Pregenerated sensors for DNAJB14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074212Ensembl transcript IDs: ENSMUST00000090178.10, ENSMUST00000197711.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAACTAATGCCTGCAAGGTGTTCTCTGACCTCTACATGTGCTTCATaGCACATGCACGCGCGCGCGCGCGCGCACACGCACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: ELMPARCSLTSTCAS*HMHARARAHTHTHT Trigger: TGTGTGTGTGTGCGTGTGCGCGCGCGCGCGCGCGTGCATGTGCCATGAAGCACATGTAGAGGTCAGAGAACACCTTGCAGGCATTAGTTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR GCA 90 bp | CTCCCTTGGTCTCCCGCGTGTTGGGACTACATGTATGAGCTGCCATaGCTGACTGATATTTGCCATGGATACCTGGATGGGAGAGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LPWSPACWDYMYELP*LTDICHGYLDGRGG Trigger: CCCACCTCTCCCATCCAGGTATCCATGGCAAATATCAGTCAGGCATGGCAGCTCATACATGTAGTCCCAACACGCGGGAGACCAAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR CCA 90 bp | GTGGAGAGGACCCCAGCCATCCCGGCTGCGGATGAAGGGAAACCATaGAGAGTTGCCGAGTTGAAGCAGACTGTACAAAGCAGCATTCTT | + |
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Preference number: 1 (lower is better) Translates to: VERTPAIPAADEGKP*RVAELKQTVQSSIL Trigger: AAGAATGCTGCTTTGTACAGTCTGCTTCAACTCGGCAACTCTCCATGGTTTCCCTTCATCCGCAGCCGGGATGGCTGGGGTCCTCTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR CCA 90 bp | CCACAGTCATCAGCCTTTGTGACTCTGCACAAGGTCTCTATAAGATaGAGCCTGTCCACATCCTGCCCTGAACGGGAAGGGGCTCATGAG | + |
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Preference number: 1 (lower is better) Translates to: PQSSAFVTLHKVSIR*SLSTSCPEREGAHE Trigger: CTCATGAGCCCCTTCCCGTTCAGGGCAGGATGTGGACAGGCTCCATCTTATAGAGACCTTGTGCAGAGTCACAAAGGCTGATGACTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR TCA 90 bp | CTTGTGAAAGCACACAACAGAACCTGTGCTAGAGGCAGCCAAAAGTaGCAGACACCGTGGAGAGGAAGGAAGTCCCTGCTGTGGAACGTG | + |
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Preference number: 1 (lower is better) Translates to: LVKAHNRTCARGSQK*QTPWRGRKSLLWNV Trigger: CACGTTCCACAGCAGGGACTTCCTTCCTCTCCACGGTGTCTGTCACTTTTGGCTGCCTCTAGCACAGGTTCTGTTGTGTGCTTTCACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR TCA 90 bp | CTTGGTCTCCCGCGTGTTGGGACTACATGTATGAGCTGCCATGCCTaGCTGATATTTGCCATGGATACCTGGATGGGAGAGGTGGGAATG | + |
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Preference number: 1 (lower is better) Translates to: LGLPRVGTTCMSCHA*LIFAMDTWMGEVGM Trigger: CATTCCCACCTCTCCCATCCAGGTATCCATGGCAAATATCAGTCAGGCATGGCAGCTCATACATGTAGTCCCAACACGCGGGAGACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR CCA 90 bp | GAAGGGGCTCATGAGCCCTCTCCCCCAGCCCTCCCTGATGATCTATaGCAGTTAGTGGTTGATGAGAGGAGATACACTTTCTTCAGGGTT | + |
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Preference number: 1 (lower is better) Translates to: EGAHEPSPPALPDDL*QLVVDERRYTFFRV Trigger: AACCCTGAAGAAAGTGTATCTCCTCTCATCAACCACTAACTGCCATAGATCATCAGGGAGGGCTGGGGGAGAGGGCTCATGAGCCCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR TCA 90 bp | ATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: ISLQMVVSHHVVAGI*TLDLRKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR CCA 90 bp | CTAGCCTCAAATCCATGTGTCTGCCTCCCTTGGTCTCCCGCGTGTTaGGACTACATGTATGAGCTGCCATGCCTGACTGATATTTGCCAT | + |
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Preference number: 1 (lower is better) Translates to: LASNPCVCLPWSPAC*DYMYELPCLTDICH Trigger: ATGGCAAATATCAGTCAGGCATGGCAGCTCATACATGTAGTCCCAACACGCGGGAGACCAAGGGAGGCAGACACATGGATTTGAGGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR CCA 90 bp | GAATCAGATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ESDLVTDGCEPPCGC*DLNSGPSEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATCTGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR TCA 90 bp | ACTAAGCAGCACTGCTTTAGGCTAACGGTTAGACAGGAAGTTTGCTaGAGGAAGCACAACAGATCAGAAGGCTCTGAGAATGAGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: TKQHCFRLTVRQEVC*RKHNRSEGSENEAR Trigger: CCTGGCCTCATTCTCAGAGCCTTCTGATCTGTTGTGCTTCCTTCAGCAAACTTCCTGTCTAACCGTTAGCCTAAAGCAGTGCTGCTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR TCA 90 bp | AAAGTCTGTCTGAAGTTAGAAGCCACACAGCAATCTGCGGGGTGGTaGGATGGCTCAGTGGTAAAACACTTCCTGCGTAAGTCTGACAAC | + |
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Preference number: 1 (lower is better) Translates to: KVCLKLEATQQSAGW*DGSVVKHFLRKSDN Trigger: GTTGTCAGACTTACGCAGGAAGTGTTTTACCACTGAGCCATCTCACCACCCCGCAGATTGCTGTGTGGCTTCTAACTTCAGACAGACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR GCA 90 bp | TGGTTGCTGGGATTTGAACTTTGGACCTTCGGAAGAGCAGTCGGGTaGTCTTACCCACTGAGCCATCTCACCAGCCCTGTTTATTTAATT | + |
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Preference number: 1 (lower is better) Translates to: WLLGFELWTFGRAVG*SYPLSHLTSPVYLI Trigger: AATTAAATAAACAGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGCAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR TCA 90 bp | ACACCGTGGAGAGGAAGGAAGTCCCTGCTGTGGAACGTGGTCCTTTaGAGTTATTCCTCTCAAGATTCTACTTTAGGGAGTAACAAAAAT | + |
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Preference number: 1 (lower is better) Translates to: TPWRGRKSLLWNVVL*SYSSQDSTLGSNKN Trigger: ATTTTTGTTACTCCCTAAAGTAGAATCTTGAGAGGAATAACTTCAAAGGACCACGTTCCACAGCAGGGACTTCCTTCCTCTCCACGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR TCA 90 bp | CTCAGCTTAGTCTTTAATCAAATCTTCTTCAGCTTCATGGCGACATaGAATTTACAGAGAAGACAGAGTACACAGAAAGGAGCAGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LSLVFNQIFFSFMAT*NLQRRQSTQKGAGG Trigger: CCCACCTGCTCCTTTCTGTGTACTCTGTCTTCTCTGTAAATTTCATGTCGCCATGAAGCTGAAGAAGATTTGATTAAAGACTAAGCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR TCA 90 bp | ATACTAGGAGAAGCTCCAAGCCTCATCATCTTGTACCAGGGAACATaGTCAGCAGGTGACGAAGATACAAACAAATCAAAAGAAGAATAC | + |
