Pregenerated sensors for DNAJC22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038009Ensembl transcript IDs: ENSMUST00000061295.7
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTaGAGGATGGTGCTGACAAGACTGAGTCCATCCTCAAGTGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: SPLLPAVSLTVRSWV*RMVLTRLSPSSSGC Trigger: GCAACCACTTGAGGATGGACTCAGTCTTGTCAGCACCATCCTCAAAACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR TCA 90 bp | AGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTAGGCCAGAGGGCCGGTaGAGGCGAGGTAAGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: RFPSPLLPAVSLTVRSWVRPEGR*RRGKPS Trigger: GCTTGGCTTACCTCGCCTTCACCGGCCCTCTGGCCT...AACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | AGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTCCAGGAAGTGTCTCTaGGCCTCCTCCGTCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: RFPSPLLPAVSLTVRSWVSRKCL*ASSVWC Trigger: GCACCAGACGGAGGAGGCCCAGAGACACTTCCTGGA...AACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR TCA 90 bp | AGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTGGACTCTGTTGGCTTaGGCCACAAAGCTCGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RFPSPLLPAVSLTVRSWVWTLLA*ATKLGS Trigger: GCTCCCGAGCTTTGTGGCTCAAGCCAACAGAGTCCA...AACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | TGTAAGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGCTTCCCAGGTACAGGTaGTGGAGCCCAACAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: CKVSLPSAASSFFNCQVLLPRYR*WSPTGP Trigger: GGGTCCTGTTGGGCTCCACCACCTGTACCTGGGAAG...CAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR GCA 90 bp | CCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTTGAGGGGAACCCAGGGTTTCTaGCACGTAGTTAATGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PSPLLPAVSLTVRSWVLRGTQGF*HVVNGG Trigger: GCCACCATTAACTACGTGGCAGAAACCCTGGGTTCC...CCTCAAAACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | ACCCTTCTCATCCCTGTAAGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAATCCAGAGCAGGGCATaGCTGTCCCTTCCCAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: TLLIPVRFPSPLLPAVSLIQSRA*LSLPRY Trigger: GTACCTGGGAAGGGACAGCCATGCCCTGCTCTGGAT...TAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCTTACAGGGATGAGAAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | GTAAGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGAAGGAGACTGAGAGGTaGTCTCTCCTCTTCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: VRFPSPLLPAVSLTVRSWKETER*SLLFRP Trigger: AGGCCGGAAGAGGAGAGACCACCTCTCAGTCTCCTT...CCAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR TCA 90 bp | GCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTTGAGGATGGTGCTGACAAGGTCTGGTGCCGGTTGTaGTCTGGGTGCCAGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: ASSFFNCQVLGFEDGADKVWCRL*SGCQTF Trigger: GAAAGTCTGGCACCCAGATCACAACCGGCACCAGAC...CTTGTCAGCACCATCCTCAAAACCCAGGACCTGACAGTTAAAGAAACTGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | CCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTTGAGGACTTCATACGCAGCCTaGATCTCCAGGAAGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: PSPLLPAVSLTVRSWVLRTSYAA*ISRKCL Trigger: GAGACACTTCCTGGAGATCCAGGCTGCGTATGAAGT...CCTCAAAACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | TGTAAGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGTATCGTCGATGCTTCTaGGCTGTAATGCTGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: CKVSLPSAASSFFNCQVLYRRCF*AVMLAA Trigger: GGCTGCCAGCATTACAGCCCAGAAGCATCGACGATA...CAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR TCA 90 bp | ATCCCTGTAAGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGCTAGGCTTCTTGGGCTaGCTCAAGACTTCATACGCA | + |
