Pregenerated sensors for DNAJB13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030708Ensembl transcript IDs: ENSMUST00000054923.9, ENSMUST00000154516.3, ENSMUST00000207405.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCATCCCTGTTCCTGCTCAGGTCCCCCAGAATTAGGTCAGCAATaGCTGGCGCAGCATCTGCTTCTTCTGGGGTGTGAGGCGGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LHPCSCSGPPELGQQ*LAQHLLLLGCEAGG Trigger: CCCACCCGCCTCACACCCCAGAAGAAGCAGATGCTGCGCCAGGCATTGCTGACCTAATTCTGGGGGACCTGAGCAGGAACAGGGATGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR TCA 90 bp | CAGCCTAAGGTCTCACGCCTCCCCATCTTCATAGGCTGTGGGAGTTaGGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCC | + |
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Preference number: 1 (lower is better) Translates to: QPKVSRLPIFIGCGS*VDRSRQGPASPLHP Trigger: GGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCCCACAGCCTATGAAGATGGGGAGGCGTGAGACCTTAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR GCA 90 bp | TTGGGGCCCTGGTCCCCTTCCTTCTCAAAGGTGATGCGTGTGCCCTaGCTCCATCCAGGTCTCACATCGATGGTCAGGATCTTGTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: LGPWSPSFSKVMRVP*LHPGLTSMVRILSL Trigger: CAAGGACAAGATCCTGACCATCGATGTGAGACCTGGATGGAGGCAGGGCACACGCATCACCTTTGAGAAGGAAGGGGACCAGGGCCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR GCA 90 bp | AGGGCCTTGCCCAAAGGAATGGGGTACACGAAGAAGAGGTTGTCATaGTCCCTGCGGAAGCGAGGGTGCAGCTTCTCCTTCACAATGAAG | + |
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Preference number: 1 (lower is better) Translates to: RALPKGMGYTKKRLS*SLRKRGCSFSFTMK Trigger: CTTCATTGTGAAGGAGAAGCTGCACCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTCCTTTGGGCAAGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR TCA 90 bp | TCGCAAAGCCCTGCCTCCTGTTGCCAAGATGGAAGCAAGAAACTCTaGAGCCTCAGGGAACAGTCTGTGCCTAGGAAGGCAAAATGGGGC | + |
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Preference number: 1 (lower is better) Translates to: SQSPASCCQDGSKKL*SLREQSVPRKAKWG Trigger: GCCCCATTTTGCCTTCCTAGGCACAGACTGTTCCCTGAGGCTTCAGAGTTTCTTGCTTCCATCTTGGCAACAGGAGGCAGGGCTTTGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR GCA 90 bp | TCCTGGAGCTTGCTCTGTAGACCAGGCTTGTCTCAGAGATCTACCTaGATCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACTGCACC | + |
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Preference number: 1 (lower is better) Translates to: SWSLLCRPGLSQRST*ICLPSAGIKGVHCT Trigger: GGTGCAGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGATGCAGGTAGATCTCTGAGACAAGCCTGGTCTACAGAGCAAGCTCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR GCA 90 bp | AGCTTGCTCTGTAGACCAGGCTTGTCTCAGAGATCTACCTGCATCTaGCTCCCAAGTGCTGGGATTAAAGGTGTGCACTGCACCACCAAG | + |
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Preference number: 1 (lower is better) Translates to: SLLCRPGLSQRSTCI*LPSAGIKGVHCTTK Trigger: CTTGGTGGTGCAGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGATGCAGGTAGATCTCTGAGACAAGCCTGGTCTACAGAGCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR CCA 90 bp | GTCTCCCTTCTTGCTGGGGTTCTCAGGCAGTGGCATCCCCTCACCTaGCACAATCTTGAAGTACTTAGGGTGGACAATGTCGTTGATAGG | + |
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Preference number: 1 (lower is better) Translates to: VSLLAGVLRQWHPLT*HNLEVLRVDNVVDR Trigger: CCTATCAACGACATTGTCCACCCTAAGTACTTCAAGATTGTGCCAGGTGAGGGGATGCCACTGCCTGAGAACCCCAGCAAGAAGGGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR TCA 90 bp | AGACGGCACAGTCCACAGATGGTTCCTTCTAGAGATAGTCTGTTGTaGGATGTCAGGAGCAGAAGGACCTTAGAGGTCGCAAAGCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RRHSPQMVPSRDSLL*DVRSRRTLEVAKPC Trigger: GCAGGGCTTTGCGACCTCTAAGGTCCTTCTGCTCCTGACATCTCACAACAGACTATCTCTAGAAGGAACCATCTGTGGACTGTGCCGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCATCCCTGTTCCTGCTCAGGTCCCCCAGAATTAGGTCAGCAATGCCTGGCGCTTCCTTCTCAAAGGTaGTGCGTGTGCCCTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LHPCSCSGPPELGQQCLALPSQR*CVCPAS Trigger: GGAGGCAGGGCACACGCATCACCTTTGAGAAGGAAG...CGCCAGGCATTGCTGACCTAATTCTGGGGGACCTGAGCAGGAACAGGGATGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGCAATGCCTGGCGCAGCATCTGCTTCTTCTGGGGTGTGAGGCGGGTGGGTGGCATCCCCTCACCTaGCACAATCTTGAAGTACTT | + |
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Preference number: 2 (lower is better) Translates to: GQQCLAQHLLLLGCEAGGWHPLT*HNLEVL Trigger: AAGTACTTCAAGATTGTGCCAGGTGAGGGGATGCCA...CCCACCCGCCTCACACCCCAGAAGAAGCAGATGCTGCGCCAGGCATTGCTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR CAA 90 bp | CAGGTAAGGGCCTTGCCCAAAGGAATGGGGTACACGAAGAAGAGGTaGTCATGCTCCCTGCGGAAGCGAGGGTGCAGCTTCTCCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: QVRALPKGMGYTKKR*SCSLRKRGCSFSFT Trigger: TGTGAAGGAGAAGCTGCACCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTCCTTTGGGCAAGGCCCTTACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCAGGTCCCCCAGAATTAGGTCAGCAATGCCTGGCGCAGCATCTGCTTCTAGAGGTCTCCCTTCTTaGTGGGGTTCTCAGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LLRSPRIRSAMPGAASASRGLPS*WGSQAV Trigger: CACTGCCTGAGAACCCCAGCAAGAAGGGAGACCTCT...AGAAGCAGATGCTGCGCCAGGCATTGCTGACCTAATTCTGGGGGACCTGAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR GCA 90 bp | GTCATCAAGAGTCTTCACCTCCACAGTGCAGCAGGTAAGGGCCTTGCCCAAAGGAAGAAGAGGTTGTCATaGTCCCTGCGGAAGCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VIKSLHLHSAAGKGLAQRKKRLS*SLRKRG Trigger: CCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTT...CCTTTGGGCAAGGCCCTTACCTGCTGCACTGTGGAGGTGAAGACTCTTGATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR TCA 90 bp | GCAAGAGTCAGGAGTTCAAGTGCCCATGTCTCGCAGGCTACTGGTCAGAGGCAGGGAAGCAAGAAACTCTaGAGCCTCAGGGAACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: ARVRSSSAHVSQATGQRQGSKKL*SLREQS Trigger: AGACTGTTCCCTGAGGCTTCAGAGTTTCTTGCTTCC...CTGCCTCTGACCAGTAGCCTGCGAGACATGGGCACTTGAACTCCTGACTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAGAGTCAGGAGTTCAAGTGCCCATGTCTCGCAGGCTACTGGTCAGAGGCAGAGCCCTGCCTCCTGTTaGCAAGATGGAAGCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ARVRSSSAHVSQATGQRQSPASC*QDGSKK Trigger: TTTCTTGCTTCCATCTTGGCAACAGGAGGCAGGGCT...CTGCCTCTGACCAGTAGCCTGCGAGACATGGGCACTTGAACTCCTGACTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCACAGTGCAGCAGGTAAGGGCCTTGCCCAAAGGAATGGGGTACACGAAGAAATGATGTTGGGGCCCTaGTCCCCTTCCTTCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LHSAAGKGLAQRNGVHEEMMLGP*SPSFSK Trigger: CTTTGAGAAGGAAGGGGACCAGGGCCCCAACATCAT...TTCTTCGTGTACCCCATTCCTTTGGGCAAGGCCCTTACCTGCTGCACTGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGTCAGGAGTTCAAGTGCCCATGTCTCGCAGGCTACTGGTCAGAGGCAGCCTGGCACTGTGTTCTaGGTGTGGCTGTTAACTGAA | + |
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Preference number: 2 (lower is better) Translates to: ARVRSSSAHVSQATGQRQPGTVF*VWLLTE Trigger: TTCAGTTAACAGCCACACCCAGAACACAGTGCCAGG...CTGCCTCTGACCAGTAGCCTGCGAGACATGGGCACTTGAACTCCTGACTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR CAA 90 bp | AGTGACAGCTTAGCCACGGACACAAGCGCTGTCCCTGCCTGTGCTTaGCTTTCCTGTCTATGTTTCTCAAGACGGCACAGTCCACAGATG | + |
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Preference number: 2 (lower is better) Translates to: SDSLATDTSAVPACA*LSCLCFSRRHSPQM Trigger: CATCTGTGGACTGTGCCGTCTTGAGAAACATAGACAGGAAAGCAAAGCACAGGCAGGGACAGCGCTTGTGTCCGTGGCTAAGCTGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR CAA 90 bp | TTGCTGGGGTTCTCAGGCAGTGGCATCCCCTCACCTGGCACAATCTaGAAGTACTTAGGGTGGACAATGTCGTTGATAGGGATGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LLGFSGSGIPSPGTI*KYLGWTMSLIGMLS Trigger: GCTCAACATCCCTATCAACGACATTGTCCACCCTAAGTACTTCAAGATTGTGCCAGGTGAGGGGATGCCACTGCCTGAGAACCCCAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR CAA 90 bp | CCCTCACCTGGCACAATCTTGAAGTACTTAGGGTGGACAATGTCGTaGATAGGGATGTTGAGCAGCCGGTCATCAAGAGTCTTCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: PSPGTILKYLGWTMS*IGMLSSRSSRVFTS Trigger: GGAGGTGAAGACTCTTGATGACCGGCTGCTCAACATCCCTATCAACGACATTGTCCACCCTAAGTACTTCAAGATTGTGCCAGGTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCAGGTCCCCCAGAATTAGGTCAGCAATGCCTGGCGCAGCATCTGCTTCTTTGAAGTACTTAGGGTaGACAATGTCGTTGATAGGG | + |
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Preference number: 2 (lower is better) Translates to: LLRSPRIRSAMPGAASASLKYLG*TMSLIG Trigger: CCCTATCAACGACATTGTCCACCCTAAGTACTTCAA...AGAAGCAGATGCTGCGCCAGGCATTGCTGACCTAATTCTGGGGGACCTGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR CAA 90 bp | ACAATCTTGAAGTACTTAGGGTGGACAATGTCGTTGATAGGGATGTaGAGCAGCCGGTCATCAAGAGTCTTCACCTCCACAGTGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TILKYLGWTMSLIGM*SSRSSRVFTSTVQQ Trigger: CTGCTGCACTGTGGAGGTGAAGACTCTTGATGACCGGCTGCTCAACATCCCTATCAACGACATTGTCCACCCTAAGTACTTCAAGATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR GCA 90 bp | TTGATCCCAAGGGTTTGGGGACAGCAGGGACAAGACTGTATGTGTTCAAAAGTATCAGGGAACAGTCTGTaGCTAGGAAGGCAAAATGGG | + |
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Preference number: 2 (lower is better) Translates to: LIPRVWGQQGQDCMCSKVSGNSL*LGRQNG Trigger: CCCATTTTGCCTTCCTAGGCACAGACTGTTCCCTGA...TACTTTTGAACACATACAGTCTTGTCCCTGCTGTCCCCAAACCCTTGGGATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCTCAGGTCCCCCAGAATTAGGTCAGCAATGCCTGGCGCAGCATCTGCTTCTTCAGCAGGGATGATGTaGGGGCCCTGGTCCCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LLRSPRIRSAMPGAASASSAGMM*GPWSPS Trigger: GGAAGGGGACCAGGGCCCCAACATCATCCCTGCTGA...AGAAGCAGATGCTGCGCCAGGCATTGCTGACCTAATTCTGGGGGACCTGAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR TCA 72 bp | GTCTCACGCCTCCCCATCTTCATAGGCTGTGGGAGTTaGGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: VSRLPIFIGCGS*VDRSRQGPASP Trigger: AGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCCCACAGCCTATGAAGATGGGGAGGCGTGAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR GCA 72 bp | AGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTaGTCAGGTCCCCCAGAATTAGGTCAGCAATGCCTG | + |
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Preference number: 3 (lower is better) Translates to: RQGPASPLHPCS*SGPPELGQQCL Trigger: CAGGCATTGCTGACCTAATTCTGGGGGACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR CAA 90 bp | AAGAGGTCTCCCTTCTTGCTGGGGTTCTCAGGCAGTGGCATCCCCTCACCTGGCTCGTTGATAGGGATGTaGAGCAGCCGGTCATCAAGA | + |
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Preference number: 3 (lower is better) Translates to: KRSPFLLGFSGSGIPSPGSLIGM*SSRSSR Trigger: TCTTGATGACCGGCTGCTCAACATCCCTATCAACGA...GCCAGGTGAGGGGATGCCACTGCCTGAGAACCCCAGCAAGAAGGGAGACCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR CAA 90 bp | GGTCCCCCAGAATTAGGTCAGCAATGCCTGGCGCAGCATCTGCTTCTTCTGGGGGGGTGGACAATGTCGTaGATAGGGATGTTGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GPPELGQQCLAQHLLLLGGWTMS*IGMLSS Trigger: GCTGCTCAACATCCCTATCAACGACATTGTCCACCC...CCCCAGAAGAAGCAGATGCTGCGCCAGGCATTGCTGACCTAATTCTGGGGGACC 57% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR GCA 72 bp | TGGTCCCCTTCCTTCTCAAAGGTGATGCGTGTGCCCTaGCTCCATCCAGGTCTCACATCGATGGTCAGGATC | + |
