 (lower is better) Translates to: STSASSVVHKGQPSRPFIQYVTE*FSWRNC Trigger: ACAGTTTCTCCAGGAGAACCATTCAGTAACATATTG...AATGAAGGGCCTGGACGGCTGACCTTTGTGGACGACTGAAGAAGCTGAGGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR CCA 90 bp | ACACGAATCGATGAAAAACAGGCAGCAATGAACAGCCATGCTCAGACAGCCCCAATATTTTACATGAGATaGTATGTGCGTGGGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: TRIDEKQAAMNSHAQTAPIFYMR*YVRGEG Trigger: GCCCTCCCCACGCACATACCATCTCATGTAAAATAT...TGGGGCTGTCTGAGCATGGCTGTTCATTGCTGCCTGTTTTTCATCGATTCGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGATACACAAGTGTGTGGGTGTATGTGGGGACCAGAAGACAGGCTTGATTTGTAACCCACTCTCCTaGAGAGTTTCTGATCTTATC | + |
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Preference number: 2 (lower is better) Translates to: VQIHKCVGVCGDQKTGLICNPLS*RVSDLI Trigger: GATAAGATCAGAAACTCTCCAGGAGAGTGGGTTACA...AATCAAGCCTGTCTTCTGGTCCCCACATACACCCACACACTTGTGTATCTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR TCA 90 bp | TCCTATAATGAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACGAACAGGGGCGAGGATaGCCTGAAACAAGAGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: SYNETVIENIPQGHDVTHEQGRG*PETRGG Trigger: ACCTCCTCTTGTTTCAGGTCATCCTCGCCCCTGTTC...GTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTCATTATAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR GCA 90 bp | GAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACTCTCCTGGATCACTGGGCAGGAAGTaGAGAGGTTCTAGAATACTC | + |
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Preference number: 2 (lower is better) Translates to: ETVIENIPQGHDVTHSPGSLGRK*RGSRIL Trigger: GAGTATTCTAGAACCTCTGCACTTCCTGCCCAGTGA...TCCAGGAGAGTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTATAATGAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACGCAGTCCCTGCTCCTTaGCGATTTCTGTTGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SYNETVIENIPQGHDVTHAVPAP*RFLLPG Trigger: TCCAGGCAACAGAAATCGCCAAGGAGCAGGGACTGC...GTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTCATTATAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR CAA 90 bp | GCCACAGAAGTCCTTCCCTCTACCTACTGCTTCCTGGCATGGTGTTaGTCAGAGTACCAGAAAAATACAAACAATCAGAGATGTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: ATEVLPSTYCFLAWC*SEYQKNTNNQRCLE Trigger: TTCCAAACATCTCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGCCAGGAAGCAGTAGGTAGAGGGAAGGACTTCTGTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR TCA 90 bp | CCTACTGCTTCCTGGCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCCTGGCATATTTTACATaGGATGGTATGTGCGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PTASWHGVCQSTRKIQTILAYFT*DGMCVG Trigger: CCCCACGCACATACCATCTCATGTAAAATATGCCAG...GATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGCCAGGAAGCAGTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR TCA 90 bp | CCTACTGCTTCCTGGCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCAGGTGCTCTCCACCTTaGTTTCTAAGACAGGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PTASWHGVCQSTRKIQTIRCSPP*FLRQVQ Trigger: CTGAACCTGTCTTAGAAATCAAGGTGGAGAGCACCT...GATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGCCAGGAAGCAGTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR GCA 90 bp | AGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAGGTTTGACTCAGTTGGGGCCAGGCGCCTaGTGTAGTAGTGGTAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: STVYECIWYFGRVSGLTQLGPGA*CSSGSN Trigger: ATTACTACCACTACTACAGCAGGCGCCTGGCCCCAA...CTGAGTCAAACCTGATACTCTACCAAAGTACCATATACACTCATATACAGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR CCA 90 bp | TCCTATAATGAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACGCGATTTCTGTTGCCTaGATGCGGTACTTGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: SYNETVIENIPQGHDVTHAISVA*MRYLGT Trigger: AGTGCCCAAGTACCGCATCCAGGCAACAGAAATCGC...GTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTCATTATAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR TCA 90 bp | GATCTTGAACAGAGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAGGAGGCAGAGGCAGATaGATTTCTGAGTTCGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: DLEQSTVYECIWYFGRVSGGRGR*ISEFEA Trigger: GGCTTCGAACTCAGAAATTCATCTGCCTCTGCCTCC...TGATACTCTACCAAAGTACCATATACACTCATATACAGTGCTCTGTTCAAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR TCA 90 bp | GAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACTCTCCTGGACTGTGGCTAGGTAGCTaGTTGCTTTATTGTAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: ETVIENIPQGHDVTHSPGLWLGS*LLYCSY Trigger: ATAGCTACAATAAAGCAATCAGCTACCTAGCCACAG...TCCAGGAGAGTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR TCA 90 bp | CAAACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGATCCAGGCTGTCAAACTaGGACTGGGACATCTTCATA | + |
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Preference number: 2 (lower is better) Translates to: QTCKDYSKDNMLLNGSPGSRLSN*DWDIFI Trigger: TATGAAGATGTCCCAGTCTCAGTTTGACAGCCTGGA...TCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR GCA 90 bp | CAAACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGATCACTGGGCAGGAAGTaGAGAGGTTCTAGAATACTC | + |
