Pregenerated sensors for DNAJB4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028035Ensembl transcript IDs: ENSMUST00000029669.4, ENSMUST00000050073.13, ENSMUST00000144950.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACACACGCGCGCGTACACACACACACACACACACACACGCACATaGACACAGTACTTGGATAATCTAGTATTTACTAGAAGTATATCC | + |
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Preference number: 1 (lower is better) Translates to: THTRAYTHTHTHTRT*TQYLDNLVFTRSIS Trigger: GGATATACTTCTAGTAAATACTAGATTATCCAAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR TCA 90 bp | GCACACACATCAATGCATTCTGGTACCAGCCCAACACAGCATCTCTaGATGTCACCTAGACTGCATTTCTGTATGACTTTGGCTTTTATT | + |
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Preference number: 1 (lower is better) Translates to: AHTSMHSGTSPTQHL*MSPRLHFCMTLAFI Trigger: AATAAAAGCCAAAGTCATACAGAAATGCAGTCTAGGTGACATTCAGAGATGCTGTGTTGGGCTGGTACCAGAATGCATTGATGTGTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR GCA 90 bp | CCTACTGTAAAAACCCACGTTGCCTATTTGAACTGTGTCTATTCATaGAGTTTAATGAGCCCTCAGAAGAGTTTACACATCTTTACACAG | + |
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Preference number: 1 (lower is better) Translates to: PTVKTHVAYLNCVYS*SLMSPQKSLHIFTQ Trigger: CTGTGTAAAGATGTGTAAACTCTTCTGAGGGCTCATTAAACTGCATGAATAGACACAGTTCAAATAGGCAACGTGGGTTTTTACAGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR TCA 90 bp | AACGGTAAAGCACACACATCAATGCATTCTGGTACCAGCCCAACACAGCATCTCAGGAGCCTATCACACTaGTCATTTAAAGATACACAC | + |
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Preference number: 2 (lower is better) Translates to: NGKAHTSMHSGTSPTQHLRSLSH*SFKDTH Trigger: GTGTGTATCTTTAAATGATCAGTGTGATAGGCTCCT...GAGATGCTGTGTTGGGCTGGTACCAGAATGCATTGATGTGTGTGCTTTACCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR GCA 90 bp | AACGGTAAAGCACACACATCAATGCATTCTGGTACCAGCCCAACACAGCATCTCAACTGTGTCTATTCATaGAGTTTAATGAGCCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: NGKAHTSMHSGTSPTQHLNCVYS*SLMSPQ Trigger: CTGAGGGCTCATTAAACTGCATGAATAGACACAGTT...GAGATGCTGTGTTGGGCTGGTACCAGAATGCATTGATGTGTGTGCTTTACCGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR GCA 90 bp | AACGGTAAAGCACACACATCAATGCATTCTGGTACCAGCCCAACACAGCATCTCTTCACAGCAGTCAACTaGCGGTACTTTTATATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: NGKAHTSMHSGTSPTQHLFTAVN*RYFYIF Trigger: GAAAATATAAAAGTACCGGCAGTTGACTGCTGTGAA...GAGATGCTGTGTTGGGCTGGTACCAGAATGCATTGATGTGTGTGCTTTACCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR GCA 90 bp | AACGGTAAAGCACACACATCAATGCATTCTGGTACCAGCCCAACACAGCATCTCTGTAAAAACCCACGTTaGCTATTTGAACTGTGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: NGKAHTSMHSGTSPTQHLCKNPR*LFELCL Trigger: TAGACACAGTTCAAATAGGCAACGTGGGTTTTTACA...GAGATGCTGTGTTGGGCTGGTACCAGAATGCATTGATGTGTGTGCTTTACCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR CAA 90 bp | GCGTACACACACACACACACACACACACGCACATGCACACAGTACTaGGATAATCTAGTATTTACTAGAAGTATATCCATAGACCACAAA | + |
|