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Preference number: 1 (lower is better) Translates to: ILGEAPSLIILYQGT*SAGDEDTNKSKEEY Trigger: GTATTCTTCTTTTGATTTGTTTGTATCTTCGTCACCTGCTGATCATGTTCCCTGGTACAAGATGATGAGGCTTGGAGCTTCTCCTAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR CCA 90 bp | ATTAAAAACAGACACAGCGAACTACTTGAAGGAAAAGAGGGAAAGTaGGAAATGAGGCCAGTGCACATCAACACTATCAAATGTAAACCG | + |
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Preference number: 1 (lower is better) Translates to: IKNRHSELLEGKEGK*EMRPVHINTIKCKP Trigger: CGGTTTACATTTGATAGTGTTGATGTGCACTGGCCTCATTTCCCACTTTCCCTCTTTTCCTTCAAGTAGTTCGCTGTGTCTGTTTTTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR CCA 90 bp | AGACATTCATTCCTCTTTAACCATGTTGTCCTTTGTTTAAATACTTaGATAATTGAGATGATGGCTCATTTGGCTTTCTGGTCAACCAAG | + |
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Preference number: 1 (lower is better) Translates to: RHSFLFNHVVLCLNT*IIEMMAHLAFWSTK Trigger: CTTGGTTGACCAGAAAGCCAAATGAGCCATCATCTCAATTATCCAAGTATTTAAACAAAGGACAACATGGTTAAAGAGGAATGAATGTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR CAA 90 bp | GAGGGCAAGCCAATCGCTGTGAGATCCAGGCCAGCCAGGTCTCCATaGAGAGTTGGAGCCAGCCAGAGCTACACAGTGAGACCCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: EGKPIAVRSRPARSP*RVGASQSYTVRPWT Trigger: AGTCCAGGGTCTCACTGTGTAGCTCTGGCTGGCTCCAACTCTCAATGGAGACCTGGCTGGCCTGGATCTCACAGCGATTGGCTTGCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR CAA 90 bp | GATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
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Preference number: 2 (lower is better) Translates to: DLVTDGCEPPCGCWD*NSGPSEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR CCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAGAAGAGCTAAGCCAGTaGAGAGGACCCCAGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTEELSQ*RGPQPS Trigger: GGATGGCTGGGGTCCTCTCCACTGGCTTAGCTCTTC...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR CCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACATGCACAGGGCTACTGTaGCCCAACACACCATGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTCTGLL*PNTPCC Trigger: ACAGCATGGTGTGTTGGGCCACAGTAGCCCTGTGCA...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACATTCCAGAAGGATGGTTaGGTTCTCCAGACCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTFQKDG*VLQTPR Trigger: CCTTGGGGTCTGGAGAACTCAACCATCCTTCTGGAA...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAAGCCCTCCACCCTTGTaGAAGCACACAACAGAACCT | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTSPPPL*KHTTEP Trigger: AGGTTCTGTTGTGTGCTTTCACAAGGGTGGAGGGCT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAAGGGAAAGTGGGAAATaGGGCCAGTGCACATCAACA | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTRESGK*GQCTST Trigger: TGTTGATGTGCACTGGCCTCATTTCCCACTTTCCCT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | CCATTGAGAGTTGGAGCCAGCCAGAGCTACACAGTGAGACCCTGGACTCAATATTGGAACGTGGTCCTTTaGAGTTATTCCTCTCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PLRVGASQSYTVRPWTQYWNVVL*SYSSQD Trigger: ATCTTGAGAGGAATAACTTCAAAGGACCACGTTCCA...ATATTGAGTCCAGGGTCTCACTGTGTAGCTCTGGCTGGCTCCAACTCTCAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAAATTGCAGGAATGGCTaGGCAACTGAATCGCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTNCRNG*ATESQN Trigger: GTTCTGCGATTCAGTTGCTCAGCCATTCCTGCAATT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAATGAGCTGCCATGCCTaGCTGATATTTGCCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTMSCHA*LIFAMD Trigger: ATCCATGGCAAATATCAGTCAGGCATGGCAGCTCAT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR GCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACATGCCTGACTGATATTTaGCATGGATACCTGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTCLTDI*HGYLDG Trigger: CCCATCCAGGTATCCATGGCAAATATCAGTCAGGCA...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR CCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAGATGAAGGGAAACCATaGAGAGTTGCCGAGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTDEGKP*RVAELK Trigger: CTTCAACTCGGCAACTCTCCATGGTTTCCCTTCATC...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAAGACAGGAAGTTTGCTaGAGGAAGCACAACAGATCA | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTRQEVC*RKHNRS Trigger: TGATCTGTTGTGCTTCCTTCAGCAAACTTCCTGTCT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAAACCTTGAGGTTAAATaGCCTGGGTTAAAGGCCATG | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTNLEVK*PGLKAM Trigger: CATGGCCTTTAACCCAGGTCATTTAACCTCAAGGTT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAACATTCCTGTTCTTGTaGAGACCTGACCTGACACAA | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTTFLFL*RPDLTQ Trigger: TTGTGTCAGGTCAGGTCTTCACAAGAACAGGAATGT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR GCA 90 bp | GAACATGATCAGCAGGTGACGAAGATACAAACAAATCAAAAGAAGAATACTGGCCTGCTGCTCTATCTCTaGACAGGGCTACTGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: EHDQQVTKIQTNQKKNTGLLLYL*TGLLWP Trigger: GGGCCACAGTAGCCCTGTGCAGAGATAGAGCAGCAG...GCCAGTATTCTTCTTTTGATTTGTTTGTATCTTCGTCACCTGCTGATCATGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAAGAAGAATACTGGCTTaGTGGGATTCAGAAATCTGC | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTRRILA*WDSEIC Trigger: GCAGATTTCTGAATCCCATCAAGCCAGTATTCTTCT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTCAATCTGCGGGGTGGTaGGATGGCTCAGTGGTAAAA | + |