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Preference number: 2 (lower is better) Translates to: QTCKDYSKDNMLLNGSPGSLGRK*RGSRIL Trigger: GAGTATTCTAGAACCTCTGCACTTCCTGCCCAGTGA...TCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| 3UTR-3UTR TCA 90 bp | GATCTTGAACAGAGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAGCACGTAATCTAGACTaGGCTCTGTGTGCTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: DLEQSTVYECIWYFGRVSARNLD*ALCACV Trigger: CACACAAGCACACAGAGCTCAGTCTAGATTACGTGC...TGATACTCTACCAAAGTACCATATACACTCATATACAGTGCTCTGTTCAAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCCATTTCCGTTCACTTCCATAAGTATAAAGACACACTTATTCCCTAGAGGAAGAAACATTTCTTTCTaGTGGTCCTCCAGGCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LPFPFTSISIKTHLFPRGRNISF*WSSRLS Trigger: TGACAGCCTGGAGGACCATCAGAAAGAAATGTTTCT...TCCTCTAGGGAATAAGTGTGTCTTTATACTTATGGAAGTGAACGGAAATGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR TCA 90 bp | CACATAAGACCCTCATGTGCATTACAGTTTAATCACACAAGTAATGCAGGGAGGAGGACAATATGTTACTaGATGGTTCTCCTGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: HIRPSCALQFNHTSNAGRRTICY*MVLLEK Trigger: TTTCTCCAGGAGAACCATTCAGTAACATATTGTCCT...CCTCCCTGCATTACTTGTGTGATTAAACTGTAATGCACATGAGGGTCTTATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAGGTTTGACTCAGCTTCATCCTGGGAAGTaGAGAAGATGTGACGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: STVYECIWYFGRVSGLTQLHPGK*RRCDVT Trigger: TGTAACGTCACATCTTCTTCACTTCCCAGGATGAAG...CTGAGTCAAACCTGATACTCTACCAAAGTACCATATACACTCATATACAGTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150309.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGCCATTTCCGTTCACTTCCATAAGTATAAAGACACACTTATTCCCTAGAGGACACCAGCTGAAATACTaGAACATTGAAATGGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: LPFPFTSISIKTHLFPRGHQLKY*NIEMAH Trigger: GTGTGCCATTTCAATGTTTCAGTATTTCAGCTGGTG...TCCTCTAGGGAATAAGTGTGTCTTTATACTTATGGAAGTGAACGGAAATGGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR GCA 90 bp | GCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCAGAGATGTTTGGAAAGACTGAGCTCTGTGTaGTTGTGTGTGTGTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: AWCLSEYQKNTNNQRCLERLSSV*LCVCVC Trigger: ACACACACACACACACAAGCACACAGAGCTCAGTCT...TTCCAAACATCTCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCATTTCCGTTCACTTCCATAAGTATAAAGACACACTTATTCCCTAGAGGAACTGAATGGTTCTCCTaGAGAAACTGTGTCCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LPFPFTSISIKTHLFPRGTEWFS*RNCVQK Trigger: TTTCTGGACACAGTTTCTCCAGGAGAACCATTCAGT...TCCTCTAGGGAATAAGTGTGTCTTTATACTTATGGAAGTGAACGGAAATGGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CCA 90 bp | ACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGAGAAGCTATAGTATTCTTCTaGGTGATCCAGCATGTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TCKDYSKDNMLLNGSPGEAIVFF*VIQHVV Trigger: GACTACATGCTGGATCACCCAGAAGAATACTATAGC...TTCTCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR TCA 90 bp | CACATAAGACCCTCATGTGCATTACAGTTTAATCACACAAGTAATGCAGGGAGGATAAGCAAACACTCTTaGAGAAGAAACACTTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: HIRPSCALQFNHTSNAGRISKHS*RRNTSH Trigger: GTGTGAAGTGTTTCTTCTTCAAGAGTGTTTGCTTAT...CCTCCCTGCATTACTTGTGTGATTAAACTGTAATGCACATGAGGGTCTTATGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCTATAATGAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACTGTAACCCACTCTCCTaGAGAGTTTCTGATCTTATC | + |
|
Preference number: 2 (lower is better) Translates to: SYNETVIENIPQGHDVTHCNPLS*RVSDLI Trigger: GATAAGATCAGAAACTCTCCAGGAGAGTGGGTTACA...GTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTCATTATAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CCA 90 bp | CAAACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGAAGGGAAGCAGCAAGTTaGTGGTATAAAAGACCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: QTCKDYSKDNMLLNGSPGREAAS*WYKRPF Trigger: AAAAGGTCTTTTATACCACCAACTTGCTGCTTCCCT...TCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCTATAATGAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACAGGACAATATGTTACTaGATGGTTCTCCTGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SYNETVIENIPQGHDVTHRTICY*MVLLEK Trigger: TTTCTCCAGGAGAACCATTCAGTAACATATTGTCCT...GTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTCATTATAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CCA 90 bp | GATCTTGAACAGAGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAACTGAATGGTTCTCCTaGAGAAACTGTGTCCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: DLEQSTVYECIWYFGRVSTEWFS*RNCVQK Trigger: TTTCTGGACACAGTTTCTCCAGGAGAACCATTCAGT...TGATACTCTACCAAAGTACCATATACACTCATATACAGTGCTCTGTTCAAGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCATTTCCGTTCACTTCCATAAGTATAAAGACACACTTATTCCCTAGAGGACAATATGTTACTGAATaGTTCTCCTGGAGAAACTGT | + |
|
Preference number: 2 (lower is better) Translates to: LPFPFTSISIKTHLFPRGQYVTE*FSWRNC Trigger: ACAGTTTCTCCAGGAGAACCATTCAGTAACATATTG...TCCTCTAGGGAATAAGTGTGTCTTTATACTTATGGAAGTGAACGGAAATGGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAGGTTTGACTCAGAGGGAAGCAGCAAGTTaGTGGTATAAAAGACCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: STVYECIWYFGRVSGLTQREAAS*WYKRPF Trigger: AAAAGGTCTTTTATACCACCAACTTGCTGCTTCCCT...CTGAGTCAAACCTGATACTCTACCAAAGTACCATATACACTCATATACAGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCATTTCCGTTCACTTCCATAAGTATAAAGACACACTTATTCCCTAGAGGAAGATGTGACGTTACATaGTATTTCATTAAGAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: LPFPFTSISIKTHLFPRGRCDVT*YFIKSL Trigger: GAGGCTCTTAATGAAATACCATGTAACGTCACATCT...TCCTCTAGGGAATAAGTGTGTCTTTATACTTATGGAAGTGAACGGAAATGGCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150309.9 |
||