Preference number: 2 (lower is better) Translates to: AYTHTHTHTRTCTQY*DNLVFTRSISIDHK Trigger: TTTGTGGTCTATGGATATACTTCTAGTAAATACTAGATTATCCAAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR CAA 90 bp | ACAGCACATTACCCACAAGCAGTGATGGTGTTTGTTATATCCAGATaGCGGTTTAACACCACAGTGATAGATGACTGTTCTTTAGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TAHYPQAVMVFVISR*RFNTTVIDDCSLGK Trigger: TTTCCCTAAAGAACAGTCATCTATCACTGTGGTGTTAAACCGCAATCTGGATATAACAAACACCATCACTGCTTGTGGGTAATGTGCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGGTGCATAGCATGAGGCCCACGTTGCCTATTTaGACTGTGTCTATTCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: TVIDDCSLGKLCKVHSMRPTLPI*TVSIHA Trigger: TGCATGAATAGACACAGTTCAAATAGGCAACGTGGG...CCTCATGCTATGCACCTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGGTGCATAGCATGAGGAAGCACACACATCAATaGATTCTGGTACCAGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TVIDDCSLGKLCKVHSMRKHTHQ*ILVPAQ Trigger: TTGGGCTGGTACCAGAATGCATTGATGTGTGTGCTT...CCTCATGCTATGCACCTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACACCCACGTTGCCTATTTaGACTGTGTCTATTCATGCA | + |
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Preference number: 2 (lower is better) Translates to: RRENVIHFLLMMRSALRTPTLPI*TVSIHA Trigger: TGCATGAATAGACACAGTTCAAATAGGCAACGTGGG...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGGTGCATAGCATGAGGGACTGCATTTCTGTATaGCTTTGGCTTTTATTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TVIDDCSLGKLCKVHSMRDCISV*LWLLFS Trigger: GGAGAATAAAAGCCAAAGTCATACAGAAATGCAGTC...CCTCATGCTATGCACCTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCGGTTTAACACCACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGAACGCTGCAGAATATTaGGAAGTCACAACGGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: LRFNTTVIDDCSLGKLCKNAAEY*EVTTVK Trigger: CTTTACCGTTGTGACTTCTCAATATTCTGCAGCGTT...CTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGTGGTGTTAAACCGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGGTGCATAGCATGAGGAACTGTGTCTATTCATaGAGTTTAATGAGCCCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TVIDDCSLGKLCKVHSMRNCVYS*SLMSPQ Trigger: CTGAGGGCTCATTAAACTGCATGAATAGACACAGTT...CCTCATGCTATGCACCTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCGGTTTAACACCACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGACACACACACGCACATaGACACAGTACTTGGATAAT | + |
|
Preference number: 2 (lower is better) Translates to: LRFNTTVIDDCSLGKLCKTHTRT*TQYLDN Trigger: ATTATCCAAGTACTGTGTGCATGTGCGTGTGTGTGT...CTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGTGGTGTTAAACCGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACAAACGCTGCAGAATATTaGGAAGTCACAACGGTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RRENVIHFLLMMRSALRTNAAEY*EVTTVK Trigger: CTTTACCGTTGTGACTTCTCAATATTCTGCAGCGTT...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACAACACACACACGCACATaGACACAGTACTTGGATAAT | + |
|
Preference number: 2 (lower is better) Translates to: RRENVIHFLLMMRSALRTTHTRT*TQYLDN Trigger: ATTATCCAAGTACTGTGTGCATGTGCGTGTGTGTGT...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACAAGGAGCCTATCACACTaGTCATTTAAAGATACACAC | + |
|
Preference number: 2 (lower is better) Translates to: RRENVIHFLLMMRSALRTRSLSH*SFKDTH Trigger: GTGTGTATCTTTAAATGATCAGTGTGATAGGCTCCT...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGGTGCATAGCATGAGGTGTCTTATCAAACTATaGATAGCAAGGTTCTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TVIDDCSLGKLCKVHSMRCLIKL*IARFFS Trigger: TGAGAAGAACCTTGCTATCCATAGTTTGATAAGACA...CCTCATGCTATGCACCTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACATTCACAGCAGTCAACTaGCGGTACTTTTATATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: RRENVIHFLLMMRSALRTFTAVN*RYFYIF Trigger: GAAAATATAAAAGTACCGGCAGTTGACTGCTGTGAA...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACATGTCTTATCAAACTATaGATAGCAAGGTTCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: RRENVIHFLLMMRSALRTCLIKL*IARFFS Trigger: TGAGAAGAACCTTGCTATCCATAGTTTGATAAGACA...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR TCA 72 bp | AGCATCTCTGAATGTCACCTAGACTGCATTTCTGTATaGCTTTGGCTTTTATTCTCCACATATTACATATAC | + |
