Pregenerated sensors for DNAJB5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036052Ensembl transcript IDs: ENSMUST00000037872.10, ENSMUST00000084662.12, ENSMUST00000098112.9, ENSMUST00000107973.3
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTaGGTGTGGGGGTATTGCTGTGGTAGGCTCCAGACTGGCCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: CQCPVDIQPGPREMG*VWGYCCGRLQTGQG Trigger: GCCCTGGCCAGTCTGGAGCCTACCACAGCAATACCCCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR TCA 90 bp | AGGTTGACCGGCTTTCCTGGGGTGCCCAGGACCCTGGAAGGAGGCTaGCAGTGGCTCTGTGTTCCTGCCTGCACCAGGGTTACTGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: RLTGFPGVPRTLEGG*QWLCVPACTRVTAS Trigger: AGAAGCAGTAACCCTGGTGCAGGCAGGAACACAGAGCCACTGTCAGCCTCCTTCCAGGGTCCTGGGCACCCCAGGAAAGCCGGTCAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR CCA 90 bp | AAAAGTGCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATaGGGTGAGTGTGGGGGTATTGCTGTGGTAGGCTCCAGACTGGCC | + |
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Preference number: 1 (lower is better) Translates to: KSASVQWTSSRVHVR*GECGGIAVVGSRLA Trigger: GGCCAGTCTGGAGCCTACCACAGCAATACCCCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGCACTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR CCA 90 bp | CGGACACTTGTGCAGTGGCCTCGGACACTACAGACCCACCCGGGGTaGGGTGGGAAGCGGTGTCCTTTCTATCCTCTTTCTCCAGAAACA | + |
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Preference number: 1 (lower is better) Translates to: RTLVQWPRTLQTHPG*GGKRCPFYPLSPET Trigger: TGTTTCTGGAGAAAGAGGATAGAAAGGACACCGCTTCCCACCCCACCCCGGGTGGGTCTGTAGTGTCCGAGGCCACTGCACAAGTGTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR GCA 90 bp | CTTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTaGACGGACACTTGTGCAGTGGCCTCGGACACTACAGACCCACCC | + |
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Preference number: 1 (lower is better) Translates to: LVSRRDRDHFGKCFV*TDTCAVASDTTDPP Trigger: GGGTGGGTCTGTAGTGTCCGAGGCCACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR GCA 90 bp | GCCGTCTCCAGCGCACTTGGTAGCCAGGCTCTATTTTTGGGAGTGTaGCTATTCTCATCAGTGAGAAAGCCCTCCACGTCCTGCAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: AVSSALGSQALFLGV*LFSSVRKPSTSCKE Trigger: TTCCTTGCAGGACGTGGAGGGCTTTCTCACTGATGAGAATAGGCACACTCCCAAAAATAGAGCCTGGCTACCAAGTGCGCTGGAGACGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR TCA 90 bp | CTGTTGGGGAGGCTCCTGAGTGTTGGCTCACTTCCCTGCCCCAAATaGAAAGTGTCTCGTGCTCAAAGAACAGCCTTGTTCACAGGTAAC | + |
|
Preference number: 1 (lower is better) Translates to: LLGRLLSVGSLPCPK*KVSRAQRTALFTGN Trigger: GTTACCTGTGAACAAGGCTGTTCTTTGAGCACGAGACACTTTTCATTTGGGGCAGGGAAGTGAGCCAACACTCAGGAGCCTCCCCAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR TCA 90 bp | TTGGTAGCCAGGCTCTATTTTTGGGAGTGTGCCTATTCTCATCAGTaGGAAAGCCCTCCACGTCCTGCAAGGAACAGTGTCTCTAATTCA | + |
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Preference number: 1 (lower is better) Translates to: LVARLYFWECAYSHQ*ESPPRPARNSVSNS Trigger: TGAATTAGAGACACTGTTCCTTGCAGGACGTGGAGGGCTTTCTCACTGATGAGAATAGGCACACTCCCAAAAATAGAGCCTGGCTACCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR TCA 90 bp | CGGGGTGGGGTGGGAAGCGGTGTCCTTTCTATCCTCTTTCTCCAGAAACAGGAGCCAGCCGGGTCCACGTaGGATGGGGTGAGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RGGVGSGVLSILFLQKQEPAGST*DGVSVG Trigger: CCCCACACTCACCCCATCTCACGTGGACCCGGCTGG...CTCCTGTTTCTGGAGAAAGAGGATAGAAAGGACACCGCTTCCCACCCCACCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR TCA 90 bp | CACTCCCCAGAGCAGCTGAGGGGGACAGATCCTCCAACTCTGTGCGGTGCAGGCTGTTGGGGAGGCTCCTaGGTGTTGGCTCACTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: HSPEQLRGTDPPTLCGAGCWGGS*VLAHFP Trigger: AGGGAAGTGAGCCAACACTCAGGAGCCTCCCCAACA...GCCTGCACCGCACAGAGTTGGAGGATCTGTCCCCCTCAGCTGCTCTGGGGAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGGAACTGTGTTTAATGTCCATCATGGAGCCCAGGTCCCCAGCCAGGACCGTTGACCGGCTTTCCTaGGGTGCCCAGGACCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: EQELCLMSIMEPRSPARTVDRLS*GAQDPG Trigger: TCCAGGGTCCTGGGCACCCCAGGAAAGCCGGTCAAC...GGTCCTGGCTGGGGACCTGGGCTCCATGATGGACATTAAACACAGTTCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR TCA 90 bp | CGGGGTGGGGTGGGAAGCGGTGTCCTTTCTATCCTCTTTCTCCAGAAACAGGAGCCACGTGAGATGGGGTaGGTGTGGGGGTATTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: RGGVGSGVLSILFLQKQEPREMG*VWGYCC Trigger: ACAGCAATACCCCCACACTCACCCCATCTCACGTGG...CTCCTGTTTCTGGAGAAAGAGGATAGAAAGGACACCGCTTCCCACCCCACCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR TCA 90 bp | CACTCCCCAGAGCAGCTGAGGGGGACAGATCCTCCAACTCTGTGCGGTGCAGGCTGGATTCAAAGCACGTaGCAGAAAATTGACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: HSPEQLRGTDPPTLCGAGWIQST*QKIDPW Trigger: CCAGGGGTCAATTTTCTGTCACGTGCTTTGAATCCA...GCCTGCACCGCACAGAGTTGGAGGATCTGTCCCCCTCAGCTGCTCTGGGGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGAACTGTGTTTAATGTCCATCATGGAGCCCAGGTCCCCAGCCAGGACCACCCTGGAAGGAGGCTaGCAGTGGCTCTGTGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: EQELCLMSIMEPRSPARTTLEGG*QWLCVP Trigger: AGGAACACAGAGCCACTGTCAGCCTCCTTCCAGGGT...GGTCCTGGCTGGGGACCTGGGCTCCATGATGGACATTAAACACAGTTCCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR GCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTCCGGCTTTCCTGGGGTaGCCAGGACCCTGGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LTASEGAGPSFSQSRVSFPAFLG*PGPWKE Trigger: CTCCTTCCAGGGTCCTGGGCACCCCAGGAAAGCCGG...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR CCA 90 bp | TTGGCTCACTTCCCTGCCCCAAATGAAAAGTGTCTCGTGCTCAAAGAACAGCCTCAGACCCACCCGGGGTaGGGTGGGAAGCGGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LAHFPAPNEKCLVLKEQPQTHPG*GGKRCP Trigger: AGGACACCGCTTCCCACCCCACCCCGGGTGGGTCTG...AGGCTGTTCTTTGAGCACGAGACACTTTTCATTTGGGGCAGGGAAGTGAGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTTTCTCCCAGCTCCTTCACTATTCGACTTCTATACAACTGTGGGAGTGGGGCCAGCCGGGTCCACGTaGGATGGGGTGAGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SFLPAPSLFDFYTTVGVGPAGST*DGVSVG Trigger: CCCCACACTCACCCCATCTCACGTGGACCCGGCTGG...CCCCACTCCCACAGTTGTATAGAAGTCGAATAGTGAAGGAGCTGGGAGAAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR TCA 90 bp | CGGGGTGGGGTGGGAAGCGGTGTCCTTTCTATCCTCTTTCTCCAGAAACAGGAGCACGTGACAGAAAATTaGCCCCTGGTCTGGGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: RGGVGSGVLSILFLQKQEHVTEN*PLVWAS Trigger: GCTAGCCCAGACCAGGGGTCAATTTTCTGTCACGTG...CTCCTGTTTCTGGAGAAAGAGGATAGAAAGGACACCGCTTCCCACCCCACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGAACTGTGTTTAATGTCCATCATGGAGCCCAGGTCCCCAGCCAGGACCCACCCCAAGACCAGCTaGAGCAGTTTTCTCCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: EQELCLMSIMEPRSPARTHPKTS*SSFLPA Trigger: AGCTGGGAGAAAACTGCTTCAGCTGGTCTTGGGGTG...GGTCCTGGCTGGGGACCTGGGCTCCATGATGGACATTAAACACAGTTCCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGAACTGTGTTTAATGTCCATCATGGAGCCCAGGTCCCCAGCCAGGACCGCCTATTCTCATCAGTaGGAAAGCCCTCCACGTCCT | + |
