Pregenerated sensors for DNAJC15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022013Ensembl transcript IDs: ENSMUST00000022590.5, ENSMUST00000226459.2
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTAGGGAAGAGATaGAGACAGCAGCACACACTTCCCACAGTGACGGTGACAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: ARGQCLSVGEELGKR*RQQHTLPTVTVTGQ Trigger: CTGCCCTGTCACCGTCACTGTGGGAAGTGTGTGCTGCTGTCTCCATCTCTTCCCTAGCTCCTCCCCGACACTGAGACACTGACCTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 90 bp | CTTAGCAGGAAGGTGAGATGGAGGAGACGTAAGAGCCTGTTGGGGTaGCTCACTGCGATCTACATCACAGGGCTTGCTTTCGCAACCACT | + |
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Preference number: 1 (lower is better) Translates to: LSRKVRWRRRKSLLG*LTAIYITGLAFATT Trigger: AGTGGTTGCGAAAGCAAGCCCTGTGATGTAGATCGCAGTGAGTCACCCCAACAGGCTCTTACGTCTCCTCCATCTCACCTTCCTGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 90 bp | GTGGCCTTGCTGAAGGAAGTGTGTCAATGGGGTTTCAAAAGCCCATaGCAATCCCAGTGTCATCCTCTCTTCCTGCTGCCTGTGGATCTG | + |
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Preference number: 1 (lower is better) Translates to: VALLKEVCQWGFKSP*QSQCHPLFLLPVDL Trigger: CAGATCCACAGGCAGCAGGAAGAGAGGATGACACTGGGATTGGCATGGGCTTTTGAAACCCCATTGACACACTTCCTTCAGCAAGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 90 bp | GACTCACTGCGATCTACATCACAGGGCTTGCTTTCGCAACCACTCTaGCCAGCATTGACTTTTGAGGATCTCTGCTCTCCAGTCACAGCA | + |
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Preference number: 1 (lower is better) Translates to: DSLRSTSQGLLSQPL*PALTFEDLCSPVTA Trigger: TGCTGTGACTGGAGAGCAGAGATCCTCAAAAGTCAATGCTGGGCAGAGTGGTTGCGAAAGCAAGCCCTGTGATGTAGATCGCAGTGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CCA 90 bp | AGACCCAGGATGAAAAGAGCAGCCCCCATTTCCTGTCTTCTGCTGTaGATGAGCGTTCTCTTGCAGCTCTGTGCAGAAGCCCATAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: RPRMKRAAPISCLLL*MSVLLQLCAEAHRK Trigger: CTTTCTATGGGCTTCTGCACAGAGCTGCAAGAGAACGCTCATCCACAGCAGAAGACAGGAAATGGGGGCTGCTCTTTTCATCCTGGGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CCA 90 bp | GGTCTGAATAAGAATGGCCCCCACAGGCTCAGAGAAGTGAATGCTTaGTCACCAGGGAGTGGTACTACTTGGAAGGATTGGGAAGTGTGG | + |
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Preference number: 1 (lower is better) Translates to: GLNKNGPHRLREVNA*SPGSGTTWKDWEVW Trigger: CCACACTTCCCAATCCTTCCAAGTAGTACCACTCCCTGGTGACCAAGCATTCACTTCTCTGAGCCTGTGGGGGCCATTCTTATTCAGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 90 bp | CACTGCCCTGTACAACATCTCAGAACAGCCCAGGAGAGGCAGCAATaGACAGACTCTCCTAGCTCACCACCAAGTACAAACATTAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: HCPVQHLRTAQERQQ*TDSPSSPPSTNIRS Trigger: TGACCTAATGTTTGTACTTGGTGGTGAGCTAGGAGAGTCTGTGCATTGCTGCCTCTCCTGGGCTGTTCTGAGATGTTGTACAGGGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 90 bp | TCTGCACCCCAATCCACCGTTAACAGCTCTACAAAAGAACCCAGCTaGCTAAGCTCTCTTCAGGTTTCAGTTCTCACTCTAACCCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: SAPQSTVNSSTKEPS*LSSLQVSVLTLTLW Trigger: CCACAGGGTTAGAGTGAGAACTGAAACCTGAAGAGAGCTTAGGCAGCTGGGTTCTTTTGTAGAGCTGTTAACGGTGGATTGGGGTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 90 bp | GATCTACATCACAGGGCTTGCTTTCGCAACCACTCTGCCCAGCATTaGCTTTTGAGGATCTCTGCTCTCCAGTCACAGCAACTGATATGT | + |
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Preference number: 1 (lower is better) Translates to: DLHHRACFRNHSAQH*LLRISALQSQQLIC Trigger: ACATATCAGTTGCTGTGACTGGAGAGCAGAGATCCTCAAAAGTCAATGCTGGGCAGAGTGGTTGCGAAAGCAAGCCCTGTGATGTAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 90 bp | AGTTTGTGGGGCTGGAGAGATAGCTCAGGGATTAATAGCACTTGTTaGTTTTGTAGAGGACCCGAGTTTGGTTCCCATCACCTGCATGGT | + |
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Preference number: 1 (lower is better) Translates to: SLWGWRDSSGINSTC*FCRGPEFGSHHLHG Trigger: ACCATGCAGGTGATGGGAACCAAACTCGGGTCCTCTACAAAAGCAACAAGTGCTATTAATCCCTGAGCTATCTCTCCAGCCCCACAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CCA 90 bp | AATGCTTCAAATGAAATCTCATCAGGGATTCCCCCAGCCCCGAGCTaGAGGAACTCACACTGTTCAACCTTACAGCTGAGACTGCTAAGT | + |
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Preference number: 1 (lower is better) Translates to: NASNEISSGIPPAPS*RNSHCSTLQLRLLS Trigger: ACTTAGCAGTCTCAGCTGTAAGGTTGAACAGTGTGAGTTCCTCCAGCTCGGGGCTGGGGGAATCCCTGATGAGATTTCATTTGAAGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 90 bp | TTGCTTTCGCAACCACTCTGCCCAGCATTGACTTTTGAGGATCTCTaGTCTCCAGTCACAGCAACTGATATGTCTATTTCTGCTCACTCC | + |
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Preference number: 1 (lower is better) Translates to: LLSQPLCPALTFEDL*SPVTATDMSISAHS Trigger: GGAGTGAGCAGAAATAGACATATCAGTTGCTGTGACTGGAGAGCAGAGATCCTCAAAAGTCAATGCTGGGCAGAGTGGTTGCGAAAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 90 bp | ACCCATGTGGGGTTAATTATGAAGGCTGTTTCTGTGTGTTCATGCTaGTCTTCTGCAACACTGCCCTGTACAACATCTCAGAACAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: THVGLIMKAVSVCSC*SSATLPCTTSQNSP Trigger: TGGGCTGTTCTGAGATGTTGTACAGGGCAGTGTTGCAGAAGAGCAGCATGAACACACAGAAACAGCCTTCATAATTAACCCCACATGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 90 bp | CAGACCCATGTGGGGTTAATTATGAAGGCTGTTTCTGTGTGTTCATaGTGCTCTTCTGCAACACTGCCCTGTACAACATCTCAGAACAGC | + |