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Preference number: 3 (lower is better) Translates to: WSPSFSKVMRVP*LHPGLTSMVRI Trigger: GATCCTGACCATCGATGTGAGACCTGGATGGAGGCAGGGCACACGCATCACCTTTGAGAAGGAAGGGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR GCA 72 bp | CCCAAAGGAATGGGGTACACGAAGAAGAGGTTGTCATaGTCCCTGCGGAAGCGAGGGTGCAGCTTCTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: PKGMGYTKKRLS*SLRKRGCSFSF Trigger: GAAGGAGAAGCTGCACCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTCCTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR GCA 72 bp | TGTTCCTGCTCAGGTCCCCCAGAATTAGGTCAGCAATaGCTGGCGCAGCATCTGCTTCTTCTGGGGTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: CSCSGPPELGQQ*LAQHLLLLGCE Trigger: CTCACACCCCAGAAGAAGCAGATGCTGCGCCAGGCATTGCTGACCTAATTCTGGGGGACCTGAGCAGGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR TCA 72 bp | CCTGCCTCCTGTTGCCAAGATGGAAGCAAGAAACTCTaGAGCCTCAGGGAACAGTCTGTGCCTAGGAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: PASCCQDGSKKL*SLREQSVPRKA Trigger: TGCCTTCCTAGGCACAGACTGTTCCCTGAGGCTTCAGAGTTTCTTGCTTCCATCTTGGCAACAGGAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR TCA 72 bp | AGGCATAGGTGTGACTCCGGAAGCCAGACCTCCTCCTaGCCACAGGACAATGATGCTGTGACCCTCTCTATA | + |
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Preference number: 3 (lower is better) Translates to: RHRCDSGSQTSS*PQDNDAVTLSI Trigger: TATAGAGAGGGTCACAGCATCATTGTCCTGTGGTCAGGAGGAGGTCTGGCTTCCGGAGTCACACCTATGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR GCA 72 bp | GTCAGGAGCAGAAGGACCTTAGAGGTCGCAAAGCCCTaGCTCCTGTTGCCAAGATGGAAGCAAGAAACTCTG | + |
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Preference number: 3 (lower is better) Translates to: VRSRRTLEVAKP*LLLPRWKQETL Trigger: CAGAGTTTCTTGCTTCCATCTTGGCAACAGGAGGCAGGGCTTTGCGACCTCTAAGGTCCTTCTGCTCCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR GCA 72 bp | CAGCTTAGCCACGGACACAAGCGCTGTCCCTGCCTGTaGTTTGCTTTCCTGTCTATGTTTCTCAAGACGGCA | + |
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Preference number: 3 (lower is better) Translates to: QLSHGHKRCPCL*FAFLSMFLKTA Trigger: TGCCGTCTTGAGAAACATAGACAGGAAAGCAAAGCACAGGCAGGGACAGCGCTTGTGTCCGTGGCTAAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR CCA 72 bp | CTTGCTGGGGTTCTCAGGCAGTGGCATCCCCTCACCTaGCACAATCTTGAAGTACTTAGGGTGGACAATGTC | + |
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Preference number: 3 (lower is better) Translates to: LAGVLRQWHPLT*HNLEVLRVDNV Trigger: GACATTGTCCACCCTAAGTACTTCAAGATTGTGCCAGGTGAGGGGATGCCACTGCCTGAGAACCCCAGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR CCA 72 bp | GAAGAGGTCTCCCTTCTTGCTGGGGTTCTCAGGCAGTaGCATCCCCTCACCTGGCACAATCTTGAAGTACTT | + |
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Preference number: 3 (lower is better) Translates to: EEVSLLAGVLRQ*HPLTWHNLEVL Trigger: AAGTACTTCAAGATTGTGCCAGGTGAGGGGATGCCACTGCCTGAGAACCCCAGCAAGAAGGGAGACCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGGCAGTGGCATCCCCTCACCTGGCACAATCTTGAAGTACTTAGGGTGGACATACACGAAGAAGAGGTaGTCATGCTCCCTGCGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SGSGIPSPGTILKYLGWTYTKKR*SCSLRK Trigger: CTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTA...TGTCCACCCTAAGTACTTCAAGATTGTGCCAGGTGAGGGGATGCCACTGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR GCA 72 bp | CCTGCATCTGCCTCCCAAGTGCTGGGATTAAAGGTGTaGACTGCACCACCAAGTTTAGGCCTCTTATCTCAG | + |
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Preference number: 3 (lower is better) Translates to: PASASQVLGLKV*TAPPSLGLLSQ Trigger: CTGAGATAAGAGGCCTAAACTTGGTGGTGCAGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGATGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTTGTCTCAGAGATCTACCTGCATCTaGCTCCCAAGTGCTGGGATTAAAGGTGTGCACTGC | + |
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Preference number: 3 (lower is better) Translates to: CRPGLSQRSTCI*LPSAGIKGVHC Trigger: GCAGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGATGCAGGTAGATCTCTGAGACAAGCCTGGTCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR CCA 72 bp | TTAGAGGTCGCAAAGCCCTGCCTCCTGTTGCCAAGATaGAAGCAAGAAACTCTGAAGCCTCAGGGAACAGTC | + |
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Preference number: 3 (lower is better) Translates to: LEVAKPCLLLPR*KQETLKPQGTV Trigger: GACTGTTCCCTGAGGCTTCAGAGTTTCTTGCTTCCATCTTGGCAACAGGAGGCAGGGCTTTGCGACCTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCAAAGGAATGGGGTACACGAAGAAGAGGTTGTCATGCTCCCTGCGGAAGCGTCGATGGTCAGGATCTaGTCCTTGATGGTAGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: AQRNGVHEEEVVMLPAEASMVRI*SLMVEE Trigger: TTCTTCTACCATCAAGGACAAGATCCTGACCATCGA...CGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTCCTTTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR-3UTR CAA 90 bp | GAGCAGCCGGTCATCAAGAGTCTTCACCTCCACAGTGCAGCAGGTAAGGGCCTTGTCAGGATCTTGTCCTaGATGGTAGAAGAATATCTG | + |
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Preference number: 3 (lower is better) Translates to: EQPVIKSLHLHSAAGKGLVRILS*MVEEYL Trigger: CAGATATTCTTCTACCATCAAGGACAAGATCCTGAC...AAGGCCCTTACCTGCTGCACTGTGGAGGTGAAGACTCTTGATGACCGGCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR GCA 72 bp | TTGCTCTGTAGACCAGGCTTGTCTCAGAGATCTACCTaGATCTGCCTCCCAAGTGCTGGGATTAAAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: LLCRPGLSQRST*ICLPSAGIKGV Trigger: CACACCTTTAATCCCAGCACTTGGGAGGCAGATGCAGGTAGATCTCTGAGACAAGCCTGGTCTACAGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR CCA 72 bp | ATCCCCTCACCTGGCACAATCTTGAAGTACTTAGGGTaGACAATGTCGTTGATAGGGATGTTGAGCAGCCGG | + |