| 3UTR CAA 90 bp | TTTCTTCATCCTTTCAATAAGGTAGTACTTTTTCTTTCAGCAATATaGTGGATCTTAAGGTCCCAGGGTCAGGAGATTCCAACTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: FLHPFNKVVLFLSAI*WILRSQGQEIPTSF Trigger: GAAAGAAGTTGGAATCTCCTGACCCTGGGACCTTAAGATCCACAATATTGCTGAAAGAAAAAGTACTACCTTATTGAAAGGATGAAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153467.3 |
||
| 3UTR-3UTR TCA 90 bp | GATCTTGAACAGAGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAGAAATACTGAAACATTaGAATGGCACACACACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: DLEQSTVYECIWYFGRVSEILKH*NGTHTD Trigger: GTCAGTGTGTGTGCCATTTCAATGTTTCAGTATTTC...TGATACTCTACCAAAGTACCATATACACTCATATACAGTGCTCTGTTCAAGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTGTTGTCATTATTCTGTTGTTGTTTTGTAAAACTGGAGACCAGGAAAGGACAATATGTTACTGAATaGTTCTCCTGGAGAAACTGT | + |
|
Preference number: 2 (lower is better) Translates to: VLLSLFCCCFVKLETRKGQYVTE*FSWRNC Trigger: ACAGTTTCTCCAGGAGAACCATTCAGTAACATATTG...TCCTTTCCTGGTCTCCAGTTTTACAAAACAACAACAGAATAATGACAACAGCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR TCA 90 bp | GCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCAGAGATGTTTGGAAATAAGCAAACACTCTTaGAGAAGAAACACTTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: AWCLSEYQKNTNNQRCLEISKHS*RRNTSH Trigger: GTGTGAAGTGTTTCTTCTTCAAGAGTGTTTGCTTAT...TTCCAAACATCTCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCTTACTCTTGTGGGTATGATATTACGAGGTGTTTGAGCTTTAGCCTTTCAACAATCAGAGATGTTTaGAAAATGGTGAGATACACT | + |
|
Preference number: 2 (lower is better) Translates to: FPYSCGYDITRCLSFSLSTIRDV*KMVRYT Trigger: AGTGTATCTCACCATTTTCCAAACATCTCTGATTGT...TGAAAGGCTAAAGCTCAAACACCTCGTAATATCATACCCACAAGAGTAAGGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR GCA 72 bp | AGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTaGGGTAGCGCTTCCACCGAGGGTCATTTGCCAATT | + |
|
Preference number: 3 (lower is better) Translates to: RSAVQALHSSST*GSASTEGHLPI Trigger: AATTGGCAAATGACCCTCGGTGGAAGCGCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR TCA 72 bp | AAGCACTTTATCAACCAAGCTACCCAGTCCCTGGGCTaGAATAAATCCTTCAGCCGGGCGTGGTGGCGCACG | + |
|
Preference number: 3 (lower is better) Translates to: KHFINQATQSLG*NKSFSRAWWRT Trigger: CGTGCGCCACCACGCCCGGCTGAAGGATTTATTTCAGCCCAGGGACTGGGTAGCTTGGTTGATAAAGTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR TCA 72 bp | GGCCTGTGGGTATGTCTGAGGGATCGCCTTGATAATTaGTGTAGGAAGCCCCAGCCAGCAGTACCATTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GLWVCLRDRLDN*CRKPQPAVPFP Trigger: AGGGAATGGTACTGCTGGCTGGGGCTTCCTACATCAATTATCAAGGCGATCCCTCAGACATACCCACAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR GCA 72 bp | TGCGTGGGGAGGGCTGCAAAGTCAGTCCCCACTGTTTaGAAGGAAGCACTTTATCAACCAAGCTACCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CVGRAAKSVPTV*KEALYQPSYPV Trigger: GACTGGGTAGCTTGGTTGATAAAGTGCTTCCTTGCAAACAGTGGGGACTGACTTTGCAGCCCTCCCCACGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR TCA 72 bp | AGGCTATATAAGAGCACAGGTGAACAGGGGCGAGGATaGCCTGAAACAAGAGGAGGTCCCGAACTTGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: RLYKSTGEQGRG*PETRGGPELGV Trigger: AACCCCAAGTTCGGGACCTCCTCTTGTTTCAGGTCATCCTCGCCCCTGTTCACCTGTGCTCTTATATAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR CCA 72 bp | CACACTGACCAAAATCACCACCCTAACGTCCACTTTTaGGGCCAGGCGCCTGCTGTAGTAGTGGTAGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: HTDQNHHPNVHF*GQAPAVVVVVM Trigger: CATTACTACCACTACTACAGCAGGCGCCTGGCCCCAAAAGTGGACGTTAGGGTGGTGATTTTGGTCAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR CCA 72 bp | AGTAACTGCTATGCAAGTGTCGTCACAATTAGAGTGTaGCACAGCAGCACCTCAGCTTCTTCAGTCGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SNCYASVVTIRV*HSSTSASSVVH Trigger: GTGGACGACTGAAGAAGCTGAGGTGCTGCTGTGCCACACTCTAATTGTGACGACACTTGCATAGCAGTTACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCGCTTTCTGATCAAGTGCTGTaGTCATTATTCTGTTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HKGQPSRPFILHPPAVALSDQVL*SLFCCC Trigger: ACAACAACAGAATAATGACAACAGCACTTGATCAGA...AAGCGCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCGCTTCCTCTGCAGAAATGTTaGAGAAAAGTTAGTCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: HKGQPSRPFILHPPAVALPLQKC*RKVSPI Trigger: TATAGGACTAACTTTTCTCAAACATTTCTGCAGAGG...AAGCGCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR TCA 72 bp | ACAGGCTTGATTGTCATTTTCAGGTGCTCTCCACCTTaGTTTCTAAGACAGGTTCAGTATGAGCAGGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: TGLIVIFRCSPP*FLRQVQYEQAT Trigger: GGTGGCCTGCTCATACTGAACCTGTCTTAGAAATCAAGGTGGAGAGCACCTGAAAATGACAATCAAGCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR CCA 72 bp | AAGCCACAGAAGTCCTTCCCTCTACCTACTGCTTCCTaGCATGGTGTTTGTCAGAGTACCAGAAAAATACAA | + |
|