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Preference number: 2 (lower is better) Translates to: EQELCLMSIMEPRSPARTAYSHQ*ESPPRP Trigger: AGGACGTGGAGGGCTTTCTCACTGATGAGAATAGGC...GGTCCTGGCTGGGGACCTGGGCTCCATGATGGACATTAAACACAGTTCCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR CCA 90 bp | CGGGGTGGGGTGGGAAGCGGTGTCCTTTCTATCCTCTTTCTCCAGAAACAGGAGCAGAAAATTGACCCCTaGTCTGGGCTAGCTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: RGGVGSGVLSILFLQKQEQKIDP*SGLALP Trigger: GGGAAGAGCTAGCCCAGACCAGGGGTCAATTTTCTG...CTCCTGTTTCTGGAGAAAGAGGATAGAAAGGACACCGCTTCCCACCCCACCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTGTGTTAGCTCTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCGAGGCTCCTGAGTGTTaGCTCACTTCCCTGCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: TSVLALVLTASEGAGPSFEAPEC*LTSLPQ Trigger: TTGGGGCAGGGAAGTGAGCCAACACTCAGGAGCCTC...GAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAGAGCTAACACACTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACCACGTGAGATGGGGTaGGTGTGGGGGTATTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LSPGETETILANASCARTPREMG*VWGYCC Trigger: ACAGCAATACCCCCACACTCACCCCATCTCACGTGG...TGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR TCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTCCACGTGAGATGGGGTaGGTGTGGGGGTATTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LTASEGAGPSFSQSRVSFPREMG*VWGYCC Trigger: ACAGCAATACCCCCACACTCACCCCATCTCACGTGG...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR GCA 90 bp | CACTCCCCAGAGCAGCTGAGGGGGACAGATCCTCCAACTCTGTGCGGTGCAGGCATGAAAAGTGTCTCGTaGTCAAAGAACAGCCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: HSPEQLRGTDPPTLCGAGMKSVS*SKNSLV Trigger: AACAAGGCTGTTCTTTGAGCACGAGACACTTTTCAT...GCCTGCACCGCACAGAGTTGGAGGATCTGTCCCCCTCAGCTGCTCTGGGGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGCTCACTTCCCTGCCCCAAATGAAAAGTGTCTCGTGCTCAAAGAACAGCCTAGTGCCAGTGTCCAGTaGACATCCAGCCGGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LAHFPAPNEKCLVLKEQPSASVQ*TSSRVH Trigger: GTGGACCCGGCTGGATGTCCACTGGACACTGGCACT...AGGCTGTTCTTTGAGCACGAGACACTTTTCATTTGGGGCAGGGAAGTGAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCAGTGAGTGCCAGTGTCCAGTaGACATCCAGCCGGGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: RDRDHFGKCFVCTDTCAVSASVQ*TSSRVH Trigger: GTGGACCCGGCTGGATGTCCACTGGACACTGGCACT...CACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR CCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTCGGACACTTGTGCAGTaGCCTCGGACACTACAGACC | + |
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Preference number: 2 (lower is better) Translates to: LTASEGAGPSFSQSRVSFRTLVQ*PRTLQT Trigger: GGTCTGTAGTGTCCGAGGCCACTGCACAAGTGTCCG...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR TCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTCACCCCAAGACCAGCTaGAGCAGTTTTCTCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LTASEGAGPSFSQSRVSFHPKTS*SSFLPA Trigger: AGCTGGGAGAAAACTGCTTCAGCTGGTCTTGGGGTG...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR CCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTACTTCTATACAACTGTaGGAGTGGGGTGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LTASEGAGPSFSQSRVSFTSIQL*EWGGVG Trigger: CCCCACCCCACCCCACTCCCACAGTTGTATAGAAGT...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTCACTTCCCTGCCCCAAATGAAAAGTGTCTCGTGCTCAAAGAACAGCCTCACGTGACAGAAAATTaGCCCCTGGTCTGGGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LAHFPAPNEKCLVLKEQPHVTEN*PLVWAS Trigger: GCTAGCCCAGACCAGGGGTCAATTTTCTGTCACGTG...AGGCTGTTCTTTGAGCACGAGACACTTTTCATTTGGGGCAGGGAAGTGAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTTTCTCCCAGCTCCTTCACTATTCGACTTCTATACAACTGTGGGAGTGGGGTGTTGGGGAGGCTCCTaGGTGTTGGCTCACTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: SFLPAPSLFDFYTTVGVGCWGGS*VLAHFP Trigger: AGGGAAGTGAGCCAACACTCAGGAGCCTCCCCAACA...CCCCACTCCCACAGTTGTATAGAAGTCGAATAGTGAAGGAGCTGGGAGAAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACAGAAAATTGACCCCTaGTCTGGGCTAGCTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: LSPGETETILANASCARTQKIDP*SGLALP Trigger: GGGAAGAGCTAGCCCAGACCAGGGGTCAATTTTCTG...TGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR GCA 90 bp | AGAACAGCCTTGTTCACAGGTAACGGGCCTTCCCTTCCTATCTCCTGTCCTTTCAGAGGGAGGAGGGCATaGTATTTACAGGCAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: RTALFTGNGPSLPISCPFRGRRA*YLQAGQ Trigger: TTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCT...GAAAGGACAGGAGATAGGAAGGGAAGGCCCGTTACCTGTGAACAAGGCTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR GCA 90 bp | CTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGCAGGGTTACTGCTTCTaGGCAGAGGCTATATTTTTA | + |
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Preference number: 2 (lower is better) Translates to: LVLTASEGAGPSFSQSRVQGYCF*AEAIFL Trigger: TAAAAATATAGCCTCTGCGCAGAAGCAGTAACCCTG...CACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR CCA 90 bp | CTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTTGGGGTATATGTTCTaGAATTCCAAGAGGTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LVLTASEGAGPSFSQSRVLGYMF*NSKRSE Trigger: CTCTGACCTCTTGGAATTCCAGAACATATACCCCAA...CACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR GCA 90 bp | GTCCTTTCTTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGAGAGGGAGGAGGGCATaGTATTTACAGGCAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: VLSCLPERQRPFWQMLRVRGRRA*YLQAGQ Trigger: TTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCT...CACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAAGAAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCAGTGTGGATTCAAAGCACGTaGCAGAAAATTGACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RDRDHFGKCFVCTDTCAVWIQST*QKIDPW Trigger: CCAGGGGTCAATTTTCTGTCACGTGCTTTGAATCCA...CACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR CCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTCACATATCACAAAAGTaGGGCTTGGAAGTTTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LTASEGAGPSFSQSRVSFHISQK*GLEVWG Trigger: ACCCCAAACTTCCAAGCCCCACTTTTGTGATATGTG...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTCACTTCCCTGCCCCAAATGAAAAGTGTCTCGTGCTCAAAGAACAGCCTACAGGAACAGTCTCCTaGAAATCAGTGGCTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: LAHFPAPNEKCLVLKEQPTGTVS*KSVALH Trigger: ATGCAAAGCCACTGATTTTCAGGAGACTGTTCCTGT...AGGCTGTTCTTTGAGCACGAGACACTTTTCATTTGGGGCAGGGAAGTGAGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTTTCTCCCAGCTCCTTCACTATTCGACTTCTATACAACTGTGGGAGTGGGGTGGATTCAAAGCACGTaGCAGAAAATTGACCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SFLPAPSLFDFYTTVGVGWIQST*QKIDPW Trigger: CCAGGGGTCAATTTTCTGTCACGTGCTTTGAATCCA...CCCCACTCCCACAGTTGTATAGAAGTCGAATAGTGAAGGAGCTGGGAGAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCTCACTTCCCTGCCCCAAATGAAAAGTGTCTCGTGCTCAAAGAACAGCCTAGACAGAGACCATTTTaGCAAATGCTTCGTGTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LAHFPAPNEKCLVLKEQPRQRPF*QMLRVH Trigger: GTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCT...AGGCTGTTCTTTGAGCACGAGACACTTTTCATTTGGGGCAGGGAAGTGAGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| 3UTR TCA 72 bp | CCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTaGGTGTGGGGGTATTGCTGTGGTAGGCTCCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: PVDIQPGPREMG*VWGYCCGRLQT Trigger: AGTCTGGAGCCTACCACAGCAATACCCCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| 3UTR GCA 72 bp | GACCCTGGAAGGAGGCTGACAGTGGCTCTGTGTTCCTaGCTGCACCAGGGTTACTGCTTCTGCGCAGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DPGRRLTVALCS*LHQGYCFCAEA Trigger: AGCCTCTGCGCAGAAGCAGTAACCCTGGTGCAGGCAGGAACACAGAGCCACTGTCAGCCTCCTTCCAGGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| 3UTR CCA 72 bp | TTGGCAAATGCTTCGTGTGCACGGACACTTGTGCAGTaGCCTCGGACACTACAGACCCACCCGGGGTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LANASCARTLVQ*PRTLQTHPGWG Trigger: ACCCCACCCCGGGTGGGTCTGTAGTGTCCGAGGCCACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| 3UTR TCA 72 bp | CAGGTTCCTGACGAGGCTGGACTTGTTAGATCCCCGTaGGCAGTTGTGAGCCGCCTGATGTGTCCTGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QVPDEAGLVRSP*AVVSRLMCPGN Trigger: GTTCCCAGGACACATCAGGCGGCTCACAACTGCTCACGGGGATCTAACAAGTCCAGCCTCGTCAGGAACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAGGAACTGTGTTTAATGTCCATCATGGAGCCCAGGTCCCCAGCCAGGACCGTGTTAGCTCTCGTGTaGACAGCTTCTGAAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: EQELCLMSIMEPRSPARTVLALV*TASEGA Trigger: AGCCCCTTCAGAAGCTGTCAACACGAGAGCTAACAC...GGTCCTGGCTGGGGACCTGGGCTCCATGATGGACATTAAACACAGTTCCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| 3UTR GCA 72 bp | CGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTaGACGGACACTTGTGCAGTGGCCTCGGACACTACA | + |