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Preference number: 3 (lower is better) Translates to: IPSPGTILKYLG*TMSLIGMLSSR Trigger: CCGGCTGCTCAACATCCCTATCAACGACATTGTCCACCCTAAGTACTTCAAGATTGTGCCAGGTGAGGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR GCA 72 bp | AAGAAGAGGTTGTCATGCTCCCTGCGGAAGCGAGGGTaGAGCTTCTCCTTCACAATGAAGATAATGTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: KKRLSCSLRKRG*SFSFTMKIMSA Trigger: TGCTGACATTATCTTCATTGTGAAGGAGAAGCTGCACCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR GCA 72 bp | ATCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCACTaGACCACCAAGTTTAGGCCTCTTATCTCAGGGTTT | + |
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Preference number: 3 (lower is better) Translates to: ICLPSAGIKGVH*TTKFRPLISGF Trigger: AAACCCTGAGATAAGAGGCCTAAACTTGGTGGTGCAGTGCACACCTTTAATCCCAGCACTTGGGAGGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| 3UTR TCA 72 bp | AGTCCACAGATGGTTCCTTCTAGAGATAGTCTGTTGTaGGATGTCAGGAGCAGAAGGACCTTAGAGGTCGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPQMVPSRDSLL*DVRSRRTLEVA Trigger: TGCGACCTCTAAGGTCCTTCTGCTCCTGACATCTCACAACAGACTATCTCTAGAAGGAACCATCTGTGGACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| 3UTR CCA 72 bp | AGAGATCAGAGCTCTCCTGGCACTGTGTTCTGGGTGTaGCTGTTAACTGAAGCTGTGAGTCTATATGGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RDQSSPGTVFWV*LLTEAVSLYGV Trigger: TACTCCATATAGACTCACAGCTTCAGTTAACAGCCACACCCAGAACACAGTGCCAGGAGAGCTCTGATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| 3UTR GCA 72 bp | AAATTTAAAAGGACAAAAGCTGGGTGTGGGACTGCATaGTTTAAATCCCAATACTCAGAGGCAGGTCGATCT | + |
|
Preference number: 3 (lower is better) Translates to: KFKRTKAGCGTA*FKSQYSEAGRS Trigger: AGATCGACCTGCCTCTGAGTATTGGGATTTAAAGCATGCAGTCCCACACCCAGCTTTTGTCCTTTTAAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTCCCGTGATGCGTGTGCCCTaGCTCCATCCAGGTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RSRQGPASPLHPCSCSGPVMRVP*LHPGLT Trigger: TGTGAGACCTGGATGGAGGCAGGGCACACGCATCAC...GGGACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGGGGTTCTCAGGCAGTaGCATCCCCTCACCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGVEWIGAGKAQLALSIPGVLRQ*HPLTWH Trigger: GTGCCAGGTGAGGGGATGCCACTGCCTGAGAACCCC...AGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTCCCAGAGGTCTCCCTTCTTaGTGGGGTTCTCAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSRQGPASPLHPCSCSGPRGLPS*WGSQAV Trigger: CACTGCCTGAGAACCCCAGCAAGAAGGGAGACCTCT...GGGACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTCGCCTGGCGCAGCATCTaGTTCTTCTGGGGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGAGKAQLALSIPVPAQVAWRSI*FFWGVR Trigger: CCTCACACCCCAGAAGAAGCAGATGCTGCGCCAGGC...GACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | GAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTGCCTGGCGCAGCATCTaGTTCTTCTGGGGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EWIGAGKAQLALSIPVPAAWRSI*FFWGVR Trigger: CCTCACACCCCAGAAGAAGCAGATGCTGCGCCAGGC...AGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTCGTGATGCGTGTGCCCTaGCTCCATCCAGGTCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: IGAGKAQLALSIPVPAQVVMRVP*LHPGLT Trigger: TGTGAGACCTGGATGGAGGCAGGGCACACGCATCAC...GACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTGGTCTCCCTTCTTGCTaGGGTTCTCAGGCAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EWIGAGKAQLALSIPVPAGLPSC*GSQAVA Trigger: TGCCACTGCCTGAGAACCCCAGCAAGAAGGGAGACC...AGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTCTTCCTTCTCAAAGGTaGTGCGTGTGCCCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VEWIGAGKAQLALSIPVPLPSQR*CVCPAS Trigger: GGAGGCAGGGCACACGCATCACCTTTGAGAAGGAAG...AGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTCCCACACTTTGTCAGGGTTaGCATGGAAGACGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSRQGPASPLHPCSCSGPTLCQG*HGRRSQ Trigger: CTGGCTACGTCTTCCATGGCAACCCTGACAAAGTGT...GGGACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054923.9 ENSMUST00000154516.3 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | TGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGAAGAAGAGGTTGTCATaGTCCCTGCGGAAGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WIGAGKAQLALSIPVPAQKKRLS*SLRKRG Trigger: CCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTT...CTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | GATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTAGAGGTCTCCCTTCTTaGTGGGGTTCTCAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DRSRQGPASPLHPCSCSGRGLPS*WGSQAV Trigger: CACTGCCTGAGAACCCCAGCAAGAAGGGAGACCTCT...ACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTCTGCGGAAGCGAGGGTaGAGCTTCTCCTTCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: VGVEWIGAGKAQLALSIPLRKRG*SFSFTM Trigger: CATTGTGAAGGAGAAGCTGCACCCTCGCTTCCGCAG...AGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGGTGCAGCTTCTCCTaGTCCCCTTCCTTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VDRSRQGPASPLHPCSCSGCSFS*SPSFSK Trigger: CTTTGAGAAGGAAGGGGACCAGGAGAAGCTGCACCC...TGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054923.9 |
||
| CDS-3UTR CCA 90 bp | GTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGGTCTCCCTTCTTGCTaGGGTTCTCAGGCAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VEWIGAGKAQLALSIPVPGLPSC*GSQAVA Trigger: TGCCACTGCCTGAGAACCCCAGCAAGAAGGGAGACC...AGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTAAGAAGAGGTTGTCATaGTCCCTGCGGAAGCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVEWIGAGKAQLALSIPVKKRLS*SLRKRG Trigger: CCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTT...AACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| 3UTR CAA 72 bp | GCCTTGCCCAAAGGAATGGGGTACACGAAGAAGAGGTaGTCATGCTCCCTGCGGAAGCGAGGGTGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALPKGMGYTKKR*SCSLRKRGCSF Trigger: GAAGCTGCACCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTCCTTTGGGCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