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Preference number: 1 (lower is better) Translates to: QTHVGLIMKAVSVCS*CSSATLPCTTSQNS Trigger: GCTGTTCTGAGATGTTGTACAGGGCAGTGTTGCAGAAGAGCAGCATGAACACACAGAAACAGCCTTCATAATTAACCCCACATGGGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CCA 90 bp | GCTAGAATGATGCAAACTCCATCATCTGACTCCTTCCAACATACCTaGTGCATTGCTTCAGGATTGAGACAAACTACATTGAGACCCCAC | + |
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Preference number: 1 (lower is better) Translates to: ARMMQTPSSDSFQHT*CIASGLRQTTLRPH Trigger: GTGGGGTCTCAATGTAGTTTGTCTCAATCCTGAAGCAATGCACCAGGTATGTTGGAAGGAGTCAGATGATGGAGTTTGCATCATTCTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 90 bp | AGAATGATGCAAACTCCATCATCTGACTCCTTCCAACATACCTGGTaGATTGCTTCAGGATTGAGACAAACTACATTGAGACCCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: RMMQTPSSDSFQHTW*IASGLRQTTLRPHS Trigger: AGAGTGGGGTCTCAATGTAGTTTGTCTCAATCCTGAAGCAATGCACCAGGTATGTTGGAAGGAGTCAGATGATGGAGTTTGCATCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CCA 90 bp | GATTCATCACAGACCTTGTGCTCTCAGAGTTCCAGCTGGATGGAATaGATGGTTGTTACTTCTGTTGTATCACTTCCCCATTCTGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: DSSQTLCSQSSSWME*MVVTSVVSLPHSEV Trigger: TACTTCAGAATGGGGAAGTGATACAACAGAAGTAACAACCATCCATTCCATCCAGCTGGAACTCTGAGAGCACAAGGTCTGTGATGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 90 bp | TTAAAGCCCAGGGTTCTATCATTTCAGGAAGACCCTCTCCAGTTCTaGGATTTAAAACACACTTCTCTTACTTCATCAATGATCTGTACC | + |
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Preference number: 1 (lower is better) Translates to: LKPRVLSFQEDPLQF*DLKHTSLTSSMICT Trigger: GGTACAGATCATTGATGAAGTAAGAGAAGTGTGTTTTAAATCTCAGAACTGGAGAGGGTCTTCCTGAAATGATAGAACCCTGGGCTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 90 bp | AAGCCATTAAGTGCACCTAACTCTCAAGAGCTCATGTTTTTGCTATaGATACTGAAACCATTTCATCCTTTGGTTATCACTGCTACCGAC | + |
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Preference number: 1 (lower is better) Translates to: KPLSAPNSQELMFLL*ILKPFHPLVITATD Trigger: GTCGGTAGCAGTGATAACCAAAGGATGAAATGGTTTCAGTATTCATAGCAAAAACATGAGCTCTTGAGAGTTAGGTGCACTTAATGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 90 bp | AAACCTATGAACTGTAAGCCAGCCTCAGTGAAATGTTTTCTTTCATaGGTTGCTATGGTCACGGTGTCTCTTTATAGCAACAGAATGGTA | + |
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Preference number: 1 (lower is better) Translates to: KPMNCKPASVKCFLS*VAMVTVSLYSNRMV Trigger: TACCATTCTGTTGCTATAAAGAGACACCGTGACCATAGCAACTCATGAAAGAAAACATTTCACTGAGGCTGGCTTACAGTTCATAGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 90 bp | TTTGAGCCTTTGCATTTTAAGCATGATTCTATTCTGCACCCTTCCTaGAGTGGTCAAACTCAGTACCAAGTGAAACGTTTTAAATGTTGT | + |
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Preference number: 1 (lower is better) Translates to: FEPLHFKHDSILHPS*SGQTQYQVKRFKCC Trigger: ACAACATTTAAAACGTTTCACTTGGTACTGAGTTTGACCACTGCAGGAAGGGTGCAGAATAGAATCATGCTTAAAATGCAAAGGCTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGACAGGGCAGCCTCCCTGCAAACAGTTCTCAGGAATGGGGTCTCTGCAGCACACCCTGCAGCCCCATaGCGGGATCCCTCGAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: GDRAASLQTVLRNGVSAAHPAAP*RDPSSP Trigger: GGGGCTCGAGGGATCCCGTCATGGGGCTGCAGGGTG...TGCTGCAGAGACCCCATTCCTGAGAACTGTTTGCAGGGAGGCTGCCCTGTCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGACAGGGCAGCCTCCCTGCAAACAGTTCTCAGGAATGGGGTCTCTGCAGCACGTGGACTGAAACTCTaGGAGATCAGGCCCCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: GDRAASLQTVLRNGVSAARGLKL*EIRPQC Trigger: GCACTGGGGCCTGATCTCCCAGAGTTTCAGTCCACG...TGCTGCAGAGACCCCATTCCTGAGAACTGTTTGCAGGGAGGCTGCCCTGTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGTCCAGCCAACGACCAGCTCCACCCTGCAGCCCCATGACGGGATCCCTCGAACTTTTGAGGATCTCTaGTCTCCAGTCACAGCAACT | + |
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Preference number: 2 (lower is better) Translates to: RVQPTTSSTLQPHDGIPRTFEDL*SPVTAT Trigger: AGTTGCTGTGACTGGAGAGCAGAGATCCTCAAAAGT...TCGAGGGATCCCGTCATGGGGCTGCAGGGTGGAGCTGGTCGTTGGCTGGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCAAACTCTCCCACAGCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTAGGCTGGCTTGGAGCTTaGAGTCCTCTTGTCTTACCT | + |
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Preference number: 2 (lower is better) Translates to: PSNSPTARGQCLSVGEELGWLGA*SPLVLP Trigger: AGGTAAGACAAGAGGACTGCAAGCTCCAAGCCAGCC...TAGCTCCTCCCCGACACTGAGACACTGACCTCTGGCTGTGGGAGAGTTTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTAGGGAAGAGATGGAGATTTCCCAGGCTGGCTTaGAGCTTGCAGTCCTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: TARGQCLSVGEELGKRWRFPRLA*SLQSSC Trigger: ACAAGAGGACTGCAAGCTCCAAGCCAGCCTGGGAAA...TCTCCATCTCTTCCCTAGCTCCTCCCCGACACTGAGACACTGACCTCTGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCAAACTCTCCCACAGCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTATGGAACACGACCACGTaGCACATTCTTCTGAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: PSNSPTARGQCLSVGEELWNTTT*HILLKD Trigger: GTCCTTCAGAAGAATGTGGCACGTGGTCGTGTTCCA...TAGCTCCTCCCCGACACTGAGACACTGACCTCTGGCTGTGGGAGAGTTTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGATTCTTAGGAGATGGCAGCTCACATTTCAGGGTTGAAGGTGCGGCTCCAGAGCCCCAGGGAATCTaGACGGGATGCTTAGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: SGFLGDGSSHFRVEGAAPEPQGI*TGCLGV Trigger: TACTCCTAAGCATCCCGTGCAGATTCCCTGGGGCTC...TGGAGCCGCACCTTCAACCCTGAAATGTGAGCTGCCATCTCCTAAGAATCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGACAGGGCAGCCTCCCTGCAAACAGTTCTCAGGAATGGGGTCTCTGCAGCATCTCAGAGTTCCAGCTaGATGGAATGGATGGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: GDRAASLQTVLRNGVSAASQSSS*MEWMVV Trigger: AACAACCATCCATTCCATCCAGCTGGAACTCTGAGA...TGCTGCAGAGACCCCATTCCTGAGAACTGTTTGCAGGGAGGCTGCCCTGTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CAA 90 bp | GTAAGAGCCTGTTGGGGTGACTCACTGCGATCTACATCACAGGGCTaGCTTTCGCAACCACTCTGCCCAGCATTGACTTTTGAGGATCTC | + |