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Preference number: 4 (lower is better) Translates to: IPVRFPSPLLPAVSLTVRLGFLG*LKTSYA Trigger: TGCGTATGAAGTCTTGAGTCAGCCCAAGAAGCCTAG...CCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCTTACAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | ACCCTTCTCATCCCTGTAAGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAAACTCTGGACTCTGTTaGCTTGAGCCACAAAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: TLLIPVRFPSPLLPAVSLNSGLC*LEPQSS Trigger: CGAGCTTTGTGGCTCAAGCCAACAGAGTCCAGAGTT...TAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCTTACAGGGATGAGAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | GTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTTGAGGCGGCCAAGAAGTaGGAAAAAGCTGAACCAACT | + |
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Preference number: 4 (lower is better) Translates to: VSLPSAASSFFNCQVLGFEAAKK*EKAEPT Trigger: AGTTGGTTCAGCTTTTTCCCACTTCTTGGCCGCCTC...AAAACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR TCA 90 bp | AGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTGAAGTGGGAAAAAGCTaGACCAACTCAAGAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RFPSPLLPAVSLTVRSWVEVGKS*TNSRRN Trigger: GTTCCTTCTTGAGTTGGTTCAGCTTTTTCCCACTTC...AACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | ACCCTTCTCATCCCTGTAAGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACACCCACTACTATCTaGGAAGCAAAGCGAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: TLLIPVRFPSPLLPAVSLTPTTI*EAKRRR Trigger: TCTCCTTCGCTTTGCTTCCCAGATAGTAGTGGGTGT...TAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCTTACAGGGATGAGAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | AGGTTTCCCTCCCCTCTGCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTTAAAGTCTGAGGTCTaGTTACCAACAGCAGCTACC | + |
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Preference number: 4 (lower is better) Translates to: RFPSPLLPAVSLTVRSWVLKSEV*LPTAAT Trigger: GGTAGCTGCTGTTGGTAACCAGACCTCAGACTTTAA...AACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAGCAGAGGGGAGGGAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| 3UTR CAA 72 bp | CTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTaGAGGATGGTGCTGACAAGACTGAGTCCATCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LPAVSLTVRSWV*RMVLTRLSPSS Trigger: TGAGGATGGACTCAGTCTTGTCAGCACCATCCTCAAAACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR GCA 90 bp | GCTGCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTTGAGGATGGTGCTGACTATTTCTTCATTAGTTaGTCCTTCTGGGACGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: AASSFFNCQVLGFEDGADYFFIS*SFWDAQ Trigger: CTGGGCGTCCCAGAAGGAGCAACTAATGAAGAAATA...GTCAGCACCATCCTCAAAACCCAGGACCTGACAGTTAAAGAAACTGCTGGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR TCA 90 bp | GCCAGCAGTTTCTTTAACTGTCAGGTCCTGGGTTTTGAGGATGGTGCTGACAAGGGTATTCTTAAAGTCTaGGGTCTGGTTACCAACAGC | + |