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Preference number: 3 (lower is better) Translates to: SISECHLDCISV*LWLLFSTYYIY Trigger: GTATATGTAATATGTGGAGAATAAAAGCCAAAGTCATACAGAAATGCAGTCTAGGTGACATTCAGAGATGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR TCA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTCGTGGAAAGTGTACCTaGAGGTACCTCCTTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: HARVHTHTHTHTHMHTVLRGKCT*RYLLVH Trigger: ATGGACAAGGAGGTACCTTCAGGTACACTTTCCACG...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR TCA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTCTTCCCTCGGAAAAGTaGTTTTGGTGCCTTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: HARVHTHTHTHTHMHTVLLPSEK*FWCLLS Trigger: GGAAAGAAGGCACCAAAATCACTTTTCCGAGGGAAG...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR CCA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTAGATTTCAAAAGGGTTaGAACCTCCGAAAAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HARVHTHTHTHTHMHTVLRFQKG*NLRKRL Trigger: CAGCCTTTTTCGGAGGTTCCAACCCTTTTGAAATCT...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR TCA 90 bp | AACGGTAAAGCACACACATCAATGCATTCTGGTACCAGCCCAACACAGCATCTCTGTCCGGGTGAAATTTaGGGGCTTGCTTTCGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: NGKAHTSMHSGTSPTQHLCPGEI*GLAFGK Trigger: CTTACCGAAAGCAAGCCCTCAAATTTCACCCGGACA...GAGATGCTGTGTTGGGCTGGTACCAGAATGCATTGATGTGTGTGCTTTACCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR TCA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTAATTTTTCCTCTGCTTaGGGAGATTTGTTCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HARVHTHTHTHTHMHTVLNFSSA*GDLFLS Trigger: GGACAAGAACAAATCTCCTCAAGCAGAGGAAAAATT...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR TCA 90 bp | AACGGTAAAGCACACACATCAATGCATTCTGGTACCAGCCCAACACAGCATCTCTGGATGCTGCAGATATaGCGTCTGGGAAGGACACAT | + |
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Preference number: 4 (lower is better) Translates to: NGKAHTSMHSGTSPTQHLWMLQI*RLGRTH Trigger: ATGTGTCCTTCCCAGACGTCATATCTGCAGCATCCA...GAGATGCTGTGTTGGGCTGGTACCAGAATGCATTGATGTGTGTGCTTTACCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR CCA 90 bp | AACGGTAAAGCACACACATCAATGCATTCTGGTACCAGCCCAACACAGCATCTCAAAAGGCTGCAAATGTaGCATGAGGATCTCCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: NGKAHTSMHSGTSPTQHLKRLQM*HEDLRG Trigger: TCCACGGAGATCCTCATGCCACATTTGCAGCCTTTT...GAGATGCTGTGTTGGGCTGGTACCAGAATGCATTGATGTGTGTGCTTTACCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR CCA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTAGAATTCCTGTCTCTTaGATATCCATTCATGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: HARVHTHTHTHTHMHTVLRIPVS*ISIHAE Trigger: TTCAGCATGAATGGATATCCAAGAGACAGGAATTCT...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR GCA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTTACTTCATACGCTTCTaGGACCTCTTTAAATTTTTC | + |
