Pregenerated sensors for DNAJC10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027006Ensembl transcript IDs: ENSMUST00000028392.8
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAACACAGAACCATATGTGGACTGCAGTCTCAGATGGCGCTGCCTaGCTCTCCAGGAAGCATGTGCAGCCCACAGTGCCGCACAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: TTQNHMWTAVSDGAA*LSRKHVQPTVPHRS Trigger: GCTCCTGTGCGGCACTGTGGGCTGCACATGCTTCCTGGAGAGCCAGGCAGCGCCATCTGAGACTGCAGTCCACATATGGTTCTGTGTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR CCA 90 bp | CAACAAAGACACAACACAGAACCATATGTGGACTGCAGTCTCAGATaGCGCTGCCTGGCTCTCCAGGAAGCATGTGCAGCCCACAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: QQRHNTEPYVDCSLR*RCLALQEACAAHSA Trigger: GGCACTGTGGGCTGCACATGCTTCCTGGAGAGCCAGGCAGCGCCATCTGAGACTGCAGTCCACATATGGTTCTGTGTTGTGTCTTTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR GCA 90 bp | AAAACCCAAGTCTACTTTGTACAGTCTGAAGGTAACAGAGCCACGTaGAGGGCCAGGTGTCCAAACATCAGTTCTGGGGTCAGCAAACTA | + |
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Preference number: 1 (lower is better) Translates to: KTQVYFVQSEGNRAT*RARCPNISSGVSKL Trigger: TAGTTTGCTGACCCCAGAACTGATGTTTGGACACCTGGCCCTGCACGTGGCTCTGTTACCTTCAGACTGTACAAAGTAGACTTGGGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR GCA 90 bp | ACTAAACACAGGCTTAGACCTGTGACAGCCACACAGCCCATCAACTaGTGTAAATACTTCTTCTTACCTTGTTCCTGGGACAGCAGCTTA | + |
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Preference number: 1 (lower is better) Translates to: TKHRLRPVTATQPIN*CKYFFLPCSWDSSL Trigger: TAAGCTGCTGTCCCAGGAACAAGGTAAGAAGAAGTATTTACAGCAGTTGATGGGCTGTGTGGCTGTCACAGGTCTAAGCCTGTGTTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR TCA 90 bp | AGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTTCTATATGGCCCTaGGCTAAGACTGATGTGTGTATTTCTAAAAGGATTAACAACAAC | + |
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Preference number: 1 (lower is better) Translates to: SPWAGLGLWSISIWP*AKTDVCISKRINNN Trigger: GTTGTTGTTAATCCTTTTAGAAATACACACATCAGTCTTAGCTCAGGGCCATATAGAAATACTCCACAGGCCAAGTCCAGCCCAGGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR TCA 90 bp | TTTGGAGTTGCAGCAGGGACCTGTGACCCTCTGAGTCTAAACAACTaGGAAATGGGAAGAGTCCATTGTGTGCTTGATTTTAGTAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: FGVAAGTCDPLSLNN*EMGRVHCVLDFSKK Trigger: CTTTTTACTAAAATCAAGCACACAATGGACTCTTCCCATTTCTCAGTTGTTTAGACTCAGAGGGTCACAGGTCCCTGCTGCAACTCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR TCA 90 bp | AACAGAGAACCCAGAAGGGAAATATGTCAATATCAGGAAGACACGTaGAACAAAACCAACAAAACCATCAGTAGGAACATTTATGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: NREPRREICQYQEDT*NKTNKTISRNIYES Trigger: GCTTTCATAAATGTTCCTACTGATGGTTTTGTTGGTTTTGTTTCACGTGTCTTCCTGATATTGACATATTTCCCTTCTGGGTTCTCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR CAA 90 bp | CCAAACATCAGTTCTGGGGTCAGCAAACTAGTCCCTGGGCTGGACTaGGCCTGTGGAGTATTTCTATATGGCCCTGAGCTAAGACTGATG | + |
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Preference number: 2 (lower is better) Translates to: PNISSGVSKLVPGLD*ACGVFLYGPELRLM Trigger: CATCAGTCTTAGCTCAGGGCCATATAGAAATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTGACCCCAGAACTGATGTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAAACAGAGAACCCAGAAGGGAAATATGTCAATATCAGGAAGACACGTGAAATCTCCAGGAAGCATGTaGAGCCCACAGTGCCGCACA | + |
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Preference number: 2 (lower is better) Translates to: SKQRTQKGNMSISGRHVKSPGSM*SPQCRT Trigger: TGTGCGGCACTGTGGGCTGCACATGCTTCCTGGAGA...TTTCACGTGTCTTCCTGATATTGACATATTTCCCTTCTGGGTTCTCTGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR-3UTR TCA 90 bp | CACTCTGTTTTTGGAGTTGCAGCAGGGACCTGTGACCCTCTGAGTCTAAACAACTATCAGGAAGACACGTaGAACAAAACCAACAAAACC | + |
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Preference number: 2 (lower is better) Translates to: HSVFGVAAGTCDPLSLNNYQEDT*NKTNKT Trigger: GGTTTTGTTGGTTTTGTTTCACGTGTCTTCCTGATA...GTTGTTTAGACTCAGAGGGTCACAGGTCCCTGCTGCAACTCCAAAAACAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATAAATGAAGGTGTACATACTAAACACAGGCTTAGACCTGTGACAGCCACATCCAAACATCAGTTCTaGGGTCAGCAAACTAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: QINEGVHTKHRLRPVTATSKHQF*GQQTSP Trigger: GGGACTAGTTTGCTGACCCCAGAACTGATGTTTGGA...TGTGGCTGTCACAGGTCTAAGCCTGTGTTTAGTATGTACACCTTCATTTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTCCTATTGGAATAGTGAATATTGGACAGAAGGAAAAACCACGGCTACAGGGAATAATCAACATGAGTaGTCAAAACAGAGAACCCAG | + |
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Preference number: 2 (lower is better) Translates to: CSYWNSEYWTEGKTTATGNNQHE*SKQRTQ Trigger: CTGGGTTCTCTGTTTTGATCACTCATGTTGATTATT...CCCTGTAGCCGTGGTTTTTCCTTCTGTCCAATATTCACTATTCCAATAGGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR-3UTR TCA 90 bp | AAACAGAGAACCCAGAAGGGAAATATGTCAATATCAGGAAGACACGTGAAACAAATTAGAAGAGGTGACTaGAAAGCAAGTCAGTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: KQRTQKGNMSISGRHVKQIRRGD*KASQFF Trigger: AAAGAACTGACTTGCTTTTCAGTCACCTCTTCTAAT...TTGTTTCACGTGTCTTCCTGATATTGACATATTTCCCTTCTGGGTTCTCTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR CCA 72 bp | AGCCACGTGCAGGGCCAGGTGTCCAAACATCAGTTCTaGGGTCAGCAAACTAGTCCCTGGGCTGGACTTGGC | + |
