Pregenerated sensors for DNAJB7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047108Ensembl transcript IDs: ENSMUST00000057236.5
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CAGATCTTTGTGAGTTTAAGGGAAAGCCTTGTCTCCTTAGCAAGACCCACCCCAGCTAGGGCTACAAAGTaGAAACCATATTTCAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: QIFVSLRESLVSLARPTPARATK*KPYFKS Trigger: GCTTTTGAAATATGGTTTCAACTTTGTAGCCCTAGC...TGGGGTGGGTCTTGCTAAGGAGACAAGGCTTTCCCTTAAACTCACAAAGATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR GCA 90 bp | CAGATCTTTGTGAGTTTAAGGGAAAGCCTTGTCTCCTTAGCAAGACCCACCCCAGGGACCCTGCGCCTCTaGCTCTGCTTCCACTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QIFVSLRESLVSLARPTPGTLRL*LCFHWG Trigger: GCCCCAGTGGAAGCAGAGGCAGAGGCGCAGGGTCCC...TGGGGTGGGTCTTGCTAAGGAGACAAGGCTTTCCCTTAAACTCACAAAGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR TCA 90 bp | TTAAGGGAAAGCCTTGTCTCCTTAGCAAGACCCACCCCAGCTAGGGCTACAAAGTGCCAGGGAAGAGAATaGCGTAAGGCCCTCATGCCC | + |
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Preference number: 4 (lower is better) Translates to: LRESLVSLARPTPARATKCQGRE*RKALMP Trigger: GGGCATGAGGGCCTTACGTCATTCTCTTCCCTGGCA...CTTTGTAGCCCTAGCTGGGGTGGGTCTTGCTAAGGAGACAAGGCTTTCCCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CCA 90 bp | GTGAGTTTAAGGGAAAGCCTTGTCTCCTTAGCAAGACCCACCCCAGCTAGGGCTTGCCTCTGCTTCCACTaGGGCTTCTTGAACTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: VSLRESLVSLARPTPARACLCFH*GFLNCL Trigger: TAAACAGTTCAAGAAGCCCCAGTGGAAGCAGAGGCA...AGCCCTAGCTGGGGTGGGTCTTGCTAAGGAGACAAGGCTTTCCCTTAAACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CCA 90 bp | TCCTTAGCAAGACCCACCCCAGCTAGGGCTACAAAGTTGAAACCATATTTCAAACGCTCATCGTCGAGATaGCTTGCACCTCTGCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: SLARPTPARATKLKPYFKRSSSR*LAPLPS Trigger: AGACGGCAGAGGTGCAAGCCATCTCGACGATGAGCG...TTTGAAATATGGTTTCAACTTTGTAGCCCTAGCTGGGGTGGGTCTTGCTAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR TCA 90 bp | GGTAGTGTACACCTTCAATCCCAGCAACAGAGAGGCAGAGATAAGCAGATCTTTCTCAAAGAGGTGGAATaGAAACGGATCCCTTTCACC | + |
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Preference number: 4 (lower is better) Translates to: GSVHLQSQQQRGRDKQIFLKEVE*KRIPFT Trigger: GGTGAAAGGGATCCGTTTTCATTCCACCTCTTTGAG...AAAGATCTGCTTATCTCTGCCTCTCTGTTGCTGGGATTGAAGGTGTACACTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR TCA 90 bp | CAGATCTTTGTGAGTTTAAGGGAAAGCCTTGTCTCCTTAGCAAGACCCACCCCAGTTCCTTCTTGTTGGTaGCCCAAGATGTTCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QIFVSLRESLVSLARPTPVPSCW*PKMFLV Trigger: AACAAGGAACATCTTGGGTCACCAACAAGAAGGAAC...TGGGGTGGGTCTTGCTAAGGAGACAAGGCTTTCCCTTAAACTCACAAAGATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR TCA 90 bp | GGTAGTGTACACCTTCAATCCCAGCAACAGAGAGGCAGAGATAAGCAGATCTTTTTTAATGTCTTCTGGTaGCGCATATCTCTGCACTCC | + |