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Preference number: 4 (lower is better) Translates to: HARVHTHTHTHTHMHTVLYFIRF*DLFKFF Trigger: GAAAAATTTAAAGAGGTCGCAGAAGCGTATGAAGTA...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR GCA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTAACAAAAACAATGTCTaGTGGGATACTATTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HARVHTHTHTHTHMHTVLNKNNV*WDTIWC Trigger: ACACCAAATAGTATCCCAGCAGACATTGTTTTTGTT...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR CCA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTAAATCTTCATCCGTTTaGTGCAGCCACTATATATTT | + |
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Preference number: 4 (lower is better) Translates to: HARVHTHTHTHTHMHTVLKSSSV*CSHYIF Trigger: AAATATATAGTGGCTGCACCAAACGGATGAAGATTT...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR TCA 90 bp | CTTTACACAGAATTCACAGCAGTCAACTGCCGGTACTTTTATATTTTCAGTGTCTGTCCGGGTGAAATTTaGGGGCTTGCTTTCGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: LYTEFTAVNCRYFYIFSVCPGEI*GLAFGK Trigger: CTTACCGAAAGCAAGCCCTCAAATTTCACCCGGACA...GACACTGAAAATATAAAAGTACCGGCAGTTGACTGCTGTGAATTCTGTGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR TCA 90 bp | CTTTACACAGAATTCACAGCAGTCAACTGCCGGTACTTTTATATTTTCAGTGTCTGTTGGCACATTAAGTaGGCAGCCACACAATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LYTEFTAVNCRYFYIFSVCWHIK*AATQCL Trigger: GAGGCATTGTGTGGCTGCTCACTTAATGTGCCAACA...GACACTGAAAATATAAAAGTACCGGCAGTTGACTGCTGTGAATTCTGTGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR CCA 90 bp | ACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGGTGCATAGCATGAGGAAAAGGCTGCAAATGTaGCATGAGGATCTCCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TVIDDCSLGKLCKVHSMRKRLQM*HEDLRG Trigger: TCCACGGAGATCCTCATGCCACATTTGCAGCCTTTT...CCTCATGCTATGCACCTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR TCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACATGTTGGCACATTAAGTaGGCAGCCACACAATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RRENVIHFLLMMRSALRTCWHIK*AATQCL Trigger: GAGGCATTGTGTGGCTGCTCACTTAATGTGCCAACA...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR TCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACATGGATGCTGCAGATATaGCGTCTGGGAAGGACACAT | + |
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Preference number: 4 (lower is better) Translates to: RRENVIHFLLMMRSALRTWMLQI*RLGRTH Trigger: ATGTGTCCTTCCCAGACGTCATATCTGCAGCATCCA...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR CCA 90 bp | CTTTACACAGAATTCACAGCAGTCAACTGCCGGTACTTTTATATTTTCAGTGTCTGCTGGGATACTATTTaGTGTTTCATCGCCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LYTEFTAVNCRYFYIFSVCWDTI*CFIAFP Trigger: AGGGAAGGCGATGAAACACCAAATAGTATCCCAGCA...GACACTGAAAATATAAAAGTACCGGCAGTTGACTGCTGTGAATTCTGTGTAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR TCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACACTTCCCTCGGAAAAGTaGTTTTGGTGCCTTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RRENVIHFLLMMRSALRTLPSEK*FWCLLS Trigger: GGAAAGAAGGCACCAAAATCACTTTTCCGAGGGAAG...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR GCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACAACCTCCGAAAAAGGCTaGAAATGTGGCATGAGGATC | + |