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Preference number: 3 (lower is better) Translates to: SHVQGQVSKHQF*GQQTSPWAGLG Trigger: GCCAAGTCCAGCCCAGGGACTAGTTTGCTGACCCCAGAACTGATGTTTGGACACCTGGCCCTGCACGTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR GCA 72 bp | TACACAGGCAACTGCGAGGCCCAGGTCACGTGCATCTaGTTCCTCAGGAGCATCGTCACTTGGGAAAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: YTGNCEAQVTCI*FLRSIVTWERD Trigger: ATCCCTTTCCCAAGTGACGATGCTCCTGAGGAAGCAGATGCACGTGACCTGGGCCTCGCAGTTGCCTGTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR CCA 72 bp | CACAACACAGAACCATATGTGGACTGCAGTCTCAGATaGCGCTGCCTGGCTCTCCAGGAAGCATGTGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: HNTEPYVDCSLR*RCLALQEACAA Trigger: GGCTGCACATGCTTCCTGGAGAGCCAGGCAGCGCCATCTGAGACTGCAGTCCACATATGGTTCTGTGTTGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR GCA 72 bp | GTCTACTTTGTACAGTCTGAAGGTAACAGAGCCACGTaGAGGGCCAGGTGTCCAAACATCAGTTCTGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: VYFVQSEGNRAT*RARCPNISSGV Trigger: GACCCCAGAACTGATGTTTGGACACCTGGCCCTGCACGTGGCTCTGTTACCTTCAGACTGTACAAAGTAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR CCA 72 bp | GTCACGTGCATCTGCTTCCTCAGGAGCATCGTCACTTaGGAAAGGGATCTTTTGATGCCGTTCTCCAGATTC | + |
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Preference number: 3 (lower is better) Translates to: VTCICFLRSIVT*ERDLLMPFSRF Trigger: GAATCTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGATGCTCCTGAGGAAGCAGATGCACGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR CCA 72 bp | TCCAAACATCAGTTCTGGGGTCAGCAAACTAGTCCCTaGGCTGGACTTGGCCTGTGGAGTATTTCTATATGG | + |
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Preference number: 3 (lower is better) Translates to: SKHQFWGQQTSP*AGLGLWSISIW Trigger: CCATATAGAAATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTGACCCCAGAACTGATGTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR TCA 72 bp | AGGTCACTCTGTTTTTGGAGTTGCAGCAGGGACCTGTaGCCCTCTGAGTCTAAACAACTGAGAAATGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RSLCFWSCSRDL*PSESKQLRNGK Trigger: CTTCCCATTTCTCAGTTGTTTAGACTCAGAGGGTCACAGGTCCCTGCTGCAACTCCAAAAACAGAGTGACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR GCA 72 bp | AGGCTTAGACCTGTGACAGCCACACAGCCCATCAACTaGTGTAAATACTTCTTCTTACCTTGTTCCTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: RLRPVTATQPIN*CKYFFLPCSWD Trigger: GTCCCAGGAACAAGGTAAGAAGAAGTATTTACAGCAGTTGATGGGCTGTGTGGCTGTCACAGGTCTAAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR TCA 72 bp | GCAGCAGGGACCTGTGACCCTCTGAGTCTAAACAACTaGGAAATGGGAAGAGTCCATTGTGTGCTTGATTTT | + |
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Preference number: 3 (lower is better) Translates to: AAGTCDPLSLNN*EMGRVHCVLDF Trigger: AAAATCAAGCACACAATGGACTCTTCCCATTTCTCAGTTGTTTAGACTCAGAGGGTCACAGGTCCCTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR TCA 72 bp | TCCTCAGGAGCATCGTCACTTGGGAAAGGGATCTTTTaGTGCCGTTCTCCAGATTCTTTTCCTTACATGCTT | + |
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Preference number: 3 (lower is better) Translates to: SSGASSLGKGIF*CRSPDSFPYML Trigger: AAGCATGTAAGGAAAAGAATCTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGATGCTCCTGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR TCA 72 bp | ATGAAGGTGTACATACTAAACACAGGCTTAGACCTGTaGCAGCCACACAGCCCATCAACTGCTGTAAATACT | + |
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Preference number: 3 (lower is better) Translates to: MKVYILNTGLDL*QPHSPSTAVNT Trigger: AGTATTTACAGCAGTTGATGGGCTGTGTGGCTGTCACAGGTCTAAGCCTGTGTTTAGTATGTACACCTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR TCA 72 bp | GCTGGACTTGGCCTGTGGAGTATTTCTATATGGCCCTaGGCTAAGACTGATGTGTGTATTTCTAAAAGGATT | + |
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Preference number: 3 (lower is better) Translates to: AGLGLWSISIWP*AKTDVCISKRI Trigger: AATCCTTTTAGAAATACACACATCAGTCTTAGCTCAGGGCCATATAGAAATACTCCACAGGCCAAGTCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR TCA 90 bp | CAGTTCTGGGGTCAGCAAACTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTCTGTCACTGTGCTCCTaGCGTGCTGCATGGCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: QFWGQQTSPWAGLGLWSILSLCS*RAAWRR Trigger: CCTTCGCCATGCAGCACGTCAGGAGCACAGTGACAG...AATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTGACCCCAGAACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR TCA 90 bp | GCTCTCCAGGAAGCATGTGCAGCCCACAGTGCCGCACAGGAGCTCTGTGTACACAATACAAGCCAGCGATaGTGTGCCAAACGATCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ALQEACAAHSAAQELCVHNTSQR*CAKRSS Trigger: AGAGGATCGTTTGGCACATCATCGCTGGCTTGTATT...GTGTACACAGAGCTCCTGTGCGGCACTGTGGGCTGCACATGCTTCCTGGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR CCA 90 bp | CACGTGCAGGGCCAGGTGTCCAAACATCAGTTCTGGGGTCAGCAAACTAGTCCCGTGGGGGCTAAATCATaGCAATGCGAACATCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: HVQGQVSKHQFWGQQTSPVGAKS*QCEHPG Trigger: CCCAGGATGTTCGCATTGCCATGATTTAGCCCCCAC...GGGACTAGTTTGCTGACCCCAGAACTGATGTTTGGACACCTGGCCCTGCACGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR CCA 90 bp | CAGCAAACTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTTCTATATGGCCCTTGCAGAGGCTGTCCTaGGCGTCACAGTCCACCCAT | + |
