Pregenerated sensors for DNAJB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026203Ensembl transcript IDs: ENSMUST00000185403.7, ENSMUST00000187058.7, ENSMUST00000188290.7, ENSMUST00000188346.7, ENSMUST00000188931.7, ENSMUST00000190445.2
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAGGCCCCGCACCACCAGTTTCCGATCGAGAAGGACCACTTCCTaGCCCGGTCAGCCCTTCCCGGCCATAGCGGTCATAGATCTCCCG | + |
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Preference number: 1 (lower is better) Translates to: ARPRTTSFRSRRTTS*PGQPFPAIAVIDLP Trigger: CGGGAGATCTATGACCGCTATGGCCGGGAAGGGCTGACCGGGGCAGGAAGTGGTCCTTCTCGATCGGAAACTGGTGGTGCGGGGCCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR GCA 90 bp | GGCCGGACCTGCATGACCCCCAGCCCAGGGGCAACTGAAGGTTGCTaGTCACGACGGCTCAGCTCCAAGCCTAGTGCCAGGTCATCTGGG | + |
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Preference number: 1 (lower is better) Translates to: GRTCMTPSPGATEGC*SRRLSSKPSARSSG Trigger: CCCAGATGACCTGGCACTAGGCTTGGAGCTGAGCCGTCGTGAGCAGCAACCTTCAGTTGCCCCTGGGCTGGGGGTCATGCAGGTCCGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR GCA 90 bp | GGCCAAGGACAGCAGAGGCTCCGCTCGCTCGCTCGGCCTGCGCTGTaGCCTGGGAGAAAGTTGCCAACTCAAGTTCAGAGCATGCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: GQGQQRLRSLARPAL*PGRKLPTQVQSMPG Trigger: GCCTGGCATGCTCTGAACTTGAGTTGGCAACTTTCTCCCAGGGCACAGCGCAGGCCGAGCGAGCGAGCGGAGCCTCTGCTGTCCTTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR GCA 90 bp | GTCGGCCGGACCTGCATGACCCCCAGCCCAGGGGCAACTGAAGGTTaGTGCTCACGACGGCTCAGCTCCAAGCCTAGTGCCAGGTCATCT | + |
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Preference number: 1 (lower is better) Translates to: VGRTCMTPSPGATEG*CSRRLSSKPSARSS Trigger: AGATGACCTGGCACTAGGCTTGGAGCTGAGCCGTCGTGAGCAGCAACCTTCAGTTGCCCCTGGGCTGGGGGTCATGCAGGTCCGGCCGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR GCA 90 bp | AGGTGGGTGGGTGAGAGCTTAGTTCTACACAGAAACCAGGAGGGCTaGAGCTGGCCAAGGACAGCAGAGGCTCCGCTCGCTCGCTCGGCC | + |
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Preference number: 1 (lower is better) Translates to: RWVGESLVLHRNQEG*SWPRTAEAPLARSA Trigger: GGCCGAGCGAGCGAGCGGAGCCTCTGCTGTCCTTGGCCAGCTGCAGCCCTCCTGGTTTCTGTGTAGAACTAAGCTCTCACCCACCCACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR CCA 90 bp | AGGACAGCAGAGGCTCCGCTCGCTCGCTCGGCCTGCGCTGTGCCCTaGGAGAAAGTTGCCAACTCAAGTTCAGAGCATGCCAGGCCAAGT | + |
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Preference number: 1 (lower is better) Translates to: RTAEAPLARSACAVP*EKVANSSSEHARPS Trigger: ACTTGGCCTGGCATGCTCTGAACTTGAGTTGGCAACTTTCTCCCAGGGCACAGCGCAGGCCGAGCGAGCGAGCGGAGCCTCTGCTGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR TCA 90 bp | AGGGGAGGACAGCAGCACCAGAGGAGGAGCGAGAAGGTGGGTGGGTaGGAGCTTAGTTCTACACAGAAACCAGGAGGGCTGCAGCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: RGGQQHQRRSEKVGG*ELSSTQKPGGLQLA Trigger: GGCCAGCTGCAGCCCTCCTGGTTTCTGTGTAGAACTAAGCTCTCACCCACCCACCTTCTCGCTCCTCCTCTGGTGCTGCTGTCCTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR CCA 90 bp | GAGAGCGGAGGGGAGGACAGCAGCACCAGAGGAGGAGCGAGAAGGTaGGTGGGTGAGAGCTTAGTTCTACACAGAAACCAGGAGGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: ESGGEDSSTRGGARR*VGESLVLHRNQEGC Trigger: GCAGCCCTCCTGGTTTCTGTGTAGAACTAAGCTCTCACCCACCCACCTTCTCGCTCCTCCTCTGGTGCTGCTGTCCTCCCCTCCGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR CCA 90 bp | TCCTGCCCGTTCTCCATGATTCTGCGTGTGGTGATGCGGCGGCCTTaGACAAAGGTGGTGGACGTAGAAACGGAGCGGAAAGCACCAGCC | + |
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Preference number: 1 (lower is better) Translates to: SCPFSMILRVVMRRP*TKVVDVETERKAPA Trigger: GGCTGGTGCTTTCCGCTCCGTTTCTACGTCCACCACCTTTGTCCAAGGCCGCCGCATCACCACACGCAGAATCATGGAGAACGGGCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR CCA 90 bp | CTGGCTTCTGCCCAGCCGCCTCCATCTCTGACAGGCTGTAAGCCATaGCGAGCTGCAGGTCCTCATCCTCAGAAAGATCATGGTCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LASAQPPPSLTGCKP*RAAGPHPQKDHGQG Trigger: CCCCTGACCATGATCTTTCTGAGGATGAGGACCTGCAGCTCGCCATGGCTTACAGCCTGTCAGAGATGGAGGCGGCTGGGCAGAAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR GCA 90 bp | CAGGGACCTATCAGCCCTGGACAGAGTACAACAGATCCCTGCCCATaGTACAGAACGGTGGACCTGGGAGGGAAACATGTGGAGGGACAG | + |
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Preference number: 1 (lower is better) Translates to: QGPISPGQSTTDPCP*YRTVDLGGKHVEGQ Trigger: CTGTCCCTCCACATGTTTCCCTCCCAGGTCCACCGTTCTGTAGCATGGGCAGGGATCTGTTGTACTCTGTCCAGGGCTGATAGGTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR CCA 90 bp | ATCCCTGCCCATGCTACAGAACGGTGGACCTGGGAGGGAAACATGTaGAGGGACAGAGTTTGGAATCCTGCGGCTTGGGCCACACTATTC | + |
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Preference number: 1 (lower is better) Translates to: IPAHATERWTWEGNM*RDRVWNPAAWATLF Trigger: GAATAGTGTGGCCCAAGCCGCAGGATTCCAAACTCTGTCCCTCCACATGTTTCCCTCCCAGGTCCACCGTTCTGTAGCATGGGCAGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR GCA 90 bp | TTTACCCAGGGACCTATCAGCCCTGGACAGAGTACAACAGATCCCTaGCCATGCTACAGAACGGTGGACCTGGGAGGGAAACATGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: FTQGPISPGQSTTDP*PCYRTVDLGGKHVE Trigger: CTCCACATGTTTCCCTCCCAGGTCCACCGTTCTGTAGCATGGGCAGGGATCTGTTGTACTCTGTCCAGGGCTGATAGGTCCCTGGGTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR GCA 90 bp | GTGTTCCCTCCTAGCACACTGGGGAGGGCGCTGTCCTGTTGGAACTaGAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTGG | + |
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Preference number: 1 (lower is better) Translates to: VFPPSTLGRALSCWN*SNSVSRISSSEHIW Trigger: CCAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGCAGTTCCAACAGGACAGCGCCCTCCCCAGTGTGCTAGGAGGGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR GCA 90 bp | GTGTTCCCTCCTAGCACACTGGGGAGGGCGCTGTCCTGTTGGAACTaGAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTGC | + |
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Preference number: 1 (lower is better) Translates to: VFPPSTLGRALSCWN*SNSVSRISSSEHIC Trigger: GCAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGCAGTTCCAACAGGACAGCGCCCTCCCCAGTGTGCTAGGAGGGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR CCA 90 bp | TGGGAGGGAAACATGTGGAGGGACAGAGTTTGGAATCCTGCGGCTTaGGCCACACTATTCTGCACTCCTGACAGTGAGCTGGACTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: WEGNMWRDRVWNPAA*ATLFCTPDSELDSK Trigger: CTTGGAGTCCAGCTCACTGTCAGGAGTGCAGAATAGTGTGGCCCAAGCCGCAGGATTCCAAACTCTGTCCCTCCACATGTTTCCCTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR GCA 90 bp | GTGTTCCCTCCTAGCACACTGGGGAGGGCGCTGTCCTGTTGGAACTaGAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTCT | + |
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Preference number: 1 (lower is better) Translates to: VFPPSTLGRALSCWN*SNSVSRISSSEHIS Trigger: AGAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGCAGTTCCAACAGGACAGCGCCCTCCCCAGTGTGCTAGGAGGGAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| 3UTR GCA 90 bp | AGAGGTCAAAGAAAGCCATTCAAGCAATATGTCCAACGCTCCCTCTaGATGCCAGTCCTTGCCATACACACTCCAGCCAAGGCAGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: RGQRKPFKQYVQRSL*MPVLAIHTPAKAAS Trigger: GGAGGCTGCCTTGGCTGGAGTGTGTATGGCAAGGACTGGCATGCAGAGGGAGCGTTGGACATATTGCTTGAATGGCTTTCTTTGACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| 3UTR CCA 90 bp | AATGTAGTGTTCCCTCCTAGCACACTGGGGAGGGCGCTGTCCTGTTaGAACTGCAGCAACTCTGTATCCAGGATATCCAGCTCAGAACAC | + |
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Preference number: 1 (lower is better) Translates to: NVVFPPSTLGRALSC*NCSNSVSRISSSEH Trigger: GTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGCAGTTCCAACAGGACAGCGCCCTCCCCAGTGTGCTAGGAGGGAACACTACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185403.7 ENSMUST00000188931.7 ENSMUST00000190445.2 |
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| 3UTR GCA 90 bp | GCTTTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTaGTTTGATGGGTCTCAAAGGCTCAGTGTTAACAGAGGCCGGCCA | + |
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Preference number: 1 (lower is better) Translates to: ALFASVSPQSELSSS*FDGSQRLSVNRGRP Trigger: TGGCCGGCCTCTGTTAACACTGAGCCTTTGAGACCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| 3UTR TCA 90 bp | GAAGAGAAAGTGAAGAAAGGGCCCGTGAGTCGGGGACCCTGGTTCTaGAGCTCCGAGAAGACACCCAAGTCATCAAAGAGCTCTGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: EEKVKKGPVSRGPWF*SSEKTPKSSKSSEK Trigger: TTTTTCAGAGCTCTTTGATGACTTGGGTGTCTTCTCGGAGCTTCAGAACCAGGGTCCCCGACTCACGGGCCCTTTCTTCACTTTCTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGGCCAAGGACAGCAGAGGCTCCGCTCGCTCGCTCGGCCTGCGCTGTGCCTCCAACCAGTGCCTCTaGGCTCCACAGGCACTGATG | + |
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Preference number: 2 (lower is better) Translates to: QLAKDSRGSARSLGLRCASNQCL*APQALM Trigger: CATCAGTGCCTGTGGAGCTCAGAGGCACTGGTTGGA...GGCACAGCGCAGGCCGAGCGAGCGAGCGGAGCCTCTGCTGTCCTTGGCCAGCTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR GCA 90 bp | ATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCCCGAAGGGTGGGCGTTaGAGAGAGCGGAGGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: IHTPAKAASFPTQVLPARPKGGR*RERRGG Trigger: TCCTCCCCTCCGCTCTCTGCAACGCCCACCCTTCGG...GCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCCATCCACAGGAGGGCTGCAGCTaGCCAAGGACAGCAGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: PAKAASFPTQVLPARIHPQEGCS*PRTAEA Trigger: AGCCTCTGCTGTCCTTGGCCAGCTGCAGCCCTCCTG...TGGATGGATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTGGGTCACCCTGGCCCTATCCCACCTCTCCAAGGATAGCCAGCCTCACCCTAGCCAAGCAGCAATaGAAGCAAGCGTTGCGGCCG | + |
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Preference number: 2 (lower is better) Translates to: PSGSPWPYPTSPRIASLTLAKQQ*KQALRP Trigger: CGGCCGCAACGCTTGCTTTCATTGCTGCTTGGCTAG...GGTGAGGCTGGCTATCCTTGGAGAGGTGGGATAGGGCCAGGGTGACCCAGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR CAA 90 bp | AGGCTCCGCTCGCTCGCTCGGCCTGCGCTGTGCCCTGGGAGAAAGTaGCCAACTCAAGTTCAGAGCATGCCAGGCCAAGTCCTCCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: RLRSLARPALCPGRK*PTQVQSMPGQVLLS Trigger: AGAAAGGAGGACTTGGCCTGGCATGCTCTGAACTTGAGTTGGCAACTTTCTCCCAGGGCACAGCGCAGGCCGAGCGAGCGAGCGGAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR CAA 90 bp | CATGCACTCCTAGGTCAGCCCTGTGGCCGGCCCCTAAGCTCTCCTTaGCAGGTAGCACAAATACACTCCCCACCTAGGCCTCCCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: HALLGQPCGRPLSSP*QVAQIHSPPRPPSG Trigger: CCCAGAGGGAGGCCTAGGTGGGGAGTGTATTTGTGCTACCTGCAAAGGAGAGCTTAGGGGCCGGCCACAGGGCTGACCTAGGAGTGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTGGGTCACCCTGGCCCTATCCCACCTCTCCAAGGATAGCCAGCCTCACCGAAGGGAAGAGGAGTTaGCTCTGGTTGAGACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PSGSPWPYPTSPRIASLTEGKRS*LWLRLW Trigger: CCAGAGTCTCAACCAGAGTCAACTCCTCTTCCCTTC...GGTGAGGCTGGCTATCCTTGGAGAGGTGGGATAGGGCCAGGGTGACCCAGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR GCA 90 bp | CACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCTGGGCCACACTATTCTaGACTCCTGACAGTGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: HTPAKAASFPTQVLPARIWATLF*TPDSEL Trigger: CAGCTCACTGTCAGGAGTGCAGAATAGTGTGGCCCA...GATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR TCA 90 bp | CGGCGGCCTTGGACAAAGGTGGTGGACGTAGAAACGGAGCGGAAAGCACCAGCCGTCATCAAAGAGCTCTaGAAAAGGGTCTCCGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RRPWTKVVDVETERKAPAVIKEL*KRVSAP Trigger: GGGAGCGGAGACCCTTTTTCAGAGCTCTTTGATGAC...GGCTGGTGCTTTCCGCTCCGTTTCTACGTCCACCACCTTTGTCCAAGGCCGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR-3UTR CCA 90 bp | GAGCATGCACTCCTAGGTCAGCCCTGTGGCCGGCCCCTAAGCTCTCCTTTGCAGGGGACCTATCAGCCCTaGACAGAGTACAACAGATCC | + |
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Preference number: 2 (lower is better) Translates to: EHALLGQPCGRPLSSPLQGTYQP*TEYNRS Trigger: GGATCTGTTGTACTCTGTCCAGGGCTGATAGGTCCC...CTGCAAAGGAGAGCTTAGGGGCCGGCCACAGGGCTGACCTAGGAGTGCATGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR GCA 90 bp | ATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCAGTACAACAGATCCCTaGCCATGCTACAGAACGGTG | + |
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Preference number: 2 (lower is better) Translates to: IHTPAKAASFPTQVLPARSTTDP*PCYRTV Trigger: CACCGTTCTGTAGCATGGGCAGGGATCTGTTGTACT...GCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR CCA 90 bp | TGGCGAGCTGCAGGTCCTCATCCTCAGAAAGATCATGGTCAGGGGGACGAGAGAGTGATGCGGCGGCCTTaGACAAAGGTGGTGGACGTA | + |
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Preference number: 2 (lower is better) Translates to: WRAAGPHPQKDHGQGDERVMRRP*TKVVDV Trigger: TACGTCCACCACCTTTGTCCAAGGCCGCCGCATCAC...TCTCTCGTCCCCCTGACCATGATCTTTCTGAGGATGAGGACCTGCAGCTCGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR CAA 90 bp | AGCCATTCAAGCAATATGTCCAACGCTCCCTCTGCATGCCAGTCCTaGCCATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SHSSNMSNAPSACQS*PYTLQPRQPPFPRR Trigger: CCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATGGCAAGGACTGGCATGCAGAGGGAGCGTTGGACATATTGCTTGAATGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| 3UTR-3UTR TCA 90 bp | GCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTGCTGGCTTCTGCCCACACCAGCCCCCGGGCTaGAGGAGAAAGATGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: ATLYPGYPAQNTSAGFCPHQPPG*RRKMRR Trigger: CCTCCTCATCTTTCTCCTTCAGCCCGGGGGCTGGTG...TGGGCAGAAGCCAGCAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCTGCATGCCAGTCCTTGCCATACACACTCCAGCCAAGGCAGCCTCCTTTGGAGGAGCGAGAAGGTaGGTGGGTGAGAGCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: SLCMPVLAIHTPAKAASFGGARR*VGESLV Trigger: AACTAAGCTCTCACCCACCCACCTTCTCGCTCCTCC...AAAGGAGGCTGCCTTGGCTGGAGTGTGTATGGCAAGGACTGGCATGCAGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGTCTGCCTGCGCTGTGCCCTaGGAGAAAGTTGCCAACTCA | + |