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Preference number: 4 (lower is better) Translates to: RRENVIHFLLMMRSALRTTSEKG*KCGMRI Trigger: GATCCTCATGCCACATTTGCAGCCTTTTTCGGAGGT...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| CDS-3UTR CCA 90 bp | TTGCGGTTTAACACCACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGTGCTGGGATACTATTTaGTGTTTCATCGCCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LRFNTTVIDDCSLGKLCKCWDTI*CFIAFP Trigger: AGGGAAGGCGATGAAACACCAAATAGTATCCCAGCA...CTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGTGGTGTTAAACCGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
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| 3UTR CAA 72 bp | CTTTTCATCCCTACTGTAAAAACCCACGTTGCCTATTaGAACTGTGTCTATTCATGCAGTTTAATGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFIPTVKTHVAY*NCVYSCSLMSP Trigger: AGGGCTCATTAAACTGCATGAATAGACACAGTTCAAATAGGCAACGTGGGTTTTTACAGTAGGGATGAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| 3UTR CAA 72 bp | CATTACAACCATGCTCTTAAGAAACGCTGCAGAATATaGAGAAGTCACAACGGTAAAGCACACACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: HYNHALKKRCRI*RSHNGKAHTSM Trigger: CATTGATGTGTGTGCTTTACCGTTGTGACTTCTCAATATTCTGCAGCGTTTCTTAAGAGCATGGTTGTAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR TCA 90 bp | CTTTACACAGAATTCACAGCAGTCAACTGCCGGTACTTTTATATTTTCAGTGTCGATACTTTAAGTTCATaGATAATGGGAGGGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LYTEFTAVNCRYFYIFSVDTLSS*IMGGSC Trigger: ACAAGACCCTCCCATTATTCATGAACTTAAAGTATC...GACACTGAAAATATAAAAGTACCGGCAGTTGACTGCTGTGAATTCTGTGTAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CCA 90 bp | CTTTACACAGAATTCACAGCAGTCAACTGCCGGTACTTTTATATTTTCAGTGTCAGAATTCCTGTCTCTTaGATATCCATTCATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYTEFTAVNCRYFYIFSVRIPVS*ISIHAE Trigger: TTCAGCATGAATGGATATCCAAGAGACAGGAATTCT...GACACTGAAAATATAAAAGTACCGGCAGTTGACTGCTGTGAATTCTGTGTAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACAAATTTTTCCTCTGCTTaGGGAGATTTGTTCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRENVIHFLLMMRSALRTNFSSA*GDLFLS Trigger: GGACAAGAACAAATCTCCTCAAGCAGAGGAAAAATT...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACATCTTCATCCGTTTGGTaGAGCCACTATATATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRENVIHFLLMMRSALRTSSSVW*SHYIFL Trigger: AAGAAATATATAGTGGCTGCACCAAACGGATGAAGA...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACATACTTCATACGCTTCTaGGACCTCTTTAAATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRENVIHFLLMMRSALRTYFIRF*DLFKFF Trigger: GAAAAATTTAAAGAGGTCGCAGAAGCGTATGAAGTA...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACAAAATCTTCATCCGTTTaGTGCAGCCACTATATATTT | + |
|
Preference number: 4 (lower is better) Translates to: RRENVIHFLLMMRSALRTKSSSV*CSHYIF Trigger: AAATATATAGTGGCTGCACCAAACGGATGAAGATTT...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTCCTGAAGGTACCTCCTaGTCCATCAGTACCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: HARVHTHTHTHTHMHTVLPEGTS*SISTSS Trigger: GCTGGAGGTACTGATGGACAAGGAGGTACCTTCAGG...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS TCA 90 bp | AAAAGGCTGCAAATGTGGCATGAGGATCTCCGTGGAAAGTGTACCTaGAGGTACCTCCTTGTCCATCAGTACCTCCAGCGCCTCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KRLQMWHEDLRGKCT*RYLLVHQYLQRLPS Trigger: TGAAGGGAGGCGCTGGAGGTACTGATGGACAAGGAGGTACCTTCAGGTACACTTTCCACGGAGATCCTCATGCCACATTTGCAGCCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTTTCCTCAGGATCTCTTaGGATGCTGCAGATATGACG | + |
|