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Preference number: 4 (lower is better) Translates to: QQTSPWAGLGLWSISIWPLQRLS*ASQSTH Trigger: ATGGGTGGACTGTGACGCCCAGGACAGCCTCTGCAA...GGGCCATATAGAAATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR CCA 90 bp | GCTCTCCAGGAAGCATGTGCAGCCCACAGTGCCGCACAGGAGCTCTGTGTACACGAAGTCAACAAGCCATaGTTCCTTGTCACTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ALQEACAAHSAAQELCVHEVNKP*FLVTCR Trigger: CCTGCAAGTGACAAGGAACCATGGCTTGTTGACTTC...GTGTACACAGAGCTCCTGTGCGGCACTGTGGGCTGCACATGCTTCCTGGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR GCA 90 bp | AGAACCATATGTGGACTGCAGTCTCAGATGGCGCTGCCTGGCTCTCCAGGAAGCTTAACGTCCGGGCCATaGGTTTCCATTCTGGCATCA | + |
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Preference number: 4 (lower is better) Translates to: RTICGLQSQMALPGSPGSLTSGP*VSILAS Trigger: TGATGCCAGAATGGAAACGCATGGCCCGGACGTTAA...GCTTCCTGGAGAGCCAGGCAGCGCCATCTGAGACTGCAGTCCACATATGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR TCA 90 bp | GCTCTCCAGGAAGCATGTGCAGCCCACAGTGCCGCACAGGAGCTCTGTGTACACAACAAAATTTCCTGTTaGCAGCTCTGTCACTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: ALQEACAAHSAAQELCVHNKISC*QLCHCA Trigger: AGCACAGTGACAGAGCTGTCAACAGGAAATTTTGTT...GTGTACACAGAGCTCCTGTGCGGCACTGTGGGCTGCACATGCTTCCTGGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR GCA 90 bp | CTTCCTCAGGAGCATCGTCACTTGGGAAAGGGATCTTTTGATGCCGTTCTCCAGGGAAATAAGCCGTGGTaGTGGCTGTGGTATCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LPQEHRHLGKGSFDAVLQGNKPW*WLWYPG Trigger: GCCTGGATACCACAGCCAGCACCACGGCTTATTTCC...CTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGATGCTCCTGAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR CCA 90 bp | CACAGGAGCTCTGTGTACACAGGCAACTGCGAGGCCCAGGTCACGTGCATCTGCACAGGGATGACACCATaGAGAATAGAAATCGACCAT | + |
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Preference number: 4 (lower is better) Translates to: HRSSVYTGNCEAQVTCICTGMTP*RIEIDH Trigger: ATGGTCGATTTCTATTCTCCATGGTGTCATCCCTGT...GCAGATGCACGTGACCTGGGCCTCGCAGTTGCCTGTGTACACAGAGCTCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR TCA 90 bp | CAGCAAACTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTTCTATATGGCCCGATCATCACCACAGTTaGCAGCTCCGATTCGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: QQTSPWAGLGLWSISIWPDHHHS*QLRFEA Trigger: TGCTTCGAATCGGAGCTGTCAACTGTGGTGATGATC...GGGCCATATAGAAATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR GCA 90 bp | CAACTGCGAGGCCCAGGTCACGTGCATCTGCTTCCTCAGGAGCATCGTCACTTGGTCTTATTTCTCTACTaGTTGCAGTTTTCGACACTC | + |
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Preference number: 4 (lower is better) Translates to: QLRGPGHVHLLPQEHRHLVLFLY*LQFSTL Trigger: GAGTGTCGAAAACTGCAAGCAGTAGAGAAATAAGAC...CAAGTGACGATGCTCCTGAGGAAGCAGATGCACGTGACCTGGGCCTCGCAGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR CCA 90 bp | CACGTGCAGGGCCAGGTGTCCAAACATCAGTTCTGGGGTCAGCAAACTAGTCCCAAATCTATGGATGCTTaGGGCAAAAATCCAAGACCC | + |
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Preference number: 4 (lower is better) Translates to: HVQGQVSKHQFWGQQTSPKSMDA*GKNPRP Trigger: GGGTCTTGGATTTTTGCCCCAAGCATCCATAGATTT...GGGACTAGTTTGCTGACCCCAGAACTGATGTTTGGACACCTGGCCCTGCACGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR CCA 90 bp | CAGCAAACTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTTCTATATGGCCCTCAGGAGCAAAATTCTaGCAAGGTCCACACCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QQTSPWAGLGLWSISIWPSGAKF*QGPHQG Trigger: TCCTTGGTGTGGACCTTGCCAGAATTTTGCTCCTGA...GGGCCATATAGAAATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| 3UTR CAA 72 bp | GGTCACGTGCATCTGCTTCCTCAGGAGCATCGTCACTaGGGAAAGGGATCTTTTGATGCCGTTCTCCAGATT | + |
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Preference number: 4 (lower is better) Translates to: GHVHLLPQEHRH*GKGSFDAVLQI Trigger: AATCTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGATGCTCCTGAGGAAGCAGATGCACGTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR TCA 90 bp | CAGTTCTGGGGTCAGCAAACTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTAAATCAACCACCCAGTaGGTTTTCCCTTGTAGAACT | + |