||
| CDS-3UTR TCA 90 bp | ATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTCTCCGGTATGCCTTCTTaGTCTGGGCATCTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IGAGKAQLALSIPVPAQVSGMPS*SGHLLS Trigger: ACTCAGAAGATGCCCAGATCAAGAAGGCATACCGGA...GACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154516.3 ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTGTCCATGGAGTCTaGGATCCAAACTCTAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGVEWIGAGKAQLALSIPVVHGV*DPNSRG Trigger: TCCCCTAGAGTTTGGATCCCAGACTCCATGGACAAC...AGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | TGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTAGCCAGTTGTCCATaGAGTCTGGGATCCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: WIGAGKAQLALSIPVPAQVASCP*SLGSKL Trigger: GAGTTTGGATCCCAGACTCCATGGACAACTGGCTAC...CTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054923.9 ENSMUST00000154516.3 ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GCCAAGATGGAAGCAAGAAACTCTGAAGCCTCAGGGAACAGTCTGTGCCTAGGAGGGGTTCTCAGGCAGTaGCATCCCCTCACCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AKMEARNSEASGNSLCLGGVLRQ*HPLTWH Trigger: GTGCCAGGTGAGGGGATGCCACTGCCTGAGAACCCC...TCCTAGGCACAGACTGTTCCCTGAGGCTTCAGAGTTTCTTGCTTCCATCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTTGTGAGATGTCAGGAGCAGAAGGACCTTAGAGGTCGCAAAGCCCTGCCTCTTCCTTCTCAAAGGTaGTGCGTGTGCCCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVVRCQEQKDLRGRKALPLPSQR*CVCPAS Trigger: GGAGGCAGGGCACACGCATCACCTTTGAGAAGGAAG...AGGCAGGGCTTTGCGACCTCTAAGGTCCTTCTGCTCCTGACATCTCACAACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTCGGATGTCAAAGAAGATaGAGAGGTCTCCCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IGAGKAQLALSIPVPAQVGCQRR*RGLPSC Trigger: GCAAGAAGGGAGACCTCTTCATCTTCTTTGACATCC...GACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR TCA 90 bp | GAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCTTCTGCTATTTGCTTaGATATCTCTGGTGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: EWIGAGKAQLALSIPVPALLLFA*ISLVHP Trigger: CGGGTGCACCAGAGATATTCAAGCAAATAGCAGAAG...AGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154516.3 ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTGTTGTCCATGGAGTCTaGGATCCAAACTCTAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVEWIGAGKAQLALSIPVVVHGV*DPNSRG Trigger: TCCCCTAGAGTTTGGATCCCAGACTCCATGGACAAC...AACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054923.9 ENSMUST00000154516.3 ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTAGAGGTCTCGTTCAATaGGAGGGTCTTGTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EWIGAGKAQLALSIPVPARGLVQ*EGLVSG Trigger: TCCAGAAACAAGACCCTCCCATTGAACGAGACCTCT...AGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTCCCTTGAAGTACTTAGGGTaGACAATGTCGTTGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSRQGPASPLHPCSCSGPLKYLG*TMSLIG Trigger: CCCTATCAACGACATTGTCCACCCTAAGTACTTCAA...GGGACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGTCAGGAGTTCAAGTGCCCATGTCTCGCAGGCTACTGGTCAGAGGCAGATGATGTTGGGGCCCTaGTCCCCTTCCTTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARVRSSSAHVSQATGQRQMMLGP*SPSFSK Trigger: CTTTGAGAAGGAAGGGGACCAGGGCCCCAACATCAT...CTGCCTCTGACCAGTAGCCTGCGAGACATGGGCACTTGAACTCCTGACTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| 3UTR CAA 72 bp | CCCTGGCTATCCTGGAGCTTGCTCTGTAGACCAGGCTaGTCTCAGAGATCTACCTGCATCTGCCTCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PWLSWSLLCRPG*SQRSTCICLPS Trigger: ACTTGGGAGGCAGATGCAGGTAGATCTCTGAGACAAGCCTGGTCTACAGAGCAAGCTCCAGGATAGCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCCGGTCATCAAGAGTCTTCACCTCCACAGTGCAGCAGGTAAGGGCCTTTCCGGTATGCCTTCTTaGTCTGGGCATCTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EQPVIKSLHLHSAAGKGLSGMPS*SGHLLS Trigger: ACTCAGAAGATGCCCAGATCAAGAAGGCATACCGGA...AAGGCCCTTACCTGCTGCACTGTGGAGGTGAAGACTCTTGATGACCGGCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
||
| CDS-3UTR TCA 90 bp | GTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTCTTCTGCTATTTGCTTaGATATCTCTGGTGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: VEWIGAGKAQLALSIPVPLLLFA*ISLVHP Trigger: CGGGTGCACCAGAGATATTCAAGCAAATAGCAGAAG...AGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154516.3 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | GTGCAAGAGTCAGGAGTTCAAGTGCCCATGTCTCGCAGGCTACTGGTCAGAGGCACACTTTGTCAGGGTTaGCATGGAAGACGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQESGVQVPMSRRLLVRGTLCQG*HGRRSQ Trigger: CTGGCTACGTCTTCCATGGCAACCCTGACAAAGTGT...GCCTCTGACCAGTAGCCTGCGAGACATGGGCACTTGAACTCCTGACTCTTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | ACCTCCACAGTGCAGCAGGTAAGGGCCTTGCCCAAAGGAATGGGGTACACGAAGGTAGCCAGTTGTCCATaGAGTCTGGGATCCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: TSTVQQVRALPKGMGYTKVASCP*SLGSKL Trigger: GAGTTTGGATCCCAGACTCCATGGACAACTGGCTAC...CTTCGTGTACCCCATTCCTTTGGGCAAGGCCCTTACCTGCTGCACTGTGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTTGGCATCCCCTCACCTaGCACAATCTTGAAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: GVEWIGAGKAQLALSIPVWHPLT*HNLEVL Trigger: AAGTACTTCAAGATTGTGCCAGGTGAGGGGATGCCA...AACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTTATGCCTTCTTGATCTaGGCATCTTCTGAGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVEWIGAGKAQLALSIPVYAFLI*ASSELR Trigger: CCGCAACTCAGAAGATGCCCAGATCAAGAAGGCATA...AACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154516.3 ENSMUST00000207405.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGAATGGGGTACACGAAGAAGAGGTTGTCATGCTCCCTGCGGAAGCGAGGGACACTTTGTCAGGGTTaGCATGGAAGACGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGMGYTKKRLSCSLRKRGTLCQG*HGRRSQ Trigger: CTGGCTACGTCTTCCATGGCAACCCTGACAAAGTGT...CCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