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Preference number: 4 (lower is better) Translates to: ASSFFNCQVLGFEDGADKGILKV*GLVTNS Trigger: GCTGTTGGTAACCAGACCTCAGACTTTAAGAATACC...CTTGTCAGCACCATCCTCAAAACCCAGGACCTGACAGTTAAAGAAACTGCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR TCA 90 bp | GTAGTCAAGAATTCAACACATAAATATATTCTCTACCCTTCTCATCCCTGTAAGGGAACCGGCTGCTGTTaGAGCCAGGACCTCCGACCA | + |
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Preference number: 4 (lower is better) Translates to: VVKNSTHKYILYPSHPCKGTGCC*SQDLRP Trigger: TGGTCGGAGGTCCTGGCTTCAACAGCAGCCGGTTCC...CTTACAGGGATGAGAAGGGTAGAGAATATATTTATGTGTTGAATTCTTGACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR CCA 90 bp | ACACATAAATATATTCTCTACCCTTCTCATCCCTGTAAGGTTTCCCTCCCCTCTAGCTTTTCCCACTCCTaGAACCGGCTGCTGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: THKYILYPSHPCKVSLPSSFSHS*NRLLLK Trigger: CTTCAACAGCAGCCGGTTCCAGGAGTGGGAAAAGCT...AGAGGGGAGGGAAACCTTACAGGGATGAGAAGGGTAGAGAATATATTTATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR TCA 90 bp | ACACATAAATATATTCTCTACCCTTCTCATCCCTGTAAGGTTTCCCTCCCCTCTCCATGGAAGAAAGGCTaGCTAGAGCCACAAGACCAA | + |
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Preference number: 4 (lower is better) Translates to: THKYILYPSHPCKVSLPSPWKKG*LEPQDQ Trigger: TTGGTCTTGTGGCTCTAGTCAGCCTTTCTTCCATGG...AGAGGGGAGGGAAACCTTACAGGGATGAGAAGGGTAGAGAATATATTTATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS-3UTR GCA 90 bp | GTAGTCAAGAATTCAACACATAAATATATTCTCTACCCTTCTCATCCCTGTAAGGCTTTGTATCGTCGATaGTTCTGGGCTGTAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: VVKNSTHKYILYPSHPCKALYRR*FWAVML Trigger: CAGCATTACAGCCCAGAAGCATCGACGATACAAAGC...CTTACAGGGATGAGAAGGGTAGAGAATATATTTATGTGTTGAATTCTTGACTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS TCA 90 bp | CTCTCCTCTTCCGGCCTCTGTTTCCAACTCTGGACTCTGTTGGCTTaGGCCACAAAGCTCGGGAGCTTCCAGAATTCCCAGAGCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: LSSSGLCFQLWTLLA*ATKLGSFQNSQSQP Trigger: GGGCTGGCTCTGGGAATTCTGGAAGCTCCCGAGCTTTGTGGCTCAAGCCAACAGAGTCCAGAGTTGGAAACAGAGGCCGGAAGAGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CCA 90 bp | CAGGAAGTGTCTCTGGGCCTCCTCCGTCTGGTGCCGGTTGTGATCTaGGTGCCAGACTTTCACCAGGTCCCGGTAACTCCGATGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: QEVSLGLLRLVPVVI*VPDFHQVPVTPMYF Trigger: GAAATACATCGGAGTTACCGGGACCTGGTGAAAGTCTGGCACCCAGATCACAACCGGCACCAGACGGAGGAGGCCCAGAGACACTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CCA 90 bp | GTGGTCTCTCCTCTTCCGGCCTCTGTTTCCAACTCTGGACTCTGTTaGCTTGAGCCACAAAGCTCGGGAGCTTCCAGAATTCCCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: VVSPLPASVSNSGLC*LEPQSSGASRIPRA Trigger: GGCTCTGGGAATTCTGGAAGCTCCCGAGCTTTGTGGCTCAAGCCAACAGAGTCCAGAGTTGGAAACAGAGGCCGGAAGAGGAGAGACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS GCA 90 bp | CGCACACTAAGTGTCTCTGACCCCGCTGAGGCTTTGTATCGTCGATaGTTCTGGGCTGTAATGCTGGCAGCCAAACTGATAGGCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: RTLSVSDPAEALYRR*FWAVMLAAKLIGRM Trigger: CATCCTGCCTATCAGTTTGGCTGCCAGCATTACAGCCCAGAAGCATCGACGATACAAAGCCTCAGCGGGGTCAGAGACACTTAGTGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CCA 90 bp | GACGTGAGGAAGGCCGCTCCTAAGGTATTCTTAAAGTCTGAGGTCTaGTTACCAACAGCAGCTACCAGCAAGACCCCTAAGCCAACAGCC | + |