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Preference number: 4 (lower is better) Translates to: QFWGQQTSPWAGLGLWSIKSTTQ*VFPCRT Trigger: AGTTCTACAAGGGAAAACTCACTGGGTGGTTGATTT...AATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTGACCCCAGAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR TCA 90 bp | AACACAGAACCATATGTGGACTGCAGTCTCAGATGGCGCTGCCTGGCTCTCCAGTTGCAGAGTCCTTCATaGATTGTACAGTCTAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: NTEPYVDCSLRWRCLALQLQSPS*IVQSKV Trigger: TACCTTAGACTGTACAATTCATGAAGGACTCTGCAA...CTGGAGAGCCAGGCAGCGCCATCTGAGACTGCAGTCCACATATGGTTCTGTGTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR CCA 90 bp | CATCTGCTTCCTCAGGAGCATCGTCACTTGGGAAAGGGATCTTTTGATGCCGTTCCCTGTCATTCAAAGTaGCTCCAGGAGGGAAATAAG | + |
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Preference number: 4 (lower is better) Translates to: HLLPQEHRHLGKGSFDAVPCHSK*LQEGNK Trigger: CTTATTTCCCTCCTGGAGCCACTTTGAATGACAGGG...AACGGCATCAAAAGATCCCTTTCCCAAGTGACGATGCTCCTGAGGAAGCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR TCA 90 bp | CAGCAAACTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTTCTATATGGCCCAAACGATCCTCTAGTTaGTTTGCTGAAAGCAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: QQTSPWAGLGLWSISIWPKRSSS*FAESSS Trigger: TGAACTGCTTTCAGCAAATCAACTAGAGGATCGTTT...GGGCCATATAGAAATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR GCA 90 bp | CAGTTCTGGGGTCAGCAAACTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTGGATGTTATACATGTTaGAGAGTCCTTCATGAATTG | + |
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Preference number: 4 (lower is better) Translates to: QFWGQQTSPWAGLGLWSIGCYTC*RVLHEL Trigger: CAATTCATGAAGGACTCTGCAACATGTATAACATCC...AATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTGACCCCAGAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR CCA 90 bp | CTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTTCTATATGGCCCTGAGCTACTTTTTACTTGGCTTTaGAGCGTTTCCAATTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LVPGLDLACGVFLYGPELLFTWL*SVSNFP Trigger: TGGAAAATTGGAAACGCTCCAAAGCCAAGTAAAAAG...TAGCTCAGGGCCATATAGAAATACTCCACAGGCCAAGTCCAGCCCAGGGACTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR TCA 90 bp | ATCGTCACTTGGGAAAGGGATCTTTTGATGCCGTTCTCCAGATTCTTTTCCTTACTTGCAGGGAAGTTCTaGGGTCCAAGTGTGGTAACA | + |
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Preference number: 4 (lower is better) Translates to: IVTWERDLLMPFSRFFSLLAGKF*GPSVVT Trigger: TGTTACCACACTTGGACCTCAGAACTTCCCTGCAAG...TAAGGAAAAGAATCTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR GCA 90 bp | CATCTGCTTCCTCAGGAGCATCGTCACTTGGGAAAGGGATCTTTTGATGCCGTTTATTTCTCTACTGCTTaGAGTTTTCGACACTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: HLLPQEHRHLGKGSFDAVYFSTA*SFRHSK Trigger: CTTGGAGTGTCGAAAACTGCAAGCAGTAGAGAAATA...AACGGCATCAAAAGATCCCTTTCCCAAGTGACGATGCTCCTGAGGAAGCAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS-3UTR GCA 90 bp | CACTCTGTTTTTGGAGTTGCAGCAGGGACCTGTGACCCTCTGAGTCTAAACAACATCCAGACTTCATCATaGTTTCTCTGTTTAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSVFGVAAGTCDPLSLNNIQTSS*FLCLTS Trigger: GCTGGTTAAACAGAGAAAGCATGATGAAGTCTGGAT...GTTGTTTAGACTCAGAGGGTCACAGGTCCCTGCTGCAACTCCAAAAACAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTGTACAGTCTGAAGGTAACAGAGCCACGTGCAGGGCCAGGTGTCCAAACAATCACCATGTGCATTTaGGTTATTCGGGTTTTTATC | + |
|
Preference number: 4 (lower is better) Translates to: TLYSLKVTEPRAGPGVQTITMCI*VIRVFI Trigger: GATAAAAACCCGAATAACCCAAATGCACATGGTGAT...TGTTTGGACACCTGGCCCTGCACGTGGCTCTGTTACCTTCAGACTGTACAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| 3UTR CAA 72 bp | TTCCTCAGGAGCATCGTCACTTGGGAAAGGGATCTTTaGATGCCGTTCTCCAGATTCTTTTCCTTACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLRSIVTWERDL*MPFSRFFSLHA Trigger: AGCATGTAAGGAAAAGAATCTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGATGCTCCTGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR TCA 90 bp | ATCGTCACTTGGGAAAGGGATCTTTTGATGCCGTTCTCCAGATTCTTTTCCTTATGTAAGAGAGACCACTaGAGGGTTTCTGAGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IVTWERDLLMPFSRFFSLCKRDH*RVSEIL Trigger: GAGGATCTCAGAAACCCTTCAGTGGTCTCTCTTACA...TAAGGAAAAGAATCTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAACAGAGAACCCAGAAGGGAAATATGTCAATATCAGGAAGACACGTGAAACCTGAGTCGGGTCTGTaGTGTCAAACAATCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKQRTQKGNMSISGRHVKPESGL*CQTIFS Trigger: GGAGAAGATTGTTTGACATCACAGACCCGACTCAGG...TTTCACGTGTCTTCCTGATATTGACATATTTCCCTTCTGGGTTCTCTGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR TCA 90 bp | ATCGTCACTTGGGAAAGGGATCTTTTGATGCCGTTCTCCAGATTCTTTTCCTTATCATACTGGCCTCCTTaGTTATCTTCAAGTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IVTWERDLLMPFSRFFSLSYWPP*LSSSPF Trigger: AAAGGGACTTGAAGATAATCAAGGAGGCCAGTATGA...TAAGGAAAAGAATCTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR GCA 90 bp | CAAATAAATGAAGGTGTACATACTAAACACAGGCTTAGACCTGTGACAGCCACATCCATTGTACTTCACTaGAGCCATTCCAGACCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QINEGVHTKHRLRPVTATSIVLH*SHSRPK Trigger: TTTAGGTCTGGAATGGCTGCAGTGAAGTACAATGGA...TGTGGCTGTCACAGGTCTAAGCCTGTGTTTAGTATGTACACCTTCATTTATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CCA 90 bp | ATCGTCACTTGGGAAAGGGATCTTTTGATGCCGTTCTCCAGATTCTTTTCCTTAGAATACCACTGTCGTTaGATAAGCTTGGATGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: IVTWERDLLMPFSRFFSLEYHCR*ISLDVI Trigger: TATAACATCCAAGCTTATCCAACGACAGTGGTATTC...TAAGGAAAAGAATCTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CCA 90 bp | AAACAGAGAACCCAGAAGGGAAATATGTCAATATCAGGAAGACACGTGAAACAAGAGGTGTTAAATCTATaGATGCTTGGGGCAAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: KQRTQKGNMSISGRHVKQEVLNL*MLGAKI Trigger: GATTTTTGCCCCAAGCATCCATAGATTTAACACCTC...TTGTTTCACGTGTCTTCCTGATATTGACATATTTCCCTTCTGGGTTCTCTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS CCA 90 bp | CCCTGTCATTCAAAGTGGCTCCAGGAGGGAAATAAGCCGTGGTGCTaGCTGTGGTATCCAGGCTCTTGCAGAGGCTGTCCTGGGCGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PCHSKWLQEGNKPWC*LWYPGSCRGCPGRH Trigger: GTGACGCCCAGGACAGCCTCTGCAAGAGCCTGGATACCACAGCCAGCACCACGGCTTATTTCCCTCCTGGAGCCACTTTGAATGACAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | AACACAGAACCATATGTGGACTGCAGTCTCAGATGGCGCTGCCTGGCTCTCCAGGTGGTATCCAGGCTCTaGCAGAGGCTGTCCTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: NTEPYVDCSLRWRCLALQVVSRL*QRLSWA Trigger: CGCCCAGGACAGCCTCTGCAAGAGCCTGGATACCAC...CTGGAGAGCCAGGCAGCGCCATCTGAGACTGCAGTCCACATATGGTTCTGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS CCA 90 bp | CATTCAAAGTGGCTCCAGGAGGGAAATAAGCCGTGGTGCTGGCTGTaGTATCCAGGCTCTTGCAGAGGCTGTCCTGGGCGTCACAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSKWLQEGNKPWCWL*YPGSCRGCPGRHSP Trigger: TGGACTGTGACGCCCAGGACAGCCTCTGCAAGAGCCTGGATACCACAGCCAGCACCACGGCTTATTTCCCTCCTGGAGCCACTTTGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS GCA 90 bp | TTTCCCTGTCATTCAAAGTGGCTCCAGGAGGGAAATAAGCCGTGGTaGTGGCTGTGGTATCCAGGCTCTTGCAGAGGCTGTCCTGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: FPCHSKWLQEGNKPW*WLWYPGSCRGCPGR Trigger: ACGCCCAGGACAGCCTCTGCAAGAGCCTGGATACCACAGCCAGCACCACGGCTTATTTCCCTCCTGGAGCCACTTTGAATGACAGGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCAGGAAGCATGTGCAGCCCACAGTGCCGCACAGGAGCTCTGTGTACACATGGTTCCTTGTCACTaGCAGGGAAGTTCTGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ALQEACAAHSAAQELCVHMVPCH*QGSSEV Trigger: GACCTCAGAACTTCCCTGCAAGTGACAAGGAACCAT...GTGTACACAGAGCTCCTGTGCGGCACTGTGGGCTGCACATGCTTCCTGGAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS CCA 90 bp | CGCACGACATGGCGGACACCAAGGGGCAAAGAAGTCAACAAGCCATaGTTCCTTGTCACTTGCAGGGAAGTTCTGAGGTCCAAGTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RTTWRTPRGKEVNKP*FLVTCREVLRSKCG Trigger: ACCACACTTGGACCTCAGAACTTCCCTGCAAGTGACAAGGAACCATGGCTTGTTGACTTCTTTGCCCCTTGGTGTCCGCCATGTCGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | AGAACCATATGTGGACTGCAGTCTCAGATGGCGCTGCCTGGCTCTCCAGGAAGCACAAGCCATGGTTCCTaGTCACTTGCAGGGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RTICGLQSQMALPGSPGSTSHGS*SLAGKF Trigger: GAACTTCCCTGCAAGTGACAAGGAACCATGGCTTGT...GCTTCCTGGAGAGCCAGGCAGCGCCATCTGAGACTGCAGTCCACATATGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCAGGAAGCATGTGCAGCCCACAGTGCCGCACAGGAGCTCTGTGTACACGCTCTCACTTTTCCTTaGATCATCCTAGCCAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALQEACAAHSAAQELCVHALTFP*IILAKS Trigger: ACTCTTGGCTAGGATGATCAAAGGAAAAGTGAGAGC...GTGTACACAGAGCTCCTGTGCGGCACTGTGGGCTGCACATGCTTCCTGGAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | AGAACCATATGTGGACTGCAGTCTCAGATGGCGCTGCCTGGCTCTCCAGGAAGCAAAAGAATGATACTGTaGGCAGTCCACACTGCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: RTICGLQSQMALPGSPGSKRMIL*AVHTAY Trigger: GTAGGCAGTGTGGACTGCCAACAGTATCATTCTTTT...GCTTCCTGGAGAGCCAGGCAGCGCCATCTGAGACTGCAGTCCACATATGGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS GCA 90 bp | ACAAAATTTCCTGTTGACAGCTCTGTCACTGTGCTCCTGACGTGCTaGATGGCGAAGGCCACTAAGCTCTCCTTTGACCGATCTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TKFPVDSSVTVLLTC*MAKATKLSFDRSPL Trigger: CAATGGAGATCGGTCAAAGGAGAGCTTAGTGGCCTTCGCCATGCAGCACGTCAGGAGCACAGTGACAGAGCTGTCAACAGGAAATTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTGGGGTCAGCAAACTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTCACAGTTCTCCAGAGTaGACAGCAGCATCAAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: QFWGQQTSPWAGLGLWSIHSSPE*TAASNS Trigger: AGAATTTGATGCTGCTGTCAACTCTGGAGAACTGTG...AATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTGACCCCAGAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCAGGAAGCATGTGCAGCCCACAGTGCCGCACAGGAGCTCTGTGTACACTATCTCGGGGTATCTTaGAACATTTTCTTGAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: ALQEACAAHSAAQELCVHYLGVS*NIFLST Trigger: TGTACTCAAGAAAATGTTCAAAGATACCCCGAGATA...GTGTACACAGAGCTCCTGTGCGGCACTGTGGGCTGCACATGCTTCCTGGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS GCA 90 bp | TTAACAAAATTTCCTGTTGACAGCTCTGTCACTGTGCTCCTGACGTaGTGCATGGCGAAGGCCACTAAGCTCTCCTTTGACCGATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTKFPVDSSVTVLLT*CMAKATKLSFDRSP Trigger: TGGAGATCGGTCAAAGGAGAGCTTAGTGGCCTTCGCCATGCAGCACGTCAGGAGCACAGTGACAGAGCTGTCAACAGGAAATTTTGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTCAGGAGCATCGTCACTTGGGAAAGGGATCTTTTGATGCCGTTCTCCAGTTTGACCGATCTCCATaGTACTTCACTGCAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LPQEHRHLGKGSFDAVLQFDRSP*YFTAAI