Pregenerated sensors for DNAJC18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024350Ensembl transcript IDs: ENSMUST00000025208.7, ENSMUST00000235930.2, ENSMUST00000237995.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTGCCTCTGGCAGCGCCAGTTCAGAGGAGTGAGGATGGAGACTTaGGGATGGAGAATTCAGCAGCTGGCTGGATCGGGCTCCAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: RCLWQRQFRGVRMET*GWRIQQLAGSGSSR Trigger: CCTGCTGGAGCCCGATCCAGCCAGCTGCTGAATTCTCCATCCGCAAGTCTCCATCCTCACTCCTCTGAACTGGCGCTGCCAGAGGCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | CAGGTGCAGGCAATGCCTGTGGAGGCCAAAGAGGGTCAGGTCCCCTaGAACTGGAGTTACAGAATGTTGGGAGCCACCAGGTGGGTGCGG | + |
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Preference number: 1 (lower is better) Translates to: QVQAMPVEAKEGQVP*NWSYRMLGATRWVR Trigger: CCGCACCCACCTGGTGGCTCCCAACATTCTGTAACTCCAGTTCCAGGGGACCTGACCCTCTTTGGCCTCCACAGGCATTGCCTGCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR GCA 90 bp | TGTATGTGGGTGTTACACTGCCTGCATGTGTGTCCGTGCACCAGGTaGAGGCAATGCCTGTGGAGGCCAAAGAGGGTCAGGTCCCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: CMWVLHCLHVCPCTR*RQCLWRPKRVRSPG Trigger: TCCAGGGGACCTGACCCTCTTTGGCCTCCACAGGCATTGCCTGCACCTGGTGCACGGACACACATGCAGGCAGTGTAACACCCACATACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR GCA 90 bp | GTGGTGAGGGCCATTTGCAACAGGAACCTGCTGGGATTCCCAAGGTaGCTCTGGCAGCGCCAGTTCAGAGGAGTGAGGATGGAGACTTGC | + |
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Preference number: 1 (lower is better) Translates to: VVRAICNRNLLGFPR*LWQRQFRGVRMETC Trigger: GCAAGTCTCCATCCTCACTCCTCTGAACTGGCGCTGCCAGAGGCACCTTGGGAATCCCAGCAGGTTCCTGTTGCAAATGGCCCTCACCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | CAGGCAATGCCTGTGGAGGCCAAAGAGGGTCAGGTCCCCTGGAACTaGAGTTACAGAATGTTGGGAGCCACCAGGTGGGTGCGGGGAATT | + |
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Preference number: 1 (lower is better) Translates to: QAMPVEAKEGQVPWN*SYRMLGATRWVRGI Trigger: AATTCCCCGCACCCACCTGGTGGCTCCCAACATTCTGTAACTCCAGTTCCAGGGGACCTGACCCTCTTTGGCCTCCACAGGCATTGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | AGGGCCATTTGCAACAGGAACCTGCTGGGATTCCCAAGGTGCCTCTaGCAGCGCCAGTTCAGAGGAGTGAGGATGGAGACTTGCGGATGG | + |
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Preference number: 1 (lower is better) Translates to: RAICNRNLLGFPRCL*QRQFRGVRMETCGW Trigger: CCATCCGCAAGTCTCCATCCTCACTCCTCTGAACTGGCGCTGCCAGAGGCACCTTGGGAATCCCAGCAGGTTCCTGTTGCAAATGGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | AGGCCAAAGAGGGTCAGGTCCCCTGGAACTGGAGTTACAGAATGTTaGGAGCCACCAGGTGGGTGCGGGGAATTGAACCTGAGTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: RPKRVRSPGTGVTEC*EPPGGCGELNLSPL Trigger: CAGAGGACTCAGGTTCAATTCCCCGCACCCACCTGGTGGCTCCCAACATTCTGTAACTCCAGTTCCAGGGGACCTGACCCTCTTTGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR TCA 90 bp | CAGCCAGACAAAATGGCTGCTAACTCTGAGCCTCCCATGCCACGGTaGCAGACTCTTCCCTCTGTGTCTCTGTGCCTGTGTCTCCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: QPDKMAANSEPPMPR*QTLPSVSLCLCLLS Trigger: GGAGAGGAGACACAGGCACAGAGACACAGAGGGAAGAGTCTGTCACCGTGGCATGGGAGGCTCAGAGTTAGCAGCCATTTTGTCTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR GCA 90 bp | TCCCCTGGAACTGGAGTTACAGAATGTTGGGAGCCACCAGGTGGGTaGGGGGAATTGAACCTGAGTCCTCTGGAAGAGAAGCCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SPGTGVTECWEPPGG*GELNLSPLEEKPVL Trigger: GAGCACTGGCTTCTCTTCCAGAGGACTCAGGTTCAATTCCCCGCACCCACCTGGTGGCTCCCAACATTCTGTAACTCCAGTTCCAGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | CAGGTCCCCTGGAACTGGAGTTACAGAATGTTGGGAGCCACCAGGTaGGTGCGGGGAATTGAACCTGAGTCCTCTGGAAGAGAAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: QVPWNWSYRMLGATR*VRGIEPESSGREAS Trigger: ACTGGCTTCTCTTCCAGAGGACTCAGGTTCAATTCCCCGCACCCACCTGGTGGCTCCCAACATTCTGTAACTCCAGTTCCAGGGGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR TCA 90 bp | AGATTTAACGCCAGCCCCTGGGAGGAGCCGTGCATGCAGAGACAATaGGTTGGTGGTGAGGGCCATTTGCAACAGGAACCTGCTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: RFNASPWEEPCMQRQ*VGGEGHLQQEPAGI Trigger: AATCCCAGCAGGTTCCTGTTGCAAATGGCCCTCACCACCAACTCATTGTCTCTGCATGCACGGCTCCTCCCAGGGGCTGGCGTTAAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR GCA 90 bp | GAGCCAGGCCTGGGGAAGGACTGGAGGGGACAAGTCTCCAATCACTaGAGCTCTGCCCAACAAAGTCAGCAGAGAGTAAAGTGCTCATAT | + |
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Preference number: 1 (lower is better) Translates to: EPGLGKDWRGQVSNH*SSAQQSQQRVKCSY Trigger: ATATGAGCACTTTACTCTCTGCTGACTTTGTTGGGCAGAGCTGCAGTGATTGGAGACTTGTCCCCTCCAGTCCTTCCCCAGGCCTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | GCTTCCACTCCTGTGCGAGCCTCACTCCCGTCAGTCTCCATTCTGTaGTCTCAATCTGTGAGACACACACACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: ASTPVRASLPSVSIL*SQSVRHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCACAGATTGAGACCACAGAATGGAGACTGACGGGAGTGAGGCTCGCACAGGAGTGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | AGGATTTTCTGTCTCCCTCTCACTAAAGAAAGCACCTCTCGGGAATaGCAGCTTCCACTCCTGTGCGAGCCTCACTCCCGTCAGTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: RIFCLPLTKESTSRE*QLPLLCEPHSRQSP Trigger: TGGAGACTGACGGGAGTGAGGCTCGCACAGGAGTGGAAGCTGCCATTCCCGAGAGGTGCTTTCTTTAGTGAGAGGGAGACAGAAAATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | ATGCTATTTCCTTACCGTAGGTCGCTTCTCCCAAGCTGTGAGGCCTaGCGCCGGTCAGTGAAGCGGAGATGTTTTCCTGGCTTGAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: MLFPYRRSLLPSCEA*RRSVKRRCFPGLSD Trigger: ATCACTCAAGCCAGGAAAACATCTCCGCTTCACTGACCGGCGCCAGGCCTCACAGCTTGGGAGAAGCGACCTACGGTAAGGAAATAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | AGACTCTTCCCTCTGTGTCTCTGTGCCTGTGTCTCCTCTCCAGTTTaGCTCCTGCCCTTCTGTGCATTCCTGTGCTCATCATACAACCGT | + |
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Preference number: 1 (lower is better) Translates to: RLFPLCLCACVSSPV*LLPFCAFLCSSYNR Trigger: ACGGTTGTATGATGAGCACAGGAATGCACAGAAGGGCAGGAGCCAAACTGGAGAGGAGACACAGGCACAGAGACACAGAGGGAAGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | GGGGCGGAGGTGTCCTGGAGGATGGGTAAGTCTGCTTTGCCAAACTaGCTAGAATCACCCGAGAAAAAGGATGACTTCTCACACACAGTC | + |
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Preference number: 1 (lower is better) Translates to: GAEVSWRMGKSALPN*LESPEKKDDFSHTV Trigger: GACTGTGTGTGAGAAGTCATCCTTTTTCTCGGGTGATTCTAGCCAGTTTGGCAAAGCAGACTTACCCATCCTCCAGGACACCTCCGCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR GCA 90 bp | CCTGGGGAAGGACTGGAGGGGACAAGTCTCCAATCACTGCAGCTCTaGCCAACAAAGTCAGCAGAGAGTAAAGTGCTCATATCTCCTAAC | + |