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Preference number: 4 (lower is better) Translates to: GSVHLQSQQQRGRDKQIFFNVFW*RISLHS Trigger: GGAGTGCAGAGATATGCGTCACCAGAAGACATTAAA...AAAGATCTGCTTATCTCTGCCTCTCTGTTGCTGGGATTGAAGGTGTACACTACC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR TCA 90 bp | AGTGTACACCTTCAATCCCAGCAACAGAGAGGCAGAGATAAGCAGATCTTTGTGGCTGTAGGAATTTGGTaGGTAATTGTTGAACGACTG | + |
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Preference number: 4 (lower is better) Translates to: SVHLQSQQQRGRDKQIFVAVGIW*VIVERL Trigger: CAGTCGTTCAACAATTACTCACCAAATTCCTACAGC...CACAAAGATCTGCTTATCTCTGCCTCTCTGTTGCTGGGATTGAAGGTGTACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CCA 90 bp | TCCTTAGCAAGACCCACCCCAGCTAGGGCTACAAAGTTGAAACCATATTTCAAAATCCTGCTGAGAAAATaGAAGGTTCCTTCTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLARPTPARATKLKPYFKILLRK*KVPSCW Trigger: CCAACAAGAAGGAACCTTCCATTTTCTCAGCAGGAT...TTTGAAATATGGTTTCAACTTTGTAGCCCTAGCTGGGGTGGGTCTTGCTAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CCA 90 bp | GGTAGTGTACACCTTCAATCCCAGCAACAGAGAGGCAGAGATAAGCAGATCTTTAGTGATTCCTTTTGTTaGACTTCTTCTTCTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GSVHLQSQQQRGRDKQIFSDSFC*TSSSSA Trigger: GGCAGAAGAAGAAGAAGTCCAACAAAAGGAATCACT...AAAGATCTGCTTATCTCTGCCTCTCTGTTGCTGGGATTGAAGGTGTACACTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR TCA 90 bp | AGTGTACACCTTCAATCCCAGCAACAGAGAGGCAGAGATAAGCAGATCTTTGTGATATTGAGTTGTATTTaGGGAGCTGTAGGAATTTGG | + |
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Preference number: 4 (lower is better) Translates to: SVHLQSQQQRGRDKQIFVILSCI*GAVGIW Trigger: CCAAATTCCTACAGCTCCTCAAATACAACTCAATAT...CACAAAGATCTGCTTATCTCTGCCTCTCTGTTGCTGGGATTGAAGGTGTACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR TCA 90 bp | GGTAGTGTACACCTTCAATCCCAGCAACAGAGAGGCAGAGATAAGCAGATCTTTTTCTTTAAATCCTGCTaGGAAAATGGAAGGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GSVHLQSQQQRGRDKQIFFFKSC*ENGRFL Trigger: AAGGAACCTTCCATTTTCTCAGCAGGATTTAAAGAA...AAAGATCTGCTTATCTCTGCCTCTCTGTTGCTGGGATTGAAGGTGTACACTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR GCA 90 bp | AGTGTACACCTTCAATCCCAGCAACAGAGAGGCAGAGATAAGCAGATCTTTGTGAGGATGCCATTTAAGTaGTACTTTACGATAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SVHLQSQQQRGRDKQIFVRMPFK*YFTISS Trigger: AGAGCTTATCGTAAAGTAGCACTTAAATGGCATCCT...CACAAAGATCTGCTTATCTCTGCCTCTCTGTTGCTGGGATTGAAGGTGTACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR GCA 90 bp | AAGCAGATCTTTGTGAGTTTAAGGGAAAGCCTTGTCTCCTTAGCAAGACCCACCCATTTGTCTGTAAAATaGTCTTCATTTGCCACACTA | + |