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Preference number: 2 (lower is better) Translates to: VRACWGDSLRSTSQG*LSQPLCPALTFEDL Trigger: GAGATCCTCAAAAGTCAATGCTGGGCAGAGTGGTTGCGAAAGCAAGCCCTGTGATGTAGATCGCAGTGAGTCACCCCAACAGGCTCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCAAACTCTCCCACAGCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTAAAACGTGACAATGCCTaGTGCAGTCACCATTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: PSNSPTARGQCLSVGEELKRDNA*CSHHSF Trigger: GAAAGAATGGTGACTGCAGCAGGCATTGTCACGTTT...TAGCTCCTCCCCGACACTGAGACACTGACCTCTGGCTGTGGGAGAGTTTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTGGTCACCAGGGAGTGGTACTACTTGGAAGGATTGGGAAGTGTGGCCTTGTCTTCATGCTTCAGTTaGAGGGTCTCAGAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: CLVTREWYYLEGLGSVALSSCFS*RVSESR Trigger: TCTGCTCTCTGAGACCCTTCAACTGAAGCATGAAGA...CAAGGCCACACTTCCCAATCCTTCCAAGTAGTACCACTCCCTGGTGACCAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CAA 90 bp | CGATCTACATCACAGGGCTTGCTTTCGCAACCACTCTGCCCAGCATaGACTTTTGAGGATCTCTGCTCTCCAGTCACAGCAACTGATATG | + |
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Preference number: 2 (lower is better) Translates to: RSTSQGLLSQPLCPA*TFEDLCSPVTATDM Trigger: CATATCAGTTGCTGTGACTGGAGAGCAGAGATCCTCAAAAGTCAATGCTGGGCAGAGTGGTTGCGAAAGCAAGCCCTGTGATGTAGATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CAA 90 bp | AGAAGTGAATGCTTGGTCACCAGGGAGTGGTACTACTTGGAAGGATaGGGAAGTGTGGCCTTGCTGAAGGAAGTGTGTCAATGGGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: RSECLVTREWYYLEG*GSVALLKEVCQWGF Trigger: GAAACCCCATTGACACACTTCCTTCAGCAAGGCCACACTTCCCAATCCTTCCAAGTAGTACCACTCCCTGGTGACCAAGCATTCACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGACAGGGCAGCCTCCCTGCAAACAGTTCTCAGGAATGGGGTCTCTGCAGCAGTGACATGTCACATATaGAATGATGTGGAAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GDRAASLQTVLRNGVSAAVTCHI*NDVEKH Trigger: ATGCTTTTCCACATCATTTCATATGTGACATGTCAC...TGCTGCAGAGACCCCATTCCTGAGAACTGTTTGCAGGGAGGCTGCCCTGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCAAACTCTCCCACAGCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTAATGTCACATATGAAATaGTGTGGAAAAGCATCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PSNSPTARGQCLSVGEELMSHMK*CGKASA Trigger: AGCTGATGCTTTTCCACATCATTTCATATGTGACAT...TAGCTCCTCCCCGACACTGAGACACTGACCTCTGGCTGTGGGAGAGTTTGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR TCA 90 bp | TGCTTGGTCACCAGGGAGTGGTACTACTTGGAAGGATTGGGAAGTGTGGCCTTGATTCAAGGTTTTCCATaGCAACCACATAGACACGCA | + |
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Preference number: 2 (lower is better) Translates to: CLVTREWYYLEGLGSVALIQGFP*QPHRHA Trigger: TGCGTGTCTATGTGGTTGTCATGGAAAACCTTGAAT...CAAGGCCACACTTCCCAATCCTTCCAAGTAGTACCACTCCCTGGTGACCAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCAAACTCTCCCACAGCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTACCAGGCTTTTATTGCTaGACACTTAATGACAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: PSNSPTARGQCLSVGEELPGFYC*TLNDRK Trigger: TTTTCTGTCATTAAGTGTGCAGCAATAAAAGCCTGG...TAGCTCCTCCCCGACACTGAGACACTGACCTCTGGCTGTGGGAGAGTTTGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGAGACTGCTAAGTGCAATTAGAACATTACAAGCTTTGGGGCAGTTACCTCTGCCAGACCAAGGCTaGAAGGCTGCCAGGCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: QLRLLSAIRTLQALGQLPLPDQG*KAARLL Trigger: TAAAAGCCTGGCAGCCTTGCAGCCTTGGTCTGGCAG...AGGTAACTGCCCCAAAGCTTGTAATGTTCTAATTGCACTTAGCAGTCTCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CAA 90 bp | AGCAGCAATAAGAGGAAGCAAGAAGCACTCGGCTGGGAACGGTCGTaGCTCAGCATTAAAGAGAAAGTTCTCTACCCTTGTCTACCATAC | + |
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Preference number: 2 (lower is better) Translates to: SSNKRKQEALGWERS*LSIKEKVLYPCLPY Trigger: GTATGGTAGACAAGGGTAGAGAACTTTCTCTTTAATGCTGAGCAACGACCGTTCCCAGCCGAGTGCTTCTTGCTTCCTCTTATTGCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGAGACTGCTAAGTGCAATTAGAACATTACAAGCTTTGGGGCAGTTACCTCACCATTCTTTCCCCTaGACCACACGGTCCACCTTT | + |
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Preference number: 2 (lower is better) Translates to: QLRLLSAIRTLQALGQLPHHSFP*TTRSTF Trigger: AAAGGTGGACCGTGTGGTGCAGGGGAAAGAATGGTG...AGGTAACTGCCCCAAAGCTTGTAATGTTCTAATTGCACTTAGCAGTCTCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGGATTCTTAGGAGATGGCAGCTCACATTTCAGGGTTGAAGGTGCGGCTCCAATCACTTCCCCATTCTaGAGTATTTCTAAGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SGFLGDGSSHFRVEGAAPITSPF*SISKFP Trigger: GGGAAACTTAGAAATACTTCAGAATGGGGAAGTGAT...TGGAGCCGCACCTTCAACCCTGAAATGTGAGCTGCCATCTCCTAAGAATCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTACCTATAAAAAGGAGGCCAGAGAACCTGCTCAAAAACTTCAGCTAACACTAAGTTTCCCAGGCTaGCTTGGAGCTTGCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: ESTYKKEAREPAQKLQLTLSFPG*LGACSP Trigger: AGGACTGCAAGCTCCAAGCCAGCCTGGGAAACTTAG...TGTTAGCTGAAGTTTTTGAGCAGGTTCTCTGGCCTCCTTTTTATAGGTAGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGATTCTTAGGAGATGGCAGCTCACATTTCAGGGTTGAAGGTGCGGCTCCAACATATGAAATGATGTaGAAAAGCATCAGCTATGGG | + |
