Pregenerated sensors for DNAJB12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020109Ensembl transcript IDs: ENSMUST00000020309.7, ENSMUST00000131810.8, ENSMUST00000142819.8, ENSMUST00000146590.8, ENSMUST00000147914.8
Found 237 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCCGGTGGGCCCACTGTGGAGTGAAGACAGGCGCTCACAGCACTaGCTCTCCACAAGCTGGGCTGCACTCAGGGCCTGGCTCAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: SPVGPLWSEDRRSQH*LSTSWAALRAWLSS Trigger: AGAGCTGAGCCAGGCCCTGAGTGCAGCCCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCCCACCGGGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR GCA 90 bp | CCAGGTTCCCTCCCTCCATCCTCTGCCCATGACCAAGGCCAAGGCTaGCAGGAGTTGCAGCAAAGAAGCAGTCCTGGCTCATACTTGGAC | + |
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Preference number: 1 (lower is better) Translates to: PGSLPPSSAHDQGQG*QELQQRSSPGSYLD Trigger: GTCCAAGTATGAGCCAGGACTGCTTCTTTGCTGCAACTCCTGGCAGCCTTGGCCTTGGTCATGGGCAGAGGATGGAGGGAGGGAACCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| 3UTR CCA 90 bp | GTAGTGGATTCTTCATCCAATGAGTGGAGCCCGGTGGGCCCACTGTaGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: VVDSSSNEWSPVGPL*SEDRRSQHWLSTSW Trigger: CCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCCCACCGGGCTCCACTCATTGGATGAAGAATCCACTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR CCA 90 bp | AATGGGGCTGGGGGAGGTGCCCAGAACTGCCTCGTCTCTGGAGGTTaGAAGTGTGAGGATGGTGAGTCTCTGCCATCATCACCAGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: NGAGGGAQNCLVSGG*KCEDGESLPSSPGS Trigger: GGAACCTGGTGATGATGGCAGAGACTCACCATCCTCACACTTCCAACCTCCAGAGACGAGGCAGTTCTGGGCACCTCCCCCAGCCCCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| 3UTR GCA 90 bp | TCCTTGGTGCGCAACTTAGAAAACCTGTTGGCAATGGTGGAGCTGTaGCCTGTGGCACCTGTAAGGCAAACCCACCTGGGGACTTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: SLVRNLENLLAMVEL*PVAPVRQTHLGTWV Trigger: CACCCAAGTCCCCAGGTGGGTTTGCCTTACAGGTGCCACAGGGCACAGCTCCACCATTGCCAACAGGTTTTCTAAGTTGCGCACCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR CCA 90 bp | TGTCAGTTACCACCTCTGGGCTGGCAGCTTGGGGAAGTAAGGCTTTaGAAGTCTGTAGGTGATCGGCACACCCGTGGCCAGAGGAAAACT | + |
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Preference number: 1 (lower is better) Translates to: CQLPPLGWQLGEVRL*KSVGDRHTRGQRKT Trigger: AGTTTTCCTCTGGCCACGGGTGTGCCGATCACCTACAGACTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCCAGAGGTGGTAACTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR CCA 90 bp | GCATTTCTAAGTTACGTTCTCTGGAATTCTCTCCTCTCTGTTCCTTaGCCCATGCCTCAGCCTGATTTCTCCTTGAGTGACTGGTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: AFLSYVLWNSLLSVP*PMPQPDFSLSDWWQ Trigger: CTGCCACCAGTCACTCAAGGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAGAGAATTCCAGAGAACGTAACTTAGAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR GCA 90 bp | CCTTCCCCACAGACATTTGCTGCAAGTTTTACATTCTACTTTCGTTaGCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: PSPQTFAASFTFYFR*HGFGILGASDAELL Trigger: AAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGCAGCAAATGTCTGTGGGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGCCCATGCCTCAGCCTGATTTCTCCTTGAGTGACTGGTGGCAGCTCAGGGGCGGCGAGCCCACCTaGGGCTGGCCAGAGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PWPMPQPDFSLSDWWQLRGGEPT*GWPERR Trigger: CCTCCTCTCTGGCCAGCCTCAGGTGGGCTCGCCGCC...CCTGAGCTGCCACCAGTCACTCAAGGAGAAATCAGGCTGAGGCATGGGCCAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGCATCCCATTCGTTAGGGGGTTGTATGAGAGAGACACCCTTGGTGGGGGTGCAGGGCTCCCGGGCATaGGGGCGGCGAGCCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: QASHSLGGCMRETPLVGVQGSRA*GRRAHL Trigger: CAGGTGGGCTCGCCGCCCTCATGCCCGGGAGCCCTG...CACCCCCACCAAGGGTGTCTCTCTCATACAACCCCCTAACGAATGGGATGCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGCCCACTGTGGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCAGGGGCACCATTCCCTaGCCCAGGCTCTTCCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: VGPLWSEDRRSQHWLSTSRGTIP*PRLFPY Trigger: GTAGGGGAAGAGCCTGGGGCAGGGAATGGTGCCCCT...GCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGCTCACAGCACTGGCTCTCCACAAGCTGGGCTGCACTCAGGGCCTGGCTCAACCTGTTGGCAATGGTaGAGCTGTGCCCTGTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GAHSTGSPQAGLHSGPGSTCWQW*SCALWH Trigger: GTGCCACAGGGCACAGCTCCACCATTGCCAACAGGT...TGAGCCAGGCCCTGAGTGCAGCCCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGCTTCCTTTCCCAGCAAGCATCCCATTCGTTAGGGGGTTGTATGAGAGACAGGGCTCCCGGGCATaGGGGCGGCGAGCCCACCTG | + |
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Preference number: 2 (lower is better) Translates to: TKLPFPASIPFVRGLYERQGSRA*GRRAHL Trigger: CAGGTGGGCTCGCCGCCCTCATGCCCGGGAGCCCTG...TCTCTCATACAACCCCCTAACGAATGGGATGCTTGCTGGGAAAGGAAGCTTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGGGGAGGTGCCCAGAACTGCCTCGTCTCTGGAGGTTGGAAGTGTGAGGATTCCATCCTCTGCCCATaGCCAAGGCCAAGGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: AGGGAQNCLVSGGWKCEDSILCP*PRPRLP Trigger: TGGCAGCCTTGGCCTTGGTCATGGGCAGAGGATGGA...ATCCTCACACTTCCAACCTCCAGAGACGAGGCAGTTCTGGGCACCTCCCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGTTGAACCTCCTCCTTCCCCTGGCAGCAATGGCTGTTTTGATAAAGAGCGGGCAGGGGAGTGGCTaGAGGGCTCCCGGGCATGAG | + |
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Preference number: 2 (lower is better) Translates to: EELNLLLPLAAMAVLIKSGQGSG*RAPGHE Trigger: CTCATGCCCGGGAGCCCTGCAGCCACTCCCCTGCCC...GCTCTTTATCAAAACAGCCATTGCTGCCAGGGGAAGGAGGAGGTTCAACTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGCCCACTGTGGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCGAGAGAGGATGGCTGTaGGGTGTTTGGCTTCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: VGPLWSEDRRSQHWLSTSERGWL*GVWLPV Trigger: AACTGGAAGCCAAACACCGCACAGCCATCCTCTCTC...GCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTCCTAGCCCGCCATCACCCTGGTTGTCTCTGCGGTCTTGCCTCTGCTGGTAGGGATTTCATAGTCTaGGTGGTGTGGCTGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: TLLARHHPGCLCGLASAGRDFIV*VVWLAQ Trigger: CTGGGCCAGCCACACCACCCAGACTATGAAATCCCT...ACCAGCAGAGGCAAGACCGCAGAGACAACCAGGGTGATGGCGGGCTAGGAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCACTGTGGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCTGGCTGTCTGAGAGAGGATaGCTGTGCGGTGTTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GPLWSEDRRSQHWLSTSWLSERG*LCGVWL Trigger: AAGCCAAACACCGCACAGCCATCCTCTCTCAGACAG...CCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGCAGCTTGAGGAGCTGGCCCCATCCCAGAGGGCTTTGTCTGGGATCTCTCTCCTCTCTGTTCCTTaGCCCATGCCTCAGCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: RRQLEELAPSQRALSGISLLSVP*PMPQPD Trigger: ATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAG...AGAGATCCCAGACAAAGCCCTCTGGGATGGGGCCAGCTCCTCAAGCTGCCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCCACTGTGGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCTGGAAAACCTGTTGGCAATaGTGGAGCTGTGCCCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GPLWSEDRRSQHWLSTSWKTCWQ*WSCALW Trigger: CCACAGGGCACAGCTCCACCATTGCCAACAGGTTTT...CCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCATCCTCTGCCCATGACCAAGGCCAAGGCTGCCAGGAGTTGCAGCAAAGAAGCTCATACTTGGACCTaGGTGGTGTGGCTGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LHPLPMTKAKAARSCSKEAHTWT*VVWLAQ Trigger: CTGGGCCAGCCACACCACCCAGGTCCAAGTATGAGC...TTCTTTGCTGCAACTCCTGGCAGCCTTGGCCTTGGTCATGGGCAGAGGATGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCACAGGTCCTCACTCTGCCTGGCTTCTGCCCCCGAATCCTTGCAGCCCTGGGCAAAGAAGCAGTCCTaGCTCATACTTGGACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: KHRSSLCLASAPESLQPWAKKQS*LILGPG Trigger: CCCAGGTCCAAGTATGAGCCAGGACTGCTTCTTTGC...CCAGGGCTGCAAGGATTCGGGGGCAGAAGCCAGGCAGAGTGAGGACCTGTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| 3UTR-3UTR TCA 90 bp | GGCGCTCACAGCACTGGCTCTCCACAAGCTGGGCTGCACTCAGGGCCTGGCTCAGGATTTATACCACCATaGTTACTGCTGCCATCAGTC | + |
