RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAJC21 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044224

Ensembl transcript IDs: ENSMUST00000136591.8

Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CTCGCCTTCTCTGCGTTCTGCTCCTCCACAAGCTTCCGATGGGCCTaGACTCTCTTATCTCGTTTACGAATGAAGGCTACCAGCTGGCGC +
Preference number: 5 (lower is better)
Translates to: LAFSAFCSSTSFRWA*TLLSRLRMKATSWR
Trigger: GCGCCAGCTGGTAGCCTTCATTCGTAAACGAGATAAGAGAGTGCAGGCCCATCGGAAGCTTGTGGAGGAGCAGAACGCAGAGAAGGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CCA 90 bp GCCTTCCTCGCCTTCTCTGCGTTCTGCTCCTCCACAAGCTTCCGATaGGCCTGCACTCTCTTATCTCGTTTACGAATGAAGGCTACCAGC +
Preference number: 5 (lower is better)
Translates to: AFLAFSAFCSSTSFR*ACTLLSRLRMKATS
Trigger: GCTGGTAGCCTTCATTCGTAAACGAGATAAGAGAGTGCAGGCCCATCGGAAGCTTGTGGAGGAGCAGAACGCAGAGAAGGCGAGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS GCA 90 bp ATCTCCTGGAGCTCCTTCTCCAAATTGGCCATGGTCATCCAGCTCTaGTCTCTGTACTGCTCTGCCAGCTTGGCTTGCTTCAGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: ISWSSFSKLAMVIQL*SLYCSASLACFSFC
Trigger: GCAGAAGCTGAAGCAAGCCAAGCTGGCAGAGCAGTACAGAGAGCAGAGCTGGATGACCATGGCCAATTTGGAGAAGGAGCTCCAGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CCA 90 bp CGTACCTTGCTTCCATCTCCTGGAGCTCCTTCTCCAAATTGGCCATaGTCATCCAGCTCTGCTCTCTGTACTGCTCTGCCAGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: RTLLPSPGAPSPNWP*SSSSALCTALPAWL
Trigger: AAGCCAAGCTGGCAGAGCAGTACAGAGAGCAGAGCTGGATGACCATGGCCAATTTGGAGAAGGAGCTCCAGGAGATGGAAGCAAGGTACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CCA 90 bp CCTTCTCGTACCTTGCTTCCATCTCCTGGAGCTCCTTCTCCAAATTaGCCATGGTCATCCAGCTCTGCTCTCTGTACTGCTCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PSRTLLPSPGAPSPN*PWSSSSALCTALPA
Trigger: AGCTGGCAGAGCAGTACAGAGAGCAGAGCTGGATGACCATGGCCAATTTGGAGAAGGAGCTCCAGGAGATGGAAGCAAGGTACGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS TCA 90 bp TCAGCCTCCTCGCTGTCCTTGCCATCCAATCCGTTTCTGGGCTCCTaGTCCTCCACTTCGTTTTCATCTGATCCATCTCCAAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: SASSLSLPSNPFLGS*SSTSFSSDPSPNSF
Trigger: GAAGGAGTTTGGAGATGGATCAGATGAAAACGAAGTGGAGGATCAGGAGCCCAGAAACGGATTGGATGGCAAGGACAGCGAGGAGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CCA 90 bp TCTGATCCATCTCCAAACTCCTTCTCGTACCTTGCTTCCATCTCCTaGAGCTCCTTCTCCAAATTGGCCATGGTCATCCAGCTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: SDPSPNSFSYLASIS*SSFSKLAMVIQLCS
Trigger: AGAGCAGAGCTGGATGACCATGGCCAATTTGGAGAAGGAGCTCCAGGAGATGGAAGCAAGGTACGAGAAGGAGTTTGGAGATGGATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS TCA 90 bp CCACAAGCTTCCGATGGGCCTGCACTCTCTTATCTCGTTTACGAATaGAGGCTACCAGCTGGCGCACCAGTTCATTTTTCTCTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: PQASDGPALSYLVYE*RLPAGAPVHFSLSL