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Preference number: 2 (lower is better) Translates to: SGFLGDGSSHFRVEGAAPTYEMM*KSISYG Trigger: CCCATAGCTGATGCTTTTCCACATCATTTCATATGT...TGGAGCCGCACCTTCAACCCTGAAATGTGAGCTGCCATCTCCTAAGAATCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGATTCTTAGGAGATGGCAGCTCACATTTCAGGGTTGAAGGTGCGGCTCCAGACTCGCTGATTATGTaGTGTTTTGTAGGTTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: SGFLGDGSSHFRVEGAAPDSLIM*CFVGFV Trigger: AACAAAACCTACAAAACACCACATAATCAGCGAGTC...TGGAGCCGCACCTTCAACCCTGAAATGTGAGCTGCCATCTCCTAAGAATCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR GCA 90 bp | TATAAACACCTACAAACTCATATCTGGAACATCCATATTCACAGAGCCAAAGAGGTCATCCTCTCTTCCTaGTGCCTGTGGATCTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: YKHLQTHIWNIHIHRAKEVILSS*CLWIWV Trigger: CACCCAGATCCACAGGCAGCAGGAAGAGAGGATGAC...CTCTTTGGCTCTGTGAATATGGATGTTCCAGATATGAGTTTGTAGGTGTTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR TCA 90 bp | TATAAACACCTACAAACTCATATCTGGAACATCCATATTCACAGAGCCAAAGAGGAAGTGTGGCCTTGCTaGAGGAAGTGTGTCAATGGG | + |
|
Preference number: 2 (lower is better) Translates to: YKHLQTHIWNIHIHRAKEEVWPC*RKCVNG Trigger: CCCATTGACACACTTCCTTCAGCAAGGCCACACTTC...CTCTTTGGCTCTGTGAATATGGATGTTCCAGATATGAGTTTGTAGGTGTTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR TCA 90 bp | TATAAACACCTACAAACTCATATCTGGAACATCCATATTCACAGAGCCAAAGAGACAGGCTCAGAGAAGTaGATGCTTGGTCACCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: YKHLQTHIWNIHIHRAKETGSEK*MLGHQG Trigger: TCCCTGGTGACCAAGCATTCACTTCTCTGAGCCTGT...CTCTTTGGCTCTGTGAATATGGATGTTCCAGATATGAGTTTGTAGGTGTTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTGAGACTGCTAAGTGCAATTAGAACATTACAAGCTTTGGGGCAGTTACCTCTGCCAGGCTTTTATTaGTGCACACTTAATGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: QLRLLSAIRTLQALGQLPLPGFY*CTLNDR Trigger: TCTGTCATTAAGTGTGCAGCAATAAAAGCCTGGCAG...AGGTAACTGCCCCAAAGCTTGTAATGTTCTAATTGCACTTAGCAGTCTCAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR GCA 90 bp | TATAAACACCTACAAACTCATATCTGGAACATCCATATTCACAGAGCCAAAGAGTCCTCTTGTCTTACCTaGCCAGGTAAGGTGTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: YKHLQTHIWNIHIHRAKESSCLT*PGKVCP Trigger: GGGACACACCTTACCTGGGCAGGTAAGACAAGAGGA...CTCTTTGGCTCTGTGAATATGGATGTTCCAGATATGAGTTTGTAGGTGTTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR TCA 90 bp | TATAAACACCTACAAACTCATATCTGGAACATCCATATTCACAGAGCCAAAGAGCACTCTGCCCAGCATTaGCTTTTGAGGATCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: YKHLQTHIWNIHIHRAKEHSAQH*LLRISA Trigger: AGCAGAGATCCTCAAAAGTCAATGCTGGGCAGAGTG...CTCTTTGGCTCTGTGAATATGGATGTTCCAGATATGAGTTTGTAGGTGTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGTCTACCTATAAAAAGGAGGCCAGAGAACCTGCTCAAAAACTTCAGCTAACATTTCAAAAGGAAATCTaGCTTCAGGGGCCATGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: ESTYKKEAREPAQKLQLTFQKEI*LQGPCL Trigger: TAAGCATGGCCCCTGAAGTCAGATTTCCTTTTGAAA...TGTTAGCTGAAGTTTTTGAGCAGGTTCTCTGGCCTCCTTTTTATAGGTAGACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR CCA 90 bp | TATAAACACCTACAAACTCATATCTGGAACATCCATATTCACAGAGCCAAAGAGAGGAAGCTTCCGTTCTaGCCAGAAATCCCAATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YKHLQTHIWNIHIHRAKERKLPF*PEIPMP Trigger: TGGCATTGGGATTTCTGGCCAGAACGGAAGCTTCCT...CTCTTTGGCTCTGTGAATATGGATGTTCCAGATATGAGTTTGTAGGTGTTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTGTGCGTTTGTTCCATTTTCCCTCGGTATGTACAGTCCTTTAGCATCAGTTTCCTTTATAGTAGGATaGAAAGCTTGGAGAGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SCAFVPFSLGMYSPLASVSFIVG*KAWRGN Trigger: ATTTCCTCTCCAAGCTTTTCATCCTACTATAAAGGA...AACTGATGCTAAAGGACTGTACATACCGAGGGAAAATGGAACAAACGCACAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022590.5 |
||
| 3UTR-3UTR TCA 90 bp | GAAAATTTTGACATTAAGGATCTGGGTGAGTCATCTCTTCCCACAAACATCATTCGTGCCACATTCTTCTaGAGGACTTTTACAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: ENFDIKDLGESSLPTNIIRATFF*RTFTAV Trigger: CACAGCTGTAAAAGTCCTTCAGAAGAATGTGGCACG...AATGATGTTTGTGGGAAGAGATGACTCACCCAGATCCTTAATGTCAAAATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGGATCTGGGTGAGTCATCTCTTCCCACAAACATCATTAAACTATTTTAAGCCCAGCATTGACTTTTaGGGATCTCTGCTCTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LRIWVSHLFPQTSLNYFKPSIDF*GSLLSS Trigger: ACTGGAGAGCAGAGATCCTCAAAAGTCAATGCTGGG...CTTAAAATAGTTTAATGATGTTTGTGGGAAGAGATGACTCACCCAGATCCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCTGTGCGTTTGTTCCATTTTCCCTCGGTATGTACAGTCCTTTAGCATCAGTTCATAATTCTCTTGTGTaGTGTTCTAATCTTGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SCAFVPFSLGMYSPLASVHNSLV*CSNLGL Trigger: AAGGCCAAGATTAGAACAGCACACAAGAGAATTATG...AACTGATGCTAAAGGACTGTACATACCGAGGGAAAATGGAACAAACGCACAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022590.5 |
||