Preference number: 5 (lower is better) Translates to: HARVHTHTHTHTHMHTVLFLRIS*DAADMT Trigger: CGTCATATCTGCAGCATCCAAAGAGATCCTGAGGAA...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | CACGCGCGCGTACACACACACACACACACACACACGCACATGCACACAGTACTTGTGAAATTTGAGGGCTaGCTTTCGGTAAGCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HARVHTHTHTHTHMHTVLVKFEG*LSVSLF Trigger: AAAAAGGCTTACCGAAAGCAAGCCCTCAAATTTCAC...AAGTACTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTACGCGCGCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS CCA 90 bp | AGGGTCTTGTTTGAGACGGGAGGGTCCCACAGAATTCCTGTCTCTTaGATATCCATTCATGCTGAATCCAAAGGCACTAAAGGGATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVLFETGGSHRIPVS*ISIHAESKGTKGIS Trigger: GGAGATCCCTTTAGTGCCTTTGGATTCAGCATGAATGGATATCCAAGAGACAGGAATTCTGTGGGACCCTCCCGTCTCAAACAAGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | AACGGTAAAGCACACACATCAATGCATTCTGGTACCAGCCCAACACAGCATCTCGCTGGTCAGGGTTTTTaGGAAATGGCAGCCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: NGKAHTSMHSGTSPTQHLAGQGF*EMAAHI Trigger: GATATGGGCTGCCATTTCCAAAAAACCCTGACCAGC...GAGATGCTGTGTTGGGCTGGTACCAGAATGCATTGATGTGTGTGCTTTACCGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS TCA 90 bp | ATTTCAAAAGGGTTGGAACCTCCGAAAAAGGCTGCAAATGTGGCATaGGGATCTCCGTGGAAAGTGTACCTGAAGGTACCTCCTTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISKGLEPPKKAANVA*GSPWKVYLKVPPCP Trigger: TGGACAAGGAGGTACCTTCAGGTACACTTTCCACGGAGATCCTCATGCCACATTTGCAGCCTTTTTCGGAGGTTCCAACCCTTTTGAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS GCA 90 bp | TCTCCCAAAGAAGATTTCAAAAGGGTTGGAACCTCCGAAAAAGGCTaGAAATGTGGCATGAGGATCTCCGTGGAAAGTGTACCTGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPKEDFKRVGTSEKG*KCGMRISVESVPEG Trigger: ACCTTCAGGTACACTTTCCACGGAGATCCTCATGCCACATTTGCAGCCTTTTTCGGAGGTTCCAACCCTTTTGAAATCTTCTTTGGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | CTTTACACAGAATTCACAGCAGTCAACTGCCGGTACTTTTATATTTTCAGTGTCATGGGAGGGTCTTGTTaGAGACGGGAGGGTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LYTEFTAVNCRYFYIFSVMGGSC*RREGPT Trigger: TGTGGGACCCTCCCGTCTCAAACAAGACCCTCCCAT...GACACTGAAAATATAAAAGTACCGGCAGTTGACTGCTGTGAATTCTGTGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | AACGGTAAAGCACACACATCAATGCATTCTGGTACCAGCCCAACACAGCATCTCGTGAAATTTGAGGGCTaGCTTTCGGTAAGCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NGKAHTSMHSGTSPTQHLVKFEG*LSVSLF Trigger: AAAAAGGCTTACCGAAAGCAAGCCCTCAAATTTCAC...GAGATGCTGTGTTGGGCTGGTACCAGAATGCATTGATGTGTGTGCTTTACCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACAATGGGAGGGTCTTGTTaGAGACGGGAGGGTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RRENVIHFLLMMRSALRTMGGSC*RREGPT Trigger: TGTGGGACCCTCCCGTCTCAAACAAGACCCTCCCAT...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS TCA 90 bp | TTGGTGCAGCCACTATATATTTCTTCAAGCGATACTTTAAGTTCATaGATAATGGGAGGGTCTTGTTTGAGACGGGAGGGTCCCACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LVQPLYISSSDTLSS*IMGGSCLRREGPTE Trigger: TTCTGTGGGACCCTCCCGTCTCAAACAAGACCCTCCCATTATTCATGAACTTAAAGTATCGCTTGAAGAAATATATAGTGGCTGCACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACACCTGAAGGTACCTCCTaGTCCATCAGTACCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRENVIHFLLMMRSALRTPEGTS*SISTSS Trigger: GCTGGAGGTACTGATGGACAAGGAGGTACCTTCAGG...