||
| CDS-3UTR CCA 90 bp | GTGCAAGAGTCAGGAGTTCAAGTGCCCATGTCTCGCAGGCTACTGGTCAGAGGCAGAGGTCTCGTTCAATaGGAGGGTCTTGTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VQESGVQVPMSRRLLVRGRGLVQ*EGLVSG Trigger: TCCAGAAACAAGACCCTCCCATTGAACGAGACCTCT...GCCTCTGACCAGTAGCCTGCGAGACATGGGCACTTGAACTCCTGACTCTTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGTCAGGAGTTCAAGTGCCCATGTCTCGCAGGCTACTGGTCAGAGGCAGTATGCCTTCTTGATCTaGGCATCTTCTGAGTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ARVRSSSAHVSQATGQRQYAFLI*ASSELR Trigger: CCGCAACTCAGAAGATGCCCAGATCAAGAAGGCATA...CTGCCTCTGACCAGTAGCCTGCGAGACATGGGCACTTGAACTCCTGACTCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| 3UTR CAA 72 bp | AACTGGATGTCAAAGAAGATGAAGAGGTCTCCCTTCTaGCTGGGGTTCTCAGGCAGTGGCATCCCCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NWMSKKMKRSPF*LGFSGSGIPSP Trigger: AGGTGAGGGGATGCCACTGCCTGAGAACCCCAGCAAGAAGGGAGACCTCTTCATCTTCTTTGACATCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
||
| 3UTR CAA 72 bp | AGAAGGACCTTAGAGGTCGCAAAGCCCTGCCTCCTGTaGCCAAGATGGAAGCAAGAAACTCTGAAGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRTLEVAKPCLL*PRWKQETLKPQ Trigger: CTGAGGCTTCAGAGTTTCTTGCTTCCATCTTGGCAACAGGAGGCAGGGCTTTGCGACCTCTAAGGTCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGCCGGTCATCAAGAGTCTTCACCTCCACAGTGCAGCAGGTAAGGGCCTTGATGACTTCAATGGGTaGTTCTTCAGGGCAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQPVIKSLHLHSAAGKGLDDFNG*FFRASF Trigger: GAAACTTGCCCTGAAGAACCACCCATTGAAGTCATC...AAGGCCCTTACCTGCTGCACTGTGGAGGTGAAGACTCTTGATGACCGGCTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
||
| CDS-3UTR CCA 90 bp | GTGCAAGAGTCAGGAGTTCAAGTGCCCATGTCTCGCAGGCTACTGGTCAGAGGCGATGACTTCAATGGGTaGTTCTTCAGGGCAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQESGVQVPMSRRLLVRGDDFNG*FFRASF Trigger: GAAACTTGCCCTGAAGAACCACCCATTGAAGTCATC...GCCTCTGACCAGTAGCCTGCGAGACATGGGCACTTGAACTCCTGACTCTTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGGACAATGTCGTTGATAGGGATGTTGAGCAGCCGGTCATCAAGAGTCTTCGTTGTCCATGGAGTCTaGGATCCAAACTCTAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWTMSLIGMLSSRSSRVFVVHGV*DPNSRG Trigger: TCCCCTAGAGTTTGGATCCCAGACTCCATGGACAAC...GAAGACTCTTGATGACCGGCTGCTCAACATCCCTATCAACGACATTGTCCACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
||
| 3UTR CAA 72 bp | TTCTCAGGCAGTGGCATCCCCTCACCTGGCACAATCTaGAAGTACTTAGGGTGGACAATGTCGTTGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSGSGIPSPGTI*KYLGWTMSLIG Trigger: CCCTATCAACGACATTGTCCACCCTAAGTACTTCAAGATTGTGCCAGGTGAGGGGATGCCACTGCCTGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR CAA 72 bp | AAGTACTTAGGGTGGACAATGTCGTTGATAGGGATGTaGAGCAGCCGGTCATCAAGAGTCTTCACCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KYLGWTMSLIGM*SSRSSRVFTST Trigger: TGTGGAGGTGAAGACTCTTGATGACCGGCTGCTCAACATCCCTATCAACGACATTGTCCACCCTAAGTACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| 3UTR CAA 72 bp | GGCACAATCTTGAAGTACTTAGGGTGGACAATGTCGTaGATAGGGATGTTGAGCAGCCGGTCATCAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTILKYLGWTMS*IGMLSSRSSRV Trigger: GACTCTTGATGACCGGCTGCTCAACATCCCTATCAACGACATTGTCCACCCTAAGTACTTCAAGATTGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| CDS-3UTR GCA 90 bp | GCCAAGATGGAAGCAAGAAACTCTGAAGCCTCAGGGAACAGTCTGTGCCTAGGACACGTCGTAGGCTTCTaGTATTTGCTTGAATATCTC | + |
|
Preference number: 4 (lower is better) Translates to: AKMEARNSEASGNSLCLGHVVGF*YLLEYL Trigger: GAGATATTCAAGCAAATAGCAGAAGCCTACGACGTG...TCCTAGGCACAGACTGTTCCCTGAGGCTTCAGAGTTTCTTGCTTCCATCTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS-3UTR CCA 90 bp | GGGGTCCTGCAGGAAGCATCCCTCCAACTCACTTCCCATCATAGCTATAGGATATTGAAGTACTTAGGGTaGACAATGTCGTTGATAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVLQEASLQLTSHHSYRILKYLG*TMSLIG Trigger: CCCTATCAACGACATTGTCCACCCTAAGTACTTCAA...TATCCTATAGCTATGATGGGAAGTGAGTTGGAGGGATGCTTCCTGCAGGACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS-3UTR GCA 90 bp | GAACTGGATGTCAAAGAAGATGAAGAGGTCTCCCTTCTTGCTGGGGTTCTCAGGCACGTCGTAGGCTTCTaGTATTTGCTTGAATATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELDVKEDEEVSLLAGVLRHVVGF*YLLEYL Trigger: GAGATATTCAAGCAAATAGCAGAAGCCTACGACGTG...CCTGAGAACCCCAGCAAGAAGGGAGACCTCTTCATCTTCTTTGACATCCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| CDS-3UTR CCA 90 bp | CAGGAAGCATCCCTCCAACTCACTTCCCATCATAGCTATAGGATAGGAATCTTTTGGCATCCCCTCACCTaGCACAATCTTGAAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: QEASLQLTSHHSYRIGIFWHPLT*HNLEVL Trigger: AAGTACTTCAAGATTGTGCCAGGTGAGGGGATGCCA...AAAGATTCCTATCCTATAGCTATGATGGGAAGTGAGTTGGAGGGATGCTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | GGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTTCAGCAGGGATGATGTaGGGGCCCTGGTCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVEWIGAGKAQLALSIPVSAGMM*GPWSPS Trigger: GGAAGGGGACCAGGGCCCCAACATCATCCCTGCTGA...AACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS GCA 90 bp | AGGGCCTTGCCCAAAGGAATGGGGTACACGAAGAAGAGGTTGTCATaGTCCCTGCGGAAGCGAGGGTGCAGCTTCTCCTGGTCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RALPKGMGYTKKRLS*SLRKRGCSFSWSPS Trigger: GGAAGGGGACCAGGAGAAGCTGCACCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTCCTTTGGGCAAGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054923.9 |