Trigger: CAAGGAAAGAGAAAAATGAACTGGTGCGCCAGCTGGTAGCCTTCATTCGTAAACGAGATAAGAGAGTGCAGGCCCATCGGAAGCTTGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS TCA 90 bp CCTTTAAGTAAGGCCTCTCGGTGGTTATCGTACCACGCTCTTTCCTaGGGGTCACTTAAGACGTCATATGCAGCTTGGATTAATTTAAAC +
Preference number: 5 (lower is better)
Translates to: PLSKASRWLSYHALS*GSLKTSYAAWINLN
Trigger: GTTTAAATTAATCCAAGCTGCATATGACGTCTTAAGTGACCCTCAGGAAAGAGCGTGGTACGATAACCACCGAGAGGCCTTACTTAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CAA 90 bp TCCTTCTCGTACCTTGCTTCCATCTCCTGGAGCTCCTTCTCCAAATaGGCCATGGTCATCCAGCTCTGCTCTCTGTACTGCTCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: SFSYLASISWSSFSK*AMVIQLCSLYCSAS
Trigger: GCTGGCAGAGCAGTACAGAGAGCAGAGCTGGATGACCATGGCCAATTTGGAGAAGGAGCTCCAGGAGATGGAAGCAAGGTACGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS GCA 72 bp AGCTCCTTCTCCAAATTGGCCATGGTCATCCAGCTCTaGTCTCTGTACTGCTCTGCCAGCTTGGCTTGCTTC +
Preference number: 6 (lower is better)
Translates to: SSFSKLAMVIQL*SLYCSASLACF
Trigger: GAAGCAAGCCAAGCTGGCAGAGCAGTACAGAGAGCAGAGCTGGATGACCATGGCCAATTTGGAGAAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CCA 72 bp CTTCCATCTCCTGGAGCTCCTTCTCCAAATTGGCCATaGTCATCCAGCTCTGCTCTCTGTACTGCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: LPSPGAPSPNWP*SSSSALCTALP
Trigger: TGGCAGAGCAGTACAGAGAGCAGAGCTGGATGACCATGGCCAATTTGGAGAAGGAGCTCCAGGAGATGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CCA 72 bp CAGCCTCCTCGCTGTCCTTGCCATCCAATCCGTTTCTaGGCTCCTGATCCTCCACTTCGTTTTCATCTGATC +
Preference number: 6 (lower is better)
Translates to: QPPRCPCHPIRF*APDPPLRFHLI
Trigger: GATCAGATGAAAACGAAGTGGAGGATCAGGAGCCCAGAAACGGATTGGATGGCAAGGACAGCGAGGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS GCA 72 bp TCTGCGTTCTGCTCCTCCACAAGCTTCCGATGGGCCTaGACTCTCTTATCTCGTTTACGAATGAAGGCTACC +
Preference number: 6 (lower is better)
Translates to: SAFCSSTSFRWA*TLLSRLRMKAT
Trigger: GGTAGCCTTCATTCGTAAACGAGATAAGAGAGTGCAGGCCCATCGGAAGCTTGTGGAGGAGCAGAACGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CCA 72 bp GCCTTCTCTGCGTTCTGCTCCTCCACAAGCTTCCGATaGGCCTGCACTCTCTTATCTCGTTTACGAATGAAG +
Preference number: 6 (lower is better)
Translates to: AFSAFCSSTSFR*ACTLLSRLRMK
Trigger: CTTCATTCGTAAACGAGATAAGAGAGTGCAGGCCCATCGGAAGCTTGTGGAGGAGCAGAACGCAGAGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CAA 90 bp AAGGGTGGACCACCGTGTCATAGTCGCTCTGGGAGTCGCCGAAGGTaGGAAAATCCTCAACATCTCCCTCTGACATACACTCCAGTTCTT +
Preference number: 6 (lower is better)
Translates to: KGGPPCHSRSGSRRR*ENPQHLPLTYTPVL
Trigger: AAGAACTGGAGTGTATGTCAGAGGGAGATGTTGAGGATTTTCCAACCTTCGGCGACTCCCAGAGCGACTATGACACGGTGGTCCACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS TCA 72 bp TCGCTGTCCTTGCCATCCAATCCGTTTCTGGGCTCCTaGTCCTCCACTTCGTTTTCATCTGATCCATCTCCA +
Preference number: 6 (lower is better)
Translates to: SLSLPSNPFLGS*SSTSFSSDPSP
Trigger: TGGAGATGGATCAGATGAAAACGAAGTGGAGGATCAGGAGCCCAGAAACGGATTGGATGGCAAGGACAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CCA 72 bp TCTCCAAACTCCTTCTCGTACCTTGCTTCCATCTCCTaGAGCTCCTTCTCCAAATTGGCCATGGTCATCCAG +
Preference number: 6 (lower is better)
Translates to: SPNSFSYLASIS*SSFSKLAMVIQ
Trigger: CTGGATGACCATGGCCAATTTGGAGAAGGAGCTCCAGGAGATGGAAGCAAGGTACGAGAAGGAGTTTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS TCA 72 bp AAGGCCTCTCGGTGGTTATCGTACCACGCTCTTTCCTaGGGGTCACTTAAGACGTCATATGCAGCTTGGATT +
Preference number: 6 (lower is better)
Translates to: KASRWLSYHALS*GSLKTSYAAWI
Trigger: AATCCAAGCTGCATATGACGTCTTAAGTGACCCTCAGGAAAGAGCGTGGTACGATAACCACCGAGAGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS TCA 72 bp TCCGATGGGCCTGCACTCTCTTATCTCGTTTACGAATaGAGGCTACCAGCTGGCGCACCAGTTCATTTTTCT +
Preference number: 6 (lower is better)
Translates to: SDGPALSYLVYE*RLPAGAPVHFS
Trigger: AGAAAAATGAACTGGTGCGCCAGCTGGTAGCCTTCATTCGTAAACGAGATAAGAGAGTGCAGGCCCATCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS TCA 72 bp GTCGCCGAAGGTTGGAAAATCCTCAACATCTCCCTCTaGCATACACTCCAGTTCTTCTTTTGCAATCAGCTC +
Preference number: 6 (lower is better)
Translates to: VAEGWKILNISL*HTLQFFFCNQL
Trigger: GAGCTGATTGCAAAAGAAGAACTGGAGTGTATGTCAGAGGGAGATGTTGAGGATTTTCCAACCTTCGGCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CAA 90 bp GAAAATCCTCAACATCTCCCTCTGACATACACTCCAGTTCTTCTTTaGCAATCAGCTCAAAGACAACACGATACACTGCATAGAACCCCC +
Preference number: 6 (lower is better)
Translates to: ENPQHLPLTYTPVLL*QSAQRQHDTLHRTP
Trigger: GGGGGTTCTATGCAGTGTATCGTGTTGTCTTTGAGCTGATTGCAAAAGAAGAACTGGAGTGTATGTCAGAGGGAGATGTTGAGGATTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CAA 72 bp CAACATCTCCCTCTGACATACACTCCAGTTCTTCTTTaGCAATCAGCTCAAAGACAACACGATACACTGCAT +
Preference number: 6 (lower is better)
Translates to: QHLPLTYTPVLL*QSAQRQHDTLH
Trigger: ATGCAGTGTATCGTGTTGTCTTTGAGCTGATTGCAAAAGAAGAACTGGAGTGTATGTCAGAGGGAGATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS CAA 72 bp GCTGTTTTAACAAGGCAACCATTTCCCGATGTTTCTTaGACTTCTCGTGATTCTTCATGGCCTTTTCTGTCT +
Preference number: 6 (lower is better)
Translates to: AVLTRQPFPDVS*TSRDSSWPFLS
Trigger: AGACAGAAAAGGCCATGAAGAATCACGAGAAGTCAAAGAAACATCGGGAAATGGTTGCCTTGTTAAAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS TCA 72 bp TCCTCAGAATTGGCATTCAATACATTTTCATCCATTTaGACTCCTGAAAACTGTTCTTCCTCCTCCTCCAAC +
Preference number: 6 (lower is better)
Translates to: SSELAFNTFSSI*TPENCSSSSSN
Trigger: GTTGGAGGAGGAGGAAGAACAGTTTTCAGGAGTTCAAATGGATGAAAATGTATTGAATGCCAATTCTGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8
CDS GCA 72 bp CTTAAGACGTCATATGCAGCTTGGATTAATTTAAACTaGTCAGCTGCTTCTGCGGCATTGTCCAGATTTTTA +
Preference number: 6 (lower is better)
Translates to: LKTSYAAWINLN*SAASAALSRFL
Trigger: TAAAAATCTGGACAATGCCGCAGAAGCAGCTGAGCAGTTTAAATTAATCCAAGCTGCATATGACGTCTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000136591.8