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Preference number: 2 (lower is better) Translates to: FGFLVNQETFHCLKSGSCQSAGW*DGSVVK Trigger: TTTTACCACTGAGCCATCTCACCACCCCGCAGATTG...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTTGGCCCAACACACCATaGTGTGAAGTAAGCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: FGFLVNQETFHCLKSGSCWPNTP*CEVSQL Trigger: CAGCTGGCTTACTTCACAGCATGGTGTGTTGGGCCA...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR GCA 90 bp | GAACATGATCAGCAGGTGACGAAGATACAAACAAATCAAAAGAAGAATACTGGCCACTGCTCTAGCTGCTaGTCTATCTCTGCACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: EHDQQVTKIQTNQKKNTGHCSSC*SISAQG Trigger: GCCCTGTGCAGAGATAGAGCAGCAGCTAGAGCAGTG...GCCAGTATTCTTCTTTTGATTTGTTTGTATCTTCGTCACCTGCTGATCATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAAGAAGAGCAAAGGACTTAGGTGAGCAAGAAACTGGAGAATTTAGTTGCGTCTCCATTGAGAGTTaGAGCCAGCCAGAGCTACAC | + |
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Preference number: 2 (lower is better) Translates to: LRRRAKDLGEQETGEFSCVSIES*SQPELH Trigger: GTGTAGCTCTGGCTGGCTCCAACTCTCAATGGAGAC...GCAACTAAATTCTCCAGTTTCTTGCTCACCTAAGTCCTTTGCTCTTCTTCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | GGCTCAGTGGTAAAACACTTCCTGCGTAAGTCTGACAACTTGAGTTCAATCCACAGCTTCATGGCGACATaGAATTTACAGAGAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: GSVVKHFLRKSDNLSSIHSFMAT*NLQRRQ Trigger: CTGTCTTCTCTGTAAATTTCATGTCGCCATGAAGCT...GTGGATTGAACTCAAGTTGTCAGACTTACGCAGGAAGTGTTTTACCACTGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAGTTTACAACCCGTACTaGCAAAACAGTACAGAGATT | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTVYNPY*QNSTEI Trigger: AATCTCTGTACTGTTTTGTCAGTACGGGTTGTAAAC...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR GCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAATCTGACCTCTACATGTaGTTCATGGCACATGCACGC | + |
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Preference number: 2 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKSDLYM*FMAHAR Trigger: GCGTGCATGTGCCATGAAGCACATGTAGAGGTCAGA...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR GCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAAACTGTTTCCTGGCCATaGCACAGTCATCAGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKTVSWP*HSHQPL Trigger: CAAAGGCTGATGACTGTGGCATGGCCAGGAAACAGT...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTGGAAAAGAGGGAAAGTaGGAAATGAGGCCAGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: FGFLVNQETFHCLKSGSCGKEGK*EMRPVH Trigger: GTGCACTGGCCTCATTTCCCACTTTCCCTCTTTTCC...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR GCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAGAGGAGACAGAACTTTaGAACTTCAAATCTCCATTA | + |
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Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTEETEL*NFKSPL Trigger: TAATGGAGATTTGAAGTTGCAAAGTTCTGTCTCCTC...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| 3UTR-3UTR CCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACATCTTCTTCAGCTTCATaGCGACATGAAATTTACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTSSSAS*RHEIYR Trigger: TCTGTAAATTTCATGTCGCCATGAAGCTGAAGAAGA...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGAAGAAGAGCAAAGGACTTAGGTGAGCAAGAAACTGGAGAATTTAGTTGCATGTTTCCAGAAGGATaGTTGAGTTCTCCAGACCCC | + |
|
Preference number: 2 (lower is better) Translates to: LRRRAKDLGEQETGEFSCMFPEG*LSSPDP Trigger: GGGGTCTGGAGAACTCAACCATCCTTCTGGAAACAT...GCAACTAAATTCTCCAGTTTCTTGCTCACCTAAGTCCTTTGCTCTTCTTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGAAGAAGAGCAAAGGACTTAGGTGAGCAAGAAACTGGAGAATTTAGTTGCAAGTGGACAGTGAAATaGCAGTTGAGGGAGGAGATT | + |
|
Preference number: 2 (lower is better) Translates to: LRRRAKDLGEQETGEFSCKWTVK*QLREEI Trigger: AATCTCCTCCCTCAACTGTCATTTCACTGTCCACTT...GCAACTAAATTCTCCAGTTTCTTGCTCACCTAAGTCCTTTGCTCTTCTTCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR TCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAAACACAGCGAACTACTTaGAGGAAAAGAGGGAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKTQRTT*RKRGKV Trigger: CACTTTCCCTCTTTTCCTTCAAGTAGTTCGCTGTGT...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTAGCCAACATCTCTCATaGCTACTCCCAAGTACTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FGFLVNQETFHCLKSGSCSQHLS*LLPSTV Trigger: AACAGTACTTGGGAGTAGCCATGAGAGATGTTGGCT...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAGTGGAGGTTGTTGTCTaGTTATTCTTTTACTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LNARGSSPSPAALHSKYTVEVVV*LFFYFQ Trigger: TTGAAAGTAAAAGAATAACCAGACAACAACCTCCAC...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CAA 90 bp | TTTGCCATGGATACCTGGATGGGAGAGGTGGGAATGTGGAGGTTGTaGTCTGGTTATTCTTTTACTTTCAATGGTTTACAGAGAATTGTA | + |
|
Preference number: 2 (lower is better) Translates to: FAMDTWMGEVGMWRL*SGYSFTFNGLQRIV Trigger: TACAATTCTCTGTAAACCATTGAAAGTAAAAGAATAACCAGACAACAACCTCCACATTCCCACCTCTCCCATCCAGGTATCCATGGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR TCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAAACAACAAAGATACCATaGGCACACACTAAAACCACC | + |
|