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Preference number: 2 (lower is better) Translates to: FASVSPQSELSSSCFDGSACAVP*EKVANS Trigger: TGAGTTGGCAACTTTCTCCCAGGGCACAGCGCAGGC...AGACCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCTGCATGCCAGTCCTTGCCATACACACTCCAGCCAAGGCAGCCTCCTTTGCCCCAGCATCTTCCTaGGCTTCAAAGAAAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLCMPVLAIHTPAKAASFAPASS*ASKKRR Trigger: TCTCCTTTTCTTTGAAGCCCAGGAAGATGCTGGGGC...AAAGGAGGCTGCCTTGGCTGGAGTGTGTATGGCAAGGACTGGCATGCAGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR CCA 90 bp | CTGCGTGTGGTGATGCGGCGGCCTTGGACAAAGGTGGTGGACGTAGAAACGGAGAGGAGAAATCGGAGTTaGCAGGAAAGGAAGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LRVVMRRPWTKVVDVETERRNRS*QERKKR Trigger: TCTCTTCTTCCTTTCCTGCCAACTCCGATTTCTCCT...CTCCGTTTCTACGTCCACCACCTTTGTCCAAGGCCGCCGCATCACCACACGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGATGGGTCTCAAAGGCTCAGTGTTAACAGAGGCCGGCCATAGCCTGCTCGCCCTGGGAGAAAGTTaGCAACTCAAGTTCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: ALMGLKGSVLTEAGHSLLALGES*QLKFRA Trigger: TGCTCTGAACTTGAGTTGGCAACTTTCTCCCAGGGC...GAGCAGGCTATGGCCGGCCTCTGTTAACACTGAGCCTTTGAGACCCATCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR CAA 90 bp | TATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTaGATGGGTCTCAAAGGCTCAGTGTTAACAGAGGCCGGCCATAGC | + |
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Preference number: 2 (lower is better) Translates to: YLPPFPLSLSSAHLA*MGLKGSVLTEAGHS Trigger: GCTATGGCCGGCCTCTGTTAACACTGAGCCTTTGAGACCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGATGGGTCTCAAAGGCTCAGTGTTAACAGAGGCCGGCCATAGCCTGCTCTGGGAGGGAAACATGTaGAGGGACAGAGTTTGGAAT | + |
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Preference number: 2 (lower is better) Translates to: ALMGLKGSVLTEAGHSLLWEGNM*RDRVWN Trigger: ATTCCAAACTCTGTCCCTCCACATGTTTCCCTCCCA...GAGCAGGCTATGGCCGGCCTCTGTTAACACTGAGCCTTTGAGACCCATCAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGTCTAGGCAGGAGGACAGGTaGCTCATGGAGGATGAATTG | + |
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Preference number: 2 (lower is better) Translates to: FASVSPQSELSSSCFDGSRQEDR*LMEDEL Trigger: CAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCT...AGACCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| 3UTR-3UTR TCA 90 bp | GCTTTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGAGTTGACTCTGGTTaGGACTCTGGAGGGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: ALFASVSPQSELSSSCFDGVDSG*DSGGLR Trigger: TCTCAGCCCTCCAGAGTCTCAACCAGAGTCAACTCC...ATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGGTTGCCCAAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTGCTCACGAGCCAAGTCCAGGGTaGATTGCATTCTGGGACTTG | + |
|
Preference number: 2 (lower is better) Translates to: PGCPRENKLSQMLQESAHEPSPG*IAFWDL Trigger: CAAGTCCCAGAATGCAATGCACCCTGGACTTGGCTC...GTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTTGGGCAACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAAAGAATCTCTGGTTGAGACTCTaGAGGGCTGAGAGGCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: PRQEDRWLMEDELMIRKNLWLRL*RAERLP Trigger: TGGAAGCCTCTCAGCCCTCCAGAGTCTCAACCAGAG...ATTCTTTCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR-3UTR TCA 90 bp | CCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAAAGAATGAGAAGGTGGGTGGGTaGGAGCTTAGTTCTACACAG | + |
|
Preference number: 2 (lower is better) Translates to: PRQEDRWLMEDELMIRKNEKVGG*ELSSTQ Trigger: CTGTGTAGAACTAAGCTCTCACCCACCCACCTTCTC...ATTCTTTCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTGCTGGCTTCTGCCATCTGGGACACCATTaGTTGACACTGACTTCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: AATLYPGYPAQNTSAGFCHLGHH*LTLTSV Trigger: AACTGAAGTCAGTGTCAATCAATGGTGTCCCAGATG...GCAGAAGCCAGCAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGTTGCCCAAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTGCTCACGAGCAGCTCTTCCCCTaGAATAAGTGTTACAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PGCPRENKLSQMLQESAHEQLFP*NKCYKS Trigger: GCTCTTGTAACACTTATTCCAGGGGAAGAGCTGCTC...GTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTTGGGCAACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGTCTGTGGCTCATGGAGGATaGATTGATGATAAGAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: FASVSPQSELSSSCFDGSVAHGG*IDDKKE Trigger: TTCTTTCTTATCATCAATTCATCCTCCATGAGCCAC...AGACCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGTCTCATCAGCAACATAAATaGCAGAAAAAGACTTGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: FASVSPQSELSSSCFDGSHQQHK*QKKTWA Trigger: TGCCCAAGTCTTTTTCTGCCATTTATGTTGCTGATG...AGACCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR TCA 72 bp | CGGCCGGACCTGCATGACCCCCAGCCCAGGGGCAACTaGAGGTTGCTGCTCACGACGGCTCAGCTCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RPDLHDPQPRGN*RLLLTTAQLQA Trigger: GGCTTGGAGCTGAGCCGTCGTGAGCAGCAACCTTCAGTTGCCCCTGGGCTGGGGGTCATGCAGGTCCGGCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| 3UTR-3UTR CAA 90 bp | CATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGGCCGAAGGGTGGGCGTaGCAGAGAGCGGAGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HTHSSQGSLLSHAGSASPAEGWA*QRAEGR Trigger: CCTCCCCTCCGCTCTCTGCAACGCCCACCCTTCGGC...CGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR GCA 72 bp | CAGCAGAGGCTCCGCTCGCTCGCTCGGCCTGCGCTGTaGCCTGGGAGAAAGTTGCCAACTCAAGTTCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QQRLRSLARPAL*PGRKLPTQVQS Trigger: GCTCTGAACTTGAGTTGGCAACTTTCTCCCAGGGCACAGCGCAGGCCGAGCGAGCGAGCGGAGCCTCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR GCA 72 bp | CCAAGGACAGCAGAGGCTCCGCTCGCTCGCTCGGCCTaGGCTGTGCCCTGGGAGAAAGTTGCCAACTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: PRTAEAPLARSA*AVPWEKVANSS Trigger: ACTTGAGTTGGCAACTTTCTCCCAGGGCACAGCGCAGGCCGAGCGAGCGAGCGGAGCCTCTGCTGTCCTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR GCA 72 bp | CTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTaGCAGCCCGCATCCATCCAAGACCGTGCCCTACCT | + |
|