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| CDS-3UTR CAA 90 bp | TGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGCAGCAGGTAAGGGCCTaGCCCAAAGGAATGGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WIGAGKAQLALSIPVPAQQQVRA*PKGMGY Trigger: GTACCCCATTCCTTTGGGCAAGGCCCTTACCTGCTG...CTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | ATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTCTACACGAAGAAGAGGTaGTCATGCTCCCTGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IGAGKAQLALSIPVPAQVYTKKR*SCSLRK Trigger: CTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTA...GACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | GATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTGGGTGGACAATGTCGTaGATAGGGATGTTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DRSRQGPASPLHPCSCSGGWTMS*IGMLSS Trigger: GCTGCTCAACATCCCTATCAACGACATTGTCCACCC...ACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
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| CDS GCA 90 bp | TGCCCAAAGGAATGGGGTACACGAAGAAGAGGTTGTCATGCTCCCTaGGGAAGCGAGGGTGCAGCTTCTCCTGGTCCCCTTCCTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CPKEWGTRRRGCHAP*GSEGAASPGPLPSQ Trigger: TTGAGAAGGAAGGGGACCAGGAGAAGCTGCACCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTCCTTTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054923.9 |
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| CDS-3UTR CAA 90 bp | GATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGGTAACTCGTGGAACACTTaGTCAGGGTTGCCATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DRSRQGPASPLHPCSCSGNSWNT*SGLPWK Trigger: CTTCCATGGCAACCCTGACAAAGTGTTCCACGAGTT...ACCTGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054923.9 ENSMUST00000154516.3 ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | GTGGGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTTCGTTGATAGGGATGTaGAGCAGCCGGTCATCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGVEWIGAGKAQLALSIPSLIGM*SSRSSR Trigger: TCTTGATGACCGGCTGCTCAACATCCCTATCAACGA...AGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | GAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTTTCCGGTATGCCTTCTaGATCTGGGCATCTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: EWIGAGKAQLALSIPVPAFRYAF*IWASSE Trigger: CTCAGAAGATGCCCAGATCAAGAAGGCATACCGGAA...AGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154516.3 ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | GCAAGAGTCAGGAGTTCAAGTGCCCATGTCTCGCAGGCTACTGGTCAGAGGCAGTACACGAAGAAGAGGTaGTCATGCTCCCTGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARVRSSSAHVSQATGQRQYTKKR*SCSLRK Trigger: CTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTA...CTGCCTCTGACCAGTAGCCTGCGAGACATGGGCACTTGAACTCCTGACTCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGCCGGTCATCAAGAGTCTTCACCTCCACAGTGCAGCAGGTAAGGGCCTTAACTCGTGGAACACTTaGTCAGGGTTGCCATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EQPVIKSLHLHSAAGKGLNSWNT*SGLPWK Trigger: CTTCCATGGCAACCCTGACAAAGTGTTCCACGAGTT...AAGGCCCTTACCTGCTGCACTGTGGAGGTGAAGACTCTTGATGACCGGCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| CDS-3UTR CAA 90 bp | GCCAAGATGGAAGCAAGAAACTCTGAAGCCTCAGGGAACAGTCTGTGCCTAGGACAGCAGGTAAGGGCCTaGCCCAAAGGAATGGGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AKMEARNSEASGNSLCLGQQVRA*PKGMGY Trigger: GTACCCCATTCCTTTGGGCAAGGCCCTTACCTGCTG...TCCTAGGCACAGACTGTTCCCTGAGGCTTCAGAGTTTCTTGCTTCCATCTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | GTGGGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTCAGGATCTTGTCCTaGATGGTAGAAGAATATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VGVEWIGAGKAQLALSIPVRILS*MVEEYL Trigger: CAGATATTCTTCTACCATCAAGGACAAGATCCTGAC...AGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | GTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTCCTGCTCAGTCAGGATCTTGTCCTaGATGGTAGAAGAATATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VDRSRQGPASPLHPCSCSVRILS*MVEEYL Trigger: CAGATATTCTTCTACCATCAAGGACAAGATCCTGAC...TGAGCAGGAACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | GGAGTTGAGTGGATAGGAGCAGGCAAGGCCCAGCTAGCCCTCTCCATCCCTGTTTCGATGGTCAGGATCTaGTCCTTGATGGTAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GVEWIGAGKAQLALSIPVSMVRI*SLMVEE Trigger: TTCTTCTACCATCAAGGACAAGATCCTGACCATCGA...AACAGGGATGGAGAGGGCTAGCTGGGCCTTGCCTGCTCCTATCCACTCAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
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| CDS TCA 90 bp | CTTCAGGGCAAGTTTCCGGTATGCCTTCTTGATCTGGGCATCTTCTaGGTTGCGGGTGACCTGAAGCACAGCATAGTAATCCAGCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LQGKFPVCLLDLGIF*VAGDLKHSIVIQPH Trigger: ATGGGGCTGGATTACTATGCTGTGCTTCAGGTCACCCGCAACTCAGAAGATGCCCAGATCAAGAAGGCATACCGGAAACTTGCCCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000154516.3 ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | TCTGTTGTGAGATGTCAGGAGCAGAAGGACCTTAGAGGTCGCAAAGCCCTGCCTTCGTTGATAGGGATGTaGAGCAGCCGGTCATCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVVRCQEQKDLRGRKALPSLIGM*SSRSSR Trigger: TCTTGATGACCGGCTGCTCAACATCCCTATCAACGA...AGGCAGGGCTTTGCGACCTCTAAGGTCCTTCTGCTCCTGACATCTCACAACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS CCA 90 bp | TGCTTGAATATCTCTGGTGCACCCGGCTCAGATGACTTCAATGGGTaGTTCTTCAGGGCAAGTTTCCGGTATGCCTTCTTGATCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLNISGAPGSDDFNG*FFRASFRYAFLIWA Trigger: TGCCCAGATCAAGAAGGCATACCGGAAACTTGCCCTGAAGAACCACCCATTGAAGTCATCTGAGCCGGGTGCACCAGAGATATTCAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154516.3 ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | TCTGTTGTGAGATGTCAGGAGCAGAAGGACCTTAGAGGTCGCAAAGCCCTGCCTTCGATGGTCAGGATCTaGTCCTTGATGGTAGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SVVRCQEQKDLRGRKALPSMVRI*SLMVEE Trigger: TTCTTCTACCATCAAGGACAAGATCCTGACCATCGA...AGGCAGGGCTTTGCGACCTCTAAGGTCCTTCTGCTCCTGACATCTCACAACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | GAACTGGATGTCAAAGAAGATGAAGAGGTCTCCCTTCTTGCTGGGGTTCTCAGGTTCCGGTATGCCTTCTaGATCTGGGCATCTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ELDVKEDEEVSLLAGVLRFRYAF*IWASSE Trigger: CTCAGAAGATGCCCAGATCAAGAAGGCATACCGGAA...CCTGAGAACCCCAGCAAGAAGGGAGACCTCTTCATCTTCTTTGACATCCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| CDS-3UTR CAA 90 bp | GGGTGGACAATGTCGTTGATAGGGATGTTGAGCAGCCGGTCATCAAGAGTCTTCGCTTCTGCTATTTGCTaGAATATCTCTGGTGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: GWTMSLIGMLSSRSSRVFASAIC*NISGAP Trigger: GGGTGCACCAGAGATATTCAAGCAAATAGCAGAAGC...GAAGACTCTTGATGACCGGCTGCTCAACATCCCTATCAACGACATTGTCCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154516.3 |