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Preference number: 5 (lower is better) Translates to: DVRKAAPKVFLKSEV*LPTAATSKTPKPTA Trigger: GGCTGTTGGCTTAGGGGTCTTGCTGGTAGCTGCTGTTGGTAACCAGACCTCAGACTTTAAGAATACCTTAGGAGCGGCCTTCCTCACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CCA 90 bp | CTAAGTGTCTCTGACCCCGCTGAGGCTTTGTATCGTCGATGCTTCTaGGCTGTAATGCTGGCAGCCAAACTGATAGGCAGGATGGCTATG | + |
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Preference number: 5 (lower is better) Translates to: LSVSDPAEALYRRCF*AVMLAAKLIGRMAM Trigger: CATAGCCATCCTGCCTATCAGTTTGGCTGCCAGCATTACAGCCCAGAAGCATCGACGATACAAAGCCTCAGCGGGGTCAGAGACACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS TCA 90 bp | CAAAATAGACACCCACTACTATCTGGGAAGCAAAGCGAAGGAGACTaGGAGGTGGTCTCTCCTCTTCCGGCCTCTGTTTCCAACTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: QNRHPLLSGKQSEGD*EVVSPLPASVSNSG Trigger: TCCAGAGTTGGAAACAGAGGCCGGAAGAGGAGAGACCACCTCTCAGTCTCCTTCGCTTTGCTTCCCAGATAGTAGTGGGTGTCTATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS GCA 90 bp | GACTTTCACCAGGTCCCGGTAACTCCGATGTATTTCTTCATTAGTTaGTCCTTCTGGGACGCCCAGAACCTGGTGAGCCAGCTGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: DFHQVPVTPMYFFIS*SFWDAQNLVSQLKF Trigger: AAACTTCAGCTGGCTCACCAGGTTCTGGGCGTCCCAGAAGGAGCAACTAATGAAGAAATACATCGGAGTTACCGGGACCTGGTGAAAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS GCA 90 bp | AAGTGGGAAAAAGCTGAACCAACTCAAGAAGGAACCCAGGGTTTCTaGCACGTAGTTAATGGTGGCAGCTGTGTTGTACATCGTACTGTA | + |
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Preference number: 5 (lower is better) Translates to: KWEKAEPTQEGTQGF*HVVNGGSCVVHRTV Trigger: TACAGTACGATGTACAACACAGCTGCCACCATTAACTACGTGGCAGAAACCCTGGGTTCCTTCTTGAGTTGGTTCAGCTTTTTCCCACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CCA 72 bp | CCACCACCTCCCAGGGTGAGCATCCAGAGCAGGGCATaGCTGTCCCTTCCCAGGTACAGGTGGTGGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PPPPRVSIQSRA*LSLPRYRWWSP Trigger: TGGGCTCCACCACCTGTACCTGGGAAGGGACAGCCATGCCCTGCTCTGGATGCTCACCCTGGGAGGTGGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS TCA 72 bp | CTGTGTTGTACATCGTACTGTAGGCCAGAGGGCCGGTaGAGGCGAGGTAAGCCAAGCCCACGCGGTAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LCCTSYCRPEGR*RRGKPSPRGRA Trigger: GGCTCTACCGCGTGGGCTTGGCTTACCTCGCCTTCACCGGCCCTCTGGCCTACAGTACGATGTACAACACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CAA 90 bp | TCTCTCCTCTTCCGGCCTCTGTTTCCAACTCTGGACTCTGTTGGCTaGAGCCACAAAGCTCGGGAGCTTCCAGAATTCCCAGAGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SLLFRPLFPTLDSVG*SHKARELPEFPEPA Trigger: GGCTGGCTCTGGGAATTCTGGAAGCTCCCGAGCTTTGTGGCTCAAGCCAACAGAGTCCAGAGTTGGAAACAGAGGCCGGAAGAGGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS TCA 72 bp | CACCCACTACTATCTGGGAAGCAAAGCGAAGGAGACTaGGAGGTGGTCTCTCCTCTTCCGGCCTCTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: HPLLSGKQSEGD*EVVSPLPASVS Trigger: GGAAACAGAGGCCGGAAGAGGAGAGACCACCTCTCAGTCTCCTTCGCTTTGCTTCCCAGATAGTAGTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CCA 72 bp | TCTGACCCCGCTGAGGCTTTGTATCGTCGATGCTTCTaGGCTGTAATGCTGGCAGCCAAACTGATAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SDPAEALYRRCF*AVMLAAKLIGR Trigger: CCTGCCTATCAGTTTGGCTGCCAGCATTACAGCCCAGAAGCATCGACGATACAAAGCCTCAGCGGGGTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CAA 72 bp | AGCCGCACACTAAGTGTCTCTGACCCCGCTGAGGCTTaGTATCGTCGATGCTTCTGGGCTGTAATGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SRTLSVSDPAEA*YRRCFWAVMLA Trigger: TGCCAGCATTACAGCCCAGAAGCATCGACGATACAAAGCCTCAGCGGGGTCAGAGACACTTAGTGTGCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS GCA 72 bp | CAGGTCCCGGTAACTCCGATGTATTTCTTCATTAGTTaGTCCTTCTGGGACGCCCAGAACCTGGTGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: QVPVTPMYFFIS*SFWDAQNLVSQ Trigger: CTGGCTCACCAGGTTCTGGGCGTCCCAGAAGGAGCAACTAATGAAGAAATACATCGGAGTTACCGGGACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CCA 72 bp | CCTCTTCCGGCCTCTGTTTCCAACTCTGGACTCTGTTaGCTTGAGCCACAAAGCTCGGGAGCTTCCAGAATT | + |
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Preference number: 6 (lower is better) Translates to: PLPASVSNSGLC*LEPQSSGASRI Trigger: AATTCTGGAAGCTCCCGAGCTTTGTGGCTCAAGCCAACAGAGTCCAGAGTTGGAAACAGAGGCCGGAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CAA 72 bp | TTCCGGCCTCTGTTTCCAACTCTGGACTCTGTTGGCTaGAGCCACAAAGCTCGGGAGCTTCCAGAATTCCCA | + |
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Preference number: 6 (lower is better) Translates to: FRPLFPTLDSVG*SHKARELPEFP Trigger: TGGGAATTCTGGAAGCTCCCGAGCTTTGTGGCTCAAGCCAACAGAGTCCAGAGTTGGAAACAGAGGCCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS GCA 72 bp | AGTGTCTCTGACCCCGCTGAGGCTTTGTATCGTCGATaGTTCTGGGCTGTAATGCTGGCAGCCAAACTGATA | + |
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Preference number: 6 (lower is better) Translates to: SVSDPAEALYRR*FWAVMLAAKLI Trigger: TATCAGTTTGGCTGCCAGCATTACAGCCCAGAAGCATCGACGATACAAAGCCTCAGCGGGGTCAGAGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CCA 72 bp | AAGGCCGCTCCTAAGGTATTCTTAAAGTCTGAGGTCTaGTTACCAACAGCAGCTACCAGCAAGACCCCTAAG | + |
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Preference number: 6 (lower is better) Translates to: KAAPKVFLKSEV*LPTAATSKTPK Trigger: CTTAGGGGTCTTGCTGGTAGCTGCTGTTGGTAACCAGACCTCAGACTTTAAGAATACCTTAGGAGCGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS CCA 72 bp | GTAACTCCGATGTATTTCTTCATTAGTTGCTCCTTCTaGGACGCCCAGAACCTGGTGAGCCAGCTGAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: VTPMYFFISCSF*DAQNLVSQLKF Trigger: AAACTTCAGCTGGCTCACCAGGTTCTGGGCGTCCCAGAAGGAGCAACTAATGAAGAAATACATCGGAGTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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| CDS GCA 72 bp | AAAGCTGAACCAACTCAAGAAGGAACCCAGGGTTTCTaGCACGTAGTTAATGGTGGCAGCTGTGTTGTACAT | + |
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Preference number: 6 (lower is better) Translates to: KAEPTQEGTQGF*HVVNGGSCVVH Trigger: ATGTACAACACAGCTGCCACCATTAACTACGTGGCAGAAACCCTGGGTTCCTTCTTGAGTTGGTTCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061295.7 |
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