| 3UTR-3UTR GCA 90 bp | GAAAATTTTGACATTAAGGATCTGGGTGAGTCATCTCTTCCCACAAACATCATTAGCATGATTCTATTCTaGACCCTTCCTGCAGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: ENFDIKDLGESSLPTNIISMILF*TLPAVV Trigger: GACCACTGCAGGAAGGGTGCAGAATAGAATCATGCT...AATGATGTTTGTGGGAAGAGATGACTCACCCAGATCCTTAATGTCAAAATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR GCA 90 bp | TATAAACACCTACAAACTCATATCTGGAACATCCATATTCACAGAGCCAAAGAGGGTTTCAAAAGCCCATaGCAATCCCAGTGTCATCCT | + |
|
Preference number: 2 (lower is better) Translates to: YKHLQTHIWNIHIHRAKEGFKSP*QSQCHP Trigger: AGGATGACACTGGGATTGGCATGGGCTTTTGAAACC...CTCTTTGGCTCTGTGAATATGGATGTTCCAGATATGAGTTTGTAGGTGTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTGAGACTGCTAAGTGCAATTAGAACATTACAAGCTTTGGGGCAGTTACCTTATAATATTAGTTTGTaGGGCTGGAGAGATAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: QLRLLSAIRTLQALGQLPYNISL*GWRDSS Trigger: TGAGCTATCTCTCCAGCCCCACAAACTAATATTATA...AGGTAACTGCCCCAAAGCTTGTAATGTTCTAATTGCACTTAGCAGTCTCAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAATTTTGACATTAAGGATCTGGGTGAGTCATCTCTTCCCACAAACATCATTCAGGAGAAACAATACTaGCTCGCTGATTATGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ENFDIKDLGESSLPTNIIQEKQY*LADYVV Trigger: CACCACATAATCAGCGAGTCAGTATTGTTTCTCCTG...AATGATGTTTGTGGGAAGAGATGACTCACCCAGATCCTTAATGTCAAAATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR CCA 90 bp | TATAAACACCTACAAACTCATATCTGGAACATCCATATTCACAGAGCCAAAGAGTGGATTCTTAGGAGATaGCAGCTCACATTTCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: YKHLQTHIWNIHIHRAKEWILRR*QLTFQG Trigger: ACCCTGAAATGTGAGCTGCCATCTCCTAAGAATCCA...CTCTTTGGCTCTGTGAATATGGATGTTCCAGATATGAGTTTGTAGGTGTTTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR CCA 90 bp | GCGTTTGTTCCATTTTCCCTCGGTATGTACAGTCCTTTAGCATCAGTTAGCTTTCCACCTTTGTCTGGATaGTTTAAAATCATAATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: AFVPFSLGMYSPLASVSFPPLSG*FKIIIL Trigger: GAGAATTATGATTTTAAACCATCCAGACAAAGGTGG...AAAGCTAACTGATGCTAAAGGACTGTACATACCGAGGGAAAATGGAACAAACGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022590.5 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGGATCTGGGTGAGTCATCTCTTCCCACAAACATCATTAAACTATTTTAAGTCCAGCTGGATGGAATaGATGGTTGTTACTTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LRIWVSHLFPQTSLNYFKSSWME*MVVTSV Trigger: AACAGAAGTAACAACCATCCATTCCATCCAGCTGGA...CTTAAAATAGTTTAATGATGTTTGTGGGAAGAGATGACTCACCCAGATCCTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR TCA 72 bp | GGTCCAGCCAACGACCAGCTCCACCCTGCAGCCCCATaGCGGGATCCCTCGAGCCCCAGGGAATCTGCACGG | + |
|
Preference number: 3 (lower is better) Translates to: GPANDQLHPAAP*RDPSSPRESAR Trigger: CCGTGCAGATTCCCTGGGGCTCGAGGGATCCCGTCATGGGGCTGCAGGGTGGAGCTGGTCGTTGGCTGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | ACACTTCCCACAGTGACGGTGACAGGGCAGCCTCCCTaGAAACAGTTCTCAGGAATGGGGTCTCTGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: TLPTVTVTGQPP*KQFSGMGSLQH Trigger: GTGCTGCAGAGACCCCATTCCTGAGAACTGTTTGCAGGGAGGCTGCCCTGTCACCGTCACTGTGGGAAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | CTCTCAGCTCCTTCCTTCTCCAGCACCATGTCAGCCTaGAGGCCACCACGCGTGTCACCACGATGGACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSAPSFSSTMSA*RPPRVSPRWTK Trigger: TTTAGTCCATCGTGGTGACACGCGTGGTGGCCTGCAGGCTGACATGGTGCTGGAGAAGGAAGGAGCTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR CCA 72 bp | CAGTGTCTCAGTGTCGGGGAGGAGCTAGGGAAGAGATaGAGACAGCAGCACACACTTCCCACAGTGACGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QCLSVGEELGKR*RQQHTLPTVTV Trigger: CACCGTCACTGTGGGAAGTGTGTGCTGCTGTCTCCATCTCTTCCCTAGCTCCTCCCCGACACTGAGACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR TCA 72 bp | TGGATTCTTAGGAGATGGCAGCTCACATTTCAGGGTTaGAGGTGCGGCTCCACGCTGCTGACCCGAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: WILRRWQLTFQG*RCGSTLLTRAQ Trigger: CTGTGCTCGGGTCAGCAGCGTGGAGCCGCACCTTCAACCCTGAAATGTGAGCTGCCATCTCCTAAGAATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR TCA 72 bp | GAGCCCCAGGGAATCTGCACGGGATGCTTAGGAGTATaGCCACTGAATCTGTCACACCCAAAGCAGAGTCCG | + |
|
Preference number: 3 (lower is better) Translates to: EPQGICTGCLGV*PLNLSHPKQSP Trigger: CGGACTCTGCTTTGGGTGTGACAGATTCAGTGGTCATACTCCTAAGCATCCCGTGCAGATTCCCTGGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTAGGGAAGAGATGGAGAGTCTTCATGCTTCAGTaGAAGGGTCTCAGAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TARGQCLSVGEELGKRWRVFMLQ*KGLREQ Trigger: CTGCTCTCTGAGACCCTTCAACTGAAGCATGAAGAC...TCTCCATCTCTTCCCTAGCTCCTCCCCGACACTGAGACACTGACCTCTGGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR TCA 72 bp | CACAGGGCTTGCTTTCGCAACCACTCTGCCCAGCATTaGCTTTTGAGGATCTCTGCTCTCCAGTCACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HRACFRNHSAQH*LLRISALQSQQ Trigger: TTGCTGTGACTGGAGAGCAGAGATCCTCAAAAGTCAATGCTGGGCAGAGTGGTTGCGAAAGCAAGCCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR TCA 72 bp | AAAGAGCAGCCCCCATTTCCTGTCTTCTGCTGTGGATaGGCGTTCTCTTGCAGCTCTGTGCAGAAGCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: KEQPPFPVFCCG*AFSCSSVQKPI Trigger: TATGGGCTTCTGCACAGAGCTGCAAGAGAACGCTCATCCACAGCAGAAGACAGGAAATGGGGGCTGCTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | AGGCTGGCTTGGAGCTTGCAGTCCTCTTGTCTTACCTaGCCAGGTAAGGTGTGTCCCATCACATCTATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RLAWSLQSSCLT*PGKVCPITSIA Trigger: AGCAATAGATGTGATGGGACACACCTTACCTGGGCAGGTAAGACAAGAGGACTGCAAGCTCCAAGCCAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR CCA 72 bp | ATGAAAAGAGCAGCCCCCATTTCCTGTCTTCTGCTGTaGATGAGCGTTCTCTTGCAGCTCTGTGCAGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: MKRAAPISCLLL*MSVLLQLCAEA Trigger: GGCTTCTGCACAGAGCTGCAAGAGAACGCTCATCCACAGCAGAAGACAGGAAATGGGGGCTGCTCTTTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATCAAACTCTCCCACAGCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTATTTACAGCTGTGCGTTaGTTCCATTTTCCCTCGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PSNSPTARGQCLSVGEELFTAVR*FHFPSV Trigger: TACCGAGGGAAAATGGAACAAACGCACAGCTGTAAA...TAGCTCCTCCCCGACACTGAGACACTGACCTCTGGCTGTGGGAGAGTTTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR TCA 72 bp | GAAGACAGCCTGAATAGCCAAGTATCAGGAAGCCAGTaGACGGAGCCGACTTCAGACCCATGTGGGGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: EDSLNSQVSGSQ*TEPTSDPCGVN Trigger: ATTAACCCCACATGGGTCTGAAGTCGGCTCCGTTCACTGGCTTCCTGATACTTGGCTATTCAGGCTGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | ACGGATGAAGTCCCTGCCAGACCAAGGCTGCAAGGCTaGCAGGCTTTTATTGCTGCACACTTAATGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: TDEVPARPRLQG*QAFIAAHLMTE Trigger: TTCTGTCATTAAGTGTGCAGCAATAAAAGCCTGGCAGCCTTGCAGCCTTGGTCTGGCAGGGACTTCATCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | CTGAAGGAAGTGTGTCAATGGGGTTTCAAAAGCCCATaGCAATCCCAGTGTCATCCTCTCTTCCTGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LKEVCQWGFKSP*QSQCHPLFLLP Trigger: AGGCAGCAGGAAGAGAGGATGACACTGGGATTGGCATGGGCTTTTGAAACCCCATTGACACACTTCCTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | GTACAACATCTCAGAACAGCCCAGGAGAGGCAGCAATaGACAGACTCTCCTAGCTCACCACCAAGTACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VQHLRTAQERQQ*TDSPSSPPSTN Trigger: GTTTGTACTTGGTGGTGAGCTAGGAGAGTCTGTGCATTGCTGCCTCTCCTGGGCTGTTCTGAGATGTTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR CCA 72 bp | ATTACTGAACCACATTTACCCCAAATGGCAGTCACGTaGACTGAAACTCTGGGAGATCAGGCCCCAGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ITEPHLPQMAVT*TETLGDQAPVP Trigger: AGGCACTGGGGCCTGATCTCCCAGAGTTTCAGTCCACGTGACTGCCATTTGGGGTAAATGTGGTTCAGTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | TGCCAGACCAAGGCTGCAAGGCTGCCAGGCTTTTATTaGTGCACACTTAATGACAGAAAACAGACTGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CQTKAARLPGFY*CTLNDRKQTGS Trigger: TGACCCAGTCTGTTTTCTGTCATTAAGTGTGCAGCAATAAAAGCCTGGCAGCCTTGCAGCCTTGGTCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | AGAGATACCAAGGGCTCCCCTATGAATCATGGAGTATaGACAAGTGATGCCTCCATAGATTCCAGACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RDTKGSPMNHGV*TSDASIDSRPR Trigger: CCTGGGTCTGGAATCTATGGAGGCATCACTTGTGCATACTCCATGATTCATAGGGGAGCCCTTGGTATCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | GAAGTATTTCTAAGTTTCCCAGGCTGGCTTGGAGCTTaGAGTCCTCTTGTCTTACCTGCCCAGGTAAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: EVFLSFPGWLGA*SPLVLPAQVRC Trigger: ACACCTTACCTGGGCAGGTAAGACAAGAGGACTGCAAGCTCCAAGCCAGCCTGGGAAACTTAGAAATACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | AGAGGAAGCAAGAAGCACTCGGCTGGGAACGGTCGTTaGTCAGCATTAAAGAGAAAGTTCTCTACCCTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RGSKKHSAGNGR*SALKRKFSTLV Trigger: GACAAGGGTAGAGAACTTTCTCTTTAATGCTGAGCAACGACCGTTCCCAGCCGAGTGCTTCTTGCTTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR CCA 72 bp | TTGGGAAGTGTGGCCTTGCTGAAGGAAGTGTGTCAATaGGGTTTCAAAAGCCCATGCCAATCCCAGTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LGSVALLKEVCQ*GFKSPCQSQCH Trigger: ATGACACTGGGATTGGCATGGGCTTTTGAAACCCCATTGACACACTTCCTTCAGCAAGGCCACACTTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | CAGACCAAGGCTGCAAGGCTGCCAGGCTTTTATTGCTaGACACTTAATGACAGAAAACAGACTGGGTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: QTKAARLPGFYC*TLNDRKQTGSV Trigger: TACTGACCCAGTCTGTTTTCTGTCATTAAGTGTGCAGCAATAAAAGCCTGGCAGCCTTGCAGCCTTGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | GGCTGGAGAGATAGCTCAGGGATTAATAGCACTTGTTaGTTTTGTAGAGGACCCGAGTTTGGTTCCCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: GWRDSSGINSTC*FCRGPEFGSHH Trigger: GTGATGGGAACCAAACTCGGGTCCTCTACAAAAGCAACAAGTGCTATTAATCCCTGAGCTATCTCTCCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR CCA 72 bp | TGCACACTTAATGACAGAAAACAGACTGGGTCAGTATaGAACACGACCACGTGCCACATTCTTCTGAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: CTLNDRKQTGSV*NTTTCHILLKD Trigger: GTCCTTCAGAAGAATGTGGCACGTGGTCGTGTTCCATACTGACCCAGTCTGTTTTCTGTCATTAAGTGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR CCA 72 bp | CCTTGTGCTCTCAGAGTTCCAGCTGGATGGAATGGATaGTTGTTACTTCTGTTGTATCACTTCCCCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PCALRVPAGWNG*LLLLLYHFPIL Trigger: CAGAATGGGGAAGTGATACAACAGAAGTAACAACCATCCATTCCATCCAGCTGGAACTCTGAGAGCACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR TCA 72 bp | AGGGGCAGAGAGAGGGTTAGACTACCATCACCAAGGTaGCATGTCACATATGAAATGATGTGGAAAAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: RGRERVRLPSPR*HVTYEMMWKSI Trigger: GATGCTTTTCCACATCATTTCATATGTGACATGTCACCTTGGTGATGGTAGTCTAACCCTCTCTCTGCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | CAACCACTCTGCCCAGCATTGACTTTTGAGGATCTCTaGTCTCCAGTCACAGCAACTGATATGTCTATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QPLCPALTFEDL*SPVTATDMSIS Trigger: AGAAATAGACATATCAGTTGCTGTGACTGGAGAGCAGAGATCCTCAAAAGTCAATGCTGGGCAGAGTGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | CAATCCACCGTTAACAGCTCTACAAAAGAACCCAGCTaGCTAAGCTCTCTTCAGGTTTCAGTTCTCACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: QSTVNSSTKEPS*LSSLQVSVLTL Trigger: TAGAGTGAGAACTGAAACCTGAAGAGAGCTTAGGCAGCTGGGTTCTTTTGTAGAGCTGTTAACGGTGGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR GCA 72 bp | GTGGGGTTAATTATGAAGGCTGTTTCTGTGTGTTCATaGTGCTCTTCTGCAACACTGCCCTGTACAACATCT | + |