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Preference number: 2 (lower is better) Translates to: GAHSTGSPQAGLHSGPGSGFIPP*LLLPSV Trigger: GACTGATGGCAGCAGTAATCATGGTGGTATAAATCC...TGAGCCAGGCCCTGAGTGCAGCCCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTCCGTGGCTGTGGCCGTaGCGGGCAGCCTGGCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: CLSVLRAFCIHCLREDGCPWLWP*RAAWLL Trigger: CAAGAGCCAGGCTGCCCGGCACGGCCACAGCCACGG...ACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
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| 3UTR-3UTR GCA 90 bp | CGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTGCCTGCCACCCTGGTTGTCTCTaGGGTCTTGCCTCTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RCHGFGILGASDAELLACHPGCL*GLASAG Trigger: ACCAGCAGAGGCAAGACCGCAGAGACAACCAGGGTG...GCAGGCAAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTCCTAGCCCGCCATCACCCTGGTTGTCTCTGCGGTCTTGCCTCTGCTGGTGTCCATCACTGTGGCTaGCTCAGTGTGTGTCACCAA | + |
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Preference number: 2 (lower is better) Translates to: TLLARHHPGCLCGLASAGVHHCG*LSVCHQ Trigger: TTGGTGACACACACTGAGCCAGCCACAGTGATGGAC...ACCAGCAGAGGCAAGACCGCAGAGACAACCAGGGTGATGGCGGGCTAGGAGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGCAGCTTGAGGAGCTGGCCCCATCCCAGAGGGCTTTGTCTGGGATCTCTCTGTCTGAGAGAGGATaGCTGTGCGGTGTTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: RRQLEELAPSQRALSGISLSERG*LCGVWL Trigger: AAGCCAAACACCGCACAGCCATCCTCTCTCAGACAG...AGAGATCCCAGACAAAGCCCTCTGGGATGGGGCCAGCTCCTCAAGCTGCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | CCACTGTGGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCTGGGCTCTGTCTGAGAGAGGATaGCTGTGCGGTGTTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: PLWSEDRRSQHWLSTSWALSERG*LCGVWL Trigger: AAGCCAAACACCGCACAGCCATCCTCTCTCAGACAG...AGCCCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGCCCATGCCTCAGCCTGATTTCTCCTTGAGTGACTGGTGGCAGCTCAGGTTCTCCTTGAGTGACTaGTGGCAGCTCAGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PWPMPQPDFSLSDWWQLRFSLSD*WQLREE Trigger: CTCCTCCCTGAGCTGCCACCAGTCACTCAAGGAGAA...CCTGAGCTGCCACCAGTCACTCAAGGAGAAATCAGGCTGAGGCATGGGCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTAAGGGCGCGGAGCTTCTTGCCTaGCCTGGGAGAGGAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: WIYTTMITAAISQAGAKGAELLA*PGRGGS Trigger: GCTTCCTCCTCTCCCAGGGCAGGCAAGAAGCTCCGC...GCCCTTAGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR GCA 90 bp | CCACTGTGGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCTGGGCTTACCACCATGATTACTaGTGCCATCAGTCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: PLWSEDRRSQHWLSTSWAYHHDY*CHQSGW Trigger: CCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTA...AGCCCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTAAGGGCGCTTCTTGCCTGCCCTaGGAGAGGAGGAAGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: WIYTTMITAAISQAGAKGASCLP*ERRKQP Trigger: GGGCTGCTTCCTCCTCTCCCAGGGCAGGCAAGAAGC...GCCCTTAGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCCCATTCGTTAGGGGGTTGTATGAGAGAGACACCCTTGGTGGGGGTGGGGTGGCCAGAGGAAAACTaGGGGAAACGGCAATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ASHSLGGCMRETPLVGVGWPEEN*GKRQFP Trigger: TGGGAATTGCCGTTTCCCCCAGTTTTCCTCTGGCCA...CCCCACCCCCACCAAGGGTGTCTCTCTCATACAACCCCCTAACGAATGGGATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTCTTATTGCACATGGCTCAGCCACTGGACAGGTGGGGTaGCAGGGGCAGAGCACCAGG | + |
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Preference number: 2 (lower is better) Translates to: QLLRGSFRICVLIAHGSATGQVG*QGQSTR Trigger: CCTGGTGCTCTGCCCCTGCCACCCCACCTGTCCAGT...GGCTGAGCCATGTGCAATAAGAACACAGATCCTAAAGGATCCCCTGAGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTTTGATTACTGGAGTAGTCGAGGAAGCACAGGTCCTCACTCTGCCTGGCGTCCTGGCTCATACTTaGACCTGGGTGGTGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GGLITGVVEEAQVLTLPGVLAHT*TWVVWL Trigger: CAGCCACACCACCCAGGTCCAAGTATGAGCCAGGAC...GCCAGGCAGAGTGAGGACCTGTGCTTCCTCGACTACTCCAGTAATCAAACCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| 3UTR-3UTR TCA 90 bp | AAGACCAATTTGACAATTCCTAACCAAGCTTCCTTTCCCAGCAAGCATCCCATTGGCGGCGAGCCCACCTaGGGCTGGCCAGAGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KTNLTIPNQASFPSKHPIGGEPT*GWPERR Trigger: CCTCCTCTCTGGCCAGCCTCAGGTGGGCTCGCCGCC...AATGGGATGCTTGCTGGGAAAGGAAGCTTGGTTAGGAATTGTCAAATTGGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR GCA 90 bp | CGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTGCCTGCGAGAGAGGATGGCTGTaGGGTGTTTGGCTTCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: RCHGFGILGASDAELLACERGWL*GVWLPV Trigger: AACTGGAAGCCAAACACCGCACAGCCATCCTCTCTC...GCAGGCAAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCGCTTCTTGCCTGCCCTaGGAGAGGAGGAAGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SVCPKSFLHSLSERGWLCASCLP*ERRKQP Trigger: GGGCTGCTTCCTCCTCTCCCAGGGCAGGCAAGAAGC...GCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTCGGTGGAAGTCCCCGTaGCTGTGGCCGTGCCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ASFTFYFRCHGFGILGASRWKSP*LWPCRA Trigger: TGCCCGGCACGGCCACAGCCACGGGGACTTCCACCG...ACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCGCCTCAAAGCCTCGGTaGAAGTCCCCGTGGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SVCPKSFLHSLSERGWLCASKPR*KSPWLW Trigger: CCACAGCCACGGGGACTTCCACCGAGGCTTTGAGGC...GCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGCCCCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAAGTCTGTTCCTTGGCCCATaGCTCAGCCTGATTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PAPGSSPTLTISLETFASLFLGP*LSLISP Trigger: AGGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAG...ACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGGGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGCCCATGCCTCAGCCTGATTTCTCCTTGAGTGACTGGTGGCAGCTCAGGCTACTTTCGTTGCCATaGTTTCGGTATCCTAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: PWPMPQPDFSLSDWWQLRLLSLP*FRYPRS Trigger: GCTCCTAGGATACCGAAACCATGGCAACGAAAGTAG...CCTGAGCTGCCACCAGTCACTCAAGGAGAAATCAGGCTGAGGCATGGGCCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCTATGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTGCGGAGCTTCTTGCCTaGCCTGGGAGAGGAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: FLWIYTTMITAAISQAGAAELLA*PGRGGS Trigger: GCTTCCTCCTCTCCCAGGGCAGGCAAGAAGCTCCGC...AGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCATAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTCTTATTGCACATGGCTCAGCCGCAATGGTGGAGCTGTaGCCTGTGGCACCTGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: QLLRGSFRICVLIAHGSAAMVEL*PVAPVR Trigger: CCTTACAGGTGCCACAGGGCACAGCTCCACCATTGC...GGCTGAGCCATGTGCAATAAGAACACAGATCCTAAAGGATCCCCTGAGAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCAGGGATTTCATAGTCTaGGTGGTGTGGCTGGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SVCPKSFLHSLSERGWLCRDFIV*VVWLAQ Trigger: CTGGGCCAGCCACACCACCCAGACTATGAAATCCCT...GCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCTGCCCCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCACTACTTTCGTTGCCATaGTTTCGGTATCCTAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FPAPGSSPTLTISLETFALLSLP*FRYPRS Trigger: GCTCCTAGGATACCGAAACCATGGCAACGAAAGTAG...TGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGGGGCAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTCTTATTGCACATGGCTCAGCCTTACCACCTCTGGGCTaGCAGCTTGGGGAAGTAAGG | + |