|
Preference number: 3 (lower is better) Translates to: RRDRDHFGKCFV*TDTCAVASDTT Trigger: TGTAGTGTCCGAGGCCACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| 3UTR TCA 72 bp | TCCAGCCACTGCAGTGGGAACTGGATTCAAAGCACGTaGCAGAAAATTGACCCCTGGTCTGGGCTAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSHCSGNWIQST*QKIDPWSGLAL Trigger: AAGAGCTAGCCCAGACCAGGGGTCAATTTTCTGTCACGTGCTTTGAATCCAGTTCCCACTGCAGTGGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| 3UTR GCA 72 bp | AGCGCACTTGGTAGCCAGGCTCTATTTTTGGGAGTGTaGCTATTCTCATCAGTGAGAAAGCCCTCCACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SALGSQALFLGV*LFSSVRKPSTS Trigger: GGACGTGGAGGGCTTTCTCACTGATGAGAATAGGCACACTCCCAAAAATAGAGCCTGGCTACCAAGTGCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| 3UTR TCA 72 bp | AGGCTCCTGAGTGTTGGCTCACTTCCCTGCCCCAAATaGAAAGTGTCTCGTGCTCAAAGAACAGCCTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RLLSVGSLPCPK*KVSRAQRTALF Trigger: GAACAAGGCTGTTCTTTGAGCACGAGACACTTTTCATTTGGGGCAGGGAAGTGAGCCAACACTCAGGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| 3UTR TCA 72 bp | TTAGACAAGTGTGTTAGCTCTCGTGTTGACAGCTTCTaGAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LDKCVSSRVDSF*RGWALFLTIEG Trigger: ACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAGAGCTAACACACTTGTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| 3UTR CCA 72 bp | GTCCTTTCTTGTCTCCCGGAGAGACAGAGACCATTTTaGCAAATGCTTCGTGTGCACGGACACTTGTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: VLSCLPERQRPF*QMLRVHGHLCS Trigger: ACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAAGAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| 3UTR TCA 72 bp | AGGCTCTATTTTTGGGAGTGTGCCTATTCTCATCAGTaGGAAAGCCCTCCACGTCCTGCAAGGAACAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RLYFWECAYSHQ*ESPPRPARNSV Trigger: GACACTGTTCCTTGCAGGACGTGGAGGGCTTTCTCACTGATGAGAATAGGCACACTCCCAAAAATAGAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| 3UTR GCA 72 bp | GGAAAAGTGTTAGCAAGGCTCAGAGGGAGGAGGGCATaGTATTTACAGGCAGGACAAGGAATCTATAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GKVLARLRGRRA*YLQAGQGIYSS Trigger: GGAGCTATAGATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCTGAGCCTTGCTAACACTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| 3UTR CCA 72 bp | TTTCTCACAATCGAGGGTGTCTTTTTCATAGGCAGCTaGGCTGTGGCTTCTAGCGTTGTCGTTTGGGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: FLTIEGVFFIGS*AVASSVVVWGI Trigger: TATACCCCAAACGACAACGCTAGAAGCCACAGCCCAGCTGCCTATGAAAAAGACACCCTCGATTGTGAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR TCA 90 bp | GCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGCAGGGTCAAAGCCACTaGAGGGCCGAGTGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASVQWTSSRVHVRWGECGQGQSH*RAEWSG Trigger: GCCGCTCCACTCGGCCCTTCAGTGGCTTTGACCCTG...CCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | GCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGGGGGGTCCTGTACCTTaGGCCGGGGGTACAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASVQWTSSRVHVRWGECGGGPVP*AGGTVA Trigger: AGCCACTGTACCCCCGGCGCAAGGTACAGGACCCCC...CCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGC 66% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | CACTCCCCAGAGCAGCTGAGGGGGACAGATCCTCCAACTCTGTGCGGTGCAGGCGGGGGTCCTGTACCTTaGGCCGGGGGTACAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSPEQLRGTDPPTLCGAGGGPVP*AGGTVA Trigger: AGCCACTGTACCCCCGGCGCAAGGTACAGGACCCCC...GCCTGCACCGCACAGAGTTGGAGGATCTGTCCCCCTCAGCTGCTCTGGGGAGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | GTCCACGTGAGATGGGGTGAGTGTGGGGGTATTGCTGTGGTAGGCTCCAGACTGGCGCCGGGGGTACAGTaGCTCTGGGGCTCGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHVRWGECGGIAVVGSRLAPGVQ*LWGSPW Trigger: CCAAGGCGAGCCCCAGAGCCACTGTACCCCCGGCGC...CAGTCTGGAGCCTACCACAGCAATACCCCCACACTCACCCCATCTCACGTGGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR TCA 90 bp | GTCCACGTGAGATGGGGTGAGTGTGGGGGTATTGCTGTGGTAGGCTCCAGACTGCAGGGTCAAAGCCACTaGAGGGCCGAGTGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VHVRWGECGGIAVVGSRLQGQSH*RAEWSG Trigger: GCCGCTCCACTCGGCCCTTCAGTGGCTTTGACCCTG...CAGTCTGGAGCCTACCACAGCAATACCCCCACACTCACCCCATCTCACGTGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | GCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGGAGCAGGGGAGGTGCTaGTTAAGGATCTGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASVQWTSSRVHVRWGECGEQGRC*LRICRV Trigger: GACACGGCAGATCCTTAAGCAGCACCTCCCCTGCTC...CCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | CGCCCTCCCATTCCCCCAAAGCAGCCCAGCTCCGAAAGGGGTCGGGAACAGGAAGGATGTTGTCAGGTGTaGCGTCGCCCTCTTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPPIPPKQPSSERGREQEGCCQV*RRPLWG Trigger: TCCCCAAAGAGGGCGACGCCACACCTGACAACATCC...TTCCTGTTCCCGACCCCTTTCGGAGCTGGGCTGCTTTGGGGGAATGGGAGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGGGATGTTGTCAGGTGTaGCGTCGCCCTCTTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASVQWTSSRVHVRWGECGGCCQV*RRPLWG Trigger: TCCCCAAAGAGGGCGACGCCACACCTGACAACATCC...CCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | CCGGGGTGGGGTGGGAAGCGGTGTCCTTTCTATCCTCTTTCTCCAGAAACAGGAGGGGGTCCTGTACCTTaGGCCGGGGGTACAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGWGGKRCPFYPLSPETGGGPVP*AGGTVA Trigger: AGCCACTGTACCCCCGGCGCAAGGTACAGGACCCCC...TCCTGTTTCTGGAGAAAGAGGATAGAAAGGACACCGCTTCCCACCCCACCCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | CCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCGCGCCGGGGGTACAGTaGCTCTGGGGCTCGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PERQRPFWQMLRVHGHLCAPGVQ*LWGSPW Trigger: CCAAGGCGAGCCCCAGAGCCACTGTACCCCCGGCGC...GCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGCACTGTAGAGCACGTTaGTGCCATCTCGGCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASVQWTSSRVHVRWGECGHCRAR*CHLGGS Trigger: ACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTG...CCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR TCA 90 bp | GTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGGGTATTCGGCGGAAGTGTGCATaGGGCTTGTCTTTGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: VQWTSSRVHVRWGECGGIRRKCA*GLSLST Trigger: CGTGCTCAAAGACAAGCCTCATGCACACTTCCGCCG...AATACCCCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | GTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGGGTATTGGATTTTGTCCTCGGTaGGCACAGTTCGCCCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQWTSSRVHVRWGECGGIGFCPR*AQFARQ Trigger: CTGACGGGCGAACTGTGCGCACCGAGGACAAAATCC...AATACCCCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTGCGCCGGGGGTACAGTaGCTCTGGGGCTCGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTASEGAGPSFSQSRVSFAPGVQ*LWGSPW Trigger: CCAAGGCGAGCCCCAGAGCCACTGTACCCCCGGCGC...