|
Preference number: 3 (lower is better) Translates to: VGLIMKAVSVCS*CSSATLPCTTS Trigger: AGATGTTGTACAGGGCAGTGTTGCAGAAGAGCAGCATGAACACACAGAAACAGCCTTCATAATTAACCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
||
| 3UTR CCA 72 bp | CATCACAGACCTTGTGCTCTCAGAGTTCCAGCTGGATaGAATGGATGGTTGTTACTTCTGTTGTATCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: HHRPCALRVPAG*NGWLLLLLYHF Trigger: GAAGTGATACAACAGAAGTAACAACCATCCATTCCATCCAGCTGGAACTCTGAGAGCACAAGGTCTGTGATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 72 bp | TGCACCCTTCCTGCAGTGGTCAAACTCAGTACCAAGTaGAACGTTTTAAATGTTGTTCGAACAAAGTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: CTLPAVVKLSTK*NVLNVVRTKCR Trigger: CCTGCACTTTGTTCGAACAACATTTAAAACGTTTCACTTGGTACTGAGTTTGACCACTGCAGGAAGGGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CCA 72 bp | GATTCATCACAGACCTTGTGCTCTCAGAGTTCCAGCTaGATGGAATGGATGGTTGTTACTTCTGTTGTATCA | + |
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Preference number: 3 (lower is better) Translates to: DSSQTLCSQSSS*MEWMVVTSVVS Trigger: TGATACAACAGAAGTAACAACCATCCATTCCATCCAGCTGGAACTCTGAGAGCACAAGGTCTGTGATGAATC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAATTTTGACATTAAGGATCTGGGTGAGTCATCTCTTCCCACAAACATCATTCCACTCTGCCCAGCATaGACTTTTGAGGATCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: ENFDIKDLGESSLPTNIIPLCPA*TFEDLC Trigger: GCAGAGATCCTCAAAAGTCAATGCTGGGCAGAGTGG...AATGATGTTTGTGGGAAGAGATGACTCACCCAGATCCTTAATGTCAAAATTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 72 bp | CACACTCATGATCCAGGTCACAAGAACAAGCTAGAATaGTGCAAACTCCATCATCTGACTCCTTCCAACATA | + |
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Preference number: 3 (lower is better) Translates to: HTHDPGHKNKLE*CKLHHLTPSNI Trigger: TATGTTGGAAGGAGTCAGATGATGGAGTTTGCATCATTCTAGCTTGTTCTTGTGACCTGGATCATGAGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 72 bp | CAAACTCCATCATCTGACTCCTTCCAACATACCTGGTaGATTGCTTCAGGATTGAGACAAACTACATTGAGA | + |
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Preference number: 3 (lower is better) Translates to: QTPSSDSFQHTW*IASGLRQTTLR Trigger: TCTCAATGTAGTTTGTCTCAATCCTGAAGCAATGCACCAGGTATGTTGGAAGGAGTCAGATGATGGAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAATTTTGACATTAAGGATCTGGGTGAGTCATCTCTTCCCACAAACATCATTGATTCATCACAGACCTaGTGCTCTCAGAGTTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: ENFDIKDLGESSLPTNIIDSSQT*CSQSSS Trigger: GCTGGAACTCTGAGAGCACAAGGTCTGTGATGAATC...AATGATGTTTGTGGGAAGAGATGACTCACCCAGATCCTTAATGTCAAAATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 72 bp | AACTGTAAGCCAGCCTCAGTGAAATGTTTTCTTTCATaGGTTGCTATGGTCACGGTGTCTCTTTATAGCAAC | + |
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Preference number: 3 (lower is better) Translates to: NCKPASVKCFLS*VAMVTVSLYSN Trigger: GTTGCTATAAAGAGACACCGTGACCATAGCAACTCATGAAAGAAAACATTTCACTGAGGCTGGCTTACAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 72 bp | TATTTCTGCTCACTCCGATCTCAGGAGAAACAATACTaGCTCGCTGATTATGTGGTGTTTTGTAGGTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: YFCSLRSQEKQY*LADYVVFCRFC Trigger: ACAAAACCTACAAAACACCACATAATCAGCGAGTCAGTATTGTTTCTCCTGAGATCGGAGTGAGCAGAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR GCA 72 bp | TTGCATTTTAAGCATGATTCTATTCTGCACCCTTCCTaGAGTGGTCAAACTCAGTACCAAGTGAAACGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LHFKHDSILHPS*SGQTQYQVKRF Trigger: AAAACGTTTCACTTGGTACTGAGTTTGACCACTGCAGGAAGGGTGCAGAATAGAATCATGCTTAAAATGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR CAA 90 bp | TATAAACACCTACAAACTCATATCTGGAACATCCATATTCACAGAGCCAAAGAGTTAAAGGCTTTGGCATaGGCAGAGTCCCAAATTCTT | + |
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Preference number: 3 (lower is better) Translates to: YKHLQTHIWNIHIHRAKELKALA*AESQIL Trigger: AAGAATTTGGGACTCTGCCAATGCCAAAGCCTTTAA...CTCTTTGGCTCTGTGAATATGGATGTTCCAGATATGAGTTTGTAGGTGTTTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAATTTTGACATTAAGGATCTGGGTGAGTCATCTCTTCCCACAAACATCATTGGTCCACCTTTTACATaGTATTGTAGATTGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: ENFDIKDLGESSLPTNIIGPPFT*YCRLAE Trigger: CTCTGCCAATCTACAATACAATGTAAAAGGTGGACC...AATGATGTTTGTGGGAAGAGATGACTCACCCAGATCCTTAATGTCAAAATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 72 bp | CTAACTCTCAAGAGCTCATGTTTTTGCTATGAATACTaGAACCATTTCATCCTTTGGTTATCACTGCTACCG | + |
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Preference number: 3 (lower is better) Translates to: LTLKSSCFCYEY*NHFILWLSLLP Trigger: CGGTAGCAGTGATAACCAAAGGATGAAATGGTTTCAGTATTCATAGCAAAAACATGAGCTCTTGAGAGTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR TCA 72 bp | AGTGCACCTAACTCTCAAGAGCTCATGTTTTTGCTATaGATACTGAAACCATTTCATCCTTTGGTTATCACT | + |
