Pregenerated sensors for DNAJC24 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027166

Ensembl transcript IDs: ENSMUST00000102555.11, ENSMUST00000155811.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TATTTCCCACCACATCGACAGCTCAGAAAGAAAGATTCATCACCATaGCGCTGCAGGTCATACTTTTTCTTGGTTTCTTCATTCCCTAGA	+
Preference number: 5 (lower is better) Translates to: YFPPHRQLRKKDSSP*RCRSYFFLVSSFPR Trigger: TCTAGGGAATGAAGAAACCAAGAAAAAGTATGACCTGCAGCGGCATGGTGATGAATCTTTCTTTCTGAGCTGTCGATGTGGTGGGAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155811.2
CDS TCA 72 bp	GGAGCTCCACAATCAGCGAGCACGCGTCACAGGAGATaGGGGTGGCTTCTTGTGCTTCATCCTTGGAGACAG	+
Preference number: 6 (lower is better) Translates to: GAPQSASTRHRR*GWLLVLHPWRQ Trigger: CTGTCTCCAAGGATGAAGCACAAGAAGCCACCCTCATCTCCTGTGACGCGTGCTCGCTGATTGTGGAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102555.11 ENSMUST00000155811.2
CDS CAA 72 bp	TCACAGGAGATGAGGGTGGCTTCTTGTGCTTCATCCTaGGAGACAGTGTATTTCCCACCACATCGACAGCTC	+
Preference number: 6 (lower is better) Translates to: SQEMRVASCASS*ETVYFPPHRQL Trigger: GAGCTGTCGATGTGGTGGGAAATACACTGTCTCCAAGGATGAAGCACAAGAAGCCACCCTCATCTCCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102555.11 ENSMUST00000155811.2
CDS CCA 72 bp	CCACATCGACAGCTCAGAAAGAAAGATTCATCACCTTaGTTCCAGGACATCTCTTCAAGGCGCACCTGTGCA	+
Preference number: 6 (lower is better) Translates to: PHRQLRKKDSSP*FQDISSRRTCA Trigger: TGCACAGGTGCGCCTTGAAGAGATGTCCTGGAACCAAGGTGATGAATCTTTCTTTCTGAGCTGTCGATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102555.11
CDS CAA 90 bp	GTATTTCCCACCACATCGACAGCTCAGAAAGAAAGATTCATCACCTaGGTTCCAGGACATCTCTTCAAGGCGCACCTGTGCATCTACTGG	+
Preference number: 6 (lower is better) Translates to: VFPTTSTAQKERFIT*VPGHLFKAHLCIYW Trigger: CCAGTAGATGCACAGGTGCGCCTTGAAGAGATGTCCTGGAACCAAGGTGATGAATCTTTCTTTCTGAGCTGTCGATGTGGTGGGAAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102555.11
CDS GCA 72 bp	CGACAGCTCAGAAAGAAAGATTCATCACCATGCCGCTaGAGGTCATACTTTTTCTTGGTTTCTTCATTCCCT	+
Preference number: 6 (lower is better) Translates to: RQLRKKDSSPCR*RSYFFLVSSFP Trigger: AGGGAATGAAGAAACCAAGAAAAAGTATGACCTGCAGCGGCATGGTGATGAATCTTTCTTTCTGAGCTGTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155811.2

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