Preference number: 2 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKTTKIP*AHTKTT Trigger: GGTGGTTTTAGTGTGTGCTCATGGTATCTTTGTTGT...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR TCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAAAGCAAAGGACTTAGGTaGGCAAGAAACTGGAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKSKGLR*ARNWRI Trigger: AATTCTCCAGTTTCTTGCTCACCTAAGTCCTTTGCT...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR TCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAACATAGTAAGAAGACATaGCCACTAAGTGCTCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKHSKKT*PLSAQS Trigger: AGACTGAGCACTTAGTGGTCATGTCTTCTTACTATG...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTTTTCTACACGTTTTCTaGCAGCTAAGAGCCTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: FGFLVNQETFHCLKSGSCFLHVF*QLRAFT Trigger: TGTGAAGGCTCTTAGCTGTCAGAAAACGTGTAGAAA...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTCAGGAAGAAGGGAAATaGAAGGAGATGATGTGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: FGFLVNQETFHCLKSGSCQEEGK*KEMMCY Trigger: ATAGCACATCATCTCCTTTCATTTCCCTTCTTCCTG...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CAA 90 bp | ATATTTGCCATGGATACCTGGATGGGAGAGGTGGGAATGTGGAGGTaGTTGTCTGGTTATTCTTTTACTTTCAATGGTTTACAGAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: IFAMDTWMGEVGMWR*LSGYSFTFNGLQRI Trigger: AATTCTCTGTAAACCATTGAAAGTAAAAGAATAACCAGACAACAACCTCCACATTCCCACCTCTCCCATCCAGGTATCCATGGCAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTTTACATCAAACTCAATaGGCAGCAAAGCTTCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: FGFLVNQETFHCLKSGSCLHQTQ*AAKLQV Trigger: GACTTGAAGCTTTGCTGCTCATTGAGTTTGATGTAA...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR GCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAATGGGATTCAGAAATCTaGAAAGTGGACAGTGAAATG | + |
|
Preference number: 2 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKWDSEI*KVDSEM Trigger: CATTTCACTGTCCACTTTGCAGATTTCTGAATCCCA...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAATACTGGAATTGTGAATaGCATCACTGCAACTTACCA | + |
|
Preference number: 2 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKYWNCE*HHCNLP Trigger: TGGTAAGTTGCAGTGATGCCATTCACAATTCCAGTA...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CCA 90 bp | GAACATGATCAGCAGGTGACGAAGATACAAACAAATCAAAAGAAGAATACTGGCAGAATCCATTTGCTTTaGGGTCCTGCTTCAGTTATC | + |
|
Preference number: 2 (lower is better) Translates to: EHDQQVTKIQTNQKKNTGRIHLL*GPASVI Trigger: GATAACTGAAGCAGGACCCCAAAGCAAATGGATTCT...GCCAGTATTCTTCTTTTGATTTGTTTGTATCTTCGTCACCTGCTGATCATGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGAAGAAGAGCAAAGGACTTAGGTGAGCAAGAAACTGGAGAATTTAGTTGCATGAGATCCACGATCTaGATGGCAAATAGAAACTTA | + |
|
Preference number: 2 (lower is better) Translates to: LRRRAKDLGEQETGEFSCMRSTI*MANRNL Trigger: TAAGTTTCTATTTGCCATTCAGATCGTGGATCTCAT...GCAACTAAATTCTCCAGTTTCTTGCTCACCTAAGTCCTTTGCTCTTCTTCTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGAAGAAGAGCAAAGGACTTAGGTGAGCAAGAAACTGGAGAATTTAGTTGCTGTGAATGGCATCACTaGAACTTACCATTGAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: LRRRAKDLGEQETGEFSCCEWHH*NLPLKT Trigger: AGTTTTCAATGGTAAGTTGCAGTGATGCCATTCACA...GCAACTAAATTCTCCAGTTTCTTGCTCACCTAAGTCCTTTGCTCTTCTTCTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAAGATCCACGATCTGAATaGCAAATAGAAACTTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKDPRSE*QIETYV Trigger: CACATAAGTTTCTATTTGCCATTCAGATCGTGGATC...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAATCAAAAGAAGAATACTaGCTTGATGGGATTCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKSKEEY*LDGIQK Trigger: TTTCTGAATCCCATCAAGCCAGTATTCTTCTTTTGA...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CCA 72 bp | CCTGCAAGGTGTTCTCTGACCTCTACATGTGCTTCATaGCACATGCACGCGCGCGCGCGCGCGCACACGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PARCSLTSTCAS*HMHARARAHTH Trigger: GTGCGTGTGCGCGCGCGCGCGCGCGTGCATGTGCCATGAAGCACATGTAGAGGTCAGAGAACACCTTGCAGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | GCCAGTGGAGAGGACCCCAGCCATCCCGGCTGCGGATaGAGGGAAACCATGGAGAGTTGCCGAGTTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ASGEDPSHPGCG*RETMESCRVEA Trigger: TGCTTCAACTCGGCAACTCTCCATGGTTTCCCTTCATCCGCAGCCGGGATGGCTGGGGTCCTCTCCACTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CCA 72 bp | GCCATGCTCAAAGAGCAAGAGGAAGAGCTAAGCCAGTaGAGAGGACCCCAGCCATCCCGGCTGCGGATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AMLKEQEEELSQ*RGPQPSRLRMK Trigger: CTTCATCCGCAGCCGGGATGGCTGGGGTCCTCTCCACTGGCTTAGCTCTTCCTCTTGCTCTTTGAGCATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | AGAAGAGGGACGGACTGGGAAGAGGAAGCGAACGAGTaGAGTAGGAGGGGAACAGGAAAGCGTCACAGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RRGTDWEEEANE*SRRGTGKRHRG Trigger: ACCCCTGTGACGCTTTCCTGTTCCCCTCCTACTTCACTCGTTCGCTTCCTCTTCCCAGTCCGTCCCTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CCA 72 bp | ACCCCAGCCATCCCGGCTGCGGATGAAGGGAAACCATaGAGAGTTGCCGAGTTGAAGCAGACTGTACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TPAIPAADEGKP*RVAELKQTVQS Trigger: GCTTTGTACAGTCTGCTTCAACTCGGCAACTCTCCATGGTTTCCCTTCATCCGCAGCCGGGATGGCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CCA 72 bp | CCCCAGCTAGCCTCAAATCCATGTGTCTGCCTCCCTTaGTCTCCCGCGTGTTGGGACTACATGTATGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PQLASNPCVCLP*SPACWDYMYEL Trigger: CAGCTCATACATGTAGTCCCAACACGCGGGAGACCAAGGGAGGCAGACACATGGATTTGAGGCTAGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | GCACACAACAGAACCTGTGCTAGAGGCAGCCAAAAGTaGCAGACACCGTGGAGAGGAAGGAAGTCCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AHNRTCARGSQK*QTPWRGRKSLL Trigger: CAGCAGGGACTTCCTTCCTCTCCACGGTGTCTGTCACTTTTGGCTGCCTCTAGCACAGGTTCTGTTGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGI*TLDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | CCGCGTGTTGGGACTACATGTATGAGCTGCCATGCCTaGCTGATATTTGCCATGGATACCTGGATGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PRVGTTCMSCHA*LIFAMDTWMGE Trigger: CTCTCCCATCCAGGTATCCATGGCAAATATCAGTCAGGCATGGCAGCTCATACATGTAGTCCCAACACGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CCA 72 bp | CATGAGCCCTCTCCCCCAGCCCTCCCTGATGATCTATaGCAGTTAGTGGTTGATGAGAGGAGATACACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: HEPSPPALPDDL*QLVVDERRYTF