Preference number: 3 (lower is better) Translates to: KPQKSFPLPTAS*HGVCQSTRKIQ Trigger: TTGTATTTTTCTGGTACTCTGACAAACACCATGCCAGGAAGCAGTAGGTAGAGGGAAGGACTTCTGTGGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR-3UTR CAA 90 bp | CACATAAGACCCTCATGTGCATTACAGTTTAATCACACAAGTAATGCAGGGAGGGACAGCAGCATAGCATaGCCTGTCTTCTTTCTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HIRPSCALQFNHTSNAGRDSSIA*PVFFLV Trigger: CACTAGAAAGAAGACAGGCAATGCTATGCTGCTGTC...CCTCCCTGCATTACTTGTGTGATTAAACTGTAATGCACATGAGGGTCTTATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTACTGCTTCCTGGCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCGACCAGAAGACAGGCTaGATTGTCATTTTCAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PTASWHGVCQSTRKIQTIDQKTG*IVIFRC Trigger: GCACCTGAAAATGACAATCAAGCCTGTCTTCTGGTC...GATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGCCAGGAAGCAGTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGAGAGTTTCTGATCTTATCAAGAGTAGAATCACTGGGCAGGAAGTGCAGATCCTCCCCGTACTCTTaGCCTTTGATGTTAAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: PGEFLILSRVESLGRKCRSSPYS*PLMLKL Trigger: TAACTTTAACATCAAAGGCAAAGAGTACGGGGAGGA...TCTGCACTTCCTGCCCAGTGATTCTACTCTTGATAAGATCAGAAACTCTCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR TCA 72 bp | AGACCTCATAATTCTCCTTTATCCAAAGCTCCCGCTTaGGAAACATTTCTTTCTGATGGTCCTCCAGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RPHNSPLSKAPA*ETFLSDGPPGC Trigger: ACAGCCTGGAGGACCATCAGAAAGAAATGTTTCTCAAGCGGGAGCTTTGGATAAAGGAGAATTATGAGGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCTATAATGAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACGACAGCAGCATAGCATaGCCTGTCTTCTTTCTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SYNETVIENIPQGHDVTHDSSIA*PVFFLV Trigger: CACTAGAAAGAAGACAGGCAATGCTATGCTGCTGTC...GTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTCATTATAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCTATAATGAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACGTCAGTCCCCACTGTTaGCAAGGAAGCACTTTATCA | + |
|
Preference number: 3 (lower is better) Translates to: SYNETVIENIPQGHDVTHVSPHC*QGSTLS Trigger: TGATAAAGTGCTTCCTTGCAAACAGTGGGGACTGAC...GTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTCATTATAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGAGAATTTTCTTTGGCTTTTTaGAGCAGTCCCTGCTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TCKDYSKDNMLLNGSPGEFSLAF*SSPCSL Trigger: CAAGGAGCAGGGACTGCTCAAAAAAGCCAAAGAAAA...TTCTCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTTATAGATCCACCTACAATACCAGGCTATATAAGAGCACAGGTGAACAGGGGTCACGGATTTCTTCTTaGGACTTCTTGTTTTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SYRSTYNTRLYKSTGEQGSRISS*DFLFFP Trigger: AGGGAAAAACAAGAAGTCCAAAGAAGAAATCCGTGA...CCCCTGTTCACCTGTGCTCTTATATAGCCTGGTATTGTAGGTGGATCTATAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR TCA 72 bp | ATGAGTGTATATGGTACTTTGGTAGAGTATCAGGTTTaGCTCAGCCATTCTGCCATTTCCGTTCACTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MSVYGTLVEYQV*LSHSAISVHFH Trigger: ATGGAAGTGAACGGAAATGGCAGAATGGCTGAGTCAAACCTGATACTCTACCAAAGTACCATATACACTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGTTGTCATTATTCTGTTGTTGTTTTGTAAAACTGGAGACCAGGAAAGGATTTTCTTTGGCTTTTTaGAGCAGTCCCTGCTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VLLSLFCCCFVKLETRKGFSLAF*SSPCSL Trigger: CAAGGAGCAGGGACTGCTCAAAAAAGCCAAAGAAAA...TCCTTTCCTGGTCTCCAGTTTTACAAAACAACAACAGAATAATGACAACAGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTACTGCTTCCTGGCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCTCTGATCAAGTGCTGTaGTCATTATTCTGTTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PTASWHGVCQSTRKIQTISDQVL*SLFCCC Trigger: ACAACAACAGAATAATGACAACAGCACTTGATCAGA...GATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGCCAGGAAGCAGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGTTGTCATTATTCTGTTGTTGTTTTGTAAAACTGGAGACCAGGAAAGGATCCTCCCCGTACTCTTaGCCTTTGATGTTAAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: VLLSLFCCCFVKLETRKGSSPYS*PLMLKL Trigger: TAACTTTAACATCAAAGGCAAAGAGTACGGGGAGGA...TCCTTTCCTGGTCTCCAGTTTTACAAAACAACAACAGAATAATGACAACAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR TCA 72 bp | TCCATAAGTATAAAGACACACTTATTCCCTAGAGGATaGCAGCAGCATAGCATTGCCTGTCTTCTTTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SISIKTHLFPRG*QQHSIACLLSS Trigger: ACTAGAAAGAAGACAGGCAATGCTATGCTGCTGTCATCCTCTAGGGAATAAGTGTGTCTTTATACTTATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR CCA 72 bp | GTAGATCTTGAACAGAGCACTGTATATGAGTGTATATaGTACTTTGGTAGAGTATCAGGTTTGACTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VDLEQSTVYECI*YFGRVSGLTQP Trigger: TGGCTGAGTCAAACCTGATACTCTACCAAAGTACCATATACACTCATATACAGTGCTCTGTTCAAGATCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGACATAAGCAAACACTCTaGAAGAAGAAACACTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: QTCKDYSKDNMLLNGSPGHKQTL*KKKHFT Trigger: TGTGAAGTGTTTCTTCTTCAAGAGTGTTTGCTTATG...TCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGAGAACATAAGCAAACACTCTaGAAGAAGAAACACTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: TCKDYSKDNMLLNGSPGEHKQTL*KKKHFT Trigger: TGTGAAGTGTTTCTTCTTCAAGAGTGTTTGCTTATG...TTCTCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGTTGTCATTATTCTGTTGTTGTTTTGTAAAACTGGAGACCAGGAAAGGATTTCTTTCAGCAATATaGTGGATCTTAAGGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLLSLFCCCFVKLETRKGFLSAI*WILRSQ Trigger: CTGGGACCTTAAGATCCACAATATTGCTGAAAGAAA...TCCTTTCCTGGTCTCCAGTTTTACAAAACAACAACAGAATAATGACAACAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR CCA 72 bp | TTCAATAAGGTAGTACTTTTTCTTTCAGCAATATTGTaGATCTTAAGGTCCCAGGGTCAGGAGATTCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: FNKVVLFLSAIL*ILRSQGQEIPT Trigger: AGTTGGAATCTCCTGACCCTGGGACCTTAAGATCCACAATATTGCTGAAAGAAAAAGTACTACCTTATTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTTACTCTTGTGGGTATGATATTACGAGGTGTTTGAGCTTTAGCCTTTCACATAAGCAAACACTCTaGAAGAAGAAACACTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FPYSCGYDITRCLSFSLSHKQTL*KKKHFT Trigger: TGTGAAGTGTTTCTTCTTCAAGAGTGTTTGCTTATG...TGAAAGGCTAAAGCTCAAACACCTCGTAATATCATACCCACAAGAGTAAGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR-3UTR CAA 90 bp | AGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAGGTTTGACTCAGCCTCTGCAGAAATGTTaGAGAAAAGTTAGTCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: STVYECIWYFGRVSGLTQPLQKC*RKVSPI Trigger: TATAGGACTAACTTTTCTCAAACATTTCTGCAGAGG...CTGAGTCAAACCTGATACTCTACCAAAGTACCATATACACTCATATACAGTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTGAACAGAGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCATTTCTTTCAGCAATATaGTGGATCTTAAGGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLEQSTVYECIWYFGRVSFLSAI*WILRSQ Trigger: CTGGGACCTTAAGATCCACAATATTGCTGAAAGAAA...TGATACTCTACCAAAGTACCATATACACTCATATACAGTGCTCTGTTCAAGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR TCA 72 bp | TCCTGGAGAAACTGTGTCCAGAAAGACACAATAATCTaGTCAAGTGCTGTTGTCATTATTCTGTTGTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SWRNCVQKDTII*SSAVVIILLLF Trigger: AAACAACAACAGAATAATGACAACAGCACTTGATCAGATTATTGTGTCTTTCTGGACACAGTTTCTCCAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR TCA 72 bp | CCTTATGACATAAATTTGTTCTTAGATAATAATGAGTaGCAGGTGCTAACGCTGATTCTCCACAACCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PYDINLFLDNNE*QVLTLILHNPK Trigger: TTTAGGGTTGTGGAGAATCAGCGTTAGCACCTGTCACTCATTATTATCTAAGAACAAATTTATGTCATAAGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR TCA 72 bp | GAAAAATACAAACAATCAGAGATGTTTGGAAAATGGTaGGATACACTAGTACTGGTATCTCTTTCTGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: EKYKQSEMFGKW*DTLVLVSLSVP Trigger: AGGAACAGAAAGAGATACCAGTACTAGTGTATCTCACCATTTTCCAAACATCTCTGATTGTTTGTATTTTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR GCA 90 bp | CACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCGCTTGCGCGATCTCCGCCTTaGTGGCCGAGCGGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: HKGQPSRPFILHPPAVALARSPP*WPSGSR Trigger: GCGTGAGCCGCTCGGCCAGCAAGGCGGAGATCGCGC...AAGCGCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS-3UTR CCA 90 bp | AACCCACTCTCCTGGAGAGTTTCTGATCTTATCAAGAGTAGAATCACTGGGCAGCGATCTCCGCCTTGCTaGCCGAGCGGCTCACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPLSWRVSDLIKSRITGQRSPPC*PSGSRP Trigger: TGGGCGTGAGCCGCTCGGCCAGCAAGGCGGAGATCG...CTGCCCAGTGATTCTACTCTTGATAAGATCAGAAACTCTCCAGGAGAGTGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS-3UTR CCA 90 bp | CGTCCACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCAAGTGGTGCTTCTGCTaGTGTCCATCCATCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPQRSAVQALHSSSTCGSKWCFC*CPSIPN Trigger: ATTGGGGATGGATGGACACCAGCAGAAGCACCACTT...GCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTGGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS-3UTR CCA 90 bp | CACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCGCTTCATCCCCAATCCTCTTaGGCATATGCAGGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HKGQPSRPFILHPPAVALHPQSS*AYAGGL Trigger: CAGTCCTCCTGCATATGCCCAAGAGGATTGGGGATG...AAGCGCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150309.9 |
||
| CDS-3UTR GCA 90 bp | TTCAGCAATATTGTGGATCTTAAGGTCCCAGGGTCAGGAGATTCCAACTTCTTTGCGCGATCTCCGCCTTaGTGGCCGAGCGGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: FSNIVDLKVPGSGDSNFFARSPP*WPSGSR Trigger: GCGTGAGCCGCTCGGCCAGCAAGGCGGAGATCGCGC...AAAGAAGTTGGAATCTCCTGACCCTGGGACCTTAAGATCCACAATATTGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR CAA 72 bp | GTGCGTGGGGAGGGCTGCAAAGTCAGTCCCCACTGTTaGCAAGGAAGCACTTTATCAACCAAGCTACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRGEGCKVSPHC*QGSTLSTKLPS Trigger: ACTGGGTAGCTTGGTTGATAAAGTGCTTCCTTGCAAACAGTGGGGACTGACTTTGCAGCCCTCCCCACGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR GCA 90 bp | CGTCCACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCATCCTCTTGGGCATATaGAGGAGGACTGGAATACAA | + |
|
Preference number: 4 (lower is better) Translates to: RPQRSAVQALHSSSTCGSILLGI*RRTGIQ Trigger: TTGTATTCCAGTCCTCCTGCATATGCCCAAGAGGAT...GCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTGGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150309.9 |
||
| CDS-3UTR CCA 90 bp | CACATAAGACCCTCATGTGCATTACAGTTTAATCACACAAGTAATGCAGGGAGGCGATCTCCGCCTTGCTaGCCGAGCGGCTCACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HIRPSCALQFNHTSNAGRRSPPC*PSGSRP Trigger: TGGGCGTGAGCCGCTCGGCCAGCAAGGCGGAGATCG...CCTCCCTGCATTACTTGTGTGATTAAACTGTAATGCACATGAGGGTCTTATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS-3UTR CCA 90 bp | CAAACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGAGGGCCGGTAGCGATCTaGGTGGTAGCGCCGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTCKDYSKDNMLLNGSPGGPVAI*VVAPGQ Trigger: CTGGCCCGGCGCTACCACCCAGATCGCTACCGGCCC...TCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTTGTCATTATTCTGTTGTTGTTTTGTAAAACTGGAGACCAGGAAAGGAGGGCCGGTAGCGATCTaGGTGGTAGCGCCGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLSLFCCCFVKLETRKGGPVAI*VVAPGQ Trigger: CTGGCCCGGCGCTACCACCCAGATCGCTACCGGCCC...TCCTTTCCTGGTCTCCAGTTTTACAAAACAACAACAGAATAATGACAACAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS-3UTR GCA 90 bp | GCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCAGAGATGTTTGGAAGCGCGATCTCCGCCTTaGTGGCCGAGCGGCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: AWCLSEYQKNTNNQRCLEARSPP*WPSGSR Trigger: GCGTGAGCCGCTCGGCCAGCAAGGCGGAGATCGCGC...TTCCAAACATCTCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR GCA 90 bp | ACACGAATCGATGAAAAACAGGCAGCAATGAACAGCCATGCTCAGACAGCCCCATTGGGGCCAGGCGCCTaGTGTAGTAGTGGTAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRIDEKQAAMNSHAQTAPLGPGA*CSSGSN Trigger: ATTACTACCACTACTACAGCAGGCGCCTGGCCCCAA...TGGGGCTGTCTGAGCATGGCTGTTCATTGCTGCCTGTTTTTCATCGATTCGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR CCA 90 bp | GTGCAGATACACAAGTGTGTGGGTGTATGTGGGGACCAGAAGACAGGCTTGATTGCGATTTCTGTTGCCTaGATGCGGTACTTGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: VQIHKCVGVCGDQKTGLIAISVA*MRYLGT Trigger: AGTGCCCAAGTACCGCATCCAGGCAACAGAAATCGC...AATCAAGCCTGTCTTCTGGTCCCCACATACACCCACACACTTGTGTATCTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR TCA 90 bp | ATGGTATGTGCGTGGGGAGGGCTGCAAAGTCAGTCCCCACTGTTTGCAAGGAAGCACCAGCTGAAATACTaGAACATTGAAATGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MVCAWGGLQSQSPLFARKHQLKY*NIEMAH Trigger: GTGTGCCATTTCAATGTTTCAGTATTTCAGCTGGTG...CTTCCTTGCAAACAGTGGGGACTGACTTTGCAGCCCTCCCCACGCACATACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR CCA 90 bp | GCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCAGAGATGTTTGGAACGATCTCCGCCTTGCTaGCCGAGCGGCTCACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWCLSEYQKNTNNQRCLERSPPC*PSGSRP Trigger: TGGGCGTGAGCCGCTCGGCCAGCAAGGCGGAGATCG...TTCCAAACATCTCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR GCA 90 bp | CCTGGAGAGTTTCTGATCTTATCAAGAGTAGAATCACTGGGCAGGAAGTGCAGATTTCTGTTGCCTGGATaGGGTACTTGGGCACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGEFLILSRVESLGRKCRFLLPG*GTWALW Trigger: CCACAGTGCCCAAGTACCGCATCCAGGCAACAGAAA...TCTGCACTTCCTGCCCAGTGATTCTACTCTTGATAAGATCAGAAACTCTCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR GCA 90 bp | GAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACTCTCCTGGACTTGGCGATTTCTGTTaGCTGGATGCGGTACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETVIENIPQGHDVTHSPGLGDFC*LDAVLG Trigger: CCCAAGTACCGCATCCAGGCAACAGAAATCGCCAAG...TCCAGGAGAGTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR CCA 90 bp | CAAACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGAGCAGTCCCTGCTCCTTaGCGATTTCTGTTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTCKDYSKDNMLLNGSPGAVPAP*RFLLPG Trigger: TCCAGGCAACAGAAATCGCCAAGGAGCAGGGACTGC...TCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR TCA 90 bp | TCCTATAATGAGACTGTAATTGAAAACATCCCACAAGGACATGATGTAACCCACTGTTTCTTCCTGTCCTaGGCCTCGACAAGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYNETVIENIPQGHDVTHCFFLS*ASTSRA Trigger: TGCCCTGCTTGTCGAGGCTCAGGACAGGAAGAAACA...GTGGGTTACATCATGTCCTTGTGGGATGTTTTCAATTACAGTCTCATTATAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS-3UTR TCA 90 bp | AGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAGGTTTGACTCAGTGTTTCTTCCTGTCCTaGGCCTCGACAAGCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STVYECIWYFGRVSGLTQCFFLS*ASTSRA Trigger: TGCCCTGCTTGTCGAGGCTCAGGACAGGAAGAAACA...CTGAGTCAAACCTGATACTCTACCAAAGTACCATATACACTCATATACAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS-3UTR CCA 90 bp | AACCCACTCTCCTGGAGAGTTTCTGATCTTATCAAGAGTAGAATCACTGGGCAGCATATGCAGGAGGACTaGAATACAACCACCGATATC | + |
|
Preference number: 4 (lower is better) Translates to: NPLSWRVSDLIKSRITGQHMQED*NTTTDI Trigger: GATATCGGTGGTTGTATTCCAGTCCTCCTGCATATG...CTGCCCAGTGATTCTACTCTTGATAAGATCAGAAACTCTCCAGGAGAGTGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150309.9 |
||
| CDS-3UTR TCA 90 bp | GATCTTGAACAGAGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAGTGTTTCTTCATCCTTaGGCGTCTCGTAGGCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: DLEQSTVYECIWYFGRVSVFLHP*ASRRRS Trigger: CGACCGCCTACGAGACGCTCAAGGATGAAGAAACAC...TGATACTCTACCAAAGTACCATATACACTCATATACAGTGCTCTGTTCAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR TCA 90 bp | GCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCAGAGATGTTTGGAAGAACAGGGGCGAGGATaGCCTGAAACAAGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AWCLSEYQKNTNNQRCLEEQGRG*PETRGG Trigger: ACCTCCTCTTGTTTCAGGTCATCCTCGCCCCTGTTC...TTCCAAACATCTCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR CCA 90 bp | CAAACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGACATCCCCAATCCTCTTaGGCATATGCAGGAGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: QTCKDYSKDNMLLNGSPGHPQSS*AYAGGL Trigger: AAGTCCTCCTGCATATGCCCAAGAGGATTGGGGATG...TCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153467.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGCAATATTGTGGATCTTAAGGTCCCAGGGTCAGGAGATTCCAACTTCTTTATGTCTAGAGGTAAGTaGTGCTTCTGCTGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSNIVDLKVPGSGDSNFFMSRGK*CFCWCP Trigger: TGGACACCAGCAGAAGCACCACTTACCTCTAGACAT...AAAGAAGTTGGAATCTCCTGACCCTGGGACCTTAAGATCCACAATATTGCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| 3UTR CAA 72 bp | GTCCTTCCCTCTACCTACTGCTTCCTGGCATGGTGTTaGTCAGAGTACCAGAAAAATACAAACAATCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLPSTYCFLAWC*SEYQKNTNNQR Trigger: TCTCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGCCAGGAAGCAGTAGGTAGAGGGAAGGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR TCA 90 bp | AACCCACTCTCCTGGAGAGTTTCTGATCTTATCAAGAGTAGAATCACTGGGCAGGAAATACTGAAACATTaGAATGGCACACACACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NPLSWRVSDLIKSRITGQEILKH*NGTHTD Trigger: GTCAGTGTGTGTGCCATTTCAATGTTTCAGTATTTC...CTGCCCAGTGATTCTACTCTTGATAAGATCAGAAACTCTCCAGGAGAGTGGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR TCA 90 bp | ACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGAGAATCCAGGCTGTCAAACTaGGACTGGGACATCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TCKDYSKDNMLLNGSPGESRLSN*DWDIFI Trigger: TATGAAGATGTCCCAGTCTCAGTTTGACAGCCTGGA...TTCTCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR CCA 90 bp | GATCTTGAACAGAGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAAAGTGGTGCTTCTGCTaGTGTCCATCCATCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: DLEQSTVYECIWYFGRVSKWCFC*CPSIPN Trigger: ATTGGGGATGGATGGACACCAGCAGAAGCACCACTT...TGATACTCTACCAAAGTACCATATACACTCATATACAGTGCTCTGTTCAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS-3UTR TCA 90 bp | TTTCCTTACTCTTGTGGGTATGATATTACGAGGTGTTTGAGCTTTAGCCTTTCAAGAAACATTTCTTTCTaGTGGTCCTCCAGGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPYSCGYDITRCLSFSLSRNISF*WSSRLS Trigger: TGACAGCCTGGAGGACCATCAGAAAGAAATGTTTCT...TGAAAGGCTAAAGCTCAAACACCTCGTAATATCATACCCACAAGAGTAAGGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR CCA 90 bp | CAAACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGAGCTATAGTATTCTTCTaGGTGATCCAGCATGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTCKDYSKDNMLLNGSPGAIVFF*VIQHVV Trigger: GACTACATGCTGGATCACCCAGAAGAATACTATAGC...TCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| CDS-3UTR CCA 90 bp | GATCTTGAACAGAGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCAATGTCTAGAGGTAAGTaGTGCTTCTGCTGGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLEQSTVYECIWYFGRVSMSRGK*CFCWCP Trigger: TGGACACCAGCAGAAGCACCACTTACCTCTAGACAT...TGATACTCTACCAAAGTACCATATACACTCATATACAGTGCTCTGTTCAAGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS-3UTR TCA 90 bp | GCATGGTGTTTGTCAGAGTACCAGAAAAATACAAACAATCAGAGATGTTTGGAACTGTGGCTAGGTAGCTaGTTGCTTTATTGTAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AWCLSEYQKNTNNQRCLELWLGS*LLYCSY Trigger: ATAGCTACAATAAAGCAATCAGCTACCTAGCCACAG...TTCCAAACATCTCTGATTGTTTGTATTTTTCTGGTACTCTGACAAACACCATGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
||
| 3UTR CAA 72 bp | TTTATGATGTTCTCCTCCTCATCACGGATTTCTTCTTaGGACTTCTTGTTTTTCCCTTTTTCTTTGGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FMMFSSSSRISS*DFLFFPFSLAF Trigger: AAAAGCCAAAGAAAAAGGGAAAAACAAGAAGTCCAAAGAAGAAATCCGTGATGAGGAGGAGAACATCATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
||
| CDS GCA 90 bp | TGCTGGCCGAGCGGCTCACGCCCAGCACCTCGTAGCAGTCGCGCGTaGCGCAGTACAGCCCTTCCACCAGGGCCTCGGCGGGCCGCGCCA | + |
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Preference number: 5 (lower is better) Translates to: CWPSGSRPAPRSSRA*RSTALPPGPRRAAP Trigger: TGGCGCGGCCCGCCGAGGCCCTGGTGGAAGGGCTGTACTGCGGCACGCGCGACTGCTACGAGGTGCTGGGCGTGAGCCGCTCGGCCAGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS-3UTR CAA 90 bp | CACAAAGGTCAGCCGTCCAGGCCCTTCATTCTTCATCCACCTGCGGTAGCGCTTCGCGCGATCTCCGCCTaGCTGGCCGAGCGGCTCACG | + |
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Preference number: 5 (lower is better) Translates to: HKGQPSRPFILHPPAVALRAISA*LAERLT Trigger: CGTGAGCCGCTCGGCCAGCAAGGCGGAGATCGCGCG...AAGCGCTACCGCAGGTGGATGAAGAATGAAGGGCCTGGACGGCTGACCTTTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS-3UTR CAA 90 bp | CACATAAGACCCTCATGTGCATTACAGTTTAATCACACAAGTAATGCAGGGAGGCGCGCGATCTCCGCCTaGCTGGCCGAGCGGCTCACG | + |
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Preference number: 5 (lower is better) Translates to: HIRPSCALQFNHTSNAGRRAISA*LAERLT Trigger: CGTGAGCCGCTCGGCCAGCAAGGCGGAGATCGCGCG...CCTCCCTGCATTACTTGTGTGATTAAACTGTAATGCACATGAGGGTCTTATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS-3UTR CAA 90 bp | TTTCCTTACTCTTGTGGGTATGATATTACGAGGTGTTTGAGCTTTAGCCTTTCACGCGCGATCTCCGCCTaGCTGGCCGAGCGGCTCACG | + |
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Preference number: 5 (lower is better) Translates to: FPYSCGYDITRCLSFSLSRAISA*LAERLT Trigger: CGTGAGCCGCTCGGCCAGCAAGGCGGAGATCGCGCG...TGAAAGGCTAAAGCTCAAACACCTCGTAATATCATACCCACAAGAGTAAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| CDS GCA 90 bp | GCAATACATTCCTGGCTTCTAATGTCTAGAGGTAAGTGGTGCTTCTaGTGGTGTCCATCCATCCCCAATCCTCTTGGGCATATGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: AIHSWLLMSRGKWCF*WCPSIPNPLGHMQE Trigger: CTCCTGCATATGCCCAAGAGGATTGGGGATGGATGGACACCAGCAGAAGCACCACTTACCTCTAGACATTAGAAGCCAGGAATGTATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS GCA 90 bp | AGCAGGGCAATACATTCCTGGCTTCTAATGTCTAGAGGTAAGTGGTaGTTCTGCTGGTGTCCATCCATCCCCAATCCTCTTGGGCATATG | + |
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Preference number: 5 (lower is better) Translates to: SRAIHSWLLMSRGKW*FCWCPSIPNPLGHM Trigger: CATATGCCCAAGAGGATTGGGGATGGATGGACACCAGCAGAAGCACCACTTACCTCTAGACATTAGAAGCCAGGAATGTATTGCCCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS CCA 90 bp | ATACATTCCTGGCTTCTAATGTCTAGAGGTAAGTGGTGCTTCTGCTaGTGTCCATCCATCCCCAATCCTCTTGGGCATATGCAGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: IHSWLLMSRGKWCFC*CPSIPNPLGHMQED Trigger: GTCCTCCTGCATATGCCCAAGAGGATTGGGGATGGATGGACACCAGCAGAAGCACCACTTACCTCTAGACATTAGAAGCCAGGAATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS CCA 90 bp | ACAAGCAGGGCAATACATTCCTGGCTTCTAATGTCTAGAGGTAAGTaGTGCTTCTGCTGGTGTCCATCCATCCCCAATCCTCTTGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: TSRAIHSWLLMSRGK*CFCWCPSIPNPLGH Trigger: ATGCCCAAGAGGATTGGGGATGGATGGACACCAGCAGAAGCACCACTTACCTCTAGACATTAGAAGCCAGGAATGTATTGCCCTGCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS-3UTR CAA 90 bp | AGTTATAGATCCACCTACAATACCAGGCTATATAAGAGCACAGGTGAACAGGGGCCATCCCCAATCCTCTaGGGCATATGCAGGAGGACT | + |
