Pregenerated sensors for DNAJB9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014905Ensembl transcript IDs: ENSMUST00000015049.5, ENSMUST00000220421.2
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TTACAGCTTCAGACATTTAGTAACCCAAGTCAGGGCCACAGGGCGTaGAGTTTTGAATTTGCAGAGGTTTCACTGCAATTATTATTCAAG | + |
Preference number: 1 (lower is better) Translates to: LQLQTFSNPSQGHRA*SFEFAEVSLQLLFK Trigger: CTTGAATAATAATTGCAGTGAAACCTCTGCAAATTCAAAACTGCACGCCCTGTGGCCCTGACTTGGGTTACTAAATGTCTGAAGCTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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3UTR-3UTR TCA 90 bp | GCAAACAGCCAAAAGCAATGGTCTTCTTCACTAAATGACTCAAAATTACAGCTTCAGGGCGTGCAGTTTTaGATTTGCAGAGGTTTCACT | + |
Preference number: 2 (lower is better) Translates to: ANSQKQWSSSLNDSKLQLQGVQF*ICRGFT Trigger: AGTGAAACCTCTGCAAATTCAAAACTGCACGCCCTG...AAGCTGTAATTTTGAGTCATTTAGTGAAGAAGACCATTGCTTTTGGCTGTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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3UTR-3UTR GCA 90 bp | GATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGATCCTAGATAAAGATAAGTaGAAAAGAGTGACTACACAC | + |
Preference number: 2 (lower is better) Translates to: DRLGEFQLHKTSRIWPMILDKDK*KRVTTH Trigger: GTGTGTAGTCACTCTTTTGCACTTATCTTTATCTAG...GATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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3UTR-3UTR CCA 90 bp | GATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGATCGTATGGAGTATAACATaGAAAAGTGCAGAACTAAAG | + |
Preference number: 2 (lower is better) Translates to: DRLGEFQLHKTSRIWPMIVWSIT*KSAELK Trigger: CTTTAGTTCTGCACTTTTCCATGTTATACTCCATAC...GATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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3UTR-3UTR CAA 90 bp | ATAAGATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATACAGGGCGTGCAGTTTaGAATTTGCAGAGGTTTCAC | + |
Preference number: 3 (lower is better) Translates to: IRSSGGISVTQNFKDMAYTGRAV*NLQRFH Trigger: GTGAAACCTCTGCAAATTCAAAACTGCACGCCCTGT...ATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATCTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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3UTR CCA 72 bp | CTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATaGCCTATGATCAGAATATGCTTCACTTTATACATA | + |
Preference number: 3 (lower is better) Translates to: LGEFQLHKTSRI*PMIRICFTLYI Trigger: TATGTATAAAGTGAAGCATATTCTGATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR TCA 90 bp | CGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGATCAGATTCCTCTTCGTTGAGTaGCAGTCCTGCAGTGCTTGC | + |
Preference number: 4 (lower is better) Translates to: RLGEFQLHKTSRIWPMIRFLFVE*QSCSAC Trigger: GCAAGCACTGCAGGACTGTCACTCAACGAAGAGGAA...TCTGATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CCA 90 bp | GATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGATCCCATCCTGGCGTGTGTaGAAGTGGTTTTCAAAATGC | + |
Preference number: 4 (lower is better) Translates to: DRLGEFQLHKTSRIWPMIPSWRV*KWFSKC Trigger: GCATTTTGAAAACCACTTCCACACACGCCAGGATGG...GATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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3UTR CAA 72 bp | ATGTGTGTTTATTTTGAGGGGAGAAGTCCGTCATCTTaGAGAATGAAGTCTCTGGTCTTCTTAGCCAGTCCT | + |