|
Preference number: 2 (lower is better) Translates to: QLLRGSFRICVLIAHGSALPPLG*QLGEVR Trigger: CCTTACTTCCCCAAGCTGCCAGCCCAGAGGTGGTAA...GGCTGAGCCATGTGCAATAAGAACACAGATCCTAAAGGATCCCCTGAGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR TCA 90 bp | CTATGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTAAGTCTGCATTCACTGTCTaGGAGAGGATGGCTGTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: LWIYTTMITAAISQAGAKSAFTV*ERMAVR Trigger: CCGCACAGCCATCCTCTCTCAGACAGTGAATGCAGA...CTTAGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTCTTATTGCACATGGCTCAGCCCTACTGTCTAGCTTGTaGAAACCAGGCTGCCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: QLLRGSFRICVLIAHGSALLSSL*KPGCLP Trigger: GGGAAGGCAGCCTGGTTTTCACAAGCTAGACAGTAG...GGCTGAGCCATGTGCAATAAGAACACAGATCCTAAAGGATCCCCTGAGAAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | TACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTGAGAGAGGATGGCTGTaGGGTGTTTGGCTTCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: YFRCHGFGILGASDAELLERGWL*GVWLPV Trigger: AACTGGAAGCCAAACACCGCACAGCCATCCTCTCTC...AAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCCTGTTCCTTGGCCCATaGCTCAGCCTGATTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SVCPKSFLHSLSERGWLCLFLGP*LSLISP Trigger: AGGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAG...GCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCCATGCCTCAGCCTGATTTCTCCCTACTTTCGTTGCCATaGTTTCGGTATCCTAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LWNSLLSVPWPMPQPDFSLLSLP*FRYPRS Trigger: GCTCCTAGGATACCGAAACCATGGCAACGAAAGTAG...GGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAGAGAATTCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCACACCCAGTTATTATTATCTCTCTAGGCCAGGGTGGCCACTTCATTGCAGGAGGGATTTCATAGTTTaGACCTGGGTGGTGTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PTPSYYYLSRPGWPLHCRRDFIV*TWVVWL Trigger: CAGCCACACCACCCAGGTCCAAACTATGAAATCCCT...CCTGCAATGAAGTGGCCACCCTGGCCTAGAGAGATAATAATAACTGGGTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146590.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCTCTGCATTCACTGTCTaGGAGAGGATGGCTGTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: AASFTFYFRCHGFGILGASAFTV*ERMAVR Trigger: CCGCACAGCCATCCTCTCTCAGACAGTGAATGCAGA...GGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | GCATCCCATTCGTTAGGGGGTTGTATGAGAGAGACACCCTTGGTGGGGGTGGGGCCCACAGACATTTGCTaGAAGTTTTACATTCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: ASHSLGGCMRETPLVGVGPTDIC*KFYILL Trigger: AAGTAGAATGTAAAACTTGCAGCAAATGTCTGTGGG...CCCCACCCCCACCAAGGGTGTCTCTCTCATACAACCCCCTAACGAATGGGATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTGGCCCATGCCTCAGCCTGATTTCTCCTTGAGTGACTGGTGGCAGCTCAGGTTCCCCACAGACATTTaGTGCAAGTTTTACATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: PWPMPQPDFSLSDWWQLRFPTDI*CKFYIL Trigger: TAGAATGTAAAACTTGCAGCAAATGTCTGTGGGGAA...CCTGAGCTGCCACCAGTCACTCAAGGAGAAATCAGGCTGAGGCATGGGCCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGTCCATCACTGTGGCTaGCTCAGTGTGTGTCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: CLSVLRAFCIHCLREDGCVHHCG*LSVCHQ Trigger: TTGGTGACACACACTGAGCCAGCCACAGTGATGGAC...ACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTTACAGTCCATCACTGTaGCTGGCTCAGTGTGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: YFRCHGFGILGASDAELLYSPSL*LAQCVS Trigger: TGACACACACTGAGCCAGCCACAGTGATGGACTGTA...AAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCTACAGTCCATCACTGTaGCTGGCTCAGTGTGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SVCPKSFLHSLSERGWLCYSPSL*LAQCVS Trigger: TGACACACACTGAGCCAGCCACAGTGATGGACTGTA...GCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAAGTTTTCTATACCACCATGATTACTaGTGCCATCAGTCAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PGSSPTLTISLETFASFLYHHDY*CHQSGW Trigger: CCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTA...TAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAACCATAAGCCTGGAGACCTTTGCAAGTTTTCTATGGATTTATACCACCATGGCTTCTTGCCTGCCCTaGGAGAGGAGGAAGCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LTISLETFASFLWIYTTMASCLP*ERRKQP Trigger: GGGCTGCTTCCTCCTCTCCCAGGGCAGGCAAGAAGC...CATGGTGGTATAAATCCATAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCTGCCCCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCACTAAGTTACGTTCTCTaGAATTCTCTCCTCTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FPAPGSSPTLTISLETFALSYVL*NSLLSV Trigger: AACAGAGAGGAGAGAATTCCAGAGAACGTAACTTAG...TGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGGGGCAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTAGACATGAACGTTACTaGAAGGAAAGCCGCCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: YFRCHGFGILGASDAELLRHERY*KESRHQ Trigger: TTGGTGGCGGCTTTCCTTCCAGTAACGTTCATGTCT...AAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTAATTCTGCATTCACTGTCTaGGAGAGGATGGCTGTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: PKQAPFSKLWSKSAEHLNSAFTV*ERMAVR Trigger: CCGCACAGCCATCCTCTCTCAGACAGTGAATGCAGA...ATTAAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | ATACGCATTTCTAAGTTACGTTCTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCCTGTCTGAGAGAGGATaGCTGTGCGGTGTTTGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: IRISKLRSLEFSPLCSLALSERG*LCGVWL Trigger: AAGCCAAACACCGCACAGCCATCCTCTCTCAGACAG...GGCCAAGGAACAGAGAGGAGAGAATTCCAGAGAACGTAACTTAGAAATGCGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTATTCTCCTTGAGTGACTaGTGGCAGCTCAGGGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FPNRPRFLNYGASQLNILFSLSD*WQLREE Trigger: CTCCTCCCTGAGCTGCCACCAGTCACTCAAGGAGAA...TAAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTACTCCTCTCTGTTCCTTaGCCCATGCCTCAGCCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: FPNRPRFLNYGASQLNILLLSVP*PMPQPD Trigger: ATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAG...TAAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCGTATGCTGTCGGCTACGGCTACTGTCTAGCTTGTGAAAACCAGGCTGCCCTAAGTTACGTTCTCTaGAATTCTCTCCTCTCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FPYAVGYGYCLACENQAALSYVL*NSLLSV Trigger: AACAGAGAGGAGAGAATTCCAGAGAACGTAACTTAG...GGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTAGCCGACAGCATACGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCGGCGACACTAATATCTaGTTTGACTTTCCGTATGCT | + |
|