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Preference number: 5 (lower is better) Translates to: SYRSTYNTRLYKSTGEQGPSPIL*GICRRT Trigger: AGTCCTCCTGCATATGCCCAAGAGGATTGGGGATGG...CCCCTGTTCACCTGTGCTCTTATATAGCCTGGTATTGTAGGTGGATCTATAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS-3UTR CAA 90 bp | AAGACAGACAAAAGAATATCCAAAGATAGTCTGAGTCTTCACTGGCTGAACATCTTTTCTTTGGCTTTTTaGAGCAGTCCCTGCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KTDKRISKDSLSLHWLNIFSLAF*SSPCSL Trigger: CAAGGAGCAGGGACTGCTCAAAAAAGCCAAAGAAAA...GATGTTCAGCCAGTGAAGACTCAGACTATCTTTGGATATTCTTTTGTCTGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| CDS-3UTR CAA 90 bp | ACCTGTAAGGACTACAGTAAGGACAATATGTTACTGAATGGTTCTCCTGGAGAATCCTCCCCGTACTCTTaGCCTTTGATGTTAAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: TCKDYSKDNMLLNGSPGESSPYS*PLMLKL Trigger: TAACTTTAACATCAAAGGCAAAGAGTACGGGGAGGA...TTCTCCAGGAGAACCATTCAGTAACATATTGTCCTTACTGTAGTCCTTACAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| CDS-3UTR CAA 90 bp | GATCTTGAACAGAGCACTGTATATGAGTGTATATGGTACTTTGGTAGAGTATCATCACGGATTTCTTCTTaGGACTTCTTGTTTTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: DLEQSTVYECIWYFGRVSSRISS*DFLFFP Trigger: AGGGAAAAACAAGAAGTCCAAAGAAGAAATCCGTGA...TGATACTCTACCAAAGTACCATATACACTCATATACAGTGCTCTGTTCAAGATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095070.4 |
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| CDS GCA 72 bp | GGGCCAGCTGACGGTAGGCCCGCGCGATCTCCGCCTTaGTGGCCGAGCGGCTCACGCCCAGCACCTCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: GPADGRPARSPP*WPSGSRPAPRS Trigger: GCTACGAGGTGCTGGGCGTGAGCCGCTCGGCCAGCAAGGCGGAGATCGCGCGGGCCTACCGTCAGCTGGCCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS GCA 72 bp | AGCGGCTCACGCCCAGCACCTCGTAGCAGTCGCGCGTaGCGCAGTACAGCCCTTCCACCAGGGCCTCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SGSRPAPRSSRA*RSTALPPGPRR Trigger: CCGCCGAGGCCCTGGTGGAAGGGCTGTACTGCGGCACGCGCGACTGCTACGAGGTGCTGGGCGTGAGCCGCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS CCA 72 bp | CCAGCTGACGGTAGGCCCGCGCGATCTCCGCCTTGCTaGCCGAGCGGCTCACGCCCAGCACCTCGTAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PADGRPARSPPC*PSGSRPAPRSS Trigger: ACTGCTACGAGGTGCTGGGCGTGAGCCGCTCGGCCAGCAAGGCGGAGATCGCGCGGGCCTACCGTCAGCTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095070.4 ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS CCA 72 bp | GTGCTTCTGCTGGTGTCCATCCATCCCCAATCCTCTTaGGCATATGCAGGAGGACTTGAGCGTCTCGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: VLLLVSIHPQSS*AYAGGLERLVG Trigger: GCCTACGAGACGCTCAAGTCCTCCTGCATATGCCCAAGAGGATTGGGGATGGATGGACACCAGCAGAAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153467.3 |
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| CDS CAA 72 bp | GGTGCTTCTGCTGGTGTCCATCCATCCCCAATCCTCTaGGGCATATGCAGGAGGACTGGAATACAACCACCG | + |
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Preference number: 6 (lower is better) Translates to: GASAGVHPSPIL*GICRRTGIQPP Trigger: CGGTGGTTGTATTCCAGTCCTCCTGCATATGCCCAAGAGGATTGGGGATGGATGGACACCAGCAGAAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150309.9 |
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| CDS CCA 72 bp | GTGCTTCTGCTGGTGTCCATCCATCCCCAATCCTCTTaGGCATATGCAGGAGGACTGGAATACAACCACCGA | + |
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Preference number: 6 (lower is better) Translates to: VLLLVSIHPQSS*AYAGGLEYNHR Trigger: TCGGTGGTTGTATTCCAGTCCTCCTGCATATGCCCAAGAGGATTGGGGATGGATGGACACCAGCAGAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150309.9 |
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| CDS GCA 72 bp | TCCTGGCTTCTAATGTCTAGAGGTAAGTGGTGCTTCTaGTGGTGTCCATCCATCCCCAATCCTCTTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SWLLMSRGKWCF*WCPSIPNPLGH Trigger: ATGCCCAAGAGGATTGGGGATGGATGGACACCAGCAGAAGCACCACTTACCTCTAGACATTAGAAGCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS CCA 72 bp | TGGCTTCTAATGTCTAGAGGTAAGTGGTGCTTCTGCTaGTGTCCATCCATCCCCAATCCTCTTGGGCATATG | + |
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Preference number: 6 (lower is better) Translates to: WLLMSRGKWCFC*CPSIPNPLGHM Trigger: CATATGCCCAAGAGGATTGGGGATGGATGGACACCAGCAGAAGCACCACTTACCTCTAGACATTAGAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS CCA 72 bp | GCAATACATTCCTGGCTTCTAATGTCTAGAGGTAAGTaGTGCTTCTGCTGGTGTCCATCCATCCCCAATCCT | + |
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Preference number: 6 (lower is better) Translates to: AIHSWLLMSRGK*CFCWCPSIPNP Trigger: AGGATTGGGGATGGATGGACACCAGCAGAAGCACCACTTACCTCTAGACATTAGAAGCCAGGAATGTATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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| CDS GCA 72 bp | ATACATTCCTGGCTTCTAATGTCTAGAGGTAAGTGGTaGTTCTGCTGGTGTCCATCCATCCCCAATCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: IHSWLLMSRGKW*FCWCPSIPNPL Trigger: AAGAGGATTGGGGATGGATGGACACCAGCAGAAGCACCACTTACCTCTAGACATTAGAAGCCAGGAATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000150309.9 ENSMUST00000153467.3 |
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