Preference number: 4 (lower is better) Translates to: MCVYFEGRSPSS*RMKSLVFLASP Trigger: AGGACTGGCTAAGAAGACCAGAGACTTCATTCTCAAAGATGACGGACTTCTCCCCTCAAAATAAACACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR TCA 90 bp | GCAAACAGCCAAAAGCAATGGTCTTCTTCACTAAATGACTCAAAATTACAGCTTTTTGATTTGTCGCTCTaGGGCAGACTTTGGCACACC | + |
Preference number: 4 (lower is better) Translates to: ANSQKQWSSSLNDSKLQLFDLSL*GRLWHT Trigger: GGTGTGCCAAAGTCTGCCTCAGAGCGACAAATCAAA...AAGCTGTAATTTTGAGTCATTTAGTGAAGAAGACCATTGCTTTTGGCTGTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR TCA 90 bp | ATAAGATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATTGTGAAAGGCCTTTTTaGTTTGTCGCTCTGAGGCAG | + |
Preference number: 4 (lower is better) Translates to: IRSSGGISVTQNFKDMAYCERPF*FVALRQ Trigger: CTGCCTCAGAGCGACAAATCAAAAAGGCCTTTCACA...ATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATCTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR TCA 90 bp | GCAAACAGCCAAAAGCAATGGTCTTCTTCACTAAATGACTCAAAATTACAGCTTATATTTCCTCTTCGTTaGGTGACAGTCCTGCAGTGC | + |
Preference number: 4 (lower is better) Translates to: ANSQKQWSSSLNDSKLQLIFPLR*VTVLQC Trigger: GCACTGCAGGACTGTCACTCAACGAAGAGGAAATAT...AAGCTGTAATTTTGAGTCATTTAGTGAAGAAGACCATTGCTTTTGGCTGTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR GCA 90 bp | ATAAGATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATCAAAAGGACTCCCATTaGCTCTTTGTCCTTTGCCAT | + |
Preference number: 4 (lower is better) Translates to: IRSSGGISVTQNFKDMAYQKDSH*LFVLCH Trigger: ATGGCAAAGGACAAAGAGGCAATGGGAGTCCTTTTG...ATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATCTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR TCA 90 bp | ATAAGATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGAAAACTCCTGGAAGTaGTGCCTTTGTCTACTAGAA | + |
Preference number: 4 (lower is better) Translates to: IRSSGGISVTQNFKDMAYENSWK*CLCLLE Trigger: TTCTAGTAGACAAAGGCATCACTTCCAGGAGTTTTC...ATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR GCA 90 bp | CGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGATCAGATGTTTCATACGCTTCTaGAATCTCTCTGAATTTTGC | + |
Preference number: 4 (lower is better) Translates to: RLGEFQLHKTSRIWPMIRCFIRF*NLSEFC Trigger: GCAAAATTCAGAGAGATTGCAGAAGCGTATGAAACA...TCTGATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CCA 90 bp | ATAAGATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATACTCTTTCCGACTATTaGCATCCGAGAGTGTTTCAT | + |
Preference number: 4 (lower is better) Translates to: IRSSGGISVTQNFKDMAYTLSDY*HPRVFH Trigger: ATGAAACACTCTCGGATGCCAATAGTCGGAAAGAGT...ATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CCA 90 bp | GATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGATCTTATTTTTGTCAGGGTaGTACTTCATGGCTAATTTG | + |
Preference number: 4 (lower is better) Translates to: DRLGEFQLHKTSRIWPMILFLSG*YFMANL Trigger: CAAATTAGCCATGAAGTACCACCCTGACAAAAATAA...GATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CCA 90 bp | ATAAGATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATTGGCGTGTGTGGAAGTaGTTTTCAAAATGCTTCTTA | + |