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Preference number: 3 (lower is better) Translates to: SAPNSQELMFLL*ILKPFHPLVIT Trigger: AGTGATAACCAAAGGATGAAATGGTTTCAGTATTCATAGCAAAAACATGAGCTCTTGAGAGTTAGGTGCACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| CDS-3UTR GCA 90 bp | CCATCAAACTCTCCCACAGCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTATTTCCAGATCTGAAATaGATAGCGACCTGCAAATGC | + |
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Preference number: 4 (lower is better) Translates to: PSNSPTARGQCLSVGEELFPDLK*IATCKC Trigger: GCATTTGCAGGTCGCTATGCATTTCAGATCTGGAAA...TAGCTCCTCCCCGACACTGAGACACTGACCTCTGGCTGTGGGAGAGTTTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CAA 72 bp | TGCTTGGTCACCAGGGAGTGGTACTACTTGGAAGGATaGGGAAGTGTGGCCTTGCTGAAGGAAGTGTGTCAA | + |
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Preference number: 4 (lower is better) Translates to: CLVTREWYYLEG*GSVALLKEVCQ Trigger: TTGACACACTTCCTTCAGCAAGGCCACACTTCCCAATCCTTCCAAGTAGTACCACTCCCTGGTGACCAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| CDS-3UTR GCA 90 bp | ACAGCCAGAGGTCAGTGTCTCAGTGTCGGGGAGGAGCTAGGGAAGAGATGGAGACATAATTCTCTTGTGTaGTGTTCTAATCTTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TARGQCLSVGEELGKRWRHNSLV*CSNLGL Trigger: AAGGCCAAGATTAGAACAGCACACAAGAGAATTATG...TCTCCATCTCTTCCCTAGCTCCTCCCCGACACTGAGACACTGACCTCTGGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CAA 72 bp | AAGAGGAAGCAAGAAGCACTCGGCTGGGAACGGTCGTaGCTCAGCATTAAAGAGAAAGTTCTCTACCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KRKQEALGWERS*LSIKEKVLYPC Trigger: ACAAGGGTAGAGAACTTTCTCTTTAATGCTGAGCAACGACCGTTCCCAGCCGAGTGCTTCTTGCTTCCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CAA 72 bp | TTAATAGCACTTGTTGCTTTTGTAGAGGACCCGAGTTaGGTTCCCATCACCTGCATGGTAGCTCACAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LIALVAFVEDPS*VPITCMVAHSH Trigger: ATGACTGTGAGCTACCATGCAGGTGATGGGAACCAAACTCGGGTCCTCTACAAAAGCAACAAGTGCTATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| CDS-3UTR GCA 90 bp | TTAGCATCAGTTAGCTTTGCTGGATGCTTCGAGCAAATCTTTTGCTTCATTTATTTTCCAGATCTGAAATaGATAGCGACCGCTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LASVSFAGCFEQIFCFIYFPDLK*IATAVW Trigger: CCACACAGCGGTCGCTATGCATTTCAGATCTGGAAA...ATAAATGAAGCAAAAGATTTGCTCGAAGCATCCAGCAAAGCTAACTGATGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022590.5 |
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| CDS-3UTR TCA 90 bp | GAGTCTACCTATAAAAAGGAGGCCAGAGAACCTGCTCAAAAACTTCAGCTAACATCCTTTATAGTAGGATaGAAAGCTTGGAGAGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: ESTYKKEAREPAQKLQLTSFIVG*KAWRGN Trigger: ATTTCCTCTCCAAGCTTTTCATCCTACTATAAAGGA...TGTTAGCTGAAGTTTTTGAGCAGGTTCTCTGGCCTCCTTTTTATAGGTAGACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| 3UTR CAA 72 bp | AGTAGTCACTGTTTGGTCTCAAAATATTTAAAGGCTTaGGCATTGGCAGAGTCCCAAATTCTTCTAAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SSHCLVSKYLKA*ALAESQILLKQ Trigger: TTGCTTTAGAAGAATTTGGGACTCTGCCAATGCCAAAGCCTTTAAATATTTTGAGACCAAACAGTGACTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| CDS-3UTR CCA 90 bp | TATAAACACCTACAAACTCATATCTGGAACATCCATATTCACAGAGCCAAAGAGCCACCTTTGTCTGGATaGTTTAAAATCATAATTCTC | + |
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Preference number: 4 (lower is better) Translates to: YKHLQTHIWNIHIHRAKEPPLSG*FKIIIL Trigger: GAGAATTATGATTTTAAACCATCCAGACAAAGGTGG...CTCTTTGGCTCTGTGAATATGGATGTTCCAGATATGAGTTTGTAGGTGTTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| CDS-3UTR CAA 90 bp | GCGTTTGTTCCATTTTCCCTCGGTATGTACAGTCCTTTAGCATCAGTTAGCTTTGTCGGCGTCCGACCTTaGGGCAGAAGGAGGCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: AFVPFSLGMYSPLASVSFVGVRP*GRRRQV Trigger: TACCTGCCTCCTTCTGCCCAAAGGTCGGACGCCGAC...AAAGCTAACTGATGCTAAAGGACTGTACATACCGAGGGAAAATGGAACAAACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022590.5 |
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| CDS-3UTR CAA 90 bp | TTAAGGATCTGGGTGAGTCATCTCTTCCCACAAACATCATTAAACTATTTTAAGGTCGGCGTCCGACCTTaGGGCAGAAGGAGGCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: LRIWVSHLFPQTSLNYFKVGVRP*GRRRQV Trigger: TACCTGCCTCCTTCTGCCCAAAGGTCGGACGCCGAC...CTTAAAATAGTTTAATGATGTTTGTGGGAAGAGATGACTCACCCAGATCCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| CDS CCA 72 bp | CCTAGTCCTACAGCTAGCAACCTTCTCCCCGCTGTGTaGTCGATGTCGGCGTCCGACCTTTGGGCAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: PSPTASNLLPAV*SMSASDLWAEG Trigger: TCCTTCTGCCCAAAGGTCGGACGCCGACATCGACCACACAGCGGGGAGAAGGTTGCTAGCTGTAGGACTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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| CDS CCA 72 bp | AGGTTTCCAGATCTGAAATGCATAGCGACCGCTGTGTaGTCGATGTCGGCGTCCGACCTTTGGGCAGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: RFPDLKCIATAV*SMSASDLWAEG Trigger: TCCTTCTGCCCAAAGGTCGGACGCCGACATCGACCACACAGCGGTCGCTATGCATTTCAGATCTGGAAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022590.5 |
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| CDS TCA 72 bp | AAAAGCTTGGAGAGGAAATCTTCCTTGCTGTTGCCGTaGTTACTTGTTCTAGAGGTTTCCAGATCTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: KSLERKSSLLLP*LLVLEVSRSEM Trigger: CATTTCAGATCTGGAAACCTCTAGAACAAGTAATCACGGCAACAGCAAGGAAGATTTCCTCTCCAAGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226459.2 |
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