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Preference number: 4 (lower is better) Translates to: KQIFVSLRESLVSLARPTHLSVK*SSFATL Trigger: TAGTGTGGCAAATGAAGAGCATTTTACAGACAAATG...GGTGGGTCTTGCTAAGGAGACAAGGCTTTCCCTTAAACTCACAAAGATCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS CCA 90 bp | TCTGCCTTCCGGAATGTGAAGCGGTACTCACGCTCATCGTCGAGATaGCTTGCACCTCTGCCGTCTAATCCTTCCTTGCCGTATTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SAFRNVKRYSRSSSR*LAPLPSNPSLPYLS Trigger: TGACAAATACGGCAAGGAAGGATTAGACGGCAGAGGTGCAAGCCATCTCGACGATGAGCGTGAGTACCGCTTCACATTCCGGAAGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CAA 90 bp | TTAGCAAGACCCACCCCAGCTAGGGCTACAAAGTTGAAACCATATTTCAAAAGCCATCGTCGAGATGGCTaGCACCTCTGCCGTCTAATC | + |
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Preference number: 5 (lower is better) Translates to: LARPTPARATKLKPYFKSHRRDG*HLCRLI Trigger: GATTAGACGGCAGAGGTGCAAGCCATCTCGACGATG...GCTTTTGAAATATGGTTTCAACTTTGTAGCCCTAGCTGGGGTGGGTCTTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CAA 90 bp | GTGAGTTTAAGGGAAAGCCTTGTCTCCTTAGCAAGACCCACCCCAGCTAGGGCTCTTCCATTAATAACTTaGCCTGAAGGTGTAATGGGT | + |
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Preference number: 5 (lower is better) Translates to: VSLRESLVSLARPTPARALPLIT*PEGVMG Trigger: ACCCATTACACCTTCAGGCAAAGTTATTAATGGAAG...AGCCCTAGCTGGGGTGGGTCTTGCTAAGGAGACAAGGCTTTCCCTTAAACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CAA 90 bp | GGTAGTGTACACCTTCAATCCCAGCAACAGAGAGGCAGAGATAAGCAGATCTTTGACCCAAGATGTTCCTaGTTCATTGTTGTCCACCAG | + |
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Preference number: 5 (lower is better) Translates to: GSVHLQSQQQRGRDKQIFDPRCS*FIVVHQ Trigger: CTGGTGGACAACAATGAACAAGGAACATCTTGGGTC...AAAGATCTGCTTATCTCTGCCTCTCTGTTGCTGGGATTGAAGGTGTACACTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CAA 90 bp | GATCTTTGTGAGTTTAAGGGAAAGCCTTGTCTCCTTAGCAAGACCCACCCCAGCTTCAGCTTCTCTTTCTaGACGGTTCTCAAAAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: DLCEFKGKPCLLSKTHPSFSFSF*TVLKSF Trigger: AAAGCTTTTGAGAACCGTCAAGAAAGAGAAGCTGAA...GCTGGGGTGGGTCTTGCTAAGGAGACAAGGCTTTCCCTTAAACTCACAAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CAA 90 bp | CAGATCTTTGTGAGTTTAAGGGAAAGCCTTGTCTCCTTAGCAAGACCCACCCCACCCGTTTCTCAACATTaGATAACACTTCATATGCCT | + |
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Preference number: 5 (lower is better) Translates to: QIFVSLRESLVSLARPTPPVSQH*ITLHMP Trigger: AGGCATATGAAGTGTTATCAAATGTTGAGAAACGGG...TGGGGTGGGTCTTGCTAAGGAGACAAGGCTTTCCCTTAAACTCACAAAGATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CAA 90 bp | GGTAGTGTACACCTTCAATCCCAGCAACAGAGAGGCAGAGATAAGCAGATCTTTCCAGAGTATATTGAGTaGTATTTGAGGAGCTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: GSVHLQSQQQRGRDKQIFPEYIE*YLRSCR Trigger: CCTACAGCTCCTCAAATACAACTCAATATACTCTGG...AAAGATCTGCTTATCTCTGCCTCTCTGTTGCTGGGATTGAAGGTGTACACTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS-3UTR CAA 90 bp | CAGATCTTTGTGAGTTTAAGGGAAAGCCTTGTCTCCTTAGCAAGACCCACCCCACTTCTCCAGTTACATTaGTCTGTAAAATGCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: QIFVSLRESLVSLARPTPLLQLH*SVKCSS Trigger: TGAAGAGCATTTTACAGACAAATGTAACTGGAGAAG...TGGGGTGGGTCTTGCTAAGGAGACAAGGCTTTCCCTTAAACTCACAAAGATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS GCA 72 bp | GGTCATAGGCGCGGGAGACGTGGGACCCTGCGCCTCTaGCTCTGCTTCCACTGGGGCTTCTTGAACTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: GHRRGRRGTLRL*LCFHWGFLNCL Trigger: TAAACAGTTCAAGAAGCCCCAGTGGAAGCAGAGGCAGAGGCGCAGGGTCCCACGTCTCCCGCGCCTATGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS CCA 72 bp | CGGAATGTGAAGCGGTACTCACGCTCATCGTCGAGATaGCTTGCACCTCTGCCGTCTAATCCTTCCTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: RNVKRYSRSSSR*LAPLPSNPSLP Trigger: CGGCAAGGAAGGATTAGACGGCAGAGGTGCAAGCCATCTCGACGATGAGCGTGAGTACCGCTTCACATTCCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS CAA 90 bp | CCACCTTCTTTAAATCCTGCTGAGAAAATGGAAGGTTCCTTCTTGTaGGTGACCCAAGATGTTCCTTGTTCATTGTTGTCCACCAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: PPSLNPAEKMEGSFL*VTQDVPCSLLSTRV Trigger: TACTCTGGTGGACAACAATGAACAAGGAACATCTTGGGTCACCAACAAGAAGGAACCTTCCATTTTCTCAGCAGGATTTAAAGAAGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS CAA 90 bp | CTACCACCTTCTTTAAATCCTGCTGAGAAAATGGAAGGTTCCTTCTaGTTGGTGACCCAAGATGTTCCTTGTTCATTGTTGTCCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: LPPSLNPAEKMEGSF*LVTQDVPCSLLSTR Trigger: TCTGGTGGACAACAATGAACAAGGAACATCTTGGGTCACCAACAAGAAGGAACCTTCCATTTTCTCAGCAGGATTTAAAGAAGGTGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS CAA 72 bp | GGAAGGTTCCTTCTTGTTGGTGACCCAAGATGTTCCTaGTTCATTGTTGTCCACCAGAGTATATTGAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: GRFLLVGDPRCS*FIVVHQSILSC Trigger: ACAACTCAATATACTCTGGTGGACAACAATGAACAAGGAACATCTTGGGTCACCAACAAGAAGGAACCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS CAA 72 bp | TTCCTTGTTCATTGTTGTCCACCAGAGTATATTGAGTaGTATTTGAGGAGCTGTAGGAATTTGGTGAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: FLVHCCPPEYIE*YLRSCRNLVSN Trigger: ATTACTCACCAAATTCCTACAGCTCCTCAAATACAACTCAATATACTCTGGTGGACAACAATGAACAAGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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| CDS GCA 72 bp | AACGACTGTCTTCTCCAGTTACATTTGTCTGTAAAATaGTCTTCATTTGCCACACTATTTACAAGAAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: NDCLLQLHLSVK*SSFATLFTRKD Trigger: ATCCTTTCTTGTAAATAGTGTGGCAAATGAAGAGCATTTTACAGACAAATGTAACTGGAGAAGACAGTCGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057236.5 |
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