Preference number: 4 (lower is better) Translates to: IRSSGGISVTQNFKDMAYWRVWK*FSKCFL Trigger: TAAGAAGCATTTTGAAAACCACTTCCACACACGCCA...ATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATCTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR TCA 90 bp | GCAAACAGCCAAAAGCAATGGTCTTCTTCACTAAATGACTCAAAATTACAGCTTTGCTTGCTAGATCCATaGAATCTATTTTCAGTCTGT | + |
Preference number: 4 (lower is better) Translates to: ANSQKQWSSSLNDSKLQLCLLDP*NLFSVC Trigger: ACAGACTGAAAATAGATTTCATGGATCTAGCAAGCA...AAGCTGTAATTTTGAGTCATTTAGTGAAGAAGACCATTGCTTTTGGCTGTTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR GCA 90 bp | ATAAGATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATAAGTGGTTTTCAAAATaGTTCTTAGACCGAGTGTTT | + |
Preference number: 4 (lower is better) Translates to: IRSSGGISVTQNFKDMAYKWFSK*FLDRVF Trigger: AAACACTCGGTCTAAGAAGCATTTTGAAAACCACTT...ATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATCTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CCA 90 bp | GCAAACAGCCAAAAGCAATGGTCTTCTTCACTAAATGACTCAAAATTACAGCTTTATCATAGTAGCTTTTaGAGGCCAGGATTAATTCTG | + |
Preference number: 4 (lower is better) Translates to: ANSQKQWSSSLNDSKLQLYHSSF*RPGLIL Trigger: CAGAATTAATCCTGGCCTCCAAAAGCTACTATGATA...AAGCTGTAATTTTGAGTCATTTAGTGAAGAAGACCATTGCTTTTGGCTGTTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS TCA 90 bp | AACATATCATCAAACAATCCGCCTCCAAAAGAAAACTCCTGGAAGTaGTGCCTTTGTCTACTAGAACCATCCTGGCGTGTGTGGAAGTGG | + |
Preference number: 5 (lower is better) Translates to: NISSNNPPPKENSWK*CLCLLEPSWRVWKW Trigger: CCACTTCCACACACGCCAGGATGGTTCTAGTAGACAAAGGCATCACTTCCAGGAGTTTTCTTTTGGAGGCGGATTGTTTGATGATATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CAA 90 bp | GATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGATCTCAAAAGGACTCCCATaGCCTCTTTGTCCTTTGCCA | + |
Preference number: 5 (lower is better) Translates to: DRLGEFQLHKTSRIWPMISKGLP*PLCPLP Trigger: TGGCAAAGGACAAAGAGGCAATGGGAGTCCTTTTGA...GATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CAA 90 bp | GATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGATCCTGGAAGTGATGCCTTaGTCTACTAGAACCATCCTG | + |
Preference number: 5 (lower is better) Translates to: DRLGEFQLHKTSRIWPMILEVMP*STRTIL Trigger: CAGGATGGTTCTAGTAGACAAAGGCATCACTTCCAG...GATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CAA 90 bp | GATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGATCCTTTGTCCTTTGCCATaGGTAAAAGCACTGTGTCCA | + |
Preference number: 5 (lower is better) Translates to: DRLGEFQLHKTSRIWPMILCPLP*VKALCP Trigger: TGGACACAGTGCTTTTACCAATGGCAAAGGACAAAG...GATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CAA 90 bp | CGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATGATCAGATCAGGGCTTTTATTTTaGTCAGGGTGGTACTTCATG | + |
Preference number: 5 (lower is better) Translates to: RLGEFQLHKTSRIWPMIRSGLLF*SGWYFM Trigger: CATGAAGTACCACCCTGACAAAAATAAAAGCCCTGA...TCTGATCATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CAA 90 bp | ATAAGATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATCATATTTCCTCTTCGTaGAGTGACAGTCCTGCAGTG | + |