Trigger: AATGGCTGCAGTGAAGTACAATGGAGATCGGTCAAA...CTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGATGCTCCTGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS TCA 90 bp | GTTAACAAGGCCGTCCAACATGCCACTAAGCCTGAGTCGGGTCTGTaGTGTCAAACAATCTTCTCCTTTAGAGCAGAATGTGATCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VNKAVQHATKPESGL*CQTIFSFRAECDQP Trigger: TGGCTGATCACATTCTGCTCTAAAGGAGAAGATTGTTTGACATCACAGACCCGACTCAGGCTTAGTGGCATGTTGGACGGCCTTGTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS TCA 90 bp | GAGTACAAAAAGAATGATACTGTTGGCAGTCCACACTGCCTACATTaGTCAGTCCAGTTAACGTCCGGGCCATGCGTTTCCATTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EYKKNDTVGSPHCLH*SVQLTSGPCVSILA Trigger: TGCCAGAATGGAAACGCATGGCCCGGACGTTAACTGGACTGATCAATGTAGGCAGTGTGGACTGCCAACAGTATCATTCTTTTTGTACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTGGGGTCAGCAAACTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTAATCACCATGTGCATTaGGGTTATTCGGGTTTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: QFWGQQTSPWAGLGLWSINHHVH*GYSGFY Trigger: ATAAAAACCCGAATAACCCAAATGCACATGGTGATT...AATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTGACCCCAGAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTCTGGGGTCAGCAAACTAGTCCCTGGGCTGGACTTGGCCTGTGGAGTATTCCCTTTTCTCCATATTaGTCATACTTTTTCCGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QFWGQQTSPWAGLGLWSIPFSPY*SYFFRR Trigger: TCTACGGAAAAAGTATGACAAATATGGAGAAAAGGG...AATACTCCACAGGCCAAGTCCAGCCCAGGGACTAGTTTGCTGACCCCAGAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTGTTTTTGGAGTTGCAGCAGGGACCTGTGACCCTCTGAGTCTAAACAACCTCATACTGGCCTCCTaGATTATCTTCAAGTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HSVFGVAAGTCDPLSLNNLILAS*IIFKSL Trigger: AAGGGACTTGAAGATAATCAAGGAGGCCAGTATGAG...GTTGTTTAGACTCAGAGGGTCACAGGTCCCTGCTGCAACTCCAAAAACAGAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS TCA 90 bp | CTGTTTAACCAGCTCATTGAAAGTGCTGGGTGTAAGAGAGACCACTaGAGGGTTTCTGAGATCCTCTATGAACTCCAAGATCTGTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LFNQLIESAGCKRDH*RVSEILYELQDLFR Trigger: GCGGAACAGATCTTGGAGTTCATAGAGGATCTCAGAAACCCTTCAGTGGTCTCTCTTACACCCAGCACTTTCAATGAGCTGGTTAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS CCA 90 bp | CATGCGTTTCCATTCTGGCATCAAGACCTGACAGGGATGACACCATaGAGAATAGAAATCGACCATCCAGACTTCATCATGCTTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HAFPFWHQDLTGMTP*RIEIDHPDFIMLSL Trigger: CAGAGAAAGCATGATGAAGTCTGGATGGTCGATTTCTATTCTCCATGGTGTCATCCCTGTCAGGTCTTGATGCCAGAATGGAAACGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTGTACAGTCTGAAGGTAACAGAGCCACGTGCAGGGCCAGGTGTCCAAACACGTAGATCTTCATCTTaGAGTACTTCATATGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TLYSLKVTEPRAGPGVQTRRSSS*STSYAL Trigger: TAGAGCATATGAAGTACTCAAAGATGAAGATCTACG...TGTTTGGACACCTGGCCCTGCACGTGGCTCTGTTACCTTCAGACTGTACAAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTGTTTTTGGAGTTGCAGCAGGGACCTGTGACCCTCTGAGTCTAAACAACAGAGTCCTTCATGAATaGTACAGTCTAAGGTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSVFGVAAGTCDPLSLNNRVLHE*YSLRYQ Trigger: TTGGTACCTTAGACTGTACAATTCATGAAGGACTCT...GTTGTTTAGACTCAGAGGGTCACAGGTCCCTGCTGCAACTCCAAAAACAGAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | CATCTGCTTCCTCAGGAGCATCGTCACTTGGGAAAGGGATCTTTTGATGCCGTTTCTTTTTACTTGGCTTaGGAGCGTTTCCAATTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLLPQEHRHLGKGSFDAVSFYLA*ERFQFS Trigger: GGAAAATTGGAAACGCTCCAAAGCCAAGTAAAAAGA...AACGGCATCAAAAGATCCCTTTCCCAAGTGACGATGCTCCTGAGGAAGCAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS TCA 90 bp | TGTTGCAGAGTCCTTCATGAATTGTACAGTCTAAGGTACCAACTTTaGGTTGACCGTAGAGCAGTGTTGATGCTTTCCGTAACTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CCRVLHELYSLRYQL*VDRRAVLMLSVTLA Trigger: TGCCAGAGTTACGGAAAGCATCAACACTGCTCTACGGTCAACTCAAAGTTGGTACCTTAGACTGTACAATTCATGAAGGACTCTGCAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | AAACAGAGAACCCAGAAGGGAAATATGTCAATATCAGGAAGACACGTGAAACAACGATCATCACCACAGTaGACAGCTCCGATTCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQRTQKGNMSISGRHVKQRSSPQ*TAPIRS Trigger: GCTTCGAATCGGAGCTGTCAACTGTGGTGATGATCG...TTGTTTCACGTGTCTTCCTGATATTGACATATTTCCCTTCTGGGTTCTCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTGACAGCCACACAGCCCATCAACTGCTGTAAATACTTCTTCTTACCTTGTCCCAAATACTTTTCTTaGCTCTCTCGTACTGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: PVTATQPINCCKYFFLPCPKYFS*LSRTGT Trigger: TGTACCAGTACGAGAGAGCAAAGAAAAGTATTTGGG...ACAAGGTAAGAAGAAGTATTTACAGCAGTTGATGGGCTGTGTGGCTGTCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | CAAATAAATGAAGGTGTACATACTAAACACAGGCTTAGACCTGTGACAGCCACATCCACACTGCCTACATaGATCAGTCCAGTTAACGTC | + |
|