Trigger: GAAAGTGTATCTCCTCTCATCAACCACTAACTGCCATAGATCATCAGGGAGGGCTGGGGGAGAGGGCTCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CCA 72 bp | CTCGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTCGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | CTGAAGTTAGAAGCCACACAGCAATCTGCGGGGTGGTaGGATGGCTCAGTGGTAAAACACTTCCTGCGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKLEATQQSAGW*DGSVVKHFLRK Trigger: CTTACGCAGGAAGTGTTTTACCACTGAGCCATCTCACCACCCCGCAGATTGCTGTGTGGCTTCTAACTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR GCA 72 bp | GATCTCGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLVTDGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR GCA 72 bp | GATCTCATTACGGGTGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTTTGGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLITGGCEPPCG*WDLNFGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCGTAATGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CCA 72 bp | AGGCCAGTGCACATCAACACTATCAAATGTAAACCGTaGGGGCCACAGGCCACATTGAAGAGGAGACAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RPVHINTIKCKP*GPQATLKRRQN Trigger: GTTCTGTCTCCTCTTCAATGTGGCCTGTGGCCCCCACGGTTTACATTTGATAGTGTTGATGTGCACTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR GCA 72 bp | AAAAGTGACAGACACCGTGGAGAGGAAGGAAGTCCCTaGTGTGGAACGTGGTCCTTTGAAGTTATTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: KSDRHRGEEGSP*CGTWSFEVIPL Trigger: GAGAGGAATAACTTCAAAGGACCACGTTCCACAGCAGGGACTTCCTTCCTCTCCACGGTGTCTGTCACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTCCAGCCAGGTCTCCATaGAGAGTTGGAGCCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FGFLVNQETFHCLKSGSCPARSP*RVGASQ Trigger: CTGGCTGGCTCCAACTCTCAATGGAGACCTGGCTGG...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | CTGCGGATGAAGGGAAACCATGGAGAGTTGCCGAGTTaGAGCAGACTGTACAAAGCAGCATTCTTTACACCT | + |
|
Preference number: 3 (lower is better) Translates to: LRMKGNHGELPS*SRLYKAAFFTP Trigger: AGGTGTAAAGAATGCTGCTTTGTACAGTCTGCTTCAACTCGGCAACTCTCCATGGTTTCCCTTCATCCGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CCA 72 bp | GCCACCACTGCCCGGCTGGGGCTAACTTTTAATTACTaGAATTGTGAATGGCATCACTGCAACTTACCATTG | + |
|
Preference number: 3 (lower is better) Translates to: ATTARLGLTFNY*NCEWHHCNLPL Trigger: CAATGGTAAGTTGCAGTGATGCCATTCACAATTCCAGTAATTAAAAGTTAGCCCCAGCCGGGCAGTGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CCA 72 bp | GTGGGGGTAAATGATGTAAGAAGAGTGAAGTGTCTGTaGAACACTGTTTCCTGGCCATGCCACAGTCATCAG | + |
|
Preference number: 3 (lower is better) Translates to: VGVNDVRRVKCL*NTVSWPCHSHQ Trigger: CTGATGACTGTGGCATGGCCAGGAAACAGTGTTCCACAGACACTTCACTCTTCTTACATCATTTACCCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CAA 90 bp | CCATTGAGAGTTGGAGCCAGCCAGAGCTACACAGTGAGACCCTGGACTCAATATAAGAATCCATTTGCTTaGGGGTCCTGCTTCAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PLRVGASQSYTVRPWTQYKNPFA*GSCFSY Trigger: ATAACTGAAGCAGGACCCCAAAGCAAATGGATTCTT...ATATTGAGTCCAGGGTCTCACTGTGTAGCTCTGGCTGGCTCCAACTCTCAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | CTATCAAATGTAAACCGTGGGGGCCACAGGCCACATTaGAGAGGAGACAGAACTTTGCAACTTCAAATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSNVNRGGHRPH*RGDRTLQLQIS Trigger: GGAGATTTGAAGTTGCAAAGTTCTGTCTCCTCTTCAATGTGGCCTGTGGCCCCCACGGTTTACATTTGATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTCACCGCTCTAGCTGCTaGCTGTCAATCACCACTCTA | + |
|
Preference number: 3 (lower is better) Translates to: FGFLVNQETFHCLKSGSCHRSSC*LSITTL Trigger: TAGAGTGGTGATTGACAGCAAGCAGCTAGAGCGGTG...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCAGTGGTAAAACACTTCCTGCGTAAGTCTGACAACTTGAGTTCAATCCACCTTGAGAAGCTCTTCTaGAGAAGAAGAGCAAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GSVVKHFLRKSDNLSSIHLEKLF*RRRAKD Trigger: GTCCTTTGCTCTTCTTCTCAAGAAGAGCTTCTCAAG...GTGGATTGAACTCAAGTTGTCAGACTTACGCAGGAAGTGTTTTACCACTGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAAACCATTTCGAACAGTaGCAAGAATTGCAGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: LNARGSSPSPAALHSKYTNHFEQ*QELQEW Trigger: CCATTCCTGCAATTCTTGCAACTGTTCGAAATGGTT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTGGGCCACAGGCCACATaGAAGAGGAGACAGAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: FGFLVNQETFHCLKSGSCGPQAT*KRRQNF Trigger: AAAGTTCTGTCTCCTCTTCAATGTGGCCTGTGGCCC...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | CACTGCTTTAGGCTAACGGTTAGACAGGAAGTTTGCTaGAGGAAGCACAACAGATCAGAAGGCTCTGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HCFRLTVRQEVC*RKHNRSEGSEN Trigger: ATTCTCAGAGCCTTCTGATCTGTTGTGCTTCCTTCAGCAAACTTCCTGTCTAACCGTTAGCCTAAAGCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | TCAGACCTTTCATTTTTAAACCTAATTCTGAGGTCTTaGATGCACGAGGGAGCTCTCCTTCACCAGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SDLSFLNLILRS*MHEGALLHQQH Trigger: GTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAAGACCTCAGAATTAGGTTTAAAAATGAAAGGTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGAAGAAGAGCAAAGGACTTAGGTGAGCAAGAAACTGGAGAATTTAGTTGCTTTCCAGAAGGATGGTaGAGTTCTCCAGACCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LRRRAKDLGEQETGEFSCFPEGW*SSPDPK Trigger: CTTGGGGTCTGGAGAACTCAACCATCCTTCTGGAAA...GCAACTAAATTCTCCAGTTTCTTGCTCACCTAAGTCCTTTGCTCTTCTTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAAAGAAGAATACTGGCTaGATGGGATTCAGAAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LNARGSSPSPAALHSKYTKKNTG*MGFRNL Trigger: CAGATTTCTGAATCCCATCAAGCCAGTATTCTTCTT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CCA 72 bp | CATCTCACCAGCCCACAAAACAGTATTTTAATGCACTaGTATACACACACACACACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: HLTSPQNSILMH*YTHTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCAGTGCATTAAAATACTGTTTTGTGGGCTGGTGAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCAGTGGTAAAACACTTCCTGCGTAAGTCTGACAACTTGAGTTCAATCCACATTCTAATGACAGAGTaGAAAACCACAACGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GSVVKHFLRKSDNLSSIHILMTE*KTTTSC Trigger: ACAGCTCGTTGTGGTTTTCAACTCTGTCATTAGAAT...GTGGATTGAACTCAAGTTGTCAGACTTACGCAGGAAGTGTTTTACCACTGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | GAAGCTCCAAGCCTCATCATCTTGTACCAGGGAACATaGTCAGCAGGTGACGAAGATACAAACAAATCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EAPSLIILYQGT*SAGDEDTNKSK Trigger: TTTTGATTTGTTTGTATCTTCGTCACCTGCTGATCATGTTCCCTGGTACAAGATGATGAGGCTTGGAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | GACAACAAACTGCCTGTTATGTTTTGGGCCCATAGGTaGATGCTACAGTCAGCTTTTGTCAAAGAAACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DNKLPVMFWAHR*MLQSAFVKETP Trigger: AGGAGTTTCTTTGACAAAAGCTGACTGTAGCATTCACCTATGGGCCCAAAACATAACAGGCAGTTTGTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | GAACTTACTACACCAGGTCATTCCAAGAGCCACTTCTaGATGAGGCTCAGAGAAATACAGTTTTACATGACA | + |
|
Preference number: 3 (lower is better) Translates to: ELTTPGHSKSHF*MRLREIQFYMT Trigger: TGTCATGTAAAACTGTATTTCTCTGAGCCTCATTCAGAAGTGGCTCTTGGAATGACCTGGTGTAGTAAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | CCTCATCATCTTGTACCAGGGAACATGATCAGCAGGTaGCGAAGATACAAACAAATCAAAAGAAGAATACTG | + |
|
Preference number: 3 (lower is better) Translates to: PHHLVPGNMISR*RRYKQIKRRIL Trigger: CAGTATTCTTCTTTTGATTTGTTTGTATCTTCGTCACCTGCTGATCATGTTCCCTGGTACAAGATGATGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | TTGAAAAACCAAGACCTAAATGAAGTGCACTGGACTTaGGAAGCTCTTCTTGAGAAGAAGAGCAAAGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: LKNQDLNEVHWT*EALLEKKSKGL Trigger: AAGTCCTTTGCTCTTCTTCTCAAGAAGAGCTTCTCAAGTCCAGTGCACTTCATTTAGGTCTTGGTTTTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | AAGGATCTAAGAACATTATGGAACAGTGGGGGTAAATaGTGTAAGAAGAGTGAAGTGTCTGTGGAACACTGT | + |
|
Preference number: 3 (lower is better) Translates to: KDLRTLWNSGGK*CKKSEVSVEHC Trigger: ACAGTGTTCCACAGACACTTCACTCTTCTTACATCATTTACCCCCACTGTTCCATAATGTTCTTAGATCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | ACAAACCTCAAGCTTAATACTGTACAAAGTCCTGTGTaGCTTCATGCTGTGCTAACTTCTCTCAACCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: TNLKLNTVQSPV*LHAVLTSLNLI Trigger: TATCAGGTTGAGAGAAGTTAGCACAGCATGAAGTCACACAGGACTTTGTACAGTATTAAGCTTGAGGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR GCA 72 bp | TACAGGCTCAAGAAATATCTCACATCTTCTGACATGTaGTCATGTTTACAACCCGTACTGACAAAACAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: YRLKKYLTSSDM*SCLQPVLTKQY Trigger: GTACTGTTTTGTCAGTACGGGTTGTAAACATGAGCACATGTCAGAAGATGTGAGATATTTCTTGAGCCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR GCA 72 bp | AAAATTAAGCATAAAAGTGCATTTGAAGTTAAGGGCTaGATTCCACATTCCTGTTCTTGTGAAGACCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: KIKHKSAFEVKG*IPHSCSCEDLT Trigger: GGTCAGGTCTTCACAAGAACAGGAATGTGGAATGCAGCCCTTAACTTCAAATGCACTTTTATGCTTAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | GTCTTTAATCAAATCTTCTTCAGCTTCATGGCGACATaGAATTTACAGAGAAGACAGAGTACACAGAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VFNQIFFSFMAT*NLQRRQSTQKG Trigger: TCCTTTCTGTGTACTCTGTCTTCTCTGTAAATTTCATGTCGCCATGAAGCTGAAGAAGATTTGATTAAAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | CTCAATATTAAAACAATGATGACAACAAAGATACCATaGGCACACACTAAAACCACCATAGAAGCAGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: LNIKTMMTTKIP*AHTKTTIEAAC Trigger: ACATGCTGCTTCTATGGTGGTTTTAGTGTGTGCTCATGGTATCTTTGTTGTCATCATTGTTTTAATATTGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR GCA 72 bp | AGACCTGAAAACCCATATCACACCGTGGAAATTACCTaGAGCTTAAAAACAAACAAACAAACAAACAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: RPENPYHTVEIT*SLKTNKQTNKQ Trigger: TTGTTTGTTTGTTTGTTTGTTTGTTTTTAAGCTGCAGGTAATTTCCACGGTGTGATATGGGTTTTCAGGTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR TCA 72 bp | ACACACACACACACACCTCTAATACCTTCAATTTTCTaGCCAATTATTAAACATGATTATGGAATGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: THTHTPLIPSIF*PIIKHDYGMEA Trigger: TGCTTCCATTCCATAATCATGTTTAATAATTGGTCAGAAAATTGAAGGTATTAGAGGTGTGTGTGTGTGTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTCGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR GCA 90 bp | CCATTGAGAGTTGGAGCCAGCCAGAGCTACACAGTGAGACCCTGGACTCAATATGGAGGTTTTCGGCAATaGGTGCTACTTCCAGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLRVGASQSYTVRPWTQYGGFRQ*VLLPAV Trigger: CACCGCTGGAAGTAGCACGCATTGCCGAAAACCTCC...ATATTGAGTCCAGGGTCTCACTGTGTAGCTCTGGCTGGCTCCAACTCTCAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR GCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACACCCCAGCACCAGAAGTaGCGTCCTTTCCACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNARGSSPSPAALHSKYTPQHQK*RPFHSW Trigger: CCAGCTGTGGAAAGGACGGCACTTCTGGTGCTGGGG...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR GCA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAGTTTTCGGCAATGCGTaGTACTTCCAGCGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNARGSSPSPAALHSKYTVFGNA*YFQRCC Trigger: GCAGCACCGCTGGAAGTAGCACGCATTGCCGAAAAC...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR CCA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTCGTCCTTTCCACAGCTaGGCTTGCTCTGGTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FGFLVNQETFHCLKSGSCRPFHS*ACSGRC Trigger: GCAGCGACCAGAGCAAGCCCAGCTGTGGAAAGGACG...