Preference number: 5 (lower is better) Translates to: IRSSGGISVTQNFKDMAYHISSS*SDSPAV Trigger: CACTGCAGGACTGTCACTCAACGAAGAGGAAATATG...ATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATCTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CAA 90 bp | GCAAACAGCCAAAAGCAATGGTCTTCTTCACTAAATGACTCAAAATTACAGCTTGCTCTGAGGCAGACTTaGGCACACCTAAGATATCAT | + |
Preference number: 5 (lower is better) Translates to: ANSQKQWSSSLNDSKLQLALRQT*AHLRYH Trigger: ATGATATCTTAGGTGTGCCAAAGTCTGCCTCAGAGC...AAGCTGTAATTTTGAGTCATTTAGTGAAGAAGACCATTGCTTTTGGCTGTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS-3UTR CAA 90 bp | ATAAGATCGTCTGGGGGAATTTCAGTTACACAAAACTTCAAGGATATGGCCTATTACTCTTTCCGACTATaGGCATCCGAGAGTGTTTCA | + |
Preference number: 5 (lower is better) Translates to: IRSSGGISVTQNFKDMAYYSFRL*ASESVS Trigger: TGAAACACTCTCGGATGCCAATAGTCGGAAAGAGTA...ATAGGCCATATCCTTGAAGTTTTGTGTAACTGAAATTCCCCCAGACGATCTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS CCA 90 bp | GCTCTGAGGCAGACTTTGGCACACCTAAGATATCATAGTAGCTTTTaGAGGCCAGGATTAATTCTGTTATCATTAAAATGCAGATTGCAA | + |
Preference number: 5 (lower is better) Translates to: ALRQTLAHLRYHSSF*RPGLILLSLKCRLQ Trigger: TTGCAATCTGCATTTTAATGATAACAGAATTAATCCTGGCCTCCAAAAGCTACTATGATATCTTAGGTGTGCCAAAGTCTGCCTCAGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015049.5 ENSMUST00000220421.2 |
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CDS CAA 72 bp | TCCGCCTCCAAAAGAAAACTCCTGGAAGTGATGCCTTaGTCTACTAGAACCATCCTGGCGTGTGTGGAAGTG | + |
Preference number: 6 (lower is better) Translates to: SASKRKLLEVMP*STRTILACVEV Trigger: CACTTCCACACACGCCAGGATGGTTCTAGTAGACAAAGGCATCACTTCCAGGAGTTTTCTTTTGGAGGCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS CAA 72 bp | TCAAAAGGACTCCCATTGCCTCTTTGTCCTTTGCCATaGGTAAAAGCACTGTGTCCAATTGTGTCATACTCT | + |
Preference number: 6 (lower is better) Translates to: SKGLPLPLCPLP*VKALCPIVSYS Trigger: AGAGTATGACACAATTGGACACAGTGCTTTTACCAATGGCAAAGGACAAAGAGGCAATGGGAGTCCTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS CAA 72 bp | ACAATCAGTGTATGTAGTAACCATATTTCCTCTTCGTaGAGTGACAGTCCTGCAGTGCTTGCTAGATCCATG | + |
Preference number: 6 (lower is better) Translates to: TISVCSNHISSS*SDSPAVLARSM Trigger: CATGGATCTAGCAAGCACTGCAGGACTGTCACTCAACGAAGAGGAAATATGGTTACTACATACACTGATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS CAA 90 bp | AATGACTGTTCAAAAGGACTCCCATTGCCTCTTTGTCCTTTGCCATaGGTAAAAGCACTGTGTCCAATTGTGTCATACTCTTTCCGACTA | + |
Preference number: 6 (lower is better) Translates to: NDCSKGLPLPLCPLP*VKALCPIVSYSFRL Trigger: TAGTCGGAAAGAGTATGACACAATTGGACACAGTGCTTTTACCAATGGCAAAGGACAAAGAGGCAATGGGAGTCCTTTTGAACAGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015049.5 |
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CDS CCA 72 bp | CAGACTTTGGCACACCTAAGATATCATAGTAGCTTTTaGAGGCCAGGATTAATTCTGTTATCATTAAAATGC | + |
Preference number: 6 (lower is better) Translates to: QTLAHLRYHSSF*RPGLILLSLKC Trigger: GCATTTTAATGATAACAGAATTAATCCTGGCCTCCAAAAGCTACTATGATATCTTAGGTGTGCCAAAGTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015049.5 ENSMUST00000220421.2 |