Preference number: 5 (lower is better) Translates to: QINEGVHTKHRLRPVTATSTLPT*ISPVNV Trigger: GACGTTAACTGGACTGATCAATGTAGGCAGTGTGGA...TGTGGCTGTCACAGGTCTAAGCCTGTGTTTAGTATGTACACCTTCATTTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS TCA 90 bp | GTTCCGCAGAGTGATGTCCTTCATACTCATGAATACTGGACTGATTaGATACCACTGTCGTTGGATAAGCTTGGATGTTATACATGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VPQSDVLHTHEYWTD*IPLSLDKLGCYTCC Trigger: GCAACATGTATAACATCCAAGCTTATCCAACGACAGTGGTATTCAATCAGTCCAGTATTCATGAGTATGAAGGACATCACTCTGCGGAAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | ATCGTCACTTGGGAAAGGGATCTTTTGATGCCGTTCTCCAGATTCTTTTCCTTAGATCCTCTAGTTGATTaGCTGAAAGCAGTTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: IVTWERDLLMPFSRFFSLDPLVD*LKAVQS Trigger: ACTTTGAACTGCTTTCAGCAAATCAACTAGAGGATC...TAAGGAAAAGAATCTGGAGAACGGCATCAAAAGATCCCTTTCCCAAGTGACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS CCA 90 bp | TCCTTCATACTCATGAATACTGGACTGATTGAATACCACTGTCGTTaGATAAGCTTGGATGTTATACATGTTGCAGAGTCCTTCATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SFILMNTGLIEYHCR*ISLDVIHVAESFMN Trigger: ATTCATGAAGGACTCTGCAACATGTATAACATCCAAGCTTATCCAACGACAGTGGTATTCAATCAGTCCAGTATTCATGAGTATGAAGGA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS-3UTR CAA 90 bp | TCAAAACAGAGAACCCAGAAGGGAAATATGTCAATATCAGGAAGACACGTGAAACTTATTTCTTTTTACTaGGCTTTGGAGCGTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SKQRTQKGNMSISGRHVKLISFY*ALERFQ Trigger: TTGGAAACGCTCCAAAGCCAAGTAAAAAGAAATAAG...TTTCACGTGTCTTCCTGATATTGACATATTTCCCTTCTGGGTTCTCTGTTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS CCA 72 bp | TGGCTCCAGGAGGGAAATAAGCCGTGGTGCTGGCTGTaGTATCCAGGCTCTTGCAGAGGCTGTCCTGGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: WLQEGNKPWCWL*YPGSCRGCPGR Trigger: ACGCCCAGGACAGCCTCTGCAAGAGCCTGGATACCACAGCCAGCACCACGGCTTATTTCCCTCCTGGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS CCA 72 bp | CTGGCTGTGGTATCCAGGCTCTTGCAGAGGCTGTCCTaGGCGTCACAGTCCACCCATCCCACGTTAACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LAVVSRLLQRLS*ASQSTHPTLTR Trigger: CCTTGTTAACGTGGGATGGGTGGACTGTGACGCCCAGGACAGCCTCTGCAAGAGCCTGGATACCACAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS CCA 72 bp | TCAAAGTGGCTCCAGGAGGGAAATAAGCCGTGGTGCTaGCTGTGGTATCCAGGCTCTTGCAGAGGCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SKWLQEGNKPWC*LWYPGSCRGCP Trigger: AGGACAGCCTCTGCAAGAGCCTGGATACCACAGCCAGCACCACGGCTTATTTCCCTCCTGGAGCCACTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS GCA 72 bp | CATTCAAAGTGGCTCCAGGAGGGAAATAAGCCGTGGTaGTGGCTGTGGTATCCAGGCTCTTGCAGAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HSKWLQEGNKPW*WLWYPGSCRGC Trigger: ACAGCCTCTGCAAGAGCCTGGATACCACAGCCAGCACCACGGCTTATTTCCCTCCTGGAGCCACTTTGAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS GCA 72 bp | TTTCCTGTTGACAGCTCTGTCACTGTGCTCCTGACGTaGTGCATGGCGAAGGCCACTAAGCTCTCCTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FPVDSSVTVLLT*CMAKATKLSFD Trigger: GTCAAAGGAGAGCTTAGTGGCCTTCGCCATGCAGCACGTCAGGAGCACAGTGACAGAGCTGTCAACAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
||
| CDS CCA 72 bp | TGGCGGACACCAAGGGGCAAAGAAGTCAACAAGCCATaGTTCCTTGTCACTTGCAGGGAAGTTCTGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: WRTPRGKEVNKP*FLVTCREVLRS Trigger: GGACCTCAGAACTTCCCTGCAAGTGACAAGGAACCATGGCTTGTTGACTTCTTTGCCCCTTGGTGTCCGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS TCA 72 bp | CAAAATTTCCTGTTGACAGCTCTGTCACTGTGCTCCTaGCGTGCTGCATGGCGAAGGCCACTAAGCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QNFLLTALSLCS*RAAWRRPLSSP Trigger: AGGAGAGCTTAGTGGCCTTCGCCATGCAGCACGTCAGGAGCACAGTGACAGAGCTGTCAACAGGAAATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CAA 72 bp | CCTTTCATTCGGCAGAGCATCCGATCATCACCACAGTaGACAGCTCCGATTCGAAGCAACCCATCCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: PFIRQSIRSSPQ*TAPIRSNPSTS Trigger: AGAAGTGGATGGGTTGCTTCGAATCGGAGCTGTCAACTGTGGTGATGATCGGATGCTCTGCCGAATGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS TCA 72 bp | CTTTCATTCGGCAGAGCATCCGATCATCACCACAGTTaGCAGCTCCGATTCGAAGCAACCCATCCACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LSFGRASDHHHS*QLRFEATHPLL Trigger: AAGAAGTGGATGGGTTGCTTCGAATCGGAGCTGTCAACTGTGGTGATGATCGGATGCTCTGCCGAATGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS TCA 72 bp | AAGAATGATACTGTTGGCAGTCCACACTGCCTACATTaGTCAGTCCAGTTAACGTCCGGGCCATGCGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: KNDTVGSPHCLH*SVQLTSGPCVS Trigger: GGAAACGCATGGCCCGGACGTTAACTGGACTGATCAATGTAGGCAGTGTGGACTGCCAACAGTATCATTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS GCA 72 bp | CTAGGCAGGGCTGGAAGACATAAAGATCAGAGCAGATaGCCGGTGCAGAAGAGCAATCAAACCTTCCAACTT | + |
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Preference number: 6 (lower is better) Translates to: LGRAGRHKDQSR*PVQKSNQTFQL Trigger: AAGTTGGAAGGTTTGATTGCTCTTCTGCACCGGGCATCTGCTCTGATCTTTATGTCTTCCAGCCCTGCCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CCA 72 bp | GAAACAACACACTGGATTTTTCCCTGTCATTCAAAGTaGCTCCAGGAGGGAAATAAGCCGTGGTGCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: ETTHWIFPCHSK*LQEGNKPWCWL Trigger: CAGCCAGCACCACGGCTTATTTCCCTCCTGGAGCCACTTTGAATGACAGGGAAAAATCCAGTGTGTTGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CAA 72 bp | GCGAAGGCCACTAAGCTCTCCTTTGACCGATCTCCATaGTACTTCACTGCAGCCATTCCAGACCTAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: AKATKLSFDRSP*YFTAAIPDLKM Trigger: CATCTTTAGGTCTGGAATGGCTGCAGTGAAGTACAATGGAGATCGGTCAAAGGAGAGCTTAGTGGCCTTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS TCA 72 bp | GCCGTCCAACATGCCACTAAGCCTGAGTCGGGTCTGTaGTGTCAAACAATCTTCTCCTTTAGAGCAGAATGT | + |