Preference number: 3 (lower is better) Translates to: LQPRQPPFPRRF*QPASIQDRALP Trigger: AGGTAGGGCACGGTCTTGGATGGATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| 3UTR CCA 72 bp | GAGGCTCCGCTCGCTCGCTCGGCCTGCGCTGTGCCCTaGGAGAAAGTTGCCAACTCAAGTTCAGAGCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: EAPLARSACAVP*EKVANSSSEHA Trigger: GGCATGCTCTGAACTTGAGTTGGCAACTTTCTCCCAGGGCACAGCGCAGGCCGAGCGAGCGAGCGGAGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR TCA 72 bp | CACATCTGCTGGCTTCTGCCCAGCCGCCTCCATCTCTaGCAGGCTGTAAGCCATGGCGAGCTGCAGGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HICWLLPSRLHL*QAVSHGELQVL Trigger: GAGGACCTGCAGCTCGCCATGGCTTACAGCCTGTCAGAGATGGAGGCGGCTGGGCAGAAGCCAGCAGATGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| 3UTR GCA 72 bp | CGCACCACCAGTTTCCGATCGAGAAGGACCACTTCCTaGCCCGGTCAGCCCTTCCCGGCCATAGCGGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: RTTSFRSRRTTS*PGQPFPAIAVI Trigger: TATGACCGCTATGGCCGGGAAGGGCTGACCGGGGCAGGAAGTGGTCCTTCTCGATCGGAAACTGGTGGTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCTGCATGCCAGTCCTTGCCATACACACTCCAGCCAAGGCAGCCTCCTTTGAGGGCGCTGTCCTGTaGGAACTGCAGCAACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SLCMPVLAIHTPAKAASFEGAVL*ELQQLC Trigger: ACAGAGTTGCTGCAGTTCCAACAGGACAGCGCCCTC...AAAGGAGGCTGCCTTGGCTGGAGTGTGTATGGCAAGGACTGGCATGCAGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| 3UTR CCA 72 bp | CATGCTACAGAACGGTGGACCTGGGAGGGAAACATGTaGAGGGACAGAGTTTGGAATCCTGCGGCTTGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HATERWTWEGNM*RDRVWNPAAWA Trigger: GGCCCAAGCCGCAGGATTCCAAACTCTGTCCCTCCACATGTTTCCCTCCCAGGTCCACCGTTCTGTAGCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR CCA 72 bp | GCCCAGCCGCCTCCATCTCTGACAGGCTGTAAGCCATaGCGAGCTGCAGGTCCTCATCCTCAGAAAGATCAT | + |
|
Preference number: 3 (lower is better) Translates to: AQPPPSLTGCKP*RAAGPHPQKDH Trigger: ATGATCTTTCTGAGGATGAGGACCTGCAGCTCGCCATGGCTTACAGCCTGTCAGAGATGGAGGCGGCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| 3UTR TCA 72 bp | GTGAAGAAAGGGCCCGTGAGTCGGGGACCCTGGTTCTaGAGCTCCGAGAAGACACCCAAGTCATCAAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VKKGPVSRGPWF*SSEKTPKSSKS Trigger: GCTCTTTGATGACTTGGGTGTCTTCTCGGAGCTTCAGAACCAGGGTCCCCGACTCACGGGCCCTTTCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| 3UTR GCA 72 bp | GCAATATGTCCAACGCTCCCTCTGCATGCCAGTCCTTaGCATACACACTCCAGCCAAGGCAGCCTCCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: AICPTLPLHASP*HTHSSQGSLLS Trigger: GGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATGGCAAGGACTGGCATGCAGAGGGAGCGTTGGACATATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| 3UTR GCA 72 bp | CTCTGTATCCAGGATATCCAGCTCAGAACACATCTCTaGCTAGTCCTGTGGCCAGGGCAGGCTGAGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LCIQDIQLRTHL*LVLWPGQAEAA Trigger: TGCTGCCTCAGCCTGCCCTGGCCACAGGACTAGGCAGAGATGTGTTCTGAGCTGGATATCCTGGATACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
||
| 3UTR TCA 72 bp | AAAGAAAAGGAGAAGGGAGACCTAGCCAAGCAGCAATaGAAGCAAGCGTTGCGGCCGAAGGGTGGGCGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: KEKEKGDLAKQQ*KQALRPKGGRC Trigger: GCAACGCCCACCCTTCGGCCGCAACGCTTGCTTTCATTGCTGCTTGGCTAGGTCTCCCTTCTCCTTTTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR GCA 72 bp | AGAGTTTGGAATCCTGCGGCTTGGGCCACACTATTCTaGACTCCTGACAGTGAGCTGGACTCCAAGTCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RVWNPAAWATLF*TPDSELDSKSG Trigger: TCCCGACTTGGAGTCCAGCTCACTGTCAGGAGTGCAGAATAGTGTGGCCCAAGCCGCAGGATTCCAAACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR GCA 72 bp | ATCAGCCCTGGACAGAGTACAACAGATCCCTGCCCATaGTACAGAACGGTGGACCTGGGAGGGAAACATGTG | + |
|
Preference number: 3 (lower is better) Translates to: ISPGQSTTDPCP*YRTVDLGGKHV Trigger: CACATGTTTCCCTCCCAGGTCCACCGTTCTGTAGCATGGGCAGGGATCTGTTGTACTCTGTCCAGGGCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR GCA 72 bp | CCTAGCACACTGGGGAGGGCGCTGTCCTGTTGGAACTaGAGCAACTCTGTATCCAGGATATCCAGCTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PSTLGRALSCWN*SNSVSRISSSE Trigger: TTCTGAGCTGGATATCCTGGATACAGAGTTGCTGCAGTTCCAACAGGACAGCGCCCTCCCCAGTGTGCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000185403.7 ENSMUST00000188931.7 ENSMUST00000190445.2 |
||
| 3UTR GCA 72 bp | TTCAGTTGTCCATCCTCTTCCACTTCTACCCGCTCCTaGCCGTTCTCCATGATTCTGCGTGTGGTGATGCGG | + |
|
Preference number: 3 (lower is better) Translates to: FSCPSSSTSTRS*PFSMILRVVMR Trigger: CCGCATCACCACACGCAGAATCATGGAGAACGGGCAGGAGCGGGTAGAAGTGGAAGAGGATGGACAACTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| 3UTR CCA 72 bp | CCAAATCCTGGGCTTTACCCAGGGACCTATCAGCCCTaGACAGAGTACAACAGATCCCTGCCCATGCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: PNPGLYPGTYQP*TEYNRSLPMLQ Trigger: CTGTAGCATGGGCAGGGATCTGTTGTACTCTGTCCAGGGCTGATAGGTCCCTGGGTAAAGCCCAGGATTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR CCA 72 bp | TTCTCCATGATTCTGCGTGTGGTGATGCGGCGGCCTTaGACAAAGGTGGTGGACGTAGAAACGGAGCGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSMILRVVMRRP*TKVVDVETERK Trigger: TTTCCGCTCCGTTTCTACGTCCACCACCTTTGTCCAAGGCCGCCGCATCACCACACGCAGAATCATGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR-3UTR CAA 90 bp | AGGTCATCTGGGACACCATTGATTGACACTGACTTCAGTTGTCCATCCTCTTCCGGTGATGCGGCGGCCTaGGACAAAGGTGGTGGACGT | + |
|
Preference number: 3 (lower is better) Translates to: RSSGTPLIDTDFSCPSSSGDAAA*DKGGGR Trigger: ACGTCCACCACCTTTGTCCAAGGCCGCCGCATCACC...GGAAGAGGATGGACAACTGAAGTCAGTGTCAATCAATGGTGTCCCAGATGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| 3UTR TCA 72 bp | AAGCTCCGAGAAGACACCCAAGTCATCAAAGAGCTCTaGAAAAGGGTCTCCGCTCCCGAAGAACTCCCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KLREDTQVIKEL*KRVSAPEELPE Trigger: TTCCGGGAGTTCTTCGGGAGCGGAGACCCTTTTTCAGAGCTCTTTGATGACTTGGGTGTCTTCTCGGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAAAGAATGAGGGCGCTGTCCTGTaGGAACTGCAGCAACTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PRQEDRWLMEDELMIRKNEGAVL*ELQQLC Trigger: ACAGAGTTGCTGCAGTTCCAACAGGACAGCGCCCTC...ATTCTTTCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| 3UTR-3UTR CAA 90 bp | CCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAAAGAATATGGCAGAAAAAGACTaGGGCACAAAAGGCCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: PRQEDRWLMEDELMIRKNMAEKD*GTKGPP Trigger: GGGTGGGCCTTTTGTGCCCAAGTCTTTTTCTGCCAT...ATTCTTTCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| 3UTR GCA 72 bp | GGAATAAGTGTTACAAGAGCCAAGTCCAGGGTGCATTaGATTCTGGGACTTGTAGTCCGCAAAAGACAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: GISVTRAKSRVH*ILGLVVRKRQR Trigger: GCGCTGTCTTTTGCGGACTACAAGTCCCAGAATGCAATGCACCCTGGACTTGGCTCTTGTAACACTTATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| 3UTR CCA 72 bp | CATAGATCTCCCGTTTGTGCTCTAGAAGAAGAGACCTaGTCATTCCTCCCTTTAGGAAAGTTATCGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HRSPVCALEEET*SFLPLGKLSPL Trigger: GAGGGGCGATAACTTTCCTAAAGGGAGGAATGACCAGGTCTCTTCTTCTAGAGCACAAACGGGAGATCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| 3UTR GCA 72 bp | AAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTaGTCACTTCAACCCGAGTCTAGCAAGAAGTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: KGKQTLSDATGI*SLQPESSKKCH Trigger: ATGGCACTTCTTGCTAGACTCGGGTTGAAGTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | ACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCCTCGGCCGGACCTGCATaGCCCCCAGCCCAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLQPRQPPFPRRFCQPASSAGPA*PPAQGQ Trigger: TTGCCCCTGGGCTGGGGGTCATGCAGGTCCGGCCGA...GGATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | CCATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCTCGGCCGGACCTGCATaGCCCCCAGCCCAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PYTLQPRQPPFPRRFCQPSAGPA*PPAQGQ Trigger: TTGCCCCTGGGCTGGGGGTCATGCAGGTCCGGCCGA...GGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | CATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGTCGGCCGGACCTGCATaGCCCCCAGCCCAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTHSSQGSLLSHAGSASPSAGPA*PPAQGQ Trigger: TTGCCCCTGGGCTGGGGGTCATGCAGGTCCGGCCGA...CGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGCCAAGGACAGCAGAGGCTCCGCTCGCTCGCTCGGCCTGCGCTGTGCCAGAGGCCTTCTCCTCTaGGGACGGGCTGAGTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QLAKDSRGSARSLGLRCARGLLL*GRAEFS Trigger: GCTAAACTCAGCCCGTCCTCAGAGGAGAAGGCCTCT...GGCACAGCGCAGGCCGAGCGAGCGAGCGGAGCCTCTGCTGTCCTTGGCCAGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | CCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCCATCCACACCAGCCCCCGGGCTaGAGGAGAAAGATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAKAASFPTQVLPARIHPHQPPG*RRKMRR Trigger: CCTCCTCATCTTTCTCCTTCAGCCCGGGGGCTGGTG...TGGATGGATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | ACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCCCACCAGCCCCCGGGCTaGAGGAGAAAGATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLQPRQPPFPRRFCQPASHQPPG*RRKMRR Trigger: CCTCCTCATCTTTCTCCTTCAGCCCGGGGGCTGGTG...GGATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR GCA 90 bp | GAGCATGCACTCCTAGGTCAGCCCTGTGGCCGGCCCCTAAGCTCTCCTTTGCAGATGCTGTCGTTGCTGTaGCCCCCGCCCACCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EHALLGQPCGRPLSSPLQMLSLL*PPPTCW Trigger: CCAGCAGGTGGGCGGGGGGCACAGCAACGACAGCAT...CTGCAAAGGAGAGCTTAGGGGCCGGCCACAGGGCTGACCTAGGAGTGCATGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | CATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCACCAGCCCCCGGGCTaGAGGAGAAAGATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHSSQGSLLSHAGSASPHQPPG*RRKMRR Trigger: CCTCCTCATCTTTCTCCTTCAGCCCGGGGGCTGGTG...CGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | CATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGAGCCGCCTCCATCTCTaGCAGGCTGTAAGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHSSQGSLLSHAGSASPSRLHL*QAVSHG Trigger: GCCATGGCTTACAGCCTGTCAGAGATGGAGGCGGCT...CGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR GCA 90 bp | ACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCCGCAACTGAAGGTTGCTaGTCACGACGGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLQPRQPPFPRRFCQPASATEGC*SRRLSS Trigger: GGAGCTGAGCCGTCGTGAGCAGCAACCTTCAGTTGC...GGATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCCATCCAGCAACTGAAGGTTGCTaGTCACGACGGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAKAASFPTQVLPARIHPATEGC*SRRLSS Trigger: GGAGCTGAGCCGTCGTGAGCAGCAACCTTCAGTTGC...TGGATGGATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR CCA 90 bp | ACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCCGTGATGCGGCGGCCTTaGACAAAGGTGGTGGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLQPRQPPFPRRFCQPASVMRRP*TKVVDV Trigger: TACGTCCACCACCTTTGTCCAAGGCCGCCGCATCAC...GGATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR GCA 90 bp | CTCAGAACACATCTCTGCCTAGTCCTGTGGCCAGGGCAGGCTGAGGCAGCAAGATGGGCTGCTGGCTTCTaGCCAGCCGCCTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRTHLCLVLWPGQAEAARWAAGF*PAASIS Trigger: AGAGATGGAGGCGGCTGGGCAGAAGCCAGCAGCCCA...TCTTGCTGCCTCAGCCTGCCCTGGCCACAGGACTAGGCAGAGATGTGTTCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| CDS-3UTR CCA 90 bp | ATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCGTGATGCGGCGGCCTTaGACAAAGGTGGTGGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: IHTPAKAASFPTQVLPARVMRRP*TKVVDV Trigger: TACGTCCACCACCTTTGTCCAAGGCCGCCGCATCAC...GCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR CCA 90 bp | CCAGGATATCCAGCTCAGAACACATCTCTGCCTAGTCCTGTGGCCAGGGCAGGCATCTTCCTGGGCTGCTaGCTTCTGCCCAGCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGYPAQNTSLPSPVARAGIFLGC*LLPSRL Trigger: GAGGCGGCTGGGCAGAAGCCAGCAGCCCAGGAAGAT...GCCTGCCCTGGCCACAGGACTAGGCAGAGATGTGTTCTGAGCTGGATATCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| 3UTR CAA 72 bp | TCGCTCGCTCGGCCTGCGCTGTGCCCTGGGAGAAAGTaGCCAACTCAAGTTCAGAGCATGCCAGGCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLARPALCPGRK*PTQVQSMPGQV Trigger: GACTTGGCCTGGCATGCTCTGAACTTGAGTTGGCAACTTTCTCCCAGGGCACAGCGCAGGCCGAGCGAGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| CDS-3UTR TCA 90 bp | CATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGTTCGGTACGCCTTCTTaGTGTCATCAGGGGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHSSQGSLLSHAGSASPFGTPS*CHQGTH Trigger: GTGCGTCCCCTGATGACATCAAGAAGGCGTACCGAA...CGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR TCA 90 bp | TTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGTCTTCGGCCGGACCTGCATaGCCCCCAGCCCAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FASVSPQSELSSSCFDGSSAGPA*PPAQGQ Trigger: TTGCCCCTGGGCTGGGGGTCATGCAGGTCCGGCCGA...AGACCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | ACTCTGTATCCAGGATATCCAGCTCAGAACACATCTCTGCCTAGTCCTGTGGCCTCGGCCGGACCTGCATaGCCCCCAGCCCAGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLYPGYPAQNTSLPSPVASAGPA*PPAQGQ Trigger: TTGCCCCTGGGCTGGGGGTCATGCAGGTCCGGCCGA...GGCCACAGGACTAGGCAGAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| CDS-3UTR CCA 90 bp | ACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATATCCGGGTTCTTGTCTaGGTGCCACTGCAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: THSSQGSLLSHAGSASPHIRVLV*VPLQSL Trigger: AAGGCTCTGCAGTGGCACCCAGACAAGAACCCGGAT...ATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR CCA 90 bp | CCATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCATCCGGGTTCTTGTCTaGGTGCCACTGCAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PYTLQPRQPPFPRRFCQPIRVLV*VPLQSL Trigger: AAGGCTCTGCAGTGGCACCCAGACAAGAACCCGGAT...GGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CCA 90 bp | CCATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCACAGGCTGTAAGCCATaGCGAGCTGCAGGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PYTLQPRQPPFPRRFCQPTGCKP*RAAGPH Trigger: ATGAGGACCTGCAGCTCGCCATGGCTTACAGCCTGT...GGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR GCA 90 bp | ACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATTTGTCTGGGTGCCACTaGAGAGCCTTCTTTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: THSSQGSLLSHAGSASPHLSGCH*RAFFRY Trigger: GTACCGAAAGAAGGCTCTGCAGTGGCACCCAGACAA...ATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CCA 90 bp | TCCCTCTGCATGCCAGTCCTTGCCATACACACTCCAGCCAAGGCAGCCTCCTTTGTGATGCGGCGGCCTTaGACAAAGGTGGTGGACGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLCMPVLAIHTPAKAASFVMRRP*TKVVDV Trigger: TACGTCCACCACCTTTGTCCAAGGCCGCCGCATCAC...AAAGGAGGCTGCCTTGGCTGGAGTGTGTATGGCAAGGACTGGCATGCAGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | CACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCCATCTGGGACACCATTaGTTGACACTGACTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTPAKAASFPTQVLPARIHLGHH*LTLTSV Trigger: AACTGAAGTCAGTGTCAATCAATGGTGTCCCAGATG...GATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR TCA 90 bp | CCCTCTGGGTCACCCTGGCCCTATCCCACCTCTCCAAGGATAGCCAGCCTCACCCATCTGGGACACCATTaGTTGACACTGACTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSGSPWPYPTSPRIASLTHLGHH*LTLTSV Trigger: AACTGAAGTCAGTGTCAATCAATGGTGTCCCAGATG...GGTGAGGCTGGCTATCCTTGGAGAGGTGGGATAGGGCCAGGGTGACCCAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | TATCCAGGATATCCAGCTCAGAACACATCTCTGCCTAGTCCTGTGGCCAGGGCAAGCCGCCTCCATCTCTaGCAGGCTGTAAGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YPGYPAQNTSLPSPVARASRLHL*QAVSHG Trigger: GCCATGGCTTACAGCCTGTCAGAGATGGAGGCGGCT...TGCCCTGGCCACAGGACTAGGCAGAGATGTGTTCTGAGCTGGATATCCTGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| 3UTR CAA 72 bp | GTTCTCCATGATTCTGCGTGTGGTGATGCGGCGGCCTaGGACAAAGGTGGTGGACGTAGAAACGGAGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLHDSACGDAAA*DKGGGRRNGAE Trigger: TTCCGCTCCGTTTCTACGTCCACCACCTTTGTCCAAGGCCGCCGCATCACCACACGCAGAATCATGGAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| CDS-3UTR GCA 90 bp | TGGCGAGCTGCAGGTCCTCATCCTCAGAAAGATCATGGTCAGGGGGACGAGAGATTGTCTGGGTGCCACTaGAGAGCCTTCTTTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WRAAGPHPQKDHGQGDERLSGCH*RAFFRY Trigger: GTACCGAAAGAAGGCTCTGCAGTGGCACCCAGACAA...TCTCTCGTCCCCCTGACCATGATCTTTCTGAGGATGAGGACCTGCAGCTCGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| CDS-3UTR GCA 90 bp | GGGCTCCCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGATCACACTCTTATGGGTaGCCCCCACGTCAAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLPRQEDRWLMEDELMIRSHSYG*PPRQGL Trigger: GAGACCTTGACGTGGGGGGCACCCATAAGAGTGTGA...TCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGGGAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| CDS-3UTR CCA 90 bp | GGGCTCCCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAACAGGCTGTAAGCCATaGCGAGCTGCAGGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLPRQEDRWLMEDELMIRTGCKP*RAAGPH Trigger: ATGAGGACCTGCAGCTCGCCATGGCTTACAGCCTGT...TCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGGGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR TCA 90 bp | GGGCTCCCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAGTCATCAAAGAGCTCTaGAAAAGGGTCTCCGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLPRQEDRWLMEDELMIRVIKEL*KRVSAP Trigger: GGGAGCGGAGACCCTTTTTCAGAGCTCTTTGATGAC...TCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGGGAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR TCA 90 bp | GCTTTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATCACCAGCCCCCGGGCTaGAGGAGAAAGATGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALFASVSPQSELSSSCFDHQPPG*RRKMRR Trigger: CCTCCTCATCTTTCTCCTTCAGCCCGGGGGCTGGTG...ATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR TCA 90 bp | TTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGAGCCGCCTCCATCTCTaGCAGGCTGTAAGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFASVSPQSELSSSCFDGSRLHL*QAVSHG Trigger: GCCATGGCTTACAGCCTGTCAGAGATGGAGGCGGCT...CCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR TCA 90 bp | CCAGGTTGCCCAAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTGCTCACAGCCGCCTCCATCTCTaGCAGGCTGTAAGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGCPRENKLSQMLQESAHSRLHL*QAVSHG Trigger: GCCATGGCTTACAGCCTGTCAGAGATGGAGGCGGCT...GTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTTGGGCAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR GCA 90 bp | TTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGTCTGCAACTGAAGGTTGCTaGTCACGACGGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FASVSPQSELSSSCFDGSATEGC*SRRLSS Trigger: GGAGCTGAGCCGTCGTGAGCAGCAACCTTCAGTTGC...AGACCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR GCA 90 bp | GCTTTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATCCACCTGCTGGCTTCTaGCCAGCCGCCTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALFASVSPQSELSSSCFDPPAGF*PAASIS Trigger: AGAGATGGAGGCGGCTGGGCAGAAGCCAGCAGGTGG...ATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| CDS-3UTR CCA 90 bp | GAACTGCAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTCTGCCTAGCCCCAGCATCTTCCTaGGCTGCTGGCTTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELQQLCIQDIQLRTHLCLAPASS*AAGFCP Trigger: TGGGCAGAAGCCAGCAGCCCAGGAAGATGCTGGGGC...TAGGCAGAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGCAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| CDS-3UTR TCA 90 bp | GCAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTGCTGGCTTCTGCTTCGGTACGCCTTCTTaGTGTCATCAGGGGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AATLYPGYPAQNTSAGFCFGTPS*CHQGTH Trigger: GTGCGTCCCCTGATGACATCAAGAAGGCGTACCGAA...GCAGAAGCCAGCAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| CDS-3UTR GCA 90 bp | GCACAAAAGGCCCACCCCAAACCCACTAGTGTCCTTCAGCAGTGTCTGATCCAATTGTCTGGGTGCCACTaGAGAGCCTTCTTTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AQKAHPKPTSVLQQCLIQLSGCH*RAFFRY Trigger: GTACCGAAAGAAGGCTCTGCAGTGGCACCCAGACAA...TTGGATCAGACACTGCTGAAGGACACTAGTGGGTTTGGGGTGGGCCTTTTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| CDS-3UTR GCA 90 bp | ACCTATCAGCCCTGGACAGAGTACAACAGATCCCTGCCCATGCTACAGAACGGTACTTCTACCCGCTCCTaGCCGTTCTCCATGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TYQPWTEYNRSLPMLQNGTSTRS*PFSMIL Trigger: CAGAATCATGGAGAACGGGCAGGAGCGGGTAGAAGT...ACCGTTCTGTAGCATGGGCAGGGATCTGTTGTACTCTGTCCAGGGCTGATAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| CDS-3UTR GCA 90 bp | CTGCAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTCTGCCTAGTCGCAACTGAAGGTTGCTaGTCACGACGGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQQLCIQDIQLRTHLCLVATEGC*SRRLSS Trigger: GGAGCTGAGCCGTCGTGAGCAGCAACCTTCAGTTGC...GACTAGGCAGAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| CDS-3UTR CCA 90 bp | GTAGAAACGGAGCGGAAAGCACCAGCCCCCGGGCTGAAGGAGAAAGATGAGGAGTCAGAAAATGAAACTTaGGAGACGGCAGGGTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VETERKAPAPGLKEKDEESENET*ETAGYP Trigger: TGGATACCCTGCCGTCTCCCAAGTTTCATTTTCTGA...CTCCTCATCTTTCTCCTTCAGCCCGGGGGCTGGTGCTTTCCGCTCCGTTTCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| 3UTR CAA 72 bp | CCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTaGATGGGTCTCAAAGGCTCAGTGTTAACAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFPLSLSSAHLA*MGLKGSVLTEA Trigger: GGCCTCTGTTAACACTGAGCCTTTGAGACCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR TCA 90 bp | CCAGGTTGCCCAAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTGCTCACTTCGGTACGCCTTCTTaGTGTCATCAGGGGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGCPRENKLSQMLQESAHFGTPS*CHQGTH Trigger: GTGCGTCCCCTGATGACATCAAGAAGGCGTACCGAA...GTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTTGGGCAACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR TCA 90 bp | TTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGTTCGGTACGCCTTCTTaGTGTCATCAGGGGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFASVSPQSELSSSCFDGFGTPS*CHQGTH Trigger: GTGCGTCCCCTGATGACATCAAGAAGGCGTACCGAA...CCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR GCA 90 bp | TTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGTCTACTTCTACCCGCTCCTaGCCGTTCTCCATGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FASVSPQSELSSSCFDGSTSTRS*PFSMIL Trigger: CAGAATCATGGAGAACGGGCAGGAGCGGGTAGAAGT...AGACCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR CCA 90 bp | CCATTGATTGACACTGACTTCAGTTGTCCATCCTCTTCCACTTCTACCCGCTCCATCCGGGTTCTTGTCTaGGTGCCACTGCAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PLIDTDFSCPSSSTSTRSIRVLV*VPLQSL Trigger: AAGGCTCTGCAGTGGCACCCAGACAAGAACCCGGAT...GGAGCGGGTAGAAGTGGAAGAGGATGGACAACTGAAGTCAGTGTCAATCAATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
||
| CDS-3UTR CCA 90 bp | GGAACTGCAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTCTGCCTATCTTATGGACCCACTaGCCCCAGCATCTTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTAATLYPGYPAQNTSLPILWTH*PQHLPG Trigger: CCCAGGAAGATGCTGGGGCCAGTGGGTCCATAAGAT...AGGCAGAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGCAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTGATGGGTCTCAAAGGCTCAGTGTTAACAGAGGCCGGCCATAGCCTGCTCCATCTGGGACACCATTaGTTGACACTGACTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALMGLKGSVLTEAGHSLLHLGHH*LTLTSV Trigger: AACTGAAGTCAGTGTCAATCAATGGTGTCCCAGATG...GAGCAGGCTATGGCCGGCCTCTGTTAACACTGAGCCTTTGAGACCCATCAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR GCA 90 bp | CCAGGTTGCCCAAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTGCTCACTTGTCTGGGTGCCACTaGAGAGCCTTCTTTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGCPRENKLSQMLQESAHLSGCH*RAFFRY Trigger: GTACCGAAAGAAGGCTCTGCAGTGGCACCCAGACAA...GTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTTGGGCAACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR GCA 90 bp | CCAGGTTGCCCAAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTGCTCACACTTCTACCCGCTCCTaGCCGTTCTCCATGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGCPRENKLSQMLQESAHTSTRS*PFSMIL Trigger: CAGAATCATGGAGAACGGGCAGGAGCGGGTAGAAGT...GTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTTGGGCAACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAAAGAATATCCGGGTTCTTGTCTaGGTGCCACTGCAGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRQEDRWLMEDELMIRKNIRVLV*VPLQSL Trigger: AAGGCTCTGCAGTGGCACCCAGACAAGAACCCGGAT...ATTCTTTCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
||
| CDS-3UTR CCA 90 bp | AAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTGCTCACTTCAACCCGAGGTGATGCGGCGGCCTTaGACAAAGGTGGTGGACGTA | + |
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Preference number: 4 (lower is better) Translates to: KGKQTLSDATGICSLQPEVMRRP*TKVVDV Trigger: TACGTCCACCACCTTTGTCCAAGGCCGCCGCATCAC...CTCGGGTTGAAGTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CCA 90 bp | GCTTTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATACAGGCTGTAAGCCATaGCGAGCTGCAGGTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: ALFASVSPQSELSSSCFDTGCKP*RAAGPH Trigger: ATGAGGACCTGCAGCTCGCCATGGCTTACAGCCTGT...ATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CCA 90 bp | GAACTGCAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTCTGCCTAACAGGCTGTAAGCCATaGCGAGCTGCAGGTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: ELQQLCIQDIQLRTHLCLTGCKP*RAAGPH Trigger: ATGAGGACCTGCAGCTCGCCATGGCTTACAGCCTGT...TAGGCAGAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGCAGTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| CDS-3UTR CCA 90 bp | ACTGCAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTCTGCCTAGTCCCCAGAAGATCTTATaGACCCACTGGCCCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: TAATLYPGYPAQNTSLPSPQKIL*THWPQH Trigger: ATGCTGGGGCCAGTGGGTCCATAAGATCTTCTGGGG...ACTAGGCAGAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAAAGAATACTTCTACCCGCTCCTaGCCGTTCTCCATGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: PRQEDRWLMEDELMIRKNTSTRS*PFSMIL Trigger: CAGAATCATGGAGAACGGGCAGGAGCGGGTAGAAGT...ATTCTTTCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CCA 90 bp | AAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTGCTCACTTCAACCCGAGATCCGGGTTCTTGTCTaGGTGCCACTGCAGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KGKQTLSDATGICSLQPEIRVLV*VPLQSL Trigger: AAGGCTCTGCAGTGGCACCCAGACAAGAACCCGGAT...CTCGGGTTGAAGTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CCA 90 bp | GCAGCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTGCTGGCTTCTGCCATGGTTTCAGCAGCTaGCTCATCTCTATGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: AATLYPGYPAQNTSAGFCHGFSS*LISMTD Trigger: GTCTGTCATAGAGATGAGCCAGCTGCTGAAACCATG...GCAGAAGCCAGCAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| CDS-3UTR GCA 90 bp | TTGTGCTCTAGAAGAAGAGACCTGGTCATTCCTCCCTTTAGGAAAGTTATCGCCGGGTTCTTGTCTGGGTaGCACTGCAGAGCCTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LCSRRRDLVIPPFRKVIAGFLSG*HCRAFF Trigger: AAAGAAGGCTCTGCAGTGGCACCCAGACAAGAACCC...GGCGATAACTTTCCTAAAGGGAGGAATGACCAGGTCTCTTCTTCTAGAGCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| CDS-3UTR TCA 90 bp | GCAACTCTGTATCCAGGATATCCAGCTCAGAACACATCTCTGCCTAGTCCTGTGCATCTGGGACACCATTaGTTGACACTGACTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: ATLYPGYPAQNTSLPSPVHLGHH*LTLTSV Trigger: AACTGAAGTCAGTGTCAATCAATGGTGTCCCAGATG...CACAGGACTAGGCAGAGATGTGTTCTGAGCTGGATATCCTGGATACAGAGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| CDS-3UTR CCA 90 bp | CCAGGTTGCCCAAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTGCTCACAGGAGAAATCGGAGTTaGCAGGAAAGGAAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PGCPRENKLSQMLQESAHRRNRS*QERKKR Trigger: TCTCTTCTTCCTTTCCTGCCAACTCCGATTTCTCCT...GTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTTGGGCAACCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CCA 90 bp | TTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGAGGAGAAATCGGAGTTaGCAGGAAAGGAAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: LFASVSPQSELSSSCFDGRRNRS*QERKKR Trigger: TCTCTTCTTCCTTTCCTGCCAACTCCGATTTCTCCT...CCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR TCA 90 bp | CCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAAAGAATCATCTGGGACACCATTaGTTGACACTGACTTCAGTT | + |