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Preference number: 1 (lower is better) Translates to: PGEGLEGTSLQSLQL*PTKSAESKVLISPN Trigger: GTTAGGAGATATGAGCACTTTACTCTCTGCTGACTTTGTTGGGCAGAGCTGCAGTGATTGGAGACTTGTCCCCTCCAGTCCTTCCCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | AAATCAGGGGAGGTGGTGACTTTACAGCAGGAGAGGTATAATTCTTaGCAGACACCACCAATACTCTGCAGTGCACTGGCTAAGCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: KSGEVVTLQQERYNS*QTPPILCSALAKPR Trigger: TCTAGGCTTAGCCAGTGCACTGCAGAGTATTGGTGGTGTCTGCCAAGAATTATACCTCTCCTGCTGTAAAGTCACCACCTCCCCTGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR GCA 90 bp | TCTCTGTGCCTGTGTCTCCTCTCCAGTTTGGCTCCTGCCCTTCTGTaGATTCCTGTGCTCATCATACAACCGTTAACACTAAATGATGAT | + |
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Preference number: 1 (lower is better) Translates to: SLCLCLLSSLAPALL*IPVLIIQPLTLNDD Trigger: ATCATCATTTAGTGTTAACGGTTGTATGATGAGCACAGGAATGCACAGAAGGGCAGGAGCCAAACTGGAGAGGAGACACAGGCACAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | GAGGTATCAACAGCACAGGCCCAAACGTCAAGGTGTTTAGTAACTTaGCCCCTTCCCAAAATAAAGGGATTAGGACACCAATCTAACACC | + |
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Preference number: 1 (lower is better) Translates to: EVSTAQAQTSRCLVT*PLPKIKGLGHQSNT Trigger: GGTGTTAGATTGGTGTCCTAATCCCTTTATTTTGGGAAGGGGCCAAGTTACTAAACACCTTGACGTTTGGGCCTGTGCTGTTGATACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR GCA 90 bp | GTTAGTGTTGTCTCTGGTTATCATCACCTCACAGATAACTCTCAGTaGCAGGAAATCTACAGAATTAGTAAAAGTCGTCTAGTGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: VSVVSGYHHLTDNSQ*QEIYRISKSRLVGG Trigger: CCCTCCCACTAGACGACTTTTACTAATTCTGTAGATTTCCTGGCACTGAGAGTTATCTGTGAGGTGATGATAACCAGAGACAACACTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CCA 90 bp | CTCAAATCAGGCAGCTTTGCTTATGGTCCTAACTCAACAGAGATTTaGATAACACTGAACTGTTGGCTACGTAGTTCAATTTCTCTACAG | + |
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Preference number: 1 (lower is better) Translates to: LKSGSFAYGPNSTEI*ITLNCWLRSSISLQ Trigger: CTGTAGAGAAATTGAACTACGTAGCCAACAGTTCAGTGTTATCCAAATCTCTGTTGAGTTAGGACCATAAGCAAAGCTGCCTGATTTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR TCA 90 bp | CTTCTAAACGCCCAGCAGGGAAGCAGCCCTGTAGGGACTCAGGATGGCCTGGAATGCTGGACTGTTCACTaGGCTGTCTCCAAGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LLNAQQGSSPVGTQDGLECWTVH*AVSKPS Trigger: GCTGGGCTTGGAGACAGCTCAGTGAACAGTCCAGCA...TTCCAGGCCATCCTGAGTCCCTACAGGGCTGCTTCCCTGCTGGGCGTTTAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CAA 90 bp | GAGGCCAAAGAGGGTCAGGTCCCCTGGAACTGGAGTTACAGAATGTaGGGAGCCACCAGGTGGGTGCGGGGAATTGAACCTGAGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EAKEGQVPWNWSYRM*GATRWVRGIEPESS Trigger: AGAGGACTCAGGTTCAATTCCCCGCACCCACCTGGTGGCTCCCAACATTCTGTAACTCCAGTTCCAGGGGACCTGACCCTCTTTGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CAA 90 bp | TTAACGCCAGCCCCTGGGAGGAGCCGTGCATGCAGAGACAATGAGTaGGTGGTGAGGGCCATTTGCAACAGGAACCTGCTGGGATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LTPAPGRSRACRDNE*VVRAICNRNLLGFP Trigger: TGGGAATCCCAGCAGGTTCCTGTTGCAAATGGCCCTCACCACCAACTCATTGTCTCTGCATGCACGGCTCCTCCCAGGGGCTGGCGTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR GCA 90 bp | GCAATGCCTGTGGAGGCCAAAGAGGGTCAGGTCCCCTGGAACTGGAGTTACAGAAGGCAGGAGAATCACTaGAGACTCAGGCCAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: AMPVEAKEGQVPWNWSYRRQENH*RLRPAW Trigger: CCAAGCTGGCCTGAGTCTGCAGTGATTCTCCTGCCT...TCTGTAACTCCAGTTCCAGGGGACCTGACCCTCTTTGGCCTCCACAGGCATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGCAGCTGGCTGGATCGGGCTCCAGCAGGGTTCTGCACTTCTTGTCCTTTCTGTCTCTGGAATGCCCTaGCCTACTTCACAGAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SAAGWIGLQQGSALLVLSVSGMP*PTSQRS Trigger: ACTCCTCTGTGAAGTAGGTCAGGGCATTCCAGAGAC...AGAAAGGACAAGAAGTGCAGAACCCTGCTGGAGCCCGATCCAGCCAGCTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGCACAGGCCCAAACGTCAAGGTGTTTAGTAACTTGGCCCCTTCCCAAAATAGCTTCTCCCAAGCTGTaGGGCCTGGCGCCGGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: TAQAQTSRCLVTWPLPKIASPKL*GLAPVS Trigger: ACTGACCGGCGCCAGGCCTCACAGCTTGGGAGAAGC...TATTTTGGGAAGGGGCCAAGTTACTAAACACCTTGACGTTTGGGCCTGTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CAA 90 bp | CAGACTCTTCCCTCTGTGTCTCTGTGCCTGTGTCTCCTCTCCAGTTaGGCTCCTGCCCTTCTGTGCATTCCTGTGCTCATCATACAACCG | + |
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Preference number: 2 (lower is better) Translates to: QTLPSVSLCLCLLSS*APALLCIPVLIIQP Trigger: CGGTTGTATGATGAGCACAGGAATGCACAGAAGGGCAGGAGCCAAACTGGAGAGGAGACACAGGCACAGAGACACAGAGGGAAGAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR GCA 90 bp | TGGCTCACAACTGAAATCACAGCTCTCAAGAGGCTCAGGCAGGAGAATCACTGCCAGACTGGTCTGGGCTaGAGAGTGAGCCCTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: WLTTEITALKRLRQENHCQTGLG*RVSPSL Trigger: GAGAGAAGGGCTCACTCTGCAGCCCAGACCAGTCTG...GCAGTGATTCTCCTGCCTGAGCCTCTTGAGAGCTGTGATTTCAGTTGTGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR GCA 90 bp | ACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGCCACTGCATGTGTGTCCGTaGACCAGGTGCAGGCAATGC | + |
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Preference number: 2 (lower is better) Translates to: THTHTQSKNSPSRELTVPLHVCP*TRCRQC Trigger: GCATTGCCTGCACCTGGTGCACGGACACACATGCAG...TGGCACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGGGCCTGGGGAAGGACTaGAGGGGACAAGTCTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTQSKNSPSRELTVGLGKD*RGQVSN Trigger: ATTGGAGACTTGTCCCCTCCAGTCCTTCCCCAGGCC...CACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR CCA 90 bp | TACAGCAGGAGAGGTATAATTCTTGGCAGACACCACCAATACTCTGCAGTGCACCCAACTGTTCTGCCCTaGGAGCCAGGCCTGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: YSRRGIILGRHHQYSAVHPTVLP*EPGLGK Trigger: CTTCCCCAGGCCTGGCTCCCAGGGCAGAACAGTTGG...GTGCACTGCAGAGTATTGGTGGTGTCTGCCAAGAATTATACCTCTCCTGCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAGCTGGCTGGATCGGGCTCCAGCAGGGTTCTGCACTTCTTGTCCTTTCTAGGTGTCCTGGAGGATaGGTAAGTCTGCTTTGCCAA | + |
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Preference number: 2 (lower is better) Translates to: SAAGWIGLQQGSALLVLSRCPGG*VSLLCQ Trigger: TTGGCAAAGCAGACTTACCCATCCTCCAGGACACCT...AGAAAGGACAAGAAGTGCAGAACCCTGCTGGAGCCCGATCCAGCCAGCTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR TCA 90 bp | ACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGCCATGGCTGGTCTGGAACTaGTATGTAACCCAGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: THTHTQSKNSPSRELTVPWLVWN*YVTQAG Trigger: GCCAGCCTGGGTTACATATCAGTTCCAGACCAGCCA...TGGCACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCTAACTCTGAGCCTCCCATGCCACGGTGACAGACTCTTCCCTCTGTGTCTCAAGGAGCCTCACCTATaGTGGCTCACAACTGAAATC | + |