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Preference number: 6 (lower is better) Translates to: AVQHATKPESGL*CQTIFSFRAEC Trigger: ACATTCTGCTCTAAAGGAGAAGATTGTTTGACATCACAGACCCGACTCAGGCTTAGTGGCATGTTGGACGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CAA 90 bp | CTGTTAACTCCTTTCATTCGGCAGAGCATCCGATCATCACCACAGTaGACAGCTCCGATTCGAAGCAACCCATCCACTTCTTTAGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: LLTPFIRQSIRSSPQ*TAPIRSNPSTSLAN Trigger: ATTTGCTAAAGAAGTGGATGGGTTGCTTCGAATCGGAGCTGTCAACTGTGGTGATGATCGGATGCTCTGCCGAATGAAAGGAGTTAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS GCA 72 bp | GGGCTGGAAGACATAAAGATCAGAGCAGATGCCCGGTaGAGAAGAGCAATCAAACCTTCCAACTTGAATATG | + |
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Preference number: 6 (lower is better) Translates to: GLEDIKIRADAR*RRAIKPSNLNM Trigger: CATATTCAAGTTGGAAGGTTTGATTGCTCTTCTGCACCGGGCATCTGCTCTGATCTTTATGTCTTCCAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CCA 72 bp | CCATTCTGGCATCAAGACCTGACAGGGATGACACCATaGAGAATAGAAATCGACCATCCAGACTTCATCATG | + |
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Preference number: 6 (lower is better) Translates to: PFWHQDLTGMTP*RIEIDHPDFIM Trigger: CATGATGAAGTCTGGATGGTCGATTTCTATTCTCCATGGTGTCATCCCTGTCAGGTCTTGATGCCAGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS TCA 72 bp | CAGCTCATTGAAAGTGCTGGGTGTAAGAGAGACCACTaGAGGGTTTCTGAGATCCTCTATGAACTCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: QLIESAGCKRDH*RVSEILYELQD Trigger: ATCTTGGAGTTCATAGAGGATCTCAGAAACCCTTCAGTGGTCTCTCTTACACCCAGCACTTTCAATGAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS GCA 72 bp | TCGACACTCCAAGTAAACTGTAAAAATTCTGATCTGTaGCCACCACAACGACCACGTACAGTATCAGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: STLQVNCKNSDL*PPQRPRTVSED Trigger: GTCTTCTGATACTGTACGTGGTCGTTGTGGTGGGCACAGATCAGAATTTTTACAGTTTACTTGGAGTGTCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CAA 72 bp | GTAACGGTAGTAGCTCCAGCTCTCATACTGGCCTCCTaGATTATCTTCAAGTCCCTTTTCTCCATATTTGTC | + |
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Preference number: 6 (lower is better) Translates to: VTVVAPALILAS*IIFKSLFSIFV Trigger: GACAAATATGGAGAAAAGGGACTTGAAGATAATCAAGGAGGCCAGTATGAGAGCTGGAGCTACTACCGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS GCA 72 bp | CCACTGTCGTTGGATAAGCTTGGATGTTATACATGTTaGAGAGTCCTTCATGAATTGTACAGTCTAAGGTAC | + |
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Preference number: 6 (lower is better) Translates to: PLSLDKLGCYTC*RVLHELYSLRY Trigger: GTACCTTAGACTGTACAATTCATGAAGGACTCTGCAACATGTATAACATCCAAGCTTATCCAACGACAGTGG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CCA 72 bp | CTCATGAATACTGGACTGATTGAATACCACTGTCGTTaGATAAGCTTGGATGTTATACATGTTGCAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LMNTGLIEYHCR*ISLDVIHVAES Trigger: GGACTCTGCAACATGTATAACATCCAAGCTTATCCAACGACAGTGGTATTCAATCAGTCCAGTATTCATGAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CAA 90 bp | ACCGAAATCGTAACGGTAGTAGCTCCAGCTCTCATACTGGCCTCCTaGATTATCTTCAAGTCCCTTTTCTCCATATTTGTCATACTTTTT | + |
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Preference number: 6 (lower is better) Translates to: TEIVTVVAPALILAS*IIFKSLFSIFVILF Trigger: AAAAAGTATGACAAATATGGAGAAAAGGGACTTGAAGATAATCAAGGAGGCCAGTATGAGAGCTGGAGCTACTACCGTTACGATTTCGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CAA 90 bp | CTCATGAATACTGGACTGATTGAATACCACTGTCGTTGGATAAGCTaGGATGTTATACATGTTGCAGAGTCCTTCATGAATTGTACAGTC | + |
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Preference number: 6 (lower is better) Translates to: LMNTGLIEYHCRWIS*DVIHVAESFMNCTV Trigger: GACTGTACAATTCATGAAGGACTCTGCAACATGTATAACATCCAAGCTTATCCAACGACAGTGGTATTCAATCAGTCCAGTATTCATGAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CAA 72 bp | ACTGGACTGATTGAATACCACTGTCGTTGGATAAGCTaGGATGTTATACATGTTGCAGAGTCCTTCATGAAT | + |
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Preference number: 6 (lower is better) Translates to: TGLIEYHCRWIS*DVIHVAESFMN Trigger: ATTCATGAAGGACTCTGCAACATGTATAACATCCAAGCTTATCCAACGACAGTGGTATTCAATCAGTCCAGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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| CDS CAA 72 bp | TTGAACATTTTCTTGAGTACAAAAAGAATGATACTGTaGGCAGTCCACACTGCCTACATTGATCAGTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LNIFLSTKRMIL*AVHTAYIDQSS Trigger: ACTGGACTGATCAATGTAGGCAGTGTGGACTGCCAACAGTATCATTCTTTTTGTACTCAAGAAAATGTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028392.8 |
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