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | TTGCGGTTTAACACCACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGAATAATGGGAGGGTCTaGTTTGAGACGGGAGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRFNTTVIDDCSLGKLCKNNGRV*FETGGS Trigger: GGACCCTCCCGTCTCAAACAAGACCCTCCCATTATT...CTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGTGGTGTTAAACCGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGGTGCATAGCATGAGGCTGCTGGGATACTATTaGGTGTTTCATCGCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TVIDDCSLGKLCKVHSMRLLGYY*VFHRLP Trigger: GGGAAGGCGATGAAACACCAAATAGTATCCCAGCAG...CCTCATGCTATGCACCTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | CTTTACACAGAATTCACAGCAGTCAACTGCCGGTACTTTTATATTTTCAGTGTCTTCCTCAGGATCTCTTaGGATGCTGCAGATATGACG | + |
|
Preference number: 5 (lower is better) Translates to: LYTEFTAVNCRYFYIFSVFLRIS*DAADMT Trigger: CGTCATATCTGCAGCATCCAAAGAGATCCTGAGGAA...GACACTGAAAATATAAAAGTACCGGCAGTTGACTGCTGTGAATTCTGTGTAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACACTGCTGGGATACTATTaGGTGTTTCATCGCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRENVIHFLLMMRSALRTLLGYY*VFHRLP Trigger: GGGAAGGCGATGAAACACCAAATAGTATCCCAGCAG...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACAGCTGGTCAGGGTTTTTaGGAAATGGCAGCCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: RRENVIHFLLMMRSALRTAGQGF*EMAAHI Trigger: GATATGGGCTGCCATTTCCAAAAAACCCTGACCAGC...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTGATAGATGACTGTTCTTTAGGGAAATTATGTAAGGTGCATAGCATGAGGAAGATTTCAAAAGGGTaGGAACCTCCGAAAAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TVIDDCSLGKLCKVHSMRKISKG*EPPKKA Trigger: AGCCTTTTTCGGAGGTTCCAACCCTTTTGAAATCTT...CCTCATGCTATGCACCTTACATAATTTCCCTAAAGAACAGTCATCTATCACTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | CTTTACACAGAATTCACAGCAGTCAACTGCCGGTACTTTTATATTTTCAGTGTCGAAATCTTCATCCGTTaGGTGCAGCCACTATATATT | + |
|
Preference number: 5 (lower is better) Translates to: LYTEFTAVNCRYFYIFSVEIFIR*VQPLYI Trigger: AATATATAGTGGCTGCACCAAACGGATGAAGATTTC...GACACTGAAAATATAAAAGTACCGGCAGTTGACTGCTGTGAATTCTGTGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS-3UTR CAA 90 bp | AGGAGAGAAAATGTCATTCATTTTCTTCTTATGATGAGGTCTGCTTTACGAACAGAAATCTTCATCCGTTaGGTGCAGCCACTATATATT | + |
|
Preference number: 5 (lower is better) Translates to: RRENVIHFLLMMRSALRTEIFIR*VQPLYI Trigger: AATATATAGTGGCTGCACCAAACGGATGAAGATTTC...TGTTCGTAAAGCAGACCTCATCATAAGAAGAAAATGAATGACATTTTCTCTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS CAA 90 bp | TGTGGCATGAGGATCTCCGTGGAAAGTGTACCTGAAGGTACCTCCTaGTCCATCAGTACCTCCAGCGCCTCCCTTCAAGCCTTCTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: CGMRISVESVPEGTS*SISTSSASLQAFFA Trigger: GGCGAAGAAGGCTTGAAGGGAGGCGCTGGAGGTACTGATGGACAAGGAGGTACCTTCAGGTACACTTTCCACGGAGATCCTCATGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS CAA 72 bp | AGGATCTCCGTGGAAAGTGTACCTGAAGGTACCTCCTaGTCCATCAGTACCTCCAGCGCCTCCCTTCAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RISVESVPEGTS*SISTSSASLQA Trigger: GGCTTGAAGGGAGGCGCTGGAGGTACTGATGGACAAGGAGGTACCTTCAGGTACACTTTCCACGGAGATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS TCA 72 bp | CAAATGTGGCATGAGGATCTCCGTGGAAAGTGTACCTaGAGGTACCTCCTTGTCCATCAGTACCTCCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QMWHEDLRGKCT*RYLLVHQYLQR Trigger: GCGCTGGAGGTACTGATGGACAAGGAGGTACCTTCAGGTACACTTTCCACGGAGATCCTCATGCCACATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS TCA 72 bp | GGGTTGGAACCTCCGAAAAAGGCTGCAAATGTGGCATaGGGATCTCCGTGGAAAGTGTACCTGAAGGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: GLEPPKKAANVA*GSPWKVYLKVP Trigger: AGGTACCTTCAGGTACACTTTCCACGGAGATCCTCATGCCACATTTGCAGCCTTTTTCGGAGGTTCCAACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS GCA 72 bp | GGAGGCAGGGAGATGCTTCCTCAGGATCTCTTTGGATaGTGCAGATATGACGTCTGGGAAGGACACATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GGREMLPQDLFG*CRYDVWEGHIK Trigger: TTTGATGTGTCCTTCCCAGACGTCATATCTGCAGCATCCAAAGAGATCCTGAGGAAGCATCTCCCTGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS GCA 72 bp | GAAGATTTCAAAAGGGTTGGAACCTCCGAAAAAGGCTaGAAATGTGGCATGAGGATCTCCGTGGAAAGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: EDFKRVGTSEKG*KCGMRISVESV Trigger: TACACTTTCCACGGAGATCCTCATGCCACATTTGCAGCCTTTTTCGGAGGTTCCAACCCTTTTGAAATCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS CCA 72 bp | TTTGAGACGGGAGGGTCCCACAGAATTCCTGTCTCTTaGATATCCATTCATGCTGAATCCAAAGGCACTAAA | + |
|
Preference number: 6 (lower is better) Translates to: FETGGSHRIPVS*ISIHAESKGTK Trigger: TTTAGTGCCTTTGGATTCAGCATGAATGGATATCCAAGAGACAGGAATTCTGTGGGACCCTCCCGTCTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS CAA 72 bp | AAGCGATACTTTAAGTTCATGAATAATGGGAGGGTCTaGTTTGAGACGGGAGGGTCCCACAGAATTCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KRYFKFMNNGRV*FETGGSHRIPV Trigger: GACAGGAATTCTGTGGGACCCTCCCGTCTCAAACAAGACCCTCCCATTATTCATGAACTTAAAGTATCGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS CAA 90 bp | TATTTCTTCAAGCGATACTTTAAGTTCATGAATAATGGGAGGGTCTaGTTTGAGACGGGAGGGTCCCACAGAATTCCTGTCTCTTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: YFFKRYFKFMNNGRV*FETGGSHRIPVSWI Trigger: TATCCAAGAGACAGGAATTCTGTGGGACCCTCCCGTCTCAAACAAGACCCTCCCATTATTCATGAACTTAAAGTATCGCTTGAAGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS TCA 72 bp | CCACTATATATTTCTTCAAGCGATACTTTAAGTTCATaGATAATGGGAGGGTCTTGTTTGAGACGGGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PLYISSSDTLSS*IMGGSCLRREG Trigger: ACCCTCCCGTCTCAAACAAGACCCTCCCATTATTCATGAACTTAAAGTATCGCTTGAAGAAATATATAGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS GCA 72 bp | TCTCTTTTTAGGATCACTCAGTACTTCATACGCTTCTaGGACCTCTTTAAATTTTTCCTCTGCTTGAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLFRITQYFIRF*DLFKFFLCLRR Trigger: TCTCCTCAAGCAGAGGAAAAATTTAAAGAGGTCGCAGAAGCGTATGAAGTACTGAGTGATCCTAAAAAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS CAA 90 bp | CTCCTTCCGTCAGGATTTAATCTTTTTCGAGAAATCTTCATCCGTTaGGTGCAGCCACTATATATTTCTTCAAGCGATACTTTAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLPSGFNLFREIFIR*VQPLYISSSDTLSS Trigger: TGAACTTAAAGTATCGCTTGAAGAAATATATAGTGGCTGCACCAAACGGATGAAGATTTCTCGAAAAAGATTAAATCCTGACGGAAGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS CCA 72 bp | CAGGATTTAATCTTTTTCGAGAAATCTTCATCCGTTTaGTGCAGCCACTATATATTTCTTCAAGCGATACTT | + |
|
Preference number: 6 (lower is better) Translates to: QDLIFFEKSSSV*CSHYIFLQAIL Trigger: AAGTATCGCTTGAAGAAATATATAGTGGCTGCACCAAACGGATGAAGATTTCTCGAAAAAGATTAAATCCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||
| CDS CAA 72 bp | TCAGGATTTAATCTTTTTCGAGAAATCTTCATCCGTTaGGTGCAGCCACTATATATTTCTTCAAGCGATACT | + |
|
Preference number: 6 (lower is better) Translates to: SGFNLFREIFIR*VQPLYISSSDT Trigger: AGTATCGCTTGAAGAAATATATAGTGGCTGCACCAAACGGATGAAGATTTCTCGAAAAAGATTAAATCCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029669.4 ENSMUST00000050073.13 ENSMUST00000144950.8 |
||