Preference number: 2 (lower is better) Translates to: SVCPKSFLHSLSERGWLCGDTNI*FDFPYA Trigger: AGCATACGGAAAGTCAAATCAGATATTAGTGTCGCC...GCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | TATGCTGTCGGCTACGGCTACTGTCTAGCTTGTGAAAACCAGGCTGCCTTCCCACCCACAGACATTTGCTaGAAGTTTTACATTCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: YAVGYGYCLACENQAAFPPTDIC*KFYILL Trigger: AAGTAGAATGTAAAACTTGCAGCAAATGTCTGTGGG...TGGGAAGGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTAGCCGACAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCCATGCCTCAGCCTGATTTCTCCTTCCCCACAGACATTTaGTGCAAGTTTTACATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LWNSLLSVPWPMPQPDFSFPTDI*CKFYIL Trigger: TAGAATGTAAAACTTGCAGCAAATGTCTGTGGGGAA...GGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAGAGAATTCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGACCAATTTGACAATTCCTAACCAAGCTTCCTTTCCCAGCAAGCATCCCATTCTGTTCCTTGGCCCATaGCTCAGCCTGATTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KTNLTIPNQASFPSKHPILFLGP*LSLISP Trigger: AGGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAG...AATGGGATGCTTGCTGGGAAAGGAAGCTTGGTTAGGAATTGTCAAATTGGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTAAGCCTTCCTTCTGCTaGTTCTCCTTCCAGCAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: ASFTFYFRCHGFGILGASKPSFC*FSFQQL Trigger: CAACTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTT...ACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGACCAATTTGACAATTCCTAACCAAGCTTCCTTTCCCAGCAAGCATCCCATTGTCCATCACTGTGGCTaGCTCAGTGTGTGTCACCAA | + |
|
Preference number: 2 (lower is better) Translates to: KTNLTIPNQASFPSKHPIVHHCG*LSVCHQ Trigger: TTGGTGACACACACTGAGCCAGCCACAGTGATGGAC...AATGGGATGCTTGCTGGGAAAGGAAGCTTGGTTAGGAATTGTCAAATTGGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146590.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCAATTTGACAATTCCTAACCAAGCTTCCTTTCCCAGCAAGCATCCCATTCGTTACAGTCCATCACTGTaGCTGGCTCAGTGTGTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: TNLTIPNQASFPSKHPIRYSPSL*LAQCVS Trigger: TGACACACACTGAGCCAGCCACAGTGATGGACTGTA...ACGAATGGGATGCTTGCTGGGAAAGGAAGCTTGGTTAGGAATTGTCAAATTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146590.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTCTACTTTCGTTGCCATaGTTTCGGTATCCTAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LPKQAPFSKLWSKSAEHLLLSLP*FRYPRS Trigger: GCTCCTAGGATACCGAAACCATGGCAACGAAAGTAG...AAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCAATTTGACAATTCCTAACCAAGCTTCCTTTCCCAGCAAGCATCCCATTCGTGGATTTATACCACCATaGTTACTGCTGCCATCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TNLTIPNQASFPSKHPIRGFIPP*LLLPSV Trigger: GACTGATGGCAGCAGTAATCATGGTGGTATAAATCC...ACGAATGGGATGCTTGCTGGGAAAGGAAGCTTGGTTAGGAATTGTCAAATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | CTATGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTAAGACATTCTACTTTCGTTaGCATGGTTTCGGTATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LWIYTTMITAAISQAGAKTFYFR*HGFGIL Trigger: TAGGATACCGAAACCATGGCAACGAAAGTAGAATGT...CTTAGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCCCCACAGACATTTGCTaGAAGTTTTACATTCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: SVCPKSFLHSLSERGWLCPTDIC*KFYILL Trigger: AAGTAGAATGTAAAACTTGCAGCAAATGTCTGTGGG...GCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCTATGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTTCCCCACAGACATTTaGTGCAAGTTTTACATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: FSMDLYHHDYCCHQSGWGFPTDI*CKFYIL Trigger: TAGAATGTAAAACTTGCAGCAAATGTCTGTGGGGAA...GCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCATAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTAATACATTCTACTTTCGTTaGCATGGTTTCGGTATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PKQAPFSKLWSKSAEHLNTFYFR*HGFGIL Trigger: TAGGATACCGAAACCATGGCAACGAAAGTAGAATGT...ATTAAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGACCAATTTGACAATTCCTAACCAAGCTTCCTTTCCCAGCAAGCATCCCATTACATTCTACTTTCGTTaGCATGGTTTCGGTATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: KTNLTIPNQASFPSKHPITFYFR*HGFGIL Trigger: TAGGATACCGAAACCATGGCAACGAAAGTAGAATGT...AATGGGATGCTTGCTGGGAAAGGAAGCTTGGTTAGGAATTGTCAAATTGGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTCCCACAGACATTTGCTaGAAGTTTTACATTCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: ASFTFYFRCHGFGILGASPTDIC*KFYILL Trigger: AAGTAGAATGTAAAACTTGCAGCAAATGTCTGTGGG...ACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR GCA 90 bp | ATACGCATTTCTAAGTTACGTTCTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCTTCCCCACAGACATTTaGTGCAAGTTTTACATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: IRISKLRSLEFSPLCSLAFPTDI*CKFYIL Trigger: TAGAATGTAAAACTTGCAGCAAATGTCTGTGGGGAA...GGCCAAGGAACAGAGAGGAGAGAATTCCAGAGAACGTAACTTAGAAATGCGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR GCA 72 bp | CAGGCGCTCACAGCACTGGCTCTCCACAAGCTGGGCTaGACTCAGGGCCTGGCTCAGCTCTGGGAGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QALTALALHKLG*TQGLAQLWEEQ Trigger: CTGCTCCTCCCAGAGCTGAGCCAGGCCCTGAGTGCAGCCCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR CCA 72 bp | GGCCCACTGTGGAGTGAAGACAGGCGCTCACAGCACTaGCTCTCCACAAGCTGGGCTGCACTCAGGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GPLWSEDRRSQH*LSTSWAALRAW Trigger: CCAGGCCCTGAGTGCAGCCCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR CCA 72 bp | TGGAGTAGTCGAGGAAGCACAGGTCCTCACTCTGCCTaGCTTCTGCCCCCGAATCCTTGCAGCCCTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: WSSRGSTGPHSA*LLPPNPCSPGE Trigger: CTCCCCAGGGCTGCAAGGATTCGGGGGCAGAAGCCAGGCAGAGTGAGGACCTGTGCTTCCTCGACTACTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| 3UTR CCA 72 bp | TCTTCATCCAATGAGTGGAGCCCGGTGGGCCCACTGTaGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSSNEWSPVGPL*SEDRRSQHWLS Trigger: GGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCCCACCGGGCTCCACTCATTGGATGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR CCA 72 bp | CCACCTCTGGGCTGGCAGCTTGGGGAAGTAAGGCTTTaGAAGTCTGTAGGTGATCGGCACACCCGTGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PPLGWQLGEVRL*KSVGDRHTRGQ Trigger: CTGGCCACGGGTGTGCCGATCACCTACAGACTTCCAAAGCCTTACTTCCCCAAGCTGCCAGCCCAGAGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR GCA 72 bp | CTCCCTCCATCCTCTGCCCATGACCAAGGCCAAGGCTaGCAGGAGTTGCAGCAAAGAAGCAGTCCTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPPSSAHDQGQG*QELQQRSSPGS Trigger: TGAGCCAGGACTGCTTCTTTGCTGCAACTCCTGGCAGCCTTGGCCTTGGTCATGGGCAGAGGATGGAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| 3UTR CCA 72 bp | TGGGGTGGCAGGGGCAGAGCACCAGGCCACTACGGGTaGGGTACTCTGGCCCACACCCAGTTATTATTATCT | + |
|