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGGGTATTGGATGTTGTCAGGTGTaGCGTCGCCCTCTTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VQWTSSRVHVRWGECGGIGCCQV*RRPLWG Trigger: TCCCCAAAGAGGGCGACGCCACACCTGACAACATCC...AATACCCCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | CCGGGGTGGGGTGGGAAGCGGTGTCCTTTCTATCCTCTTTCTCCAGAAACAGGAGCTGAGTGGGCACCTTaGGGAAGGGAAGTCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGWGGKRCPFYPLSPETGAEWAP*GREVPP Trigger: GGGAGGGACTTCCCTTCCCCAAGGTGCCCACTCAGC...TCCTGTTTCTGGAGAAAGAGGATAGAAAGGACACCGCTTCCCACCCCACCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | CTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGGCTGAGTGGGCACCTTaGGGAAGGGAAGTCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVLTASEGAGPSFSQSRVAEWAP*GREVPP Trigger: GGGAGGGACTTCCCTTCCCCAAGGTGCCCACTCAGC...CACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR TCA 90 bp | TTCACAGGTAACGGGCCTTCCCTTCCTATCTCCTGTCCTTTCTTGTCTCCCGGACAGGGTCAAAGCCACTaGAGGGCCGAGTGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTGNGPSLPISCPFLSPGQGQSH*RAEWSG Trigger: GCCGCTCCACTCGGCCCTTCAGTGGCTTTGACCCTG...TCCGGGAGACAAGAAAGGACAGGAGATAGGAAGGGAAGGCCCGTTACCTGTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | CTCCCATTCCCCCAAAGCAGCCCAGCTCCGAAAGGGGTCGGGAACAGGAACAGTGCCGAGTGGAGCGGCTaGTGGCAAAGAAGATATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPFPQSSPAPKGVGNRNSAEWSG*WQRRYR Trigger: TCGATATCTTCTTTGCCAGCAGCCGCTCCACTCGGC...ACTGTTCCTGTTCCCGACCCCTTTCGGAGCTGGGCTGCTTTGGGGGAATGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | ACAAGTGTGTTAGCTCTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCGGGGGTCCTGTACCTTaGGCCGGGGGTACAGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVLALVLTASEGAGPSFGGPVP*AGGTVA Trigger: AGCCACTGTACCCCCGGCGCAAGGTACAGGACCCCC...GAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAGAGCTAACACACTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR GCA 90 bp | GTCCACGTGAGATGGGGTGAGTGTGGGGGTATTGCTGTGGTAGGCTCCAGACTGGGATTTTGTCCTCGGTaGGCACAGTTCGCCCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHVRWGECGGIAVVGSRLGFCPR*AQFARQ Trigger: CTGACGGGCGAACTGTGCGCACCGAGGACAAAATCC...CAGTCTGGAGCCTACCACAGCAATACCCCCACACTCACCCCATCTCACGTGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | GGAGGGCATGCTATTTACAGGCAGGACAAGGAATCTATAGCTCCGAGTAGCTCTGCGCCGGGGGTACAGTaGCTCTGGGGCTCGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGHAIYRQDKESIAPSSSAPGVQ*LWGSPW Trigger: CCAAGGCGAGCCCCAGAGCCACTGTACCCCCGGCGC...AGAGCTACTCGGAGCTATAGATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR TCA 90 bp | GGCTCAGAGGGAGGAGGGCATGCTATTTACAGGCAGGACAAGGAATCTATAGCTCAGGGTCAAAGCCACTaGAGGGCCGAGTGGAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSEGGGHAIYRQDKESIAQGQSH*RAEWSG Trigger: GCCGCTCCACTCGGCCCTTCAGTGGCTTTGACCCTG...AGCTATAGATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGAACTGTGTTTAATGTCCATCATGGAGCCCAGGTCCCCAGCCAGGACCCGGCGGAAGTGTGCATaGGGCTTGTCTTTGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: EQELCLMSIMEPRSPARTRRKCA*GLSLST Trigger: CGTGCTCAAAGACAAGCCTCATGCACACTTCCGCCG...GGTCCTGGCTGGGGACCTGGGCTCCATGATGGACATTAAACACAGTTCCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAAAGCAGCCCAGCTCCGAAAGGGGTCGGGAACAGGAACAGTCTCCTGAAAGCCGAGTGGAGCGGCTaGTGGCAAAGAAGATATCGA | + |
|
Preference number: 4 (lower is better) Translates to: PQSSPAPKGVGNRNSLLKAEWSG*WQRRYR Trigger: TCGATATCTTCTTTGCCAGCAGCCGCTCCACTCGGC...TTTCAGGAGACTGTTCCTGTTCCCGACCCCTTTCGGAGCTGGGCTGCTTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | CCCCAAAGCAGCCCAGCTCCGAAAGGGGTCGGGAACAGGAACAGTCTCCTGAAATGTAGAGCACGTTGGTaGCATCTCGGCGGAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQSSPAPKGVGNRNSLLKCRARW*HLGGSV Trigger: CACACTTCCGCCGAGATGGCACCAACGTGCTCTACA...TTTCAGGAGACTGTTCCTGTTCCCGACCCCTTTCGGAGCTGGGCTGCTTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | CTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTGGGAATGTTCACGGTaGAGCCACACAGCGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVLTASEGAGPSFSQSRVWECSR*SHTAPP Trigger: AGGAGGCGCTGTGTGGCTGCACCGTGAACATTCCCA...CACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR CCA 90 bp | GTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGGGTATTGAGTGGAGCGGCTGCTaGCAAAGAAGATATCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQWTSSRVHVRWGECGGIEWSGC*QRRYRR Trigger: CCTTCGATATCTTCTTTGCCAGCAGCCGCTCCACTC...AATACCCCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | GTCCACGTGAGATGGGGTGAGTGTGGGGGTATTGCTGTGGTAGGCTCCAGACTGCTCGGCCATCAATGGTaGGAATGTTCACGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHVRWGECGGIAVVGSRLLGHQW*ECSRCS Trigger: GCTGCACCGTGAACATTCCCACCATTGATGGCCGAG...CAGTCTGGAGCCTACCACAGCAATACCCCCACACTCACCCCATCTCACGTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | CCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCGCTGAGTGGGCACCTTaGGGAAGGGAAGTCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PERQRPFWQMLRVHGHLCAEWAP*GREVPP Trigger: GGGAGGGACTTCCCTTCCCCAAGGTGCCCACTCAGC...GCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | GTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGGGTATTATCTCGGCGGAAGTGTaGATGAGGCTTGTCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VQWTSSRVHVRWGECGGIISAEV*MRLVFE Trigger: CTCAAAGACAAGCCTCATGCACACTTCCGCCGAGAT...AATACCCCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGAACTGTGTTTAATGTCCATCATGGAGCCCAGGTCCCCAGCCAGGACCTGTAGAGCACGTTGGTaGCATCTCGGCGGAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EQELCLMSIMEPRSPARTCRARW*HLGGSV Trigger: CACACTTCCGCCGAGATGGCACCAACGTGCTCTACA...GGTCCTGGCTGGGGACCTGGGCTCCATGATGGACATTAAACACAGTTCCTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR CCA 90 bp | CGCCCTCCCATTCCCCCAAAGCAGCCCAGCTCCGAAAGGGGTCGGGAACAGGAATTGTTCTTGTCTGGGTaGTACTTCAAGGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPPIPPKQPSSERGREQELFLSG*YFKAIF Trigger: GAAGATGGCCTTGAAGTACCACCCAGACAAGAACAA...TTCCTGTTCCCGACCCCTTTCGGAGCTGGGCTGCTTTGGGGGAATGGGAGGGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGTTGTTCTTGTCTGGGTaGTACTTCAAGGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASVQWTSSRVHVRWGECGLFLSG*YFKAIF Trigger: GAAGATGGCCTTGAAGTACCACCCAGACAAGAACAA...CCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | CTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGCACTGTAGAGCACGTTaGTGCCATCTCGGCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLTASEGAGPSFSQSRVHCRAR*CHLGGS Trigger: ACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTG...CACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR CCA 90 bp | CTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGCTCGGCCATCAATGGTaGGAATGTTCACGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLTASEGAGPSFSQSRVLGHQW*ECSRCS Trigger: GCTGCACCGTGAACATTCCCACCATTGATGGCCGAG...CACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR CCA 90 bp | CCCCAAAGCAGCCCAGCTCCGAAAGGGGTCGGGAACAGGAACAGTCTCCTGAAATCACTCGGCCATCAATaGTGGGAATGTTCACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PQSSPAPKGVGNRNSLLKSLGHQ*WECSRC Trigger: GCACCGTGAACATTCCCACCATTGATGGCCGAGTGA...TTTCAGGAGACTGTTCCTGTTCCCGACCCCTTTCGGAGCTGGGCTGCTTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR TCA 90 bp | ACAAGTGTGTTAGCTCTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCCGGCGGAAGTGTGCATaGGGCTTGTCTTTGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TSVLALVLTASEGAGPSFRRKCA*GLSLST Trigger: CGTGCTCAAAGACAAGCCTCATGCACACTTCCGCCG...GAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAGAGCTAACACACTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR GCA 90 bp | TTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACAGCCACTGGACCGGTaGTGGGCTCCTTGTTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPGETETILANASCARTQPLDR*WAPCSE Trigger: TTCGGAACAAGGAGCCCAGCACCGGTCCAGTGGCTG...TGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037872.10 |
||
| CDS-3UTR GCA 90 bp | GTCCACGTGAGATGGGGTGAGTGTGGGGGTATTGCTGTGGTAGGCTCCAGACTGATCTCGGCGGAAGTGTaGATGAGGCTTGTCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VHVRWGECGGIAVVGSRLISAEV*MRLVFE Trigger: CTCAAAGACAAGCCTCATGCACACTTCCGCCGAGAT...CAGTCTGGAGCCTACCACAGCAATACCCCCACACTCACCCCATCTCACGTGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | ACAAGTGTGTTAGCTCTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCGAGCAGGGGAGGTGCTaGTTAAGGATCTGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSVLALVLTASEGAGPSFEQGRC*LRICRV Trigger: GACACGGCAGATCCTTAAGCAGCACCTCCCCTGCTC...GAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAGAGCTAACACACTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCCTTGTTCACAGGTAACGGGCCTTCCCTTCCTATCTCCTGTCCTTTCTCCCATCACAGCCACTaGACCGGTGCTGGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTALFTGNGPSLPISCPFSHHSH*TGAGLL Trigger: AAGGAGCCCAGCACCGGTCCAGTGGCTGTGATGGGA...GAAAGGACAGGAGATAGGAAGGGAAGGCCCGTTACCTGTGAACAAGGCTGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037872.10 |
||
| CDS-3UTR CCA 90 bp | CCGGGGTGGGGTGGGAAGCGGTGTCCTTTCTATCCTCTTTCTCCAGAAACAGGAGAGTGGAGCGGCTGCTaGCAAAGAAGATATCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGWGGKRCPFYPLSPETGEWSGC*QRRYRR Trigger: CCTTCGATATCTTCTTTGCCAGCAGCCGCTCCACTC...TCCTGTTTCTGGAGAAAGAGGATAGAAAGGACACCGCTTCCCACCCCACCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | GTCCTTTCTTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGGCTGAGTGGGCACCTTaGGGAAGGGAAGTCCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLSCLPERQRPFWQMLRVAEWAP*GREVPP Trigger: GGGAGGGACTTCCCTTCCCCAAGGTGCCCACTCAGC...CACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAAGAAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTGGATTTTGTCCTCGGTaGGCACAGTTCGCCCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTASEGAGPSFSQSRVSFGFCPR*AQFARQ Trigger: CTGACGGGCGAACTGTGCGCACCGAGGACAAAATCC...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| CDS-3UTR GCA 90 bp | GGCTCAGAGGGAGGAGGGCATGCTATTTACAGGCAGGACAAGGAATCTATAGCTGGATTTTGTCCTCGGTaGGCACAGTTCGCCCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSEGGGHAIYRQDKESIAGFCPR*AQFARQ Trigger: CTGACGGGCGAACTGTGCGCACCGAGGACAAAATCC...AGCTATAGATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | GACAAGGAATCTATAGCTCCGAGTAGCTCTCAAGTCTCTCTCCAGCCACTGCAGTGGGAATGTTCACGGTaGAGCCACACAGCGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DKESIAPSSSQVSLQPLQWECSR*SHTAPP Trigger: AGGAGGCGCTGTGTGGCTGCACCGTGAACATTCCCA...CTGCAGTGGCTGGAGAGAGACTTGAGAGCTACTCGGAGCTATAGATTCCTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTGGATGTTGTCAGGTGTaGCGTCGCCCTCTTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTASEGAGPSFSQSRVSFGCCQV*RRPLWG Trigger: TCCCCAAAGAGGGCGACGCCACACCTGACAACATCC...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| CDS-3UTR CCA 90 bp | CCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCCACTGTAGAGCACGTTaGTGCCATCTCGGCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PERQRPFWQMLRVHGHLCHCRAR*CHLGGS Trigger: ACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTG...GCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTGCCGAGTGGAGCGGCTaGTGGCAAAGAAGATATCGA | + |
|
Preference number: 4 (lower is better) Translates to: LTASEGAGPSFSQSRVSFAEWSG*WQRRYR Trigger: TCGATATCTTCTTTGCCAGCAGCCGCTCCACTCGGC...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| CDS-3UTR GCA 90 bp | GTCCACGTGAGATGGGGTGAGTGTGGGGGTATTGCTGTGGTAGGCTCCAGACTGCGTTTGATGACAATGTaGAGGATTTTGTCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHVRWGECGGIAVVGSRLRLMTM*RILSSV Trigger: CACCGAGGACAAAATCCTGCACATTGTCATCAAACG...CAGTCTGGAGCCTACCACAGCAATACCCCCACACTCACCCCATCTCACGTGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | TTAGCAAGGCTCAGAGGGAGGAGGGCATGCTATTTACAGGCAGGACAAGGAATCTGTAGAGCACGTTGGTaGCATCTCGGCGGAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LARLRGRRACYLQAGQGICRARW*HLGGSV Trigger: CACACTTCCGCCGAGATGGCACCAACGTGCTCTACA...GATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCTGAGCCTTGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | GACAAGGAATCTATAGCTCCGAGTAGCTCTCAAGTCTCTCTCCAGCCACTGCAGTGTAGAGCACGTTGGTaGCATCTCGGCGGAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DKESIAPSSSQVSLQPLQCRARW*HLGGSV Trigger: CACACTTCCGCCGAGATGGCACCAACGTGCTCTACA...CTGCAGTGGCTGGAGAGAGACTTGAGAGCTACTCGGAGCTATAGATTCCTTGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | ACTGCAGTGGGAACTGGATTCAAAGCACGTGACAGAAAATTGACCCCTGGTCTGTGGGAATGTTCACGGTaGAGCCACACAGCGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAVGTGFKARDRKLTPGLWECSR*SHTAPP Trigger: AGGAGGCGCTGTGTGGCTGCACCGTGAACATTCCCA...CAGACCAGGGGTCAATTTTCTGTCACGTGCTTTGAATCCAGTTCCCACTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | AGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCAGTGTGGGAATGTTCACGGTaGAGCCACACAGCGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDRDHFGKCFVCTDTCAVWECSR*SHTAPP Trigger: AGGAGGCGCTGTGTGGCTGCACCGTGAACATTCCCA...CACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | AGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCAGTGGAGCAGGGGAGGTGCTaGTTAAGGATCTGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDRDHFGKCFVCTDTCAVEQGRC*LRICRV Trigger: GACACGGCAGATCCTTAAGCAGCACCTCCCCTGCTC...CACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | ACTGCAGTGGGAACTGGATTCAAAGCACGTGACAGAAAATTGACCCCTGGTCTGGAGCAGGGGAGGTGCTaGTTAAGGATCTGCCGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TAVGTGFKARDRKLTPGLEQGRC*LRICRV Trigger: GACACGGCAGATCCTTAAGCAGCACCTCCCCTGCTC...CAGACCAGGGGTCAATTTTCTGTCACGTGCTTTGAATCCAGTTCCCACTGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGAACTGTGTTTAATGTCCATCATGGAGCCCAGGTCCCCAGCCAGGACCAGATATCGAAGGGGTTaGAGCCACCAAAGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQELCLMSIMEPRSPARTRYRRG*SHQRRK Trigger: CTTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCT...GGTCCTGGCTGGGGACCTGGGCTCCATGATGGACATTAAACACAGTTCCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTCGGCCATCAATGGTaGGAATGTTCACGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPGETETILANASCARTLGHQW*ECSRCS Trigger: GCTGCACCGTGAACATTCCCACCATTGATGGCCGAG...TGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | GACAAGGAATCTATAGCTCCGAGTAGCTCTCAAGTCTCTCTCCAGCCACTGCAGCTCGGCCATCAATGGTaGGAATGTTCACGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DKESIAPSSSQVSLQPLQLGHQW*ECSRCS Trigger: GCTGCACCGTGAACATTCCCACCATTGATGGCCGAG...CTGCAGTGGCTGGAGAGAGACTTGAGAGCTACTCGGAGCTATAGATTCCTTGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR TCA 90 bp | AGTTTTCTCCCAGCTCCTTCACTATTCGACTTCTATACAACTGTGGGAGTGGGGCGGCGGAAGTGTGCATaGGGCTTGTCTTTGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SFLPAPSLFDFYTTVGVGRRKCA*GLSLST Trigger: CGTGCTCAAAGACAAGCCTCATGCACACTTCCGCCG...CCCCACTCCCACAGTTGTATAGAAGTCGAATAGTGAAGGAGCTGGGAGAAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTGAGTGGAGCGGCTGCTaGCAAAGAAGATATCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTASEGAGPSFSQSRVSFEWSGC*QRRYRR Trigger: CCTTCGATATCTTCTTTGCCAGCAGCCGCTCCACTC...