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Preference number: 2 (lower is better) Translates to: LLTLSLPCHGDRLFPLCLKEPHL*WLTTEI Trigger: GATTTCAGTTGTGAGCCACCATAGGTGAGGCTCCTT...GAGACACAGAGGGAAGAGTCTGTCACCGTGGCATGGGAGGCTCAGAGTTAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCAGGGTTCTGCACTTCTTGTCCTTTCTAACAGTTCCCATAAGCATGCAGGGGGCGGAGGTGTCCTaGAGGATGGGTAAGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SSRVLHFLSFLTVPISMQGAEVS*RMGKSA Trigger: AGCAGACTTACCCATCCTCCAGGACACCTCCGCCCC...CTGCATGCTTATGGGAACTGTTAGAAAGGACAAGAAGTGCAGAACCCTGCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR GCA 90 bp | GACTCTGGCCCCAGAACATTCCCTTCTCCACCTCCCCAAATGCAAATGTACTCACTCGGTAGGCTAGCATaGACAAAGCCTTGGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: DSGPRTFPSPPPQMQMYSLGRLA*TKPWAQ Trigger: TTGAGCCCAAGGCTTTGTGCATGCTAGCCTACCGAG...TGAGTACATTTGCATTTGGGGAGGTGGAGAAGGGAATGTTCTGGGGCCAGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGCCAGAGGGTCAGGTCCCCTaGAACTGGAGTTACAGAATG | + |
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Preference number: 2 (lower is better) Translates to: THTHTQSKNSPSRELTVPEGQVP*NWSYRM Trigger: CATTCTGTAACTCCAGTTCCAGGGGACCTGACCCTC...TGGCACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCCCTGCGCAGGCCAATGAGCTTGGAAAGCTTTGCACAGTTTTCGAGTTTATAACCCCGCCAAATTaGTCAGCTCCGACTTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: AGPAQANELGKLCTVFEFITPPN*SAPTFA Trigger: AGCAAAAGTCGGAGCTGACCAATTTGGCGGGGTTAT...AAACTCGAAAACTGTGCAAAGCTTTCCAAGCTCATTGGCCTGCGCAGGGCCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000235930.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGGTAGAGGCAGGAGAATCACAAGTCCAATGTCTTGGGAAGTGGTGGCACCAAGTCTCCAATCACTaGAGCTCTGCCCAACAAAGT | + |
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Preference number: 2 (lower is better) Translates to: QEVEAGESQVQCLGKWWHQVSNH*SSAQQS Trigger: ACTTTGTTGGGCAGAGCTGCAGTGATTGGAGACTTG...GTGCCACCACTTCCCAAGACATTGGACTTGTGATTCTCCTGCCTCTACCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR GCA 90 bp | CAGGAGGTAGAGGCAGGAGAATCACAAGTCCAATGTCTTGGGAAGTGGTGGCACAGAATGGCCTGCTTGTaGCTCCTGAGTCCTAAGATT | + |
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Preference number: 2 (lower is better) Translates to: QEVEAGESQVQCLGKWWHRMACL*LLSPKI Trigger: AATCTTAGGACTCAGGAGGCACAAGCAGGCCATTCT...GTGCCACCACTTCCCAAGACATTGGACTTGTGATTCTCCTGCCTCTACCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGGTAGAGGCAGGAGAATCACAAGTCCAATGTCTTGGGAAGTGGTGGCACGAGCCTCACCTATGGTaGCTCACAACTGAAATCACA | + |
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Preference number: 2 (lower is better) Translates to: QEVEAGESQVQCLGKWWHEPHLW*LTTEIT Trigger: TGTGATTTCAGTTGTGAGCCACCATAGGTGAGGCTC...GTGCCACCACTTCCCAAGACATTGGACTTGTGATTCTCCTGCCTCTACCTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGCCACAGGTCCCCTGGAACTaGAGTTACAGAATGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: THTHTQSKNSPSRELTVPQVPWN*SYRMLG Trigger: TCCCAACATTCTGTAACTCCAGTTCCAGGGGACCTG...TGGCACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CAA 90 bp | ATTCAGCAGCTGGCTGGATCGGGCTCCAGCAGGGTTCTGCACTTCTaGTCCTTTCTAACAGTTCCCATAAGCATGCAGAGCAATGCTATT | + |
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Preference number: 2 (lower is better) Translates to: IQQLAGSGSSRVLHF*SFLTVPISMQSNAI Trigger: AATAGCATTGCTCTGCATGCTTATGGGAACTGTTAGAAAGGACAAGAAGTGCAGAACCCTGCTGGAGCCCGATCCAGCCAGCTGCTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTAACAGTTCCCATAAGCATGCAGAGCAATGCTATTTCCTTACCGTAGGTTGTCCGTGCACCAGGTaGAGGCAATGCCTGTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LSNSSHKHAEQCYFLTVGCPCTR*RQCLWR Trigger: CCTCCACAGGCATTGCCTGCACCTGGTGCACGGACA...ACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATGGGAACTGTTAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CAA 90 bp | CCTTCCAACAACTCGTCTGGATGTAATCAATGTAGTCTTTCTCTATaGTCTTCTCCAGGTCACGAAGGGAAGCGCCTCGGTAGGCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PSNNSSGCNQCSLSL*SSPGHEGKRLGRPC Trigger: ACAAGGCCTACCGAGGCGCTTCCCTTCGTGACCTGGAGAAGACAATAGAGAAAGACTACATTGATTACATCCAGACGAGTTGTTGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235930.2 |
||
| 3UTR-3UTR CCA 90 bp | ACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGCCAACTTCACAGAGGAGTTaGGTCCAAACTTTACCATGC | + |
|
Preference number: 2 (lower is better) Translates to: THTHTQSKNSPSRELTVPTSQRS*VQTLPC Trigger: GCATGGTAAAGTTTGGACCCAACTCCTCTGTGAAGT...TGGCACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCATGATAATCTGGGCAGCTCAGGAACTCAAATCTAAATCCGACCTCCACGTCTCCTCTCCAGTTTaGCTCCTGCCCTTCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SFMIIWAAQELKSKSDLHVSSPV*LLPFCA Trigger: TGCACAGAAGGGCAGGAGCCAAACTGGAGAGGAGAC...GTGGAGGTCGGATTTAGATTTGAGTTCCTGAGCTGCCCAGATTATCATGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCTAACAGTTCCCATAAGCATGCAGAGCAATGCTATTTCCTTACCGTAGGTTGCAGGCAATGCCTGTaGAGGCCAAAGAGGGTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LSNSSHKHAEQCYFLTVGCRQCL*RPKRVR Trigger: CCTGACCCTCTTTGGCCTCCACAGGCATTGCCTGCA...ACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATGGGAACTGTTAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTCATGATAATCTGGGCAGCTCAGGAACTCAAATCTAAATCCGACCTCCACCTCCAGTTTGGCTCCTaGCCTTCTGTGCATTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SFMIIWAAQELKSKSDLHLQFGS*PSVHSC Trigger: ACAGGAATGCACAGAAGGGCAGGAGCCAAACTGGAG...GTGGAGGTCGGATTTAGATTTGAGTTCCTGAGCTGCCCAGATTATCATGAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CCA 90 bp | CACACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGGAGAGGTATAATTCTTaGCAGACACCACCAATACTC | + |
|
Preference number: 2 (lower is better) Translates to: HTHTHTQSKNSPSRELTVERYNS*QTPPIL Trigger: GAGTATTGGTGGTGTCTGCCAAGAATTATACCTCTC...CACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR TCA 90 bp | TGGTCTCAATCTGTGAGACACACACACACACACACACACACACACACAGAGCAATCTGCCTCTGAATTCTaGGTGCTGGGTTTAAAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: WSQSVRHTHTHTHTHTEQSASEF*VLGLKL Trigger: TAGCTTTAAACCCAGCACTCAGAATTCAGAGGCAGA...TTGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCACAGATTGAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR GCA 90 bp | ACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGCCACAGCAGAGAGTAAAGTaGTCATATCTCCTAACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: THTHTQSKNSPSRELTVPQQRVK*SYLLTC Trigger: ACAAGTTAGGAGATATGAGCACTTTACTCTCTGCTG...TGGCACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGCATGCAGAGCAATGCTATTTCCTTACCGTAGGTCGCTTCTCCCAAGCTACCACTCATCCTCTCTaGCCAATTCATAAAAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HKHAEQCYFLTVGRFSQATTHPL*PIHKRA Trigger: AGCCCTTTTATGAATTGGCCAGAGAGGATGAGTGGT...AGCTTGGGAGAAGCGACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CCA 90 bp | TGGTCTCAATCTGTGAGACACACACACACACACACACACACACACACAGAGCAATCTGCTTTGCCAAACTaGCTAGAATCACCCGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: WSQSVRHTHTHTHTHTEQSALPN*LESPEK Trigger: TTTCTCGGGTGATTCTAGCCAGTTTGGCAAAGCAGA...TTGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCACAGATTGAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTCATGATAATCTGGGCAGCTCAGGAACTCAAATCTAAATCCGACCTCCACATGGTGGCTCACAACTaGAATCACAGCTCTCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SFMIIWAAQELKSKSDLHMVAHN*NHSSQE