Preference number: 3 (lower is better) Translates to: WGGRGRAPGHYG*GTLAHTQLLLS Trigger: AGATAATAATAACTGGGTGTGGGCCAGAGTACCCCACCCGTAGTGGCCTGGTGCTCTGCCCCTGCCACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCCATGCCTCAGCCTGATTTCTCCGTGATGCGGAGCTTCTaGCCTGCCCTGGGAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LWNSLLSVPWPMPQPDFSVMRSF*PALGEE Trigger: CTCCTCTCCCAGGGCAGGCAAGAAGCTCCGCATCAC...GGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAGAGAATTCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR TCA 72 bp | AGGGCTTTGTCTGGGATCTCTGCTGTAGCCCAATACTaGGCAGCTATCTCCAGGGGCACCATTCCCTGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RALSGISAVAQY*AAISRGTIPCP Trigger: GGGGCAGGGAATGGTGCCCCTGGAGATAGCTGCTCAGTATTGGGCTACAGCAGAGATCCCAGACAAAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR TCA 72 bp | GCAGCTTGGGGAAGTAAGGCTTTGGAAGTCTGTAGGTaGTCGGCACACCCGTGGCCAGAGGAAAACTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AAWGSKALEVCR*SAHPWPEENWG Trigger: CCCCCAGTTTTCCTCTGGCCACGGGTGTGCCGATCACCTACAGACTTCCAAAGCCTTACTTCCCCAAGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR GCA 72 bp | CCTCTGCCCATGACCAAGGCCAAGGCTGCCAGGAGTTaGAGCAAAGAAGCAGTCCTGGCTCATACTTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: PLPMTKAKAARS*SKEAVLAHTWT Trigger: GGTCCAAGTATGAGCCAGGACTGCTTCTTTGCTGCAACTCCTGGCAGCCTTGGCCTTGGTCATGGGCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| 3UTR CCA 72 bp | GGGGGAGGTGCCCAGAACTGCCTCGTCTCTGGAGGTTaGAAGTGTGAGGATGGTGAGTCTCTGCCATCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GGGAQNCLVSGG*KCEDGESLPSS Trigger: TGATGATGGCAGAGACTCACCATCCTCACACTTCCAACCTCCAGAGACGAGGCAGTTCTGGGCACCTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTCTTATTGCACATGGCTCAGCCGTGATGCGGAGCTTCTaGCCTGCCCTGGGAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QLLRGSFRICVLIAHGSAVMRSF*PALGEE Trigger: CTCCTCTCCCAGGGCAGGCAAGAAGCTCCGCATCAC...GGCTGAGCCATGTGCAATAAGAACACAGATCCTAAAGGATCCCCTGAGAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGTTGAACCTCCTCCTTCCCCTGGCAGCAATGGCTGTTTTGATAAAGAGCAACCCACCTGGGGACTaGGGTGGGGAAGAGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: EELNLLLPLAAMAVLIKSNPPGD*GGEEVW Trigger: CCATACCTCTTCCCCACCCAAGTCCCCAGGTGGGTT...GCTCTTTATCAAAACAGCCATTGCTGCCAGGGGAAGGAGGAGGTTCAACTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGTGGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCTGGGCTAACTTAGAAAACCTGTaGGCAATGGTGGAGCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLWSEDRRSQHWLSTSWANLENL*AMVELC Trigger: GCACAGCTCCACCATTGCCAACAGGTTTTCTAAGTT...AGCCCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR TCA 72 bp | TCCGTATGCTGTCGGCTACGGCTACTGTCTAGCTTGTaGAAACCAGGCTGCCTTCCCAAACAGGCCCCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SVCCRLRLLSSL*KPGCLPKQAPF Trigger: AAACGGGGCCTGTTTGGGAAGGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTAGCCGACAGCATACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR GCA 72 bp | TCTCTGGAGGTTGGAAGTGTGAGGATGGTGAGTCTCTaGCATCATCACCAGGTTCCCTCCCTCCATCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLEVGSVRMVSL*HHHQVPSLHPL Trigger: CAGAGGATGGAGGGAGGGAACCTGGTGATGATGGCAGAGACTCACCATCCTCACACTTCCAACCTCCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| 3UTR TCA 72 bp | CAATTCCCAAAGGCCCGTAATAAACGCAGGAGGAGTTaGACCTCCTCCTTCCCCTGGCAGCAATGGCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QFPKARNKRRRS*TSSFPWQQWLF Trigger: AAACAGCCATTGCTGCCAGGGGAAGGAGGAGGTTCAACTCCTCCTGCGTTTATTACGGGCCTTTGGGAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTCTTATTGCACATGGCTCAGCCCAGCCTGATTTCTCCTaGAGTGACTGGTGGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QLLRGSFRICVLIAHGSAQPDFS*SDWWQL Trigger: GAGCTGCCACCAGTCACTCAAGGAGAAATCAGGCTG...GGCTGAGCCATGTGCAATAAGAACACAGATCCTAAAGGATCCCCTGAGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTACCTCTGACAGCCGATaGCAACTCGGGGTGCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: ASFTFYFRCHGFGILGASTSDSR*QLGVPI Trigger: GATGGGCACCCCGAGTTGCAATCGGCTGTCAGAGGT...ACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
||
| 3UTR TCA 72 bp | ATCAGTCAGGCTGGGGCTAAGGGCGACACTAATATCTaGTTTGACTTTCCGTATGCTGTCGGCTACGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: ISQAGAKGDTNI*FDFPYAVGYGY Trigger: GTAGCCGTAGCCGACAGCATACGGAAAGTCAAATCAGATATTAGTGTCGCCCTTAGCCCCAGCCTGACTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR TCA 72 bp | CGATGTAGTCATCCTCTACATTCCGTTCCACTGTTTTaGGGCTGGAGCCCGTGTACTCTTCGGAGAAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RCSHPLHSVPLF*GWSPCTLRRRC Trigger: ACACCTTCTCCGAAGAGTACACGGGCTCCAGCCTCAAAACAGTGGAACGGAATGTAGAGGATGACTACATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTGCCCCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCATACATTCTACTTTCGTaGCCATGGTTTCGGTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: FPAPGSSPTLTISLETFAYILLS*PWFRYP Trigger: AGGATACCGAAACCATGGCAACGAAAGTAGAATGTA...TGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGGGGCAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTAAGGGCTACATTCTACTTTCGTaGCCATGGTTTCGGTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: WIYTTMITAAISQAGAKGYILLS*PWFRYP Trigger: AGGATACCGAAACCATGGCAACGAAAGTAGAATGTA...GCCCTTAGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTAAGGGCCTTCCCCACAGACATTaGCTGCAAGTTTTACATTCT | + |
|
Preference number: 3 (lower is better) Translates to: WIYTTMITAAISQAGAKGLPHRH*LQVLHS Trigger: AGAATGTAAAACTTGCAGCAAATGTCTGTGGGGAAG...GCCCTTAGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGACCAATTTGACAATTCCTAACCAAGCTTCCTTTCCCAGCAAGCATCCCATTCAGCCTGATTTCTCCTaGAGTGACTGGTGGCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KTNLTIPNQASFPSKHPIQPDFS*SDWWQL Trigger: GAGCTGCCACCAGTCACTCAAGGAGAAATCAGGCTG...AATGGGATGCTTGCTGGGAAAGGAAGCTTGGTTAGGAATTGTCAAATTGGTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAATTCTAATTCAAGAAATACAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTAACCCACCTGGGGACTaGGGTGGGGAAGAGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: RILIQEIQLLRGSFRICVNPPGD*GGEEVW Trigger: CCATACCTCTTCCCCACCCAAGTCCCCAGGTGGGTT...AACACAGATCCTAAAGGATCCCCTGAGAAGCTGTATTTCTTGAATTAGAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR CCA 72 bp | CCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATaGCTGTGCGGTGTTTGGCTTCCAGTTCCATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PKSFLHSLSERG*LCGVWLPVPFK Trigger: TTTAAATGGAACTGGAAGCCAAACACCGCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR TCA 72 bp | AGACCTTTGCAAGTTTTCTATGGATTTATACCACCATaGTTACTGCTGCCATCAGTCAGGCTGGGGCTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RPLQVFYGFIPP*LLLPSVRLGLR Trigger: CCTTAGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCATAGAAAACTTGCAAAGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR GCA 72 bp | CTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTaGAAGTTTTCTATGGATTTATACCACCATGATTAC | + |
|
Preference number: 3 (lower is better) Translates to: LFPYLNHKPGDL*KFSMDLYHHDY Trigger: GTAATCATGGTGGTATAAATCCATAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCTGGGGGAGGTGCCCAGAACTGCCTCGTCTCTGGAGGTTGGAAGTGTGAGCCGTGGCTGTGGCCGTaGCGGGCAGCCTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGGGAQNCLVSGGWKCEPWLWP*RAAWLL Trigger: CAAGAGCCAGGCTGCCCGGCACGGCCACAGCCACGG...CTCACACTTCCAACCTCCAGAGACGAGGCAGTTCTGGGCACCTCCCCCAGCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGCACAGGTCCTCACTCTGCCTGGCTTCTGCCCCCGAATCCTTGCAGCCCGGTGGAAGTCCCCGTaGCTGTGGCCGTGCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EEAQVLTLPGFCPRILAARWKSP*LWPCRA Trigger: TGCCCGGCACGGCCACAGCCACGGGGACTTCCACCG...GGCTGCAAGGATTCGGGGGCAGAAGCCAGGCAGAGTGAGGACCTGTGCTTCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGGCAGCTTGAGGAGCTGGCCCCATCCCAGAGGGCTTTGTCTGGGATCTCTCCGTGGCTGTGGCCGTaGCGGGCAGCCTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRQLEELAPSQRALSGISPWLWP*RAAWLL Trigger: CAAGAGCCAGGCTGCCCGGCACGGCCACAGCCACGG...AGAGATCCCAGACAAAGCCCTCTGGGATGGGGCCAGCTCCTCAAGCTGCCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR TCA 90 bp | GGGGCTGGGGGAGGTGCCCAGAACTGCCTCGTCTCTGGAGGTTGGAAGTGTGAGGGAGGCCTGCACCTCTaGCAGCCGATTGCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GAGGGAQNCLVSGGWKCEGGLHL*QPIATR Trigger: CCGAGTTGCAATCGGCTGTCAGAGGTGCAGGCCTCC...CTCACACTTCCAACCTCCAGAGACGAGGCAGTTCTGGGCACCTCCCCCAGCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGCACAGGTCCTCACTCTGCCTGGCTTCTGCCCCCGAATCCTTGCAGCCAGCGCCCGCTCGGGCTaGTTGCTTTGGATGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEAQVLTLPGFCPRILAASARSG*LLWMAL Trigger: CAAGGCCATCCAAAGCAACCAGCCCGAGCGGGCGCT...GGCTGCAAGGATTCGGGGGCAGAAGCCAGGCAGAGTGAGGACCTGTGCTTCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCTGCCCCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCACCGTGGCTGTGGCCGTaGCGGGCAGCCTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPAPGSSPTLTISLETFAPWLWP*RAAWLL Trigger: CAAGAGCCAGGCTGCCCGGCACGGCCACAGCCACGG...TGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGGGGCAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCTGGGGGAGGTGCCCAGAACTGCCTCGTCTCTGGAGGTTGGAAGTGTGAGCACCCTGGTTGTCTCTaGGGTCTTGCCTCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGGGAQNCLVSGGWKCEHPGCL*GLASAG Trigger: ACCAGCAGAGGCAAGACCGCAGAGACAACCAGGGTG...CTCACACTTCCAACCTCCAGAGACGAGGCAGTTCTGGGCACCTCCCCCAGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCGTATGCTGTCGGCTACGGCTACTGTCTAGCTTGTGAAAACCAGGCTGCCCCGTGGCTGTGGCCGTaGCGGGCAGCCTGGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPYAVGYGYCLACENQAAPWLWP*RAAWLL Trigger: CAAGAGCCAGGCTGCCCGGCACGGCCACAGCCACGG...GGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTAGCCGACAGCATACGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCGTATGCTGTCGGCTACGGCTACTGTCTAGCTTGTGAAAACCAGGCTGCCCGGTGGAAGTCCCCGTaGCTGTGGCCGTGCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPYAVGYGYCLACENQAARWKSP*LWPCRA Trigger: TGCCCGGCACGGCCACAGCCACGGGGACTTCCACCG...GGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTAGCCGACAGCATACGGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR TCA 90 bp | TACGGCTACTGTCTAGCTTGTGAAAACCAGGCTGCCTTCCCAAACAGGCCCCGTGTGGATGTGGCCCACTaGCGGTCTCGGGCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YGYCLACENQAAFPNRPRVDVAH*RSRAQA Trigger: AGCCTGAGCCCGAGACCGTCAGTGGGCCACATCCAC...ACGGGGCCTGTTTGGGAAGGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR TCA 90 bp | CGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTGCCTGCGGAGGCCTGCACCTCTaGCAGCCGATTGCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RCHGFGILGASDAELLACGGLHL*QPIATR Trigger: CCGAGTTGCAATCGGCTGTCAGAGGTGCAGGCCTCC...GCAGGCAAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGGGAGGTGCCCAGAACTGCCTCGTCTCTGGAGGTTGGAAGTGTGAGGATGGGTTTCGGTCCCGCCTaGCTTCTTGGTGGTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LGEVPRTASSLEVGSVRMGFGPA*LLGGGM Trigger: CATACCACCACCAAGAAGGCAGGCGGGACCGAAACC...CATCCTCACACTTCCAACCTCCAGAGACGAGGCAGTTCTGGGCACCTCCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGGCAGCTTGAGGAGCTGGCCCCATCCCAGAGGGCTTTGTCTGGGATCTCTCACCCTGGTTGTCTCTaGGGTCTTGCCTCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRQLEELAPSQRALSGISHPGCL*GLASAG Trigger: ACCAGCAGAGGCAAGACCGCAGAGACAACCAGGGTG...AGAGATCCCAGACAAAGCCCTCTGGGATGGGGCCAGCTCCTCAAGCTGCCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGAGGTGCCCAGAACTGCCTCGTCTCTGGAGGTTGGAAGTGTGAGGATGTCGGGCTGGTTGCTTTaGATGGCCTTGAGGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGEVPRTASSLEVGSVRMSGWLL*MALRAM Trigger: CATCGCCCTCAAGGCCATCCAAAGCAACCAGCCCGA...CATCCTCACACTTCCAACCTCCAGAGACGAGGCAGTTCTGGGCACCTCCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CCA 90 bp | CGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTGCCTGCAGCGCCCGCTCGGGCTaGTTGCTTTGGATGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RCHGFGILGASDAELLACSARSG*LLWMAL Trigger: CAAGGCCATCCAAAGCAACCAGCCCGAGCGGGCGCT...GCAGGCAAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCATCCTCTGCCCATGACCAAGGCCAAGGCTGCCAGGAGTTGCAGCAAAGACCGTGCCGGGCAGCCTaGCTCTTGTCATCACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPSSAHDQGQGCQELQQRPCRAA*LLSSPN Trigger: GTTTGGTGATGACAAGAGCCAGGCTGCCCGGCACGG...TCTTTGCTGCAACTCCTGGCAGCCTTGGCCTTGGTCATGGGCAGAGGATGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACCCAGTTATTATTATCTCTCTAGGCCAGGGTGGCCACTTCATTGCAGGCGGTGGAAGTCCCCGTaGCTGTGGCCGTGCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTPSYYYLSRPGWPLHCRRWKSP*LWPCRA Trigger: TGCCCGGCACGGCCACAGCCACGGGGACTTCCACCG...CCTGCAATGAAGTGGCCACCCTGGCCTAGAGAGATAATAATAACTGGGTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCACAGGTCCTCACTCTGCCTGGCTTCTGCCCCCGAATCCTTGCAGCCCTGTCAGTGACTCGCTTGTaGATGTGGCCCACTGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAQVLTLPGFCPRILAALSVTRL*MWPTDG Trigger: ACCGTCAGTGGGCCACATCCACAAGCGAGTCACTGA...CAGGGCTGCAAGGATTCGGGGGCAGAAGCCAGGCAGAGTGAGGACCTGTGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR GCA 90 bp | GCCCGTGTACTCTTCGGAGAAGGTGTCTGCCACGTAGTAGGCGACGTTCAGGTGGGTTTCGGTCCCGCCTaGCTTCTTGGTGGTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ARVLFGEGVCHVVGDVQVGFGPA*LLGGGM Trigger: CATACCACCACCAAGAAGGCAGGCGGGACCGAAACC...CACCTGAACGTCGCCTACTACGTGGCAGACACCTTCTCCGAAGAGTACACGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131810.8 |
||
| CDS-3UTR GCA 90 bp | GCATCCCATTCGTTAGGGGGTTGTATGAGAGAGACACCCTTGGTGGGGGTGGGGGGTTTCGGTCCCGCCTaGCTTCTTGGTGGTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ASHSLGGCMRETPLVGVGGFGPA*LLGGGM Trigger: CATACCACCACCAAGAAGGCAGGCGGGACCGAAACC...CCCCACCCCCACCAAGGGTGTCTCTCTCATACAACCCCCTAACGAATGGGATGC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCCCCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAAGTGCCTCAAAGCCTCGGTaGAAGTCCCCGTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAPGSSPTLTISLETFASASKPR*KSPWLW Trigger: CCACAGCCACGGGGACTTCCACCGAGGCTTTGAGGC...ACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGGGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTGCCCAGAACTGCCTCGTCTCTGGAGGTTGGAAGTGTGAGGATGGTGAGTTGTCTGGATGGAACTTaGGGGCCAGCTTGCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVPRTASSLEVGSVRMVSCLDGT*GPACGR Trigger: CCTACCGCAAGCTGGCCCTCAAGTTCCATCCAGACA...ACTCACCATCCTCACACTTCCAACCTCCAGAGACGAGGCAGTTCTGGGCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGCACAGGTCCTCACTCTGCCTGGCTTCTGCCCCCGAATCCTTGCAGCCAAGCCTTCCTTCTGCTaGTTCTCCTTCCAGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEAQVLTLPGFCPRILAAKPSFC*FSFQQL Trigger: CAACTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTT...GGCTGCAAGGATTCGGGGGCAGAAGCCAGGCAGAGTGAGGACCTGTGCTTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGGGAGGTGCCCAGAACTGCCTCGTCTCTGGAGGTTGGAAGTGTGAGGATGGATTGCAACTCGGGGTaGCCATCTTCTGTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGEVPRTASSLEVGSVRMDCNSG*PSSVLC Trigger: ACAGAGCACAGAAGATGGGCACCCCGAGTTGCAATC...CATCCTCACACTTCCAACCTCCAGAGACGAGGCAGTTCTGGGCACCTCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCCATGCCTCAGCCTGATTTCTCCAGCGCCCGCTCGGGCTaGTTGCTTTGGATGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWNSLLSVPWPMPQPDFSSARSG*LLWMAL Trigger: CAAGGCCATCCAAAGCAACCAGCCCGAGCGGGCGCT...GGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAGAGAATTCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGCACAGGTCCTCACTCTGCCTGGCTTCTGCCCCCGAATCCTTGCAGCCCATCACCGGTGGACTGTaGTTTTTGGTTGAGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: RKHRSSLCLASAPESLQPITGGL*FLVEGL Trigger: GAGTCCCTCAACCAAAAACCACAGTCCACCGGTGAT...GGGCTGCAAGGATTCGGGGGCAGAAGCCAGGCAGAGTGAGGACCTGTGCTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGTTGGAAGTGTGAGGATGGTGAGTCTCTGCCATCATCACCAGGTTCCCTCCTGAGGTATAGCCCTTaGCGCTCTCCCCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGWKCEDGESLPSSPGSLLRYSP*RSPLLL