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CAA 72 bp | GAGAGGAAGGAAGTCCCTGCTGTGGAACGTGGTCCTTaGAAGTTATTCCTCTCAAGATTCTACTTTAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ERKEVPAVERGP*KLFLSRFYFRE Trigger: CTCCCTAAAGTAGAATCTTGAGAGGAATAACTTCAAAGGACCACGTTCCACAGCAGGGACTTCCTTCCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CAA 72 bp | ACTATCAAATGTAAACCGTGGGGGCCACAGGCCACATaGAAGAGGAGACAGAACTTTGCAACTTCAAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TIKCKPWGPQAT*KRRQNFATSNL Trigger: GAGATTTGAAGTTGCAAAGTTCTGTCTCCTCTTCAATGTGGCCTGTGGCCCCCACGGTTTACATTTGATAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CAA 72 bp | CTCCTAGTTCTAAAGGTCATGTTTCCAGAAGGATGGTaGAGTTCTCCAGACCCCAAGGGCAATGTGTATAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLKVMFPEGW*SSPDPKGNVYN Trigger: ATTATACACATTGCCCTTGGGGTCTGGAGAACTCAACCATCCTTCTGGAAACATGACCTTTAGAACTAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CAA 72 bp | ATCAGACCTTTCATTTTTAAACCTAATTCTGAGGTCTaGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRPFIFKPNSEV*NARGSSPSPAA Trigger: TGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAAGACCTCAGAATTAGGTTTAAAAATGAAAGGTCTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR TCA 90 bp | GTACTGTTTACTCTAACCCACACATGGTATAAACATGATGGGTGCAGCAACAAACGTTTCCAATCTTTTTaGAAGCATCCGTGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLFTLTHTWYKHDGCSNKRFQSF*KHPWLQ Trigger: CTGGAGCCACGGATGCTTTCAAAAAGATTGGAAACG...TTTGTTGCTGCACCCATCATGTTTATACCATGTGTGGGTTAGAGTAAACAGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR TCA 90 bp | TTGAGAAGAAGAGCAAAGGACTTAGGTGAGCAAGAAACTGGAGAATTTAGTTGCATGATGGGCATGAGCTaGATGAAGACAGAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRRRAKDLGEQETGEFSCMMGMS*MKTEKP Trigger: AGGCTTCTCTGTCTTCATTCAGCTCATGCCCATCAT...GCAACTAAATTCTCCAGTTTCTTGCTCACCTAAGTCCTTTGCTCTTCTTCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR CCA 90 bp | GAACATGATCAGCAGGTGACGAAGATACAAACAAATCAAAAGAAGAATACTGGCGTCCTGATCCAGATCTaGGGTATAAGGAGTACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EHDQQVTKIQTNQKKNTGVLIQI*GIRSTE Trigger: CTCCGTACTCCTTATACCCCAGATCTGGATCAGGAC...GCCAGTATTCTTCTTTTGATTTGTTTGTATCTTCGTCACCTGCTGATCATGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CAA 72 bp | TGTTTTGGGCCCATAGGTGAATGCTACAGTCAGCTTTaGTCAAAGAAACTCCTCCTCCTCCTTCTTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CFGPIGECYSQL*SKKLLLLLLLS Trigger: ACTTAAAAGAAGGAGGAGGAGGAGTTTCTTTGACAAAAGCTGACTGTAGCATTCACCTATGGGCCCAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR TCA 90 bp | TTTGGCTTTCTGGTCAACCAAGAAACATTTCACTGCTTAAAAAGTGGGAGCTGTTACATTTGTTTATGCTaGGCACGCCCTCTACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FGFLVNQETFHCLKSGSCYICLC*ARPLLG Trigger: ACCAAGTAGAGGGCGTGCTCAGCATAAACAAATGTA...ACAGCTCCCACTTTTTAAGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR CCA 90 bp | TTGAGAAGAAGAGCAAAGGACTTAGGTGAGCAAGAAACTGGAGAATTTAGTTGCCCTCTACTTGGTCTTTaGTATAGACTTTCCCGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRRAKDLGEQETGEFSCPLLGL*YRLSRL Trigger: AAGGCGGGAAAGTCTATACCAAAGACCAAGTAGAGG...GCAACTAAATTCTCCAGTTTCTTGCTCACCTAAGTCCTTTGCTCTTCTTCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| 3UTR CAA 72 bp | TGTTTAAATACTTGGATAATTGAGATGATGGCTCATTaGGCTTTCTGGTCAACCAAGAAACATTTCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLNTWIIEMMAH*AFWSTKKHFTA Trigger: AGCAGTGAAATGTTTCTTGGTTGACCAGAAAGCCAAATGAGCCATCATCTCAATTATCCAAGTATTTAAACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS GCA 90 bp | CGCCTTCCCCAGCACCAGAAGTGCCGTCCTTTCCACAGCTGGGCTTaGTCTGGTCGCTGCTCCCAGGAGGTTTTCGGCAATGCGTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: RLPQHQKCRPFHSWA*SGRCSQEVFGNACY Trigger: GTAGCACGCATTGCCGAAAACCTCCTGGGAGCAGCGACCAGAGCAAGCCCAGCTGTGGAAAGGACGGCACTTCTGGTGCTGGGGAAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
||
| CDS CCA 90 bp | CTTTCCCGCCTTCCCCAGCACCAGAAGTGCCGTCCTTTCCACAGCTaGGCTTGCTCTGGTCGCTGCTCCCAGGAGGTTTTCGGCAATGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSRLPQHQKCRPFHS*ACSGRCSQEVFGNA Trigger: CGCATTGCCGAAAACCTCCTGGGAGCAGCGACCAGAGCAAGCCCAGCTGTGGAAAGGACGGCACTTCTGGTGCTGGGGAAGGCGGGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
||
| CDS GCA 90 bp | CACCAGAAGTGCCGTCCTTTCCACAGCTGGGCTTGCTCTGGTCGCTaGTCCCAGGAGGTTTTCGGCAATGCGTGCTACTTCCAGCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HQKCRPFHSWACSGR*SQEVFGNACYFQRC Trigger: GCACCGCTGGAAGTAGCACGCATTGCCGAAAACCTCCTGGGAGCAGCGACCAGAGCAAGCCCAGCTGTGGAAAGGACGGCACTTCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
||
| CDS GCA 90 bp | CTTGGTCTTTGGTATAGACTTTCCCGCCTTCCCCAGCACCAGAAGTaGCGTCCTTTCCACAGCTGGGCTTGCTCTGGTCGCTGCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGLWYRLSRLPQHQK*RPFHSWACSGRCSQ Trigger: CTGGGAGCAGCGACCAGAGCAAGCCCAGCTGTGGAAAGGACGGCACTTCTGGTGCTGGGGAAGGCGGGAAAGTCTATACCAAAGACCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
||