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR CCA 90 bp | GACAAGGAATCTATAGCTCCGAGTAGCTCTCAAGTCTCTCTCCAGCCACTGCAGGAAGACAATGTCGGCTaGGATGTTGTCAGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DKESIAPSSSQVSLQPLQEDNVG*DVVRCG Trigger: GCCACACCTGACAACATCCCAGCCGACATTGTCTTC...CTGCAGTGGCTGGAGAGAGACTTGAGAGCTACTCGGAGCTATAGATTCCTTGTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | ACTGCAGTGGGAACTGGATTCAAAGCACGTGACAGAAAATTGACCCCTGGTCTGCACTGTAGAGCACGTTaGTGCCATCTCGGCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TAVGTGFKARDRKLTPGLHCRAR*CHLGGS Trigger: ACTTCCGCCGAGATGGCACCAACGTGCTCTACAGTG...CAGACCAGGGGTCAATTTTCTGTCACGTGCTTTGAATCCAGTTCCCACTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCCTTGTTCACAGGTAACGGGCCTTCCCTTCCTATCTCCTGTCCTTTCTCACTCGGCCATCAATaGTGGGAATGTTCACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTALFTGNGPSLPISCPFSLGHQ*WECSRC Trigger: GCACCGTGAACATTCCCACCATTGATGGCCGAGTGA...GAAAGGACAGGAGATAGGAAGGGAAGGCCCGTTACCTGTGAACAAGGCTGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR TCA 90 bp | GGCTCAGAGGGAGGAGGGCATGCTATTTACAGGCAGGACAAGGAATCTATAGCTCATGAGGCTTGTCTTTaGGCACGAAGACAATGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSEGGGHAIYRQDKESIAHEACL*ARRQCR Trigger: CCGACATTGTCTTCGTGCTCAAAGACAAGCCTCATG...AGCTATAGATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | AGTTTTCTCCCAGCTCCTTCACTATTCGACTTCTATACAACTGTGGGAGTGGGGGCCGAGTGGAGCGGCTaGTGGCAAAGAAGATATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFLPAPSLFDFYTTVGVGAEWSG*WQRRYR Trigger: TCGATATCTTCTTTGCCAGCAGCCGCTCCACTCGGC...CCCCACTCCCACAGTTGTATAGAAGTCGAATAGTGAAGGAGCTGGGAGAAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR GCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTATCTCGGCGGAAGTGTaGATGAGGCTTGTCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTASEGAGPSFSQSRVSFISAEV*MRLVFE Trigger: CTCAAAGACAAGCCTCATGCACACTTCCGCCGAGAT...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| CDS-3UTR CCA 90 bp | GTCCTTTCTTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGGAGTGGAGCGGCTGCTaGCAAAGAAGATATCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLSCLPERQRPFWQMLRVEWSGC*QRRYRR Trigger: CCTTCGATATCTTCTTTGCCAGCAGCCGCTCCACTC...CACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAAGAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCACTTCCCTGCCCCAAATGAAAAGTGTCTCGTGCTCAAAGAACAGCCTGAAGACAATGTCGGCTaGGATGTTGTCAGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAHFPAPNEKCLVLKEQPEDNVG*DVVRCG Trigger: GCCACACCTGACAACATCCCAGCCGACATTGTCTTC...AGGCTGTTCTTTGAGCACGAGACACTTTTCATTTGGGGCAGGGAAGTGAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CCA 90 bp | GGAGGGCATGCTATTTACAGGCAGGACAAGGAATCTATAGCTCCGAGTAGCTCTTCACTCGGCCATCAATaGTGGGAATGTTCACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GGHAIYRQDKESIAPSSSSLGHQ*WECSRC Trigger: GCACCGTGAACATTCCCACCATTGATGGCCGAGTGA...AGAGCTACTCGGAGCTATAGATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | GTCCTTTCTTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGTCACTCGGCCATCAATaGTGGGAATGTTCACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLSCLPERQRPFWQMLRVSLGHQ*WECSRC Trigger: GCACCGTGAACATTCCCACCATTGATGGCCGAGTGA...CACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAAGAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| 3UTR CAA 72 bp | TGTCCTTTCTTGTCTCCCGGAGAGACAGAGACCATTTaGGCAAATGCTTCGTGTGCACGGACACTTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPFLSPGETETI*ANASCARTLVQ Trigger: CTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAAGAAAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | GTCCTTTCTTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGATCTCGGCGGAAGTGTaGATGAGGCTTGTCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLSCLPERQRPFWQMLRVISAEV*MRLVFE Trigger: CTCAAAGACAAGCCTCATGCACACTTCCGCCGAGAT...CACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAAGAAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | ACAAGTGTGTTAGCTCTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCCTCTTTGTTCTTGTCTaGGTGGTACTTCAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSVLALVLTASEGAGPSFLFVLV*VVLQGH Trigger: ATGGCCTTGAAGTACCACCCAGACAAGAACAAAGAG...GAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAGAGCTAACACACTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCTCAAGTCTCTCTCCAGCCACTGCAGTGGGAACTGGATTCAAAGCACGCTCTTTGTTCTTGTCTaGGTGGTACTTCAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VALKSLSSHCSGNWIQSTLFVLV*VVLQGH Trigger: ATGGCCTTGAAGTACCACCCAGACAAGAACAAAGAG...CGTGCTTTGAATCCAGTTCCCACTGCAGTGGCTGGAGAGAGACTTGAGAGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | TTGGCTCACTTCCCTGCCCCAAATGAAAAGTGTCTCGTGCTCAAAGAACAGCCTTCTTCATCCGCTTGGTaGAGCCATGGTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LAHFPAPNEKCLVLKEQPSSSAW*SHGRSP Trigger: AGGAGATCTACCATGGCTCCACCAAGCGGATGAAGA...AGGCTGTTCTTTGAGCACGAGACACTTTTCATTTGGGGCAGGGAAGTGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | AGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCAGTGTCTTCATCCGCTTGGTaGAGCCATGGTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDRDHFGKCFVCTDTCAVSSSAW*SHGRSP Trigger: AGGAGATCTACCATGGCTCCACCAAGCGGATGAAGA...CACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | GTCCTTTCTTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGTCTTCATCCGCTTGGTaGAGCCATGGTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLSCLPERQRPFWQMLRVSSSAW*SHGRSP Trigger: AGGAGATCTACCATGGCTCCACCAAGCGGATGAAGA...CACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAAGAAAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | AGTTTTCTCCCAGCTCCTTCACTATTCGACTTCTATACAACTGTGGGAGTGGGGGAAGACAATGTCGGCTaGGATGTTGTCAGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLPAPSLFDFYTTVGVGEDNVG*DVVRCG Trigger: GCCACACCTGACAACATCCCAGCCGACATTGTCTTC...CCCCACTCCCACAGTTGTATAGAAGTCGAATAGTGAAGGAGCTGGGAGAAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | TTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCACAATCGAGGGTGTCTTTTTTGTTCTTGTCTGGGTaGTACTTCAAGGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTASEGAGPSFSQSRVSFLFLSG*YFKAIF Trigger: GAAGATGGCCTTGAAGTACCACCCAGACAAGAACAA...AAAAGACACCCTCGATTGTGAGAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| CDS-3UTR CCA 90 bp | AGAACAGCCTTGTTCACAGGTAACGGGCCTTCCCTTCCTATCTCCTGTCCTTTCTTGTTCTTGTCTGGGTaGTACTTCAAGGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTALFTGNGPSLPISCPFLFLSG*YFKAIF Trigger: GAAGATGGCCTTGAAGTACCACCCAGACAAGAACAA...GAAAGGACAGGAGATAGGAAGGGAAGGCCCGTTACCTGTGAACAAGGCTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | GACAAGGAATCTATAGCTCCGAGTAGCTCTCAAGTCTCTCTCCAGCCACTGCAGCTCTTTGTTCTTGTCTaGGTGGTACTTCAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DKESIAPSSSQVSLQPLQLFVLV*VVLQGH Trigger: ATGGCCTTGAAGTACCACCCAGACAAGAACAAAGAG...CTGCAGTGGCTGGAGAGAGACTTGAGAGCTACTCGGAGCTATAGATTCCTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | TTAGCAAGGCTCAGAGGGAGGAGGGCATGCTATTTACAGGCAGGACAAGGAATCCTCTTTGTTCTTGTCTaGGTGGTACTTCAAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LARLRGRRACYLQAGQGILFVLV*VVLQGH Trigger: ATGGCCTTGAAGTACCACCCAGACAAGAACAAAGAG...GATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCTGAGCCTTGCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | AGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCAGTGAGATATCGAAGGGGTTaGAGCCACCAAAGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDRDHFGKCFVCTDTCAVRYRRG*SHQRRK Trigger: CTTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCT...CACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | GGAGGGCATGCTATTTACAGGCAGGACAAGGAATCTATAGCTCCGAGTAGCTCTAGATATCGAAGGGGTTaGAGCCACCAAAGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGHAIYRQDKESIAPSSSRYRRG*SHQRRK Trigger: CTTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCT...AGAGCTACTCGGAGCTATAGATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | ACTGCAGTGGGAACTGGATTCAAAGCACGTGACAGAAAATTGACCCCTGGTCTGAGATATCGAAGGGGTTaGAGCCACCAAAGAAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TAVGTGFKARDRKLTPGLRYRRG*SHQRRK Trigger: CTTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCT...CAGACCAGGGGTCAATTTTCTGTCACGTGCTTTGAATCCAGTTCCCACTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CCA 90 bp | AGTTTTCTCCCAGCTCCTTCACTATTCGACTTCTATACAACTGTGGGAGTGGGGTCTTCATCCGCTTGGTaGAGCCATGGTAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLPAPSLFDFYTTVGVGSSSAW*SHGRSP Trigger: AGGAGATCTACCATGGCTCCACCAAGCGGATGAAGA...CCCCACTCCCACAGTTGTATAGAAGTCGAATAGTGAAGGAGCTGGGAGAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | GGAGGGCATGCTATTTACAGGCAGGACAAGGAATCTATAGCTCCGAGTAGCTCTCGTTTGATGACAATGTaGAGGATTTTGTCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGHAIYRQDKESIAPSSSRLMTM*RILSSV Trigger: CACCGAGGACAAAATCCTGCACATTGTCATCAAACG...AGAGCTACTCGGAGCTATAGATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR GCA 90 bp | AGTTTTCTCCCAGCTCCTTCACTATTCGACTTCTATACAACTGTGGGAGTGGGGCGTTTGATGACAATGTaGAGGATTTTGTCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLPAPSLFDFYTTVGVGRLMTM*RILSSV Trigger: CACCGAGGACAAAATCCTGCACATTGTCATCAAACG...CCCCACTCCCACAGTTGTATAGAAGTCGAATAGTGAAGGAGCTGGGAGAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | GCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGATGTCGGCTGGGATGTaGTCAGGTGTGGCGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASVQWTSSRVHVRWGECGMSAGM*SGVASP Trigger: GGGCGACGCCACACCTGACAACATCCCAGCCGACAT...CCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS TCA 90 bp | AGGGTCCCCATGAAAGGTGTAGTGAAAGGAGCCACCGGAACCACCTaGGGAACCACCGCCGGTCTTGAGGCCTTCCTCACCATACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RVPMKGVVKGATGTT*GTTAGLEAFLTILV Trigger: GACCAGTATGGTGAGGAAGGCCTCAAGACCGGCGGTGGTTCCTCAGGTGGTTCCGGTGGCTCCTTTCACTACACCTTTCATGGGGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | GCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGACAATGTGCAGGATTTaGTCCTCGGTGCGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASVQWTSSRVHVRWGECGTMCRI*SSVRTV Trigger: AACTGTGCGCACCGAGGACAAAATCCTGCACATTGT...CCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | TTCACAGGTAACGGGCCTTCCCTTCCTATCTCCTGTCCTTTCTTGTCTCCCGGAATGTCGGCTGGGATGTaGTCAGGTGTGGCGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FTGNGPSLPISCPFLSPGMSAGM*SGVASP Trigger: GGGCGACGCCACACCTGACAACATCCCAGCCGACAT...TCCGGGAGACAAGAAAGGACAGGAGATAGGAAGGGAAGGCCCGTTACCTGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | TTAGCAAGGCTCAGAGGGAGGAGGGCATGCTATTTACAGGCAGGACAAGGAATCATGTCGGCTGGGATGTaGTCAGGTGTGGCGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LARLRGRRACYLQAGQGIMSAGM*SGVASP Trigger: GGGCGACGCCACACCTGACAACATCCCAGCCGACAT...GATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCTGAGCCTTGCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | GTCCTTTCTTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGATGTCGGCTGGGATGTaGTCAGGTGTGGCGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSCLPERQRPFWQMLRVMSAGM*SGVASP Trigger: GGGCGACGCCACACCTGACAACATCCCAGCCGACAT...CACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAAGAAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | GCCAGTGTCCAGTGGACATCCAGCCGGGTCCACGTGAGATGGGGTGAGTGTGGGTCTGGGAATCGAACTTaGAACTCAACAATGAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASVQWTSSRVHVRWGECGSGNRT*NSTMRS Trigger: AGACCTCATTGTTGAGTTCAAAGTTCGATTCCCAGA...CCCACACTCACCCCATCTCACGTGGACCCGGCTGGATGTCCACTGGACACTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | CCCCAAAGCAGCCCAGCTCCGAAAGGGGTCGGGAACAGGAACAGTCTCCTGAAAAAGATATCGAAGGGGTaGGAGCCACCAAAGAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PQSSPAPKGVGNRNSLLKKISKG*EPPKKE Trigger: TTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCTT...TTTCAGGAGACTGTTCCTGTTCCCGACCCCTTTCGGAGCTGGGCTGCTTTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CAA 90 bp | CTTCCCTTCCTATCTCCTGTCCTTTCTTGTCTCCCGGAGAGACAGAGACCATTTCCCCTACTCAGCCCATaGAAGCCAAAGCGGCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPFLSPVLSCLPERQRPFPLLSP*KPKRPK Trigger: CTTTGGCCGCTTTGGCTTCAATGGGCTGAGTAGGGG...AAATGGTCTCTGTCTCTCCGGGAGACAAGAAAGGACAGGAGATAGGAAGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CAA 90 bp | AGAACAGCCTTGTTCACAGGTAACGGGCCTTCCCTTCCTATCTCCTGTCCTTTCGTGGCGTCGCCCTCTTaGGGGAAGGTAATCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RTALFTGNGPSLPISCPFVASPS*GKVILV Trigger: TACCAAGATTACCTTCCCCAAAGAGGGCGACGCCAC...GAAAGGACAGGAGATAGGAAGGGAAGGCCCGTTACCTGTGAACAAGGCTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CAA 90 bp | GTAGCTCTCAAGTCTCTCTCCAGCCACTGCAGTGGGAACTGGATTCAAAGCACGACAATGTGCAGGATTTaGTCCTCGGTGCGCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VALKSLSSHCSGNWIQSTTMCRI*SSVRTV Trigger: AACTGTGCGCACCGAGGACAAAATCCTGCACATTGT...CGTGCTTTGAATCCAGTTCCCACTGCAGTGGCTGGAGAGAGACTTGAGAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CAA 90 bp | AGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCAGTGGTGGCGTCGCCCTCTTaGGGGAAGGTAATCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RDRDHFGKCFVCTDTCAVVASPS*GKVILV Trigger: TACCAAGATTACCTTCCCCAAAGAGGGCGACGCCAC...CACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CAA 90 bp | ACTGCAGTGGGAACTGGATTCAAAGCACGTGACAGAAAATTGACCCCTGGTCTGGTGGCGTCGCCCTCTTaGGGGAAGGTAATCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TAVGTGFKARDRKLTPGLVASPS*GKVILV Trigger: TACCAAGATTACCTTCCCCAAAGAGGGCGACGCCAC...CAGACCAGGGGTCAATTTTCTGTCACGTGCTTTGAATCCAGTTCCCACTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
||
| CDS-3UTR CAA 90 bp | GAGCAGGAACTGTGTTTAATGTCCATCATGGAGCCCAGGTCCCCAGCCAGGACCGGCTTGATAACATCATaGCAGGGTAAAGGGATCACT | + |