Trigger: CAGGAGGAGGGGAGAGCGCCAAGGGCTATACCTCAG...GAGGGAACCTGGTGATGATGGCAGAGACTCACCATCCTCACACTTCCAACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CCA 90 bp | GCATCCCATTCGTTAGGGGGTTGTATGAGAGAGACACCCTTGGTGGGGGTGGGGTCAGTGACTCGCTTGTaGATGTGGCCCACTGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASHSLGGCMRETPLVGVGSVTRL*MWPTDG Trigger: ACCGTCAGTGGGCCACATCCACAAGCGAGTCACTGA...CCCCACCCCCACCAAGGGTGTCTCTCTCATACAACCCCCTAACGAATGGGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR CAA 72 bp | TCTGTTCCTTGGCCCATGCCTCAGCCTGATTTCTCCTaGAGTGACTGGTGGCAGCTCAGGGAGGAGGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVPWPMPQPDFS*SDWWQLREEGG Trigger: TCCTCCCTCCTCCCTGAGCTGCCACCAGTCACTCAAGGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR TCA 90 bp | TGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTAAGGGCGGAGGCCTGCACCTCTaGCAGCCGATTGCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: WIYTTMITAAISQAGAKGGGLHL*QPIATR Trigger: CCGAGTTGCAATCGGCTGTCAGAGGTGCAGGCCTCC...GCCCTTAGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGGCAGCTTGAGGAGCTGGCCCCATCCCAGAGGGCTTTGTCTGGGATCTCTAAGCCTTCCTTCTGCTaGTTCTCCTTCCAGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RRQLEELAPSQRALSGISKPSFC*FSFQQL Trigger: CAACTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTT...AGAGATCCCAGACAAAGCCCTCTGGGATGGGGCCAGCTCCTCAAGCTGCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCCATGCCTCAGCCTGATTTCTCCCTGAGGTATAGCCCTTaGCGCTCTCCCCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LWNSLLSVPWPMPQPDFSLRYSP*RSPLLL Trigger: CAGGAGGAGGGGAGAGCGCCAAGGGCTATACCTCAG...GGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAGAGAATTCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | TTTGATTACTGGAGTAGTCGAGGAAGCACAGGTCCTCACTCTGCCTGGCTTCTGGCCTCAAAGCCTCGGTaGAAGTCCCCGTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FDYWSSRGSTGPHSAWLLASKPR*KSPWLW Trigger: CCACAGCCACGGGGACTTCCACCGAGGCTTTGAGGC...CAGAAGCCAGGCAGAGTGAGGACCTGTGCTTCCTCGACTACTCCAGTAATCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGCCCACTGTGGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCAGACATGAACGTTACTaGAAGGAAAGCCGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGPLWSEDRRSQHWLSTSRHERY*KESRHQ Trigger: TTGGTGGCGGCTTTCCTTCCAGTAACGTTCATGTCT...GCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | CTCCATCCTCTGCCCATGACCAAGGCCAAGGCTGCCAGGAGTTGCAGCAAAGAAAGCAAGCCTTCCTTCTaGTGCTTCTCCTTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHPLPMTKAKAARSCSKESKPSF*CFSFQQ Trigger: CTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTTGCT...TTCTTTGCTGCAACTCCTGGCAGCCTTGGCCTTGGTCATGGGCAGAGGATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTAGCGCCCGCTCGGGCTaGTTGCTTTGGATGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YFRCHGFGILGASDAELLSARSG*LLWMAL Trigger: CAAGGCCATCCAAAGCAACCAGCCCGAGCGGGCGCT...AAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGTTATTATTATCTCTCTAGGCCAGGGTGGCCACTTCATTGCAGGGTGGGACTGAGGTATAGCCCTTaGCGCTCTCCCCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSYYYLSRPGWPLHCRVGLRYSP*RSPLLL Trigger: CAGGAGGAGGGGAGAGCGCCAAGGGCTATACCTCAG...TCCCACCCTGCAATGAAGTGGCCACCCTGGCCTAGAGAGATAATAATAACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | TGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTAAGGGCCCGTGCCGGGCAGCCTaGCTCTTGTCATCACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WIYTTMITAAISQAGAKGPCRAA*LLSSPN Trigger: GTTTGGTGATGACAAGAGCCAGGCTGCCCGGCACGG...GCCCTTAGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| 3UTR CAA 72 bp | TGGCTCAGCTCTGGGAGGAGCAGCCTTCTGGAGTCCTaGGTGCGCAACTTAGAAAACCTGTTGGCAATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WLSSGRSSLLES*VRNLENLLAMV Trigger: CACCATTGCCAACAGGTTTTCTAAGTTGCGCACCAAGGACTCCAGAAGGCTGCTCCTCCCAGAGCTGAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR TCA 90 bp | CCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCGGTGTTTGGTGTCTGGATGGAACTTaGGGGCCAGCTTGCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKSFLHSLSERGWLCGVWCLDGT*GPACGR Trigger: CCTACCGCAAGCTGGCCCTCAAGTTCCATCCAGACA...CCAAACACCGCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR TCA 90 bp | CCCACACCCAGTTATTATTATCTCTCTAGGCCAGGGTGGCCACTTCATTGCAGGTGTCTGGATGGAACTTaGGGGCCAGCTTGCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPSYYYLSRPGWPLHCRCLDGT*GPACGR Trigger: CCTACCGCAAGCTGGCCCTCAAGTTCCATCCAGACA...CCTGCAATGAAGTGGCCACCCTGGCCTAGAGAGATAATAATAACTGGGTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCGGTGTTTGGCACCCTGGTTGTCTCTaGGGTCTTGCCTCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKSFLHSLSERGWLCGVWHPGCL*GLASAG Trigger: ACCAGCAGAGGCAAGACCGCAGAGACAACCAGGGTG...CCAAACACCGCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCCCATGCCTCAGCCTGATTTCTCCTTGAGTGACTGGTGGCAGCTCAGGGTGGACTGTGGTTTTTaGTTGAGGGACTCGATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PWPMPQPDFSLSDWWQLRVDCGF*LRDSIS Trigger: ACTGATCGAGTCCCTCAACCAAAAACCACAGTCCAC...CCTGAGCTGCCACCAGTCACTCAAGGAGAAATCAGGCTGAGGCATGGGCCAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTAATCGGTGGAAGTCCCCGTaGCTGTGGCCGTGCCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKQAPFSKLWSKSAEHLNRWKSP*LWPCRA Trigger: TGCCCGGCACGGCCACAGCCACGGGGACTTCCACCG...ATTAAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAAGTTTTCTAGCCTCAAAGCCTCGGTaGAAGTCCCCGTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSSPTLTISLETFASFLASKPR*KSPWLW Trigger: CCACAGCCACGGGGACTTCCACCGAGGCTTTGAGGC...TAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR TCA 90 bp | TACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTTGTCTGGATGGAACTTaGGGGCCAGCTTGCGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YFRCHGFGILGASDAELLCLDGT*GPACGR Trigger: CCTACCGCAAGCTGGCCCTCAAGTTCCATCCAGACA...AAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTGTCGGCTACGGCTACTGTCTAGCTTGTGAAAACCAGGCTGCCTTCCCAGATTGCAACTCGGGGTaGCCATCTTCTGTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YAVGYGYCLACENQAAFPDCNSG*PSSVLC Trigger: ACAGAGCACAGAAGATGGGCACCCCGAGTTGCAATC...TGGGAAGGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTAGCCGACAGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTTCGGGCTGGTTGCTTTaGATGGCCTTGAGGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: YFRCHGFGILGASDAELLSGWLL*MALRAM Trigger: CATCGCCCTCAAGGCCATCCAAAGCAACCAGCCCGA...AAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAAGTTTTCTACTGAGGTATAGCCCTTaGCGCTCTCCCCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGSSPTLTISLETFASFLLRYSP*RSPLLL Trigger: CAGGAGGAGGGGAGAGCGCCAAGGGCTATACCTCAG...TAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAAGTTTTCTACCGTGCCGGGCAGCCTaGCTCTTGTCATCACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGSSPTLTISLETFASFLPCRAA*LLSSPN Trigger: GTTTGGTGATGACAAGAGCCAGGCTGCCCGGCACGG...TAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCCATGCCTCAGCCTGATTTCTCCAAGCCTTCCTTCTGCTaGTTCTCCTTCCAGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWNSLLSVPWPMPQPDFSKPSFC*FSFQQL Trigger: CAACTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTT...GGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAGAGAATTCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | TATGCTGTCGGCTACGGCTACTGTCTAGCTTGTGAAAACCAGGCTGCCTTCCCAAAGCCTTCCTTCTGCTaGTTCTCCTTCCAGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YAVGYGYCLACENQAAFPKPSFC*FSFQQL Trigger: CAACTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTT...TGGGAAGGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTAGCCGACAGCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGTTATTATTATCTCTCTAGGCCAGGGTGGCCACTTCATTGCAGGGTGGGAAGCAAGCCTTCCTTCTaGTGCTTCTCCTTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSYYYLSRPGWPLHCRVGSKPSF*CFSFQQ Trigger: CTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTTGCT...TCCCACCCTGCAATGAAGTGGCCACCCTGGCCTAGAGAGATAATAATAACTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTCCCAGCAAGCATCCCATTCGTTAGGGGGTTGTATGAGAGAGACACCCGATTGCAACTCGGGGTaGCCATCTTCTGTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSQQASHSLGGCMRETPDCNSG*PSSVLC Trigger: ACAGAGCACAGAAGATGGGCACCCCGAGTTGCAATC...GGGTGTCTCTCTCATACAACCCCCTAACGAATGGGATGCTTGCTGGGAAAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCCATGCCTCAGCCTGATTTCTCCATCACCGGTGGACTGTaGTTTTTGGTTGAGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LWNSLLSVPWPMPQPDFSITGGL*FLVEGL Trigger: GAGTCCCTCAACCAAAAACCACAGTCCACCGGTGAT...GGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAGAGAATTCCAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCCTGAGGTATAGCCCTTaGCGCTCTCCCCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AASFTFYFRCHGFGILGALRYSP*RSPLLL Trigger: CAGGAGGAGGGGAGAGCGCCAAGGGCTATACCTCAG...GGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCCCGTGCCGGGCAGCCTaGCTCTTGTCATCACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: AASFTFYFRCHGFGILGAPCRAA*LLSSPN Trigger: GTTTGGTGATGACAAGAGCCAGGCTGCCCGGCACGG...GGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | ATACGCATTTCTAAGTTACGTTCTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCGCCTCAAAGCCTCGGTaGAAGTCCCCGTGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRISKLRSLEFSPLCSLAASKPR*KSPWLW Trigger: CCACAGCCACGGGGACTTCCACCGAGGCTTTGAGGC...GGCCAAGGAACAGAGAGGAGAGAATTCCAGAGAACGTAACTTAGAAATGCGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGGAAGTGTGAGGATGGTGAGTCTCTGCCATCATCACCAGGTTCCCTCCCTAGACATGAACGTTACTaGAAGGAAAGCCGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GWKCEDGESLPSSPGSLPRHERY*KESRHQ Trigger: TTGGTGGCGGCTTTCCTTCCAGTAACGTTCATGTCT...AGGGAGGGAACCTGGTGATGATGGCAGAGACTCACCATCCTCACACTTCCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| CDS-3UTR GCA 90 bp | TCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCAGCAAGCCTTCCTTCTaGTGCTTCTCCTTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVCPKSFLHSLSERGWLCSKPSF*CFSFQQ Trigger: CTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTTGCT...GCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTATGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTCGGGCTGGTTGCTTTaGATGGCCTTGAGGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: FSMDLYHHDYCCHQSGWGSGWLL*MALRAM Trigger: CATCGCCCTCAAGGCCATCCAAAGCAACCAGCCCGA...GCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCATAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CCA 90 bp | TTCCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTAAGCGCCCGCTCGGGCTaGTTGCTTTGGATGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FPNRPRFLNYGASQLNILSARSG*LLWMAL Trigger: CAAGGCCATCCAAAGCAACCAGCCCGAGCGGGCGCT...TAAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CCA 90 bp | TTTCCGTATGCTGTCGGCTACGGCTACTGTCTAGCTTGTGAAAACCAGGCTGCCGTGGACTGTGGTTTTTaGTTGAGGGACTCGATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPYAVGYGYCLACENQAAVDCGF*LRDSIS Trigger: ACTGATCGAGTCCCTCAACCAAAAACCACAGTCCAC...GGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTAGCCGACAGCATACGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | TATGCTGTCGGCTACGGCTACTGTCTAGCTTGTGAAAACCAGGCTGCCTTCCCAGTGGACTGTGGTTTTTaGTTGAGGGACTCGATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YAVGYGYCLACENQAAFPVDCGF*LRDSIS Trigger: ACTGATCGAGTCCCTCAACCAAAAACCACAGTCCAC...TGGGAAGGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTAGCCGACAGCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCGGTGTTTGGCTTCATCACCGGTGGACTGTaGTTTTTGGTTGAGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: RAFCIHCLREDGCAVFGFITGGL*FLVEGL Trigger: GAGTCCCTCAACCAAAAACCACAGTCCACCGGTGAT...GAAGCCAAACACCGCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CCA 90 bp | CTAAGGGCGACACTAATATCTGATTTGACTTTCCGTATGCTGTCGGCTACGGCTTCAGTGACTCGCTTGTaGATGTGGCCCACTGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRATLISDLTFRMLSATASVTRL*MWPTDG Trigger: ACCGTCAGTGGGCCACATCCACAAGCGAGTCACTGA...AGCCGTAGCCGACAGCATACGGAAAGTCAAATCAGATATTAGTGTCGCCCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | CTTCCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTGGTTTCGGTCCCGCCTaGCTTCTTGGTGGTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LPKQAPFSKLWSKSAEHLGFGPA*LLGGGM Trigger: CATACCACCACCAAGAAGGCAGGCGGGACCGAAACC...AAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAAGTTTTCTAGATTGCAACTCGGGGTaGCCATCTTCTGTGCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSSPTLTISLETFASFLDCNSG*PSSVLC Trigger: ACAGAGCACAGAAGATGGGCACCCCGAGTTGCAATC...TAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTTCGGGCTGGTTGCTTTaGATGGCCTTGAGGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASFTFYFRCHGFGILGASSGWLL*MALRAM Trigger: CATCGCCCTCAAGGCCATCCAAAGCAACCAGCCCGA...ACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | TTTGATTACTGGAGTAGTCGAGGAAGCACAGGTCCTCACTCTGCCTGGCTTCTGGTGGACTGTGGTTTTTaGTTGAGGGACTCGATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FDYWSSRGSTGPHSAWLLVDCGF*LRDSIS Trigger: ACTGATCGAGTCCCTCAACCAAAAACCACAGTCCAC...CAGAAGCCAGGCAGAGTGAGGACCTGTGCTTCCTCGACTACTCCAGTAATCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAAGTTTTCTATGGATTGGTTTCGGTCCCGCCTaGCTTCTTGGTGGTGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SSPTLTISLETFASFLWIGFGPA*LLGGGM Trigger: CATACCACCACCAAGAAGGCAGGCGGGACCGAAACC...AATCCATAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAAGTTTTCTATGGATTCACCCTGGTTGTCTCTaGGGTCTTGCCTCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPTLTISLETFASFLWIHPGCL*GLASAG Trigger: ACCAGCAGAGGCAAGACCGCAGAGACAACCAGGGTG...AATCCATAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTAATTCGGGCTGGTTGCTTTaGATGGCCTTGAGGGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: PKQAPFSKLWSKSAEHLNSGWLL*MALRAM Trigger: CATCGCCCTCAAGGCCATCCAAAGCAACCAGCCCGA...ATTAAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CCA 90 bp | CTAAGGGCGACACTAATATCTGATTTGACTTTCCGTATGCTGTCGGCTACGGCTATCACCGGTGGACTGTaGTTTTTGGTTGAGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LRATLISDLTFRMLSATAITGGL*FLVEGL Trigger: GAGTCCCTCAACCAAAAACCACAGTCCACCGGTGAT...AGCCGTAGCCGACAGCATACGGAAAGTCAAATCAGATATTAGTGTCGCCCTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CCA 90 bp | TCTGGAGGTTGGAAGTGTGAGGATGGTGAGTCTCTGCCATCATCACCAGGTTCCTTGTCATCACCAAACTaGTCGTACTGTTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGGWKCEDGESLPSSPGSLSSPN*SYCFLF Trigger: GAAAAGGAAACAGTACGACCAGTTTGGTGATGACAA...GGAACCTGGTGATGATGGCAGAGACTCACCATCCTCACACTTCCAACCTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| CDS-3UTR CCA 90