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| CDS-3UTR CAA 90 bp | GCCAAGATGGAAGCAAGAAACTCTGAAGCCTCAGGGAACAGTCTGTGCCTAGGAGCTTCTGCTATTTGCTaGAATATCTCTGGTGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: AKMEARNSEASGNSLCLGASAIC*NISGAP Trigger: GGGTGCACCAGAGATATTCAAGCAAATAGCAGAAGC...TCCTAGGCACAGACTGTTCCCTGAGGCTTCAGAGTTTCTTGCTTCCATCTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | TTGATCCCAAGGGTTTGGGGACAGCAGGGACAAGACTGTATGTGTTCAAAAGTAGGGTGGACAATGTCGTaGATAGGGATGTTGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LIPRVWGQQGQDCMCSKVGWTMS*IGMLSS Trigger: GCTGCTCAACATCCCTATCAACGACATTGTCCACCC...TACTTTTGAACACATACAGTCTTGTCCCTGCTGTCCCCAAACCCTTGGGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCATCCCTCCAACTCACTTCCCATCATAGCTATAGGATAGGAATCTTTAACTCGTGGAACACTTaGTCAGGGTTGCCATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QEASLQLTSHHSYRIGIFNSWNT*SGLPWK Trigger: CTTCCATGGCAACCCTGACAAAGTGTTCCACGAGTT...AAAGATTCCTATCCTATAGCTATGATGGGAAGTGAGTTGGAGGGATGCTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207405.2 |
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| CDS CAA 90 bp | CAGGTAAGGGCCTTGCCCAAAGGAATGGGGTACACGAAGAAGAGGTaGTCATGCTCCCTGCGGAAGCGAGGGTGCAGCTTCTCCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QVRALPKGMGYTKKR*SCSLRKRGCSFSWS Trigger: GGACCAGGAGAAGCTGCACCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTCCTTTGGGCAAGGCCCTTACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054923.9 |
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| CDS GCA 72 bp | GAATGGGGTACACGAAGAAGAGGTTGTCATGCTCCCTaGGGAAGCGAGGGTGCAGCTTCTCCTGGTCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EWGTRRRGCHAP*GSEGAASPGPL Trigger: AAGGGGACCAGGAGAAGCTGCACCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054923.9 |
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| CDS GCA 72 bp | CCCAAAGGAATGGGGTACACGAAGAAGAGGTTGTCATaGTCCCTGCGGAAGCGAGGGTGCAGCTTCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PKGMGYTKKRLS*SLRKRGCSFSW Trigger: CCAGGAGAAGCTGCACCCTCGCTTCCGCAGGGAGCATGACAACCTCTTCTTCGTGTACCCCATTCCTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054923.9 |
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| CDS CAA 90 bp | ACTCGTGGAACACTTTGTCAGGGTTGCCATGGAAGACGTAGCCAGTaGTCCATGGAGTCTGGGATCCAAACTCTAGGGGAATCCCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: TRGTLCQGCHGRRSQ*SMESGIQTLGESHP Trigger: AGGGTGGGATTCCCCTAGAGTTTGGATCCCAGACTCCATGGACAACTGGCTACGTCTTCCATGGCAACCCTGACAAAGTGTTCCACGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054923.9 ENSMUST00000154516.3 ENSMUST00000207405.2 |
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| CDS CCA 72 bp | ATCTCTGGTGCACCCGGCTCAGATGACTTCAATGGGTaGTTCTTCAGGGCAAGTTTCCGGTATGCCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISGAPGSDDFNG*FFRASFRYAFL Trigger: CAAGAAGGCATACCGGAAACTTGCCCTGAAGAACCACCCATTGAAGTCATCTGAGCCGGGTGCACCAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154516.3 ENSMUST00000207405.2 |
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| CDS CCA 72 bp | ATAAGTCCTCAAGGGACAGATAGAGGTCTCGTTCAATaGGAGGGTCTTGTTTCTGGACGCCTCTGCCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ISPQGTDRGLVQ*EGLVSGRLCPK Trigger: TTTGGGGCAGAGGCGTCCAGAAACAAGACCCTCCCATTGAACGAGACCTCTATCTGTCCCTTGAGGACTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
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| CDS CAA 90 bp | CCCTGCCTCCATCCAGGTCTCACATCGATGGTCAGGATCTTGTCCTaGATGGTAGAAGAATATCTGTCTTCATTTAGTACCCTTCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PCLHPGLTSMVRILS*MVEEYLSSFSTLRE Trigger: CTCCCGAAGGGTACTAAATGAAGACAGATATTCTTCTACCATCAAGGACAAGATCCTGACCATCGATGTGAGACCTGGATGGAGGCAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
||
| CDS TCA 72 bp | AAGTTTCCGGTATGCCTTCTTGATCTGGGCATCTTCTaGGTTGCGGGTGACCTGAAGCACAGCATAGTAATC | + |
|
Preference number: 6 (lower is better) Translates to: KFPVCLLDLGIF*VAGDLKHSIVI Trigger: GATTACTATGCTGTGCTTCAGGTCACCCGCAACTCAGAAGATGCCCAGATCAAGAAGGCATACCGGAAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154516.3 ENSMUST00000207405.2 |
||
| CDS TCA 72 bp | TATTTGCTTGAATATCTCTGGTGCACCCGGCTCAGATaGCTTCAATGGGTGGTTCTTCAGGGCAAGTTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: YLLEYLWCTRLR*LQWVVLQGKFP Trigger: CGGAAACTTGCCCTGAAGAACCACCCATTGAAGTCATCTGAGCCGGGTGCACCAGAGATATTCAAGCAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154516.3 ENSMUST00000207405.2 |
||
| CDS CAA 72 bp | CATCCAGGTCTCACATCGATGGTCAGGATCTTGTCCTaGATGGTAGAAGAATATCTGTCTTCATTTAGTACC | + |
|
Preference number: 6 (lower is better) Translates to: HPGLTSMVRILS*MVEEYLSSFST Trigger: GGTACTAAATGAAGACAGATATTCTTCTACCATCAAGGACAAGATCCTGACCATCGATGTGAGACCTGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054923.9 ENSMUST00000207405.2 |
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