| CDS-3UTR CAA 90 bp | CCATTGAGAGTTGGAGCCAGCCAGAGCTACACAGTGAGACCCTGGACTCAATATTTTCCACAGCTGGGCTaGCTCTGGTCGCTGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLRVGASQSYTVRPWTQYFPQLG*LWSLLP Trigger: TGGGAGCAGCGACCAGAGCAAGCCCAGCTGTGGAAA...ATATTGAGTCCAGGGTCTCACTGTGTAGCTCTGGCTGGCTCCAACTCTCAATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS GCA 90 bp | CAGCTGGGCTTGCTCTGGTCGCTGCTCCCAGGAGGTTTTCGGCAATaGGTGCTACTTCCAGCGGTGCTGCCGTTTTTCATAATTATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QLGLLWSLLPGGFRQ*VLLPAVLPFFIIIS Trigger: GGAAATAATTATGAAAAACGGCAGCACCGCTGGAAGTAGCACGCATTGCCGAAAACCTCCTGGGAGCAGCGACCAGAGCAAGCCCAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS CCA 90 bp | CCAGATCTGGGGTATAAGGAGTACGGAGGGTTCGAGACCATCAGCTaGCTTAACAAGGACACAAGGATCAGCACAATGATGGGCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PDLGYKEYGGFETIS*LNKDTRISTMMGMS Trigger: GCTCATGCCCATCATTGTGCTGATCCTTGTGTCCTTGTTAAGCCAGCTGATGGTCTCGAACCCTCCGTACTCCTTATACCCCAGATCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR CAA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAAGCCGCTCTAGCTCCTaGCAGTTCTCCATGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LNARGSSPSPAALHSKYTSRSSS*QFSMLR Trigger: CCTGAGCATGGAGAACTGCAAGGAGCTAGAGCGGCT...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR CAA 90 bp | TTGAATGCACGAGGGAGCTCTCCTTCACCAGCAGCACTTCATTCTAAGTACACAGAGCACGCCCTCTACTaGGTCTTTGGTATAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LNARGSSPSPAALHSKYTEHALY*VFGIDF Trigger: AAAGTCTATACCAAAGACCAAGTAGAGGGCGTGCTC...TGTGTACTTAGAATGAAGTGCTGCTGGTGAAGGAGAGCTCCCTCGTGCATTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS TCA 90 bp | TGGCTTAACAAGGACACAAGGATCAGCACAATGATGGGCATGAGCTaGATGAAGACAGAGAAGCCTCCATCCGCTCTTTCTTCTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLNKDTRISTMMGMS*MKTEKPPSALSSSL Trigger: AAGAGAAGAAGAAAGAGCGGATGGAGGCTTCTCTGTCTTCATTCAGCTCATGCCCATCATTGTGCTGATCCTTGTGTCCTTGTTAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGTGGTAAAACACTTCCTGCGTAAGTCTGACAACTTGAGTTCAATCCACCCGCCAAAGAAGATATaGAACAGGTCTTCGGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GSVVKHFLRKSDNLSSIHPPKKI*NRSSGV Trigger: AACTCCCGAAGACCTGTTCAATATCTTCTTTGGCGG...GTGGATTGAACTCAAGTTGTCAGACTTACGCAGGAAGTGTTTTACCACTGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS-3UTR CAA 90 bp | GGCTCAGTGGTAAAACACTTCCTGCGTAAGTCTGACAACTTGAGTTCAATCCACAAGCAGCCCGGCCATTaGAAAATGAATGTACACTAC | + |
|
Preference number: 5 (lower is better) Translates to: GSVVKHFLRKSDNLSSIHKQPGH*KMNVHY Trigger: GTAGTGTACATTCATTTTCAAATGGCCGGGCTGCTT...GTGGATTGAACTCAAGTTGTCAGACTTACGCAGGAAGTGTTTTACCACTGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS CAA 90 bp | CCGCCTTCCCCAGCACCAGAAGTGCCGTCCTTTCCACAGCTGGGCTaGCTCTGGTCGCTGCTCCCAGGAGGTTTTCGGCAATGCGTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PPSPAPEVPSFPQLG*LWSLLPGGFRQCVL Trigger: TAGCACGCATTGCCGAAAACCTCCTGGGAGCAGCGACCAGAGCAAGCCCAGCTGTGGAAAGGACGGCACTTCTGGTGCTGGGGAAGGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
||
| CDS GCA 72 bp | GACTGGTCAGCCGCTCTAGCTCCTTGCAGTTCTCCATaGTCAGGGCATCCGCCTTCCTCCGCAGCTGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: DWSAALAPCSSP*SGHPPSSAAAH Trigger: ATGAGCAGCTGCGGAGGAAGGCGGATGCCCTGAGCATGGAGAACTGCAAGGAGCTAGAGCGGCTGACCAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
||
| CDS CCA 72 bp | CTTCCCCAGCACCAGAAGTGCCGTCCTTTCCACAGCTaGGCTTGCTCTGGTCGCTGCTCCCAGGAGGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPQHQKCRPFHS*ACSGRCSQEVF Trigger: GAAAACCTCCTGGGAGCAGCGACCAGAGCAAGCCCAGCTGTGGAAAGGACGGCACTTCTGGTGCTGGGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
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| CDS CAA 72 bp | CCAGCACCAGAAGTGCCGTCCTTTCCACAGCTGGGCTaGCTCTGGTCGCTGCTCCCAGGAGGTTTTCGGCAA | + |
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Preference number: 6 (lower is better) Translates to: PAPEVPSFPQLG*LWSLLPGGFRQ Trigger: TTGCCGAAAACCTCCTGGGAGCAGCGACCAGAGCAAGCCCAGCTGTGGAAAGGACGGCACTTCTGGTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
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| CDS GCA 72 bp | TGCCGTCCTTTCCACAGCTGGGCTTGCTCTGGTCGCTaGTCCCAGGAGGTTTTCGGCAATGCGTGCTACTTC | + |
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Preference number: 6 (lower is better) Translates to: CRPFHSWACSGR*SQEVFGNACYF Trigger: GAAGTAGCACGCATTGCCGAAAACCTCCTGGGAGCAGCGACCAGAGCAAGCCCAGCTGTGGAAAGGACGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
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| CDS GCA 72 bp | CAGCACCAGAAGTGCCGTCCTTTCCACAGCTGGGCTTaGTCTGGTCGCTGCTCCCAGGAGGTTTTCGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: QHQKCRPFHSWA*SGRCSQEVFGN Trigger: ATTGCCGAAAACCTCCTGGGAGCAGCGACCAGAGCAAGCCCAGCTGTGGAAAGGACGGCACTTCTGGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
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| CDS GCA 72 bp | TGGTATAGACTTTCCCGCCTTCCCCAGCACCAGAAGTaGCGTCCTTTCCACAGCTGGGCTTGCTCTGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: WYRLSRLPQHQK*RPFHSWACSGR Trigger: GCGACCAGAGCAAGCCCAGCTGTGGAAAGGACGGCACTTCTGGTGCTGGGGAAGGCGGGAAAGTCTATACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
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| CDS GCA 72 bp | TTGCTCTGGTCGCTGCTCCCAGGAGGTTTTCGGCAATaGGTGCTACTTCCAGCGGTGCTGCCGTTTTTCATA | + |
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Preference number: 6 (lower is better) Translates to: LLWSLLPGGFRQ*VLLPAVLPFFI Trigger: TATGAAAAACGGCAGCACCGCTGGAAGTAGCACGCATTGCCGAAAACCTCCTGGGAGCAGCGACCAGAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| CDS TCA 72 bp | AAGGACACAAGGATCAGCACAATGATGGGCATGAGCTaGATGAAGACAGAGAAGCCTCCATCCGCTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KDTRISTMMGMS*MKTEKPPSALS Trigger: AGAAAGAGCGGATGGAGGCTTCTCTGTCTTCATTCAGCTCATGCCCATCATTGTGCTGATCCTTGTGTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090178.10 |
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| CDS CAA 72 bp | ATTTTTACATTTGTTTATGCTGAGCACGCCCTCTACTaGGTCTTTGGTATAGACTTTCCCGCCTTCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: IFTFVYAEHALY*VFGIDFPAFPS Trigger: GCTGGGGAAGGCGGGAAAGTCTATACCAAAGACCAAGTAGAGGGCGTGCTCAGCATAAACAAATGTAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090178.10 ENSMUST00000197711.2 |
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