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Preference number: 5 (lower is better) Translates to: EQELCLMSIMEPRSPARTGLITS*QGKGIT Trigger: AGTGATCCCTTTACCCTGCAATGATGTTATCAAGCC...GGTCCTGGCTGGGGACCTGGGCTCCATGATGGACATTAAACACAGTTCCTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| CDS-3UTR CAA 90 bp | CGGGGTGGGGTGGGAAGCGGTGTCCTTTCTATCCTCTTTCTCCAGAAACAGGAGGGCTTGATAACATCATaGCAGGGTAAAGGGATCACT | + |
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Preference number: 5 (lower is better) Translates to: RGGVGSGVLSILFLQKQEGLITS*QGKGIT Trigger: AGTGATCCCTTTACCCTGCAATGATGTTATCAAGCC...CTCCTGTTTCTGGAGAAAGAGGATAGAAAGGACACCGCTTCCCACCCCACCCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | CCCCAAAGCAGCCCAGCTCCGAAAGGGGTCGGGAACAGGAACAGTCTCCTGAAATCTGGGAATCGAACTTaGAACTCAACAATGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: PQSSPAPKGVGNRNSLLKSGNRT*NSTMRS Trigger: AGACCTCATTGTTGAGTTCAAAGTTCGATTCCCAGA...TTTCAGGAGACTGTTCCTGTTCCCGACCCCTTTCGGAGCTGGGCTGCTTTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | GAGCAGGAACTGTGTTTAATGTCCATCATGGAGCCCAGGTCCCCAGCCAGGACCTCTGGGAATCGAACTTaGAACTCAACAATGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: EQELCLMSIMEPRSPARTSGNRT*NSTMRS Trigger: AGACCTCATTGTTGAGTTCAAAGTTCGATTCCCAGA...GGTCCTGGCTGGGGACCTGGGCTCCATGATGGACATTAAACACAGTTCCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| CDS-3UTR CAA 90 bp | GGCTCAGAGGGAGGAGGGCATGCTATTTACAGGCAGGACAAGGAATCTATAGCTAAGATATCGAAGGGGTaGGAGCCACCAAAGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GSEGGGHAIYRQDKESIAKISKG*EPPKKE Trigger: TTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCTT...AGCTATAGATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | TTGTCTCCCGGAGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACAAAGATATCGAAGGGGTaGGAGCCACCAAAGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LSPGETETILANASCARTKISKG*EPPKKE Trigger: TTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCTT...TGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCTCCGGGAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | TTAGCAAGGCTCAGAGGGAGGAGGGCATGCTATTTACAGGCAGGACAAGGAATCAAGATATCGAAGGGGTaGGAGCCACCAAAGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LARLRGRRACYLQAGQGIKISKG*EPPKKE Trigger: TTCCTTCTTTGGTGGCTCCAACCCCTTCGATATCTT...GATTCCTTGTCCTGCCTGTAAATAGCATGCCCTCCTCCCTCTGAGCCTTGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | TTGGCTCACTTCCCTGCCCCAAATGAAAAGTGTCTCGTGCTCAAAGAACAGCCTACAATGTGCAGGATTTaGTCCTCGGTGCGCACAGTT | + |
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Preference number: 5 (lower is better) Translates to: LAHFPAPNEKCLVLKEQPTMCRI*SSVRTV Trigger: AACTGTGCGCACCGAGGACAAAATCCTGCACATTGT...AGGCTGTTCTTTGAGCACGAGACACTTTTCATTTGGGGCAGGGAAGTGAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | ACAAGTGTGTTAGCTCTCGTGTTGACAGCTTCTGAAGGGGCTGGGCCCTCTTTCTCTGGGAATCGAACTTaGAACTCAACAATGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: TSVLALVLTASEGAGPSFSGNRT*NSTMRS Trigger: AGACCTCATTGTTGAGTTCAAAGTTCGATTCCCAGA...GAAAGAGGGCCCAGCCCCTTCAGAAGCTGTCAACACGAGAGCTAACACACTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 |
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| CDS CCA 90 bp | CGGGATCCCAAGAATCTTGTAATAATCTTTTCCCATCACAGCCACTaGACCGGTGCTGGGCTCCTTGTTCCGAAACTTTACAAACCCATT | + |
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Preference number: 5 (lower is better) Translates to: RDPKNLVIIFSHHSH*TGAGLLVPKLYKPI Trigger: AATGGGTTTGTAAAGTTTCGGAACAAGGAGCCCAGCACCGGTCCAGTGGCTGTGATGGGAAAAGATTATTACAAGATTCTTGGGATCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037872.10 |
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| CDS-3UTR CAA 90 bp | AGAGACAGAGACCATTTTGGCAAATGCTTCGTGTGCACGGACACTTGTGCAGTGGGCTTGATAACATCATaGCAGGGTAAAGGGATCACT | + |
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Preference number: 5 (lower is better) Translates to: RDRDHFGKCFVCTDTCAVGLITS*QGKGIT Trigger: AGTGATCCCTTTACCCTGCAATGATGTTATCAAGCC...CACTGCACAAGTGTCCGTGCACACGAAGCATTTGCCAAAATGGTCTCTGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS-3UTR CAA 90 bp | ACTGCAGTGGGAACTGGATTCAAAGCACGTGACAGAAAATTGACCCCTGGTCTGGGCTTGATAACATCATaGCAGGGTAAAGGGATCACT | + |
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Preference number: 5 (lower is better) Translates to: TAVGTGFKARDRKLTPGLGLITS*QGKGIT Trigger: AGTGATCCCTTTACCCTGCAATGATGTTATCAAGCC...CAGACCAGGGGTCAATTTTCTGTCACGTGCTTTGAATCCAGTTCCCACTGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS CCA 72 bp | GAACCACCGCCGGTCTTGAGGCCTTCCTCACCATACTaGTCGTACAGGCTCCGCTTCTTAGGGTCACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: EPPPVLRPSSPY*SYRLRFLGSLS Trigger: GCTGAGTGACCCTAAGAAGCGGAGCCTGTACGACCAGTATGGTGAGGAAGGCCTCAAGACCGGCGGTGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS TCA 72 bp | ATGAAAGGTGTAGTGAAAGGAGCCACCGGAACCACCTaGGGAACCACCGCCGGTCTTGAGGCCTTCCTCACC | + |
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Preference number: 6 (lower is better) Translates to: MKGVVKGATGTT*GTTAGLEAFLT Trigger: GGTGAGGAAGGCCTCAAGACCGGCGGTGGTTCCTCAGGTGGTTCCGGTGGCTCCTTTCACTACACCTTTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS TCA 72 bp | CTTCATCCACATCCATGTCATCAGGGTCAAAGCCACTaGAGGGCCGAGTGGAGCGGCTGCTGGCAAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LHPHPCHQGQSH*RAEWSGCWQRR Trigger: TCTTCTTTGCCAGCAGCCGCTCCACTCGGCCCTTCAGTGGCTTTGACCCTGATGACATGGATGTGGATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS GCA 72 bp | ACTGTAGAGCACGTTGGTGCCATCTCGGCGGAAGTGTaGATGAGGCTTGTCTTTGAGCACGAAGACAATGTC | + |
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Preference number: 6 (lower is better) Translates to: TVEHVGAISAEV*MRLVFEHEDNV Trigger: GACATTGTCTTCGTGCTCAAAGACAAGCCTCATGCACACTTCCGCCGAGATGGCACCAACGTGCTCTACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037872.10 ENSMUST00000084662.12 ENSMUST00000098112.9 ENSMUST00000107973.3 |
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| CDS GCA 72 bp | TGTAATAATCTTTTCCCATCACAGCCACTGGACCGGTaGTGGGCTCCTTGTTCCGAAACTTTACAAACCCAT | + |
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Preference number: 6 (lower is better) Translates to: CNNLFPSQPLDR*WAPCSETLQTH Trigger: ATGGGTTTGTAAAGTTTCGGAACAAGGAGCCCAGCACCGGTCCAGTGGCTGTGATGGGAAAAGATTATTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037872.10 |
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| CDS CCA 72 bp | AATAATCTTTTCCCATCACAGCCACTGGACCGGTGCTaGGCTCCTTGTTCCGAAACTTTACAAACCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: NNLFPSQPLDRC*APCSETLQTHS Trigger: TGAATGGGTTTGTAAAGTTTCGGAACAAGGAGCCCAGCACCGGTCCAGTGGCTGTGATGGGAAAAGATTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037872.10 |
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| CDS CCA 72 bp | AAGAATCTTGTAATAATCTTTTCCCATCACAGCCACTaGACCGGTGCTGGGCTCCTTGTTCCGAAACTTTAC | + |
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Preference number: 6 (lower is better) Translates to: KNLVIIFSHHSH*TGAGLLVPKLY Trigger: GTAAAGTTTCGGAACAAGGAGCCCAGCACCGGTCCAGTGGCTGTGATGGGAAAAGATTATTACAAGATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037872.10 |
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