Trigger: CTCTTGAGAGCTGTGATTTCAGTTGTGAGCCACCAT...GTGGAGGTCGGATTTAGATTTGAGTTCCTGAGCTGCCCAGATTATCATGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR GCA 90 bp | GACTCTGGCCCCAGAACATTCCCTTCTCCACCTCCCCAAATGCAAATGTACTCAACAGATAACTCTCAGTaGCAGGAAATCTACAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: DSGPRTFPSPPPQMQMYSTDNSQ*QEIYRI Trigger: AATTCTGTAGATTTCCTGGCACTGAGAGTTATCTGT...TGAGTACATTTGCATTTGGGGAGGTGGAGAAGGGAATGTTCTGGGGCCAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCTAACAGTTCCCATAAGCATGCAGAGCAATGCTATTTCCTTACCGTAGGTACCCGAGAAAAAGGATaGCTTCTCACACACAGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LSNSSHKHAEQCYFLTVGTREKG*LLTHSL Trigger: AAGACTGTGTGTGAGAAGTCATCCTTTTTCTCGGGT...ACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATGGGAACTGTTAGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCATGATAATCTGGGCAGCTCAGGAACTCAAATCTAAATCCGACCTCCACAACTCAACAGAGATTTaGATAACACTGAACTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: SFMIIWAAQELKSKSDLHNSTEI*ITLNCW Trigger: CCAACAGTTCAGTGTTATCCAAATCTCTGTTGAGTT...GTGGAGGTCGGATTTAGATTTGAGTTCCTGAGCTGCCCAGATTATCATGAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | CGCCCAGCAGGGAAGCAGCCCTGTAGGGACTCAGGATaGCCTGGAAAGGATGCGAGGTGGGGGCGGAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RPAGKQPCRDSG*PGKDARWGRRC Trigger: ACACCTCCGCCCCCACCTCGCATCCTTTCCAGGCCATCCTGAGTCCCTACAGGGCTGCTTCCCTGCTGGGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | TGTAGGGACTCAGGATGGCCTGGAAAGGATGCGAGGTaGGGGCGGAGGTGTCCTGGAGGATGGGTAAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CRDSGWPGKDAR*GRRCPGGWVSL Trigger: CAGACTTACCCATCCTCCAGGACACCTCCGCCCCCACCTCGCATCCTTTCCAGGCCATCCTGAGTCCCTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | CCTTACCGTAGGTCGCTTCTCCCAAGCTGTGAGGCCTaGCGCCGGTCAGTGAAGCGGAGATGTTTTCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PYRRSLLPSCEA*RRSVKRRCFPG Trigger: GCCAGGAAAACATCTCCGCTTCACTGACCGGCGCCAGGCCTCACAGCTTGGGAGAAGCGACCTACGGTAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | GCCAGCCCCTGGGAGGAGCCGTGCATGCAGAGACAATaGGTTGGTGGTGAGGGCCATTTGCAACAGGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: ASPWEEPCMQRQ*VGGEGHLQQEP Trigger: AGGTTCCTGTTGCAAATGGCCCTCACCACCAACTCATTGTCTCTGCATGCACGGCTCCTCCCAGGGGCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | GCCTGGAAAGGATGCGAGGTGGGGGCGGAGGTGTCCTaGAGGATGGGTAAGTCTGCTTTGCCAAACTGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: AWKGCEVGAEVS*RMGKSALPNWL Trigger: TAGCCAGTTTGGCAAAGCAGACTTACCCATCCTCCAGGACACCTCCGCCCCCACCTCGCATCCTTTCCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | CCTGTGGAGGCCAAAGAGGGTCAGGTCCCCTGGAACTaGAGTTACAGAATGTTGGGAGCCACCAGGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PVEAKEGQVPWN*SYRMLGATRWV Trigger: CACCCACCTGGTGGCTCCCAACATTCTGTAACTCCAGTTCCAGGGGACCTGACCCTCTTTGGCCTCCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | GGTCGCTGGCCTCTCAGCCGGCCCTGCGCAGGCCAATaGGCTTGGAAAGCTTTGCACAGTTTTCGAGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GRWPLSRPCAGQ*AWKALHSFRVS Trigger: TGAAACTCGAAAACTGTGCAAAGCTTTCCAAGCTCATTGGCCTGCGCAGGGCCGGCTGAGAGGCCAGCGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235930.2 |
||
| 3UTR GCA 72 bp | GAAAGCACCTCTCGGGAATGGCAGCTTCCACTCCTGTaGGAGCCTCACTCCCGTCAGTCTCCATTCTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ESTSREWQLPLL*EPHSRQSPFCG Trigger: ACCACAGAATGGAGACTGACGGGAGTGAGGCTCGCACAGGAGTGGAAGCTGCCATTCCCGAGAGGTGCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR GCA 72 bp | GCCATTTGCAACAGGAACCTGCTGGGATTCCCAAGGTaGCTCTGGCAGCGCCAGTTCAGAGGAGTGAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: AICNRNLLGFPR*LWQRQFRGVRM Trigger: CATCCTCACTCCTCTGAACTGGCGCTGCCAGAGGCACCTTGGGAATCCCAGCAGGTTCCTGTTGCAAATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | AGGGTCAGGTCCCCTGGAACTGGAGTTACAGAATGTTaGGAGCCACCAGGTGGGTGCGGGGAATTGAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: RVRSPGTGVTEC*EPPGGCGELNL Trigger: CAGGTTCAATTCCCCGCACCCACCTGGTGGCTCCCAACATTCTGTAACTCCAGTTCCAGGGGACCTGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | GCAATGCCTGTGGAGGCCAAAGAGGGTCAGGTCCCCTaGAACTGGAGTTACAGAATGTTGGGAGCCACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: AMPVEAKEGQVP*NWSYRMLGATR Trigger: CCTGGTGGCTCCCAACATTCTGTAACTCCAGTTCCAGGGGACCTGACCCTCTTTGGCCTCCACAGGCATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCAGCTGGCTGGATCGGGCTCCAGCAGGGTTCTGCACTTCTTGTCCTTTCTTGGAGTTACAGAATGTaGGGAGCCACCAGGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SAAGWIGLQQGSALLVLSWSYRM*GATRWV Trigger: CACCCACCTGGTGGCTCCCAACATTCTGTAACTCCA...AGAAAGGACAAGAAGTGCAGAACCCTGCTGGAGCCCGATCCAGCCAGCTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR GCA 72 bp | TGTATGTGGGTGTTACACTGCCTGCATGTGTGTCCGTaGACCAGGTGCAGGCAATGCCTGTGGAGGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CMWVLHCLHVCP*TRCRQCLWRPK Trigger: CTTTGGCCTCCACAGGCATTGCCTGCACCTGGTGCACGGACACACATGCAGGCAGTGTAACACCCACATACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR GCA 72 bp | ACAGATTTAACGCCAGCCCCTGGGAGGAGCCGTGCATaGAGAGACAATGAGTTGGTGGTGAGGGCCATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TDLTPAPGRSRA*RDNELVVRAIC Trigger: GCAAATGGCCCTCACCACCAACTCATTGTCTCTGCATGCACGGCTCCTCCCAGGGGCTGGCGTTAAATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR GCA 72 bp | GCATGCAGAGACAATGAGTTGGTGGTGAGGGCCATTTaGAACAGGAACCTGCTGGGATTCCCAAGGTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ACRDNELVVRAI*NRNLLGFPRCL Trigger: GAGGCACCTTGGGAATCCCAGCAGGTTCCTGTTGCAAATGGCCCTCACCACCAACTCATTGTCTCTGCATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | AAAATGGCTGCTAACTCTGAGCCTCCCATGCCACGGTaGCAGACTCTTCCCTCTGTGTCTCTGTGCCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KMAANSEPPMPR*QTLPSVSLCLC Trigger: ACACAGGCACAGAGACACAGAGGGAAGAGTCTGTCACCGTGGCATGGGAGGCTCAGAGTTAGCAGCCATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR GCA 72 bp | CTGGGGAAGGACTGGAGGGGACAAGTCTCCAATCACTaGAGCTCTGCCCAACAAAGTCAGCAGAGAGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGKDWRGQVSNH*SSAQQSQQRVK Trigger: CTTTACTCTCTGCTGACTTTGTTGGGCAGAGCTGCAGTGATTGGAGACTTGTCCCCTCCAGTCCTTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR GCA 72 bp | AGCCAGACAAAATGGCTGCTAACTCTGAGCCTCCCATaGCACGGTGACAGACTCTTCCCTCTGTGTCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SQTKWLLTLSLP*HGDRLFPLCLC Trigger: ACAGAGACACAGAGGGAAGAGTCTGTCACCGTGGCATGGGAGGCTCAGAGTTAGCAGCCATTTTGTCTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR GCA 72 bp | ACTGGAGTTACAGAATGTTGGGAGCCACCAGGTGGGTaGGGGGAATTGAACCTGAGTCCTCTGGAAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: TGVTECWEPPGG*GELNLSPLEEK