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Preference number: 4 (lower is better) Translates to: PRQEDRWLMEDELMIRKNHLGHH*LTLTSV Trigger: AACTGAAGTCAGTGTCAATCAATGGTGTCCCAGATG...ATTCTTTCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CCA 90 bp | CCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAAAGAATAGGAGAAATCGGAGTTaGCAGGAAAGGAAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PRQEDRWLMEDELMIRKNRRNRS*QERKKR Trigger: TCTCTTCTTCCTTTCCTGCCAACTCCGATTTCTCCT...ATTCTTTCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | CCATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGGTGATGCGGCGGCCTaGGACAAAGGTGGTGGACGT | + |
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Preference number: 5 (lower is better) Translates to: PYTLQPRQPPFPRRFCQPGDAAA*DKGGGR Trigger: ACGTCCACCACCTTTGTCCAAGGCCGCCGCATCACC...GGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTATGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | ATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCGGTGATGCGGCGGCCTaGGACAAAGGTGGTGGACGT | + |
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Preference number: 5 (lower is better) Translates to: IHTPAKAASFPTQVLPARGDAAA*DKGGGR Trigger: ACGTCCACCACCTTTGTCCAAGGCCGCCGCATCACC...GCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS TCA 90 bp | AGCATCTTCCTGGGCTGCTGGCTTCTGCCCAGCCGCCTCCATCTCTaGCAGGCTGTAAGCCATGGCGAGCTGCAGGTCCTCATCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: SIFLGCWLLPSRLHL*QAVSHGELQVLILR Trigger: TCTGAGGATGAGGACCTGCAGCTCGCCATGGCTTACAGCCTGTCAGAGATGGAGGCGGCTGGGCAGAAGCCAGCAGCCCAGGAAGATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190445.2 |
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| CDS-3UTR CAA 90 bp | CCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCCATCCATTTCGGTACGCCTTCTaGATGTCATCAGGGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: PAKAASFPTQVLPARIHPFRYAF*MSSGDA Trigger: TGCGTCCCCTGATGACATCAAGAAGGCGTACCGAAA...TGGATGGATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | ACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCCTTTCGGTACGCCTTCTaGATGTCATCAGGGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: TLQPRQPPFPRRFCQPASFRYAF*MSSGDA Trigger: TGCGTCCCCTGATGACATCAAGAAGGCGTACCGAAA...GGATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | CGGCGGCCTTGGACAAAGGTGGTGGACGTAGAAACGGAGCGGAAAGCACCAGCCTTTCGGTACGCCTTCTaGATGTCATCAGGGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: RRPWTKVVDVETERKAPAFRYAF*MSSGDA Trigger: TGCGTCCCCTGATGACATCAAGAAGGCGTACCGAAA...GGCTGGTGCTTTCCGCTCCGTTTCTACGTCCACCACCTTTGTCCAAGGCCGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| CDS-3UTR CAA 90 bp | CACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCATCTTATTATCCGGGTTCTaGTCTGGGTGCCACTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: HTPAKAASFPTQVLPARILLSGF*SGCHCR Trigger: TCTGCAGTGGCACCCAGACAAGAACCCGGATAATAA...GATGCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | CCCTCTGGGTCACCCTGGCCCTATCCCACCTCTCCAAGGATAGCCAGCCTCACCTTATTATCCGGGTTCTaGTCTGGGTGCCACTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PSGSPWPYPTSPRIASLTLLSGF*SGCHCR Trigger: TCTGCAGTGGCACCCAGACAAGAACCCGGATAATAA...GGTGAGGCTGGCTATCCTTGGAGAGGTGGGATAGGGCCAGGGTGACCCAGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | CCTTGGACAAAGGTGGTGGACGTAGAAACGGAGCGGAAAGCACCAGCCCCCGGGTTATTATCCGGGTTCTaGTCTGGGTGCCACTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PWTKVVDVETERKAPAPGLLSGF*SGCHCR Trigger: TCTGCAGTGGCACCCAGACAAGAACCCGGATAATAA...CCCGGGGGCTGGTGCTTTCCGCTCCGTTTCTACGTCCACCACCTTTGTCCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185403.7 |
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| CDS-3UTR CAA 90 bp | ATACACACTCCAGCCAAGGCAGCCTCCTTTCCCACGCAGGTTCTGCCAGCCCGCTTATTATCCGGGTTCTaGTCTGGGTGCCACTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: IHTPAKAASFPTQVLPARLLSGF*SGCHCR Trigger: TCTGCAGTGGCACCCAGACAAGAACCCGGATAATAA...GCGGGCTGGCAGAACCTGCGTGGGAAAGGAGGCTGCCTTGGCTGGAGTGTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | CCCAGGCAGGAGGACAGGTGGCTCATGGAGGATGAATTGATGATAAGAAAGAATGGTGATGCGGCGGCCTaGGACAAAGGTGGTGGACGT | + |
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Preference number: 5 (lower is better) Translates to: PRQEDRWLMEDELMIRKNGDAAA*DKGGGR Trigger: ACGTCCACCACCTTTGTCCAAGGCCGCCGCATCACC...ATTCTTTCTTATCATCAATTCATCCTCCATGAGCCACCTGTCCTCCTGCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | GCTTTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGTGATGCGGCGGCCTaGGACAAAGGTGGTGGACGT | + |
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Preference number: 5 (lower is better) Translates to: ALFASVSPQSELSSSCFDGDAAA*DKGGGR Trigger: ACGTCCACCACCTTTGTCCAAGGCCGCCGCATCACC...ATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | TTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGTTTCGGTACGCCTTCTaGATGTCATCAGGGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: LFASVSPQSELSSSCFDGFRYAF*MSSGDA Trigger: TGCGTCCCCTGATGACATCAAGAAGGCGTACCGAAA...CCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | CCAGGTTGCCCAAGGGAAAACAAACTCTCTCAGATGCTACAGGAATCTGCTCACTTTCGGTACGCCTTCTaGATGTCATCAGGGGACGCA | + |
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Preference number: 5 (lower is better) Translates to: PGCPRENKLSQMLQESAHFRYAF*MSSGDA Trigger: TGCGTCCCCTGATGACATCAAGAAGGCGTACCGAAA...GTGAGCAGATTCCTGTAGCATCTGAGAGAGTTTGTTTTCCCTTGGGCAACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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| CDS-3UTR CAA 90 bp | TTATTTGCCTCCGTTTCCCCTCAGTCTGAGCTCAGCTCATCTTGCTTTGATGGGTTATTATCCGGGTTCTaGTCTGGGTGCCACTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: LFASVSPQSELSSSCFDGLLSGF*SGCHCR Trigger: TCTGCAGTGGCACCCAGACAAGAACCCGGATAATAA...CCCATCAAAGCAAGATGAGCTGAGCTCAGACTGAGGGGAAACGGAGGCAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000187058.7 ENSMUST00000188290.7 ENSMUST00000188346.7 ENSMUST00000188931.7 |
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