Trigger: CTTCTCTTCCAGAGGACTCAGGTTCAATTCCCCGCACCCACCTGGTGGCTCCCAACATTCTGTAACTCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | CACACTAAAATGTGCAGGGCACTCAGCCAGACAAAATaGCTGCTAACTCTGAGCCTCCCATGCCACGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: HTKMCRALSQTK*LLTLSLPCHGD Trigger: GTCACCGTGGCATGGGAGGCTCAGAGTTAGCAGCCATTTTGTCTGGCTGAGTGCCCTGCACATTTTAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | CCTGTGCGAGCCTCACTCCCGTCAGTCTCCATTCTGTaGTCTCAATCTGTGAGACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: PVRASLPSVSIL*SQSVRHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTCTCACAGATTGAGACCACAGAATGGAGACTGACGGGAGTGAGGCTCGCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | ACATGCCTAGGTAGTGGGCTTTTGCTGCAGACAGGATaGAGGACGAAACATGGGTCGTCTCTGGAATGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TCLGSGLLLQTG*RTKHGSSLECP Trigger: AGGGCATTCCAGAGACGACCCATGTTTCGTCCTTCATCCTGTCTGCAGCAAAAGCCCACTACCTAGGCATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | GCCGCAGTCGCTCATCTCTGTATAACCCCGCCAAATTaGTCAGCTCCGACTTTTGCTGTTTCTCCTTCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: AAVAHLCITPPN*SAPTFAVSPSN Trigger: GTTGGAAGGAGAAACAGCAAAAGTCGGAGCTGACCAATTTGGCGGGGTTATACAGAGATGAGCGACTGCGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235930.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCTCAATCTGTGAGACACACACACACACACACACACACACACACAGAGCAATGTCTCCTCTCCAGTTaGGCTCCTGCCCTTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: WSQSVRHTHTHTHTHTEQCLLSS*APALLC Trigger: GCACAGAAGGGCAGGAGCCAAACTGGAGAGGAGACA...TTGCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCACAGATTGAGACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTGGCCCCAGAACATTCCCTTCTCCACCTCCCCAAATGCAAATGTACTCAAGTGAGGATGGAGACTaGCGGATGGAGAATTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: DSGPRTFPSPPPQMQMYSSEDGD*RMENSA Trigger: TGCTGAATTCTCCATCCGCAAGTCTCCATCCTCACT...TGAGTACATTTGCATTTGGGGAGGTGGAGAAGGGAATGTTCTGGGGCCAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | CACTCCCGTCAGTCTCCATTCTGTGGTCTCAATCTGTaGGACACACACACACACACACACACACACACACAG | + |
|
Preference number: 3 (lower is better) Translates to: HSRQSPFCGLNL*DTHTHTHTHTQ Trigger: CTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCACAGATTGAGACCACAGAATGGAGACTGACGGGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTGGCCCCAGAACATTCCCTTCTCCACCTCCCCAAATGCAAATGTACTCAACGGAGCTGTTAGTGTaGTCTCTGGTTATCATCACC | + |
|
Preference number: 3 (lower is better) Translates to: DSGPRTFPSPPPQMQMYSTELLV*SLVIIT Trigger: GGTGATGATAACCAGAGACAACACTAACAGCTCCGT...TGAGTACATTTGCATTTGGGGAGGTGGAGAAGGGAATGTTCTGGGGCCAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | GACAATAAAGGAGCCTCACCTATGGTGGCTCACAACTaGAATCACAGCTCTCAAGAGGCTCAGGCAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DNKGASPMVAHN*NHSSQEAQAGE Trigger: TTCTCCTGCCTGAGCCTCTTGAGAGCTGTGATTTCAGTTGTGAGCCACCATAGGTGAGGCTCCTTTATTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR GCA 72 bp | CTGTGTCTCCTCTCCAGTTTGGCTCCTGCCCTTCTGTaGATTCCTGTGCTCATCATACAACCGTTAACACTA | + |
|
Preference number: 3 (lower is better) Translates to: LCLLSSLAPALL*IPVLIIQPLTL Trigger: TAGTGTTAACGGTTGTATGATGAGCACAGGAATGCACAGAAGGGCAGGAGCCAAACTGGAGAGGAGACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | GAGGTGGTGACTTTACAGCAGGAGAGGTATAATTCTTaGCAGACACCACCAATACTCTGCAGTGCACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: EVVTLQQERYNS*QTPPILCSALA Trigger: AGCCAGTGCACTGCAGAGTATTGGTGGTGTCTGCCAAGAATTATACCTCTCCTGCTGTAAAGTCACCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTGGCCCCAGAACATTCCCTTCTCCACCTCCCCAAATGCAAATGTACTCAATGGGTAAGTCTGCTTaGCCAAACTGGCTAGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: DSGPRTFPSPPPQMQMYSMGKSA*PNWLES Trigger: TGATTCTAGCCAGTTTGGCAAAGCAGACTTACCCAT...TGAGTACATTTGCATTTGGGGAGGTGGAGAAGGGAATGTTCTGGGGCCAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | ATGAAGGACGAAACATGGGTCGTCTCTGGAATGCCCTaGCCTACTTCACAGAGGAGTTGGGTCCAAACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: MKDETWVVSGMP*PTSQRSWVQTL Trigger: TAAAGTTTGGACCCAACTCCTCTGTGAAGTAGGTCAGGGCATTCCAGAGACGACCCATGTTTCGTCCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | CACAGGAAGGCCCAACCACACAGCCTAGGCAATCCTTaGCTTAGTTCTAGAAAGAGTTGCTTTTTCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HRKAQPHSLGNP*LSSRKSCFFCL Trigger: GAGGCAGAAAAAGCAACTCTTTCTAGAACTAAGTCAAGGATTGCCTAGGCTGTGTGGTTGGGCCTTCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | CAGCTGGCCTTGAACTCACAGTATTCCGTCTGCCTCTaGATTCTGAGTGCTGGGTTTAAAGCTATATGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QLALNSQYSVCL*ILSAGFKAICH Trigger: GTGGCATATAGCTTTAAACCCAGCACTCAGAATTCAGAGGCAGACGGAATACTGTGAGTTCAAGGCCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | GAGCTTGGAAAGCTTTGCACAGTTTTCGAGTTTCAGTaGCTCTGCTTTCTGCCGCAGTCGCTCATCTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ELGKLCTVFEFQ*LCFLPQSLISV Trigger: TACAGAGATGAGCGACTGCGGCAGAAAGCAGAGTCACTGAAACTCGAAAACTGTGCAAAGCTTTCCAAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235930.2 |
||
| 3UTR CCA 72 bp | GTGTCCTGGAGGATGGGTAAGTCTGCTTTGCCAAACTaGCTAGAATCACCCGAGAAAAAGGATGACTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VSWRMGKSALPN*LESPEKKDDFS Trigger: TGAGAAGTCATCCTTTTTCTCGGGTGATTCTAGCCAGTTTGGCAAAGCAGACTTACCCATCCTCCAGGACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCTAACAGTTCCCATAAGCATGCAGAGCAATGCTATTTCCTTACCGTAGGTGAGAGAATGGCCTGCTaGTGCCTCCTGAGTCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSNSSHKHAEQCYFLTVGERMAC*CLLSPK Trigger: CTTAGGACTCAGGAGGCACAAGCAGGCCATTCTCTC...ACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATGGGAACTGTTAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CAA 90 bp | TCAATCTCCAGTACCACAGAAACCAGGTCTAACTCTAGCATTCAGGAGGTAGAGAGCACTCCAGAGACATaGGCAGGAAGATCTGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SISSTTETRSNSSIQEVESTPET*AGRSVS Trigger: ACTCACAGATCTTCCTGCCAATGTCTCTGGAGTGCT...CTCTACCTCCTGAATGCTAGAGTTAGACCTGGTTTCTGTGGTACTGGAGATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCACAGGCCCAAACGTCAAGGTGTTTAGTAACTTGGCCCCTTCCCAAAATATACTTCACAGAGGAGTaGGGTCCAAACTTTACCATG | + |
|
Preference number: 3 (lower is better) Translates to: TAQAQTSRCLVTWPLPKIYFTEE*GPNFTM Trigger: CATGGTAAAGTTTGGACCCAACTCCTCTGTGAAGTA...TATTTTGGGAAGGGGCCAAGTTACTAAACACCTTGACGTTTGGGCCTGTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CAA 90 bp | GACTCTGGCCCCAGAACATTCCCTTCTCCACCTCCCCAAATGCAAATGTACTCATCTCATTATGTAACTTaGGCTGGTCTGGAACTGATA | + |
|
Preference number: 3 (lower is better) Translates to: DSGPRTFPSPPPQMQMYSSHYVT*AGLELI Trigger: TATCAGTTCCAGACCAGCCAAAGTTACATAATGAGA...TGAGTACATTTGCATTTGGGGAGGTGGAGAAGGGAATGTTCTGGGGCCAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR GCA 72 bp | GTCCTTTCTAACAGTTCCCATAAGCATGCAGAGCAATaGTATTTCCTTACCGTAGGTCGCTTCTCCCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VLSNSSHKHAEQ*YFLTVGRFSQA Trigger: AGCTTGGGAGAAGCGACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATGGGAACTGTTAGAAAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | GAGAAGACTAAGACAATAAAGGAGCCTCACCTATGGTaGCTCACAACTGAAATCACAGCTCTCAAGAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: EKTKTIKEPHLW*LTTEITALKRL Trigger: GAGCCTCTTGAGAGCTGTGATTTCAGTTGTGAGCCACCATAGGTGAGGCTCCTTTATTGTCTTAGTCTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | ACAGCACAGGCCCAAACGTCAAGGTGTTTAGTAACTTaGCCCCTTCCCAAAATAAAGGGATTAGGACACCAA | + |
|
Preference number: 3 (lower is better) Translates to: TAQAQTSRCLVT*PLPKIKGLGHQ Trigger: TTGGTGTCCTAATCCCTTTATTTTGGGAAGGGGCCAAGTTACTAAACACCTTGACGTTTGGGCCTGTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR-3UTR CAA 90 bp | CATAAGCATGCAGAGCAATGCTATTTCCTTACCGTAGGTCGCTTCTCCCAAGCTTCAAATCAGGCAGCTTaGCTTATGGTCCTAACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: HKHAEQCYFLTVGRFSQASNQAA*LMVLTQ Trigger: TTGAGTTAGGACCATAAGCAAAGCTGCCTGATTTGA...AGCTTGGGAGAAGCGACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | AGAAGTTGTTCAAGGTTTTTGACTGTATATGAATTTTaGGGCCAGCCTGGGCTACATGAGACCCTACCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RSCSRFLTVYEF*GQPGLHETLPK Trigger: TTTAGGTAGGGTCTCATGTAGCCCAGGCTGGCCTCAAAATTCATATACAGTCAAAAACCTTGAACAACTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | CTGAGTGCTGGGTTTAAAGCTATATGCCACCATGCCTaGCACATTTTACAAAATAAACTCCTTGCTGCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSAGFKAICHHA*HILQNKLLAAH Trigger: ATGAGCAGCAAGGAGTTTATTTTGTAAAATGTGTCAGGCATGGTGGCATATAGCTTTAAACCCAGCACTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | CCTAACTCAACAGAGATTTGGATAACACTGAACTGTTaGCTACGTAGTTCAATTTCTCTACAGTCCTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PNSTEIWITLNC*LRSSISLQSLG Trigger: CCCTAAGGACTGTAGAGAAATTGAACTACGTAGCCAACAGTTCAGTGTTATCCAAATCTCTGTTGAGTTAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | GGCAGCTTTGCTTATGGTCCTAACTCAACAGAGATTTaGATAACACTGAACTGTTGGCTACGTAGTTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: GSFAYGPNSTEI*ITLNCWLRSSI Trigger: AATTGAACTACGTAGCCAACAGTTCAGTGTTATCCAAATCTCTGTTGAGTTAGGACCATAAGCAAAGCTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR GCA 72 bp | GTCTCTGGTTATCATCACCTCACAGATAACTCTCAGTaGCAGGAAATCTACAGAATTAGTAAAAGTCGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VSGYHHLTDNSQ*QEIYRISKSRL Trigger: TAGACGACTTTTACTAATTCTGTAGATTTCCTGGCACTGAGAGTTATCTGTGAGGTGATGATAACCAGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CCA 72 bp | TTACCGGCTTCTTTTAAATTCAGTTTCATGATAATCTaGGCAGCTCAGGAACTCAAATCTAAATCCGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: LPASFKFSFMII*AAQELKSKSDL Trigger: GAGGTCGGATTTAGATTTGAGTTCCTGAGCTGCCCAGATTATCATGAAACTGAATTTAAAAGAAGCCGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR TCA 72 bp | AACACTATTCTAGATAGTGCCATATTATCTTTCAACTaGAGCAAGGAAACAGGATATGAGTACTGTAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: NTILDSAILSFN*SKETGYEYCRL Trigger: TAGCCTACAGTACTCATATCCTGTTTCCTTGCTTCAGTTGAAAGATAATATGGCACTATCTAGAATAGTGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CAA 72 bp | GCCCCTGGGAGGAGCCGTGCATGCAGAGACAATGAGTaGGTGGTGAGGGCCATTTGCAACAGGAACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: APGRSRACRDNE*VVRAICNRNLL Trigger: CAGCAGGTTCCTGTTGCAAATGGCCCTCACCACCAACTCATTGTCTCTGCATGCACGGCTCCTCCCAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR CCA 90 bp | CTGCTAACTCTGAGCCTCCCATGCCACGGTGACAGACTCTTCCCTCTGTGTCTCGTTCCTCTGTGTAAGTaGCGTTCCCCTCTCCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTLSLPCHGDRLFPLCLVPLCK*RSPLPA Trigger: GGCAGGGAGAGGGGAACGCCACTTACACAGAGGAAC...GAGACACAGAGGGAAGAGTCTGTCACCGTGGCATGGGAGGCTCAGAGTTAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CAA 72 bp | GAGGGTCAGGTCCCCTGGAACTGGAGTTACAGAATGTaGGGAGCCACCAGGTGGGTGCGGGGAATTGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: EGQVPWNWSYRM*GATRWVRGIEP Trigger: AGGTTCAATTCCCCGCACCCACCTGGTGGCTCCCAACATTCTGTAACTCCAGTTCCAGGGGACCTGACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR TCA 90 bp | CTGCTAACTCTGAGCCTCCCATGCCACGGTGACAGACTCTTCCCTCTGTGTCTCTGGCTCGAGGGACAGTaGAAGTCACCTGCTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLTLSLPCHGDRLFPLCLWLEGQ*KSPAHL Trigger: GAGATGAGCAGGTGACTTTCACTGTCCCTCGAGCCA...GAGACACAGAGGGAAGAGTCTGTCACCGTGGCATGGGAGGCTCAGAGTTAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CAA 72 bp | ACAGAATGTTGGGAGCCACCAGGTGGGTGCGGGGAATaGAACCTGAGTCCTCTGGAAGAGAAGCCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TECWEPPGGCGE*NLSPLEEKPVL Trigger: GAGCACTGGCTTCTCTTCCAGAGGACTCAGGTTCAATTCCCCGCACCCACCTGGTGGCTCCCAACATTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CAA 72 bp | CTGGCCTCTCAGCCGGCCCTGCGCAGGCCAATGAGCTaGGAAAGCTTTGCACAGTTTTCGAGTTTCAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LASQPALRRPMS*ESFAQFSSFSD Trigger: GTCACTGAAACTCGAAAACTGTGCAAAGCTTTCCAAGCTCATTGGCCTGCGCAGGGCCGGCTGAGAGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235930.2 |
||
| CDS-3UTR TCA 90 bp | GCAATGCCTGTGGAGGCCAAAGAGGGTCAGGTCCCCTGGAACTGGAGTTACAGATCATCGCTGGCATTGTaGGAAACACCCAGGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AMPVEAKEGQVPWNWSYRSSLAL*ETPRMS Trigger: TGACATCCTGGGTGTTTCTCACAATGCCAGCGATGA...TCTGTAACTCCAGTTCCAGGGGACCTGACCCTCTTTGGCCTCCACAGGCATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR GCA 90 bp | CTTCTAAACGCCCAGCAGGGAAGCAGCCCTGTAGGGACTCAGGATGGCCTGGAAGGGATTGCTCAGGACTaGAAAGGCATTTCCTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNAQQGSSPVGTQDGLEGIAQD*KGISYC Trigger: GCAATAGGAAATGCCTTTGCAGTCCTGAGCAATCCC...TTCCAGGCCATCCTGAGTCCCTACAGGGCTGCTTCCCTGCTGGGCGTTTAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR TCA 90 bp | TCCAGCAGGGTTCTGCACTTCTTGTCCTTTCTAACAGTTCCCATAAGCATGCAGTCTCCCTGCCGCGTCTaGTTCCACTCATTCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRVLHFLSFLTVPISMQSPCRV*FHSFSD Trigger: GTCTGAGAATGAGTGGAATCAGACGCGGCAGGGAGA...CTGCATGCTTATGGGAACTGTTAGAAAGGACAAGAAGTGCAGAACCCTGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR TCA 90 bp | GTAGTCTTTCTCTATTGTCTTCTCCAGGTCACGAAGGGAAGCGCCTCGGTAGGCTATAGCCCAAGGTCCTaGGATTTGTCTTCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VVFLYCLLQVTKGSASVGYSPRS*DLSSSL Trigger: GAGAGAGGAAGACAAATCTCAGGACCTTGGGCTATA...GCCTACCGAGGCGCTTCCCTTCGTGACCTGGAGAAGACAATAGAGAAAGACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235930.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGCTGGCTGGATCGGGCTCCAGCAGGGTTCTGCACTTCTTGTCCTTTCTAAAGGCATTTCCTATTaGTTTGAAGGCCTCTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAAGWIGLQQGSALLVLSKGISY*FEGLCC Trigger: GCAACAGAGGCCTTCAAAGCAATAGGAAATGCCTTT...AGAAAGGACAAGAAGTGCAGAACCCTGCTGGAGCCCGATCCAGCCAGCTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR GCA 90 bp | TGGCTCACAACTGAAATCACAGCTCTCAAGAGGCTCAGGCAGGAGAATCACTGCGTCTCTTGTCGGGATTaGTCAGGACTGCAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLTTEITALKRLRQENHCVSCRD*SGLQRH Trigger: ATGCCTTTGCAGTCCTGAGCAATCCCGACAAGAGAC...GCAGTGATTCTCCTGCCTGAGCCTCTTGAGAGCTGTGATTTCAGTTGTGAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR CCA 90 bp | CTTCTAAACGCCCAGCAGGGAAGCAGCCCTGTAGGGACTCAGGATGGCCTGGAAAGGCCGCTTGTCTTCTaGGTATTTGTTTCTTCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLNAQQGSSPVGTQDGLERPLVF*VFVSSN Trigger: ATTAGAAGAAACAAATACCCAGAAGACAAGCGGCCT...TTCCAGGCCATCCTGAGTCCCTACAGGGCTGCTTCCCTGCTGGGCGTTTAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CAA 72 bp | CGTCTCTGGAATGCCCTGACCTACTTCACAGAGGAGTaGGGTCCAAACTTTACCATGCCTGTGACTAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RLWNALTYFTEE*GPNFTMPVTKT Trigger: GGTCTTAGTCACAGGCATGGTAAAGTTTGGACCCAACTCCTCTGTGAAGTAGGTCAGGGCATTCCAGAGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CAA 72 bp | TGCCGCAGTCGCTCATCTCTGTATAACCCCGCCAAATaGGTCAGCTCCGACTTTTGCTGTTTCTCCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CRSRSSLYNPAK*VSSDFCCFSFQ Trigger: TTGGAAGGAGAAACAGCAAAAGTCGGAGCTGACCAATTTGGCGGGGTTATACAGAGATGAGCGACTGCGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235930.2 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGCCACATTTCCTATTGCTTTaGAGGCCTCTGTTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTQSKNSPSRELTVPHFLLL*RPLLLQ Trigger: CTGGAGCAACAGAGGCCTTCAAAGCAATAGGAAATG...TGGCACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGTAGAGGCAGGAGAATCACAAGTCCAATGTCTTGGGAAGTGGTGGCACAGAACTGGAAGCAGCTaGACAAATGCCGAATATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QEVEAGESQVQCLGKWWHRTGSS*TNAEYG Trigger: TCCATATTCGGCATTTGTTCAGCTGCTTCCAGTTCT...GTGCCACCACTTCCCAAGACATTGGACTTGTGATTCTCCTGCCTCTACCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR GCA 90 bp | GCAATGCCTGTGGAGGCCAAAGAGGGTCAGGTCCCCTGGAACTGGAGTTACAGAACAGTGAAAGTCACCTaGTCATCTCCATATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AMPVEAKEGQVPWNWSYRTVKVT*SSPYSS Trigger: TGATGAATATGGAGATGAGCAGGTGACTTTCACTGT...TCTGTAACTCCAGTTCCAGGGGACCTGACCCTCTTTGGCCTCCACAGGCATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR GCA 90 bp | CATAAGCATGCAGAGCAATGCTATTTCCTTACCGTAGGTCGCTTCTCCCAAGCTAGTGACTCTGCTTTCTaGCGCAGTCGCTCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HKHAEQCYFLTVGRFSQASDSAF*RSRSSL Trigger: CAGAGATGAGCGACTGCGGCAGAAAGCAGAGTCACT...AGCTTGGGAGAAGCGACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGTAGAGGCAGGAGAATCACAAGTCCAATGTCTTGGGAAGTGGTGGCACCACAATCACCAGAACTaGAAGCAGCTGAACAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QEVEAGESQVQCLGKWWHHNHQN*KQLNKC Trigger: GCATTTGTTCAGCTGCTTCCAGTTCTGGTGATTGTG...GTGCCACCACTTCCCAAGACATTGGACTTGTGATTCTCCTGCCTCTACCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGATAACCCCGCCAAATTaGTCAGCTCCGACTTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTQSKNSPSRELTVITPPN*SAPTFA Trigger: AGCAAAAGTCGGAGCTGACCAATTTGGCGGGGTTAT...CACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CAA 72 bp | ACAAGTCCAATGTCTTGGGAAGTGGTGGCACACACCTaGAATCCAGATAACCAGCACTCCAGAGACATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSPMSWEVVAHT*NPDNQHSRDIG Trigger: GCCAATGTCTCTGGAGTGCTGGTTATCTGGATTCAAGGTGTGTGCCACCACTTCCCAAGACATTGGACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGTAGAGGCAGGAGAATCACAAGTCCAATGTCTTGGGAAGTGGTGGCACCATGTGAATATTTCCTaGAGGGAAATGTCCTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QEVEAGESQVQCLGKWWHHVNIS*REMSSE Trigger: TTCGGAGGACATTTCCCTTCAGGAAATATTCACATG...GTGCCACCACTTCCCAAGACATTGGACTTGTGATTCTCCTGCCTCTACCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR TCA 90 bp | GACTCTGGCCCCAGAACATTCCCTTCTCCACCTCCCCAAATGCAAATGTACTCATTAGCAGCGAGCAGCTaGGTAATGACAGAAATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSGPRTFPSPPPQMQMYSLAASS*VMTEIV Trigger: GACTATTTCTGTCATTACTCAGCTGCTCGCTGCTAA...TGAGTACATTTGCATTTGGGGAGGTGGAGAAGGGAATGTTCTGGGGCCAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR GCA 90 bp | TCAATCTCCAGTACCACAGAAACCAGGTCTAACTCTAGCATTCAGGAGGTAGAGCCTTTTGCGCCTTCATaGAGTTACAGCAGCCGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SISSTTETRSNSSIQEVEPFAPS*SYSSRK Trigger: CTTGCGGCTGCTGTAACTGCATGAAGGCGCAAAAGG...CTCTACCTCCTGAATGCTAGAGTTAGACCTGGTTTCTGTGGTACTGGAGATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR CCA 90 bp | ACACACACACACACACAGAGCAAAAACAGCCCCAGCAGAGAACTCACTGTGCCAATAGAACAGACTATATaGGGGATTAGCAGCGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTHTQSKNSPSRELTVPIEQTI*GISSEQ Trigger: CTGCTCGCTGCTAATCCCCCATATAGTCTGTTCTAT...TGGCACAGTGAGTTCTCTGCTGGGGCTGTTTTTGCTCTGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR TCA 90 bp | TACAGCAGGAGAGGTATAATTCTTGGCAGACACCACCAATACTCTGCAGTGCACGCCGAATATGGAGTCTaGGATTTGTCTTCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSRRGIILGRHHQYSAVHAEYGV*DLSSSL Trigger: GAGAGAGGAAGACAAATCTCAGACTCCATATTCGGC...GTGCACTGCAGAGTATTGGTGGTGTCTGCCAAGAATTATACCTCTCCTGCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR GCA 90 bp | ACAGCACAGGCCCAAACGTCAAGGTGTTTAGTAACTTGGCCCCTTCCCAAAATAGGCACCTGCAGGTTCTaGGTTTCTCTAGAAATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TAQAQTSRCLVTWPLPKIGTCRF*VSLEMV Trigger: TACCATTTCTAGAGAAACGCAGAACCTGCAGGTGCC...TATTTTGGGAAGGGGCCAAGTTACTAAACACCTTGACGTTTGGGCCTGTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR TCA 90 bp | GACTCTGGCCCCAGAACATTCCCTTCTCCACCTCCCCAAATGCAAATGTACTCAAATTTCTGCACTTCTTaGTTCTTTGTACCCCACGTA | + |
|
Preference number: 4 (lower is better) Translates to: DSGPRTFPSPPPQMQMYSNFCTS*FFVPHV Trigger: TACGTGGGGTACAAAGAATCAAGAAGTGCAGAAATT...TGAGTACATTTGCATTTGGGGAGGTGGAGAAGGGAATGTTCTGGGGCCAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR GCA 90 bp | CATAAGCATGCAGAGCAATGCTATTTCCTTACCGTAGGTCGCTTCTCCCAAGCTGTCAGCTCCGACTTTTaGTGTTTCTCCTTCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: HKHAEQCYFLTVGRFSQAVSSDF*CFSFQQ Trigger: TTGTTGGAAGGAGAAACAGCAAAAGTCGGAGCTGAC...AGCTTGGGAGAAGCGACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| 3UTR CAA 72 bp | AACAGCACAGGCCCAAACGTCAAGGTGTTTAGTAACTaGGCCCCTTCCCAAAATAAAGGGATTAGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: NSTGPNVKVFSN*APSQNKGIRTP Trigger: TGGTGTCCTAATCCCTTTATTTTGGGAAGGGGCCAAGTTACTAAACACCTTGACGTTTGGGCCTGTGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
||
| CDS-3UTR TCA 90 bp | ATCAATGTAGTCTTTCTCTATTGTCTTCTCCAGGTCACGAAGGGAAGCGCCTCGCATGTGAATATTTCCTaGAGGGAAATGTCCTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: INVVFLYCLLQVTKGSASHVNIS*REMSSE Trigger: TTCGGAGGACATTTCCCTTCAGGAAATATTCACATG...CGAGGCGCTTCCCTTCGTGACCTGGAGAAGACAATAGAGAAAGACTACATTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235930.2 |
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| CDS-3UTR TCA 90 bp | CTTTCTAACAGTTCCCATAAGCATGCAGAGCAATGCTATTTCCTTACCGTAGGTGTTTTCGAGTTTCAGTaGCTCTGCTTTCTGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSNSSHKHAEQCYFLTVGVFEFQ*LCFLPQ Trigger: CTGCGGCAGAAAGCAGAGTCACTGAAACTCGAAAAC...ACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATGGGAACTGTTAGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS-3UTR CCA 90 bp | TCAATCTCCAGTACCACAGAAACCAGGTCTAACTCTAGCATTCAGGAGGTAGAGAACAAATGCCGAATATaGAGTCTGAGATTTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SISSTTETRSNSSIQEVENKCRI*SLRFVF Trigger: GAAGACAAATCTCAGACTCCATATTCGGCATTTGTT...CTCTACCTCCTGAATGCTAGAGTTAGACCTGGTTTCTGTGGTACTGGAGATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| 3UTR CAA 72 bp | AAGTCTCCCAAAAGATGTAGGCAGGAGAACAAAACTTaGTTCACCAACACACAGACAACATATCTAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: KSPKRCRQENKT*FTNTQTTYLNC Trigger: ACAGTTTAGATATGTTGTCTGTGTGTTGGTGAACAAAGTTTTGTTCTCCTGCCTACATCTTTTGGGAGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS-3UTR CAA 90 bp | CTGCTAACTCTGAGCCTCCCATGCCACGGTGACAGACTCTTCCCTCTGTGTCTCGGTCAGCTCCGACTTTaGCTGTTTCTCCTTCCAACA | + |
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Preference number: 5 (lower is better) Translates to: LLTLSLPCHGDRLFPLCLGQLRL*LFLLPT Trigger: TGTTGGAAGGAGAAACAGCAAAAGTCGGAGCTGACC...GAGACACAGAGGGAAGAGTCTGTCACCGTGGCATGGGAGGCTCAGAGTTAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS-3UTR CAA 90 bp | CAGGAGGTAGAGGCAGGAGAATCACAAGTCCAATGTCTTGGGAAGTGGTGGCACCGCAGGCCAATGAGCTaGGAAAGCTTTGCACAGTTT | + |
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Preference number: 5 (lower is better) Translates to: QEVEAGESQVQCLGKWWHRRPMS*ESFAQF Trigger: AAACTGTGCAAAGCTTTCCAAGCTCATTGGCCTGCG...GTGCCACCACTTCCCAAGACATTGGACTTGTGATTCTCCTGCCTCTACCTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS-3UTR CAA 90 bp | TACAGCAGGAGAGGTATAATTCTTGGCAGACACCACCAATACTCTGCAGTGCACAGTCTCTTGTCGGGATaGCTCAGGACTGCAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: YSRRGIILGRHHQYSAVHSLLSG*LRTAKA Trigger: TGCCTTTGCAGTCCTGAGCAATCCCGACAAGAGACT...GTGCACTGCAGAGTATTGGTGGTGTCTGCCAAGAATTATACCTCTCCTGCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS GCA 90 bp | TCCATATTCATCATAGCGGAGTCTCTTGTCGGGATTGCTCAGGACTaGAAAGGCATTTCCTATTGCTTTGAAGGCCTCTGTTGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SIFIIAESLVGIAQD*KGISYCFEGLCCSR Trigger: CCTGGAGCAACAGAGGCCTTCAAAGCAATAGGAAATGCCTTTGCAGTCCTGAGCAATCCCGACAAGAGACTCCGCTATGATGAATATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025208.7 ENSMUST00000237995.2 |
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| CDS CCA 90 bp | GTTACAGCAGCCGCAAGGATCATGGCTGTCAGGCCGCTTGTCTTCTaGGTATTTGTTTCTTCTAATTGCATCAATGTAAGCTTGGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: VTAAARIMAVRPLVF*VFVSSNCINVSLGP Trigger: TGGACCCAAGCTTACATTGATGCAATTAGAAGAAACAAATACCCAGAAGACAAGCGGCCTGACAGCCATGATCCTTGCGGCTGCTGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS-3UTR CAA 90 bp | CAGGAGGTAGAGGCAGGAGAATCACAAGTCCAATGTCTTGGGAAGTGGTGGCACTGTCGTCTGTCACATTaGAGAACATGTGAATATTTC | + |
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Preference number: 5 (lower is better) Translates to: QEVEAGESQVQCLGKWWHCRLSH*RTCEYF Trigger: GAAATATTCACATGTTCTCAAATGTGACAGACGACA...GTGCCACCACTTCCCAAGACATTGGACTTGTGATTCTCCTGCCTCTACCTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS-3UTR CAA 90 bp | TCTGCTTTCTGCCGCAGTCGCTCATCTCTGTATAACCCCGCCAAATTGGTCAGCTGTCGTCTGTCACATTaGAGAACATGTGAATATTTC | + |
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Preference number: 5 (lower is better) Translates to: SAFCRSRSSLYNPAKLVSCRLSH*RTCEYF Trigger: GAAATATTCACATGTTCTCAAATGTGACAGACGACA...GCTGACCAATTTGGCGGGGTTATACAGAGATGAGCGACTGCGGCAGAAAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235930.2 |
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| CDS-3UTR CAA 90 bp | CTTTCTAACAGTTCCCATAAGCATGCAGAGCAATGCTATTTCCTTACCGTAGGTTGGCTGTCAGGCCGCTaGTCTTCTGGGTATTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: LSNSSHKHAEQCYFLTVGWLSGR*SSGYLF Trigger: AAACAAATACCCAGAAGACAAGCGGCCTGACAGCCA...ACCTACGGTAAGGAAATAGCATTGCTCTGCATGCTTATGGGAACTGTTAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS-3UTR CAA 90 bp | ACAGCACAGGCCCAAACGTCAAGGTGTTTAGTAACTTGGCCCCTTCCCAAAATATGTAGTCTTTCTCTATaGTCTTCTCCAGGTCACGAA | + |
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Preference number: 5 (lower is better) Translates to: TAQAQTSRCLVTWPLPKICSLSL*SSPGHE Trigger: TTCGTGACCTGGAGAAGACAATAGAGAAAGACTACA...TATTTTGGGAAGGGGCCAAGTTACTAAACACCTTGACGTTTGGGCCTGTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS CCA 90 bp | AGCGAGCAGCTGAGTAATGACAGAAATAGTCACAATCACCAGAACTaGAAGCAGCTGAACAAATGCCGAATATGGAGTCTGAGATTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SEQLSNDRNSHNHQN*KQLNKCRIWSLRFV Trigger: GACAAATCTCAGACTCCATATTCGGCATTTGTTCAGCTGCTTCCAGTTCTGGTGATTGTGACTATTTCTGTCATTACTCAGCTGCTCGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS TCA 90 bp | CTTCAAAGTCTTTGTAATAATGATAAGATCTGGCTCGAGGGACAGTaGAAGTCACCTGCTCATCTCCATATTCATCATAGCGGAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LQSLCNNDKIWLEGQ*KSPAHLHIHHSGVS Trigger: AGAGACTCCGCTATGATGAATATGGAGATGAGCAGGTGACTTTCACTGTCCCTCGAGCCAGATCTTATCATTATTACAAAGACTTTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025208.7 ENSMUST00000237995.2 |
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| CDS GCA 72 bp | ATCATAGCGGAGTCTCTTGTCGGGATTGCTCAGGACTaGAAAGGCATTTCCTATTGCTTTGAAGGCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: IIAESLVGIAQD*KGISYCFEGLC Trigger: ACAGAGGCCTTCAAAGCAATAGGAAATGCCTTTGCAGTCCTGAGCAATCCCGACAAGAGACTCCGCTATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025208.7 ENSMUST00000237995.2 |
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| CDS CCA 72 bp | CTGAGTAATGACAGAAATAGTCACAATCACCAGAACTaGAAGCAGCTGAACAAATGCCGAATATGGAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LSNDRNSHNHQN*KQLNKCRIWSL Trigger: CAGACTCCATATTCGGCATTTGTTCAGCTGCTTCCAGTTCTGGTGATTGTGACTATTTCTGTCATTACTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025208.7 |
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| CDS TCA 72 bp | CTTTGTAATAATGATAAGATCTGGCTCGAGGGACAGTaGAAGTCACCTGCTCATCTCCATATTCATCATAGC | + |
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Preference number: 6 (lower is better) Translates to: LCNNDKIWLEGQ*KSPAHLHIHHS Trigger: GCTATGATGAATATGGAGATGAGCAGGTGACTTTCACTGTCCCTCGAGCCAGATCTTATCATTATTACAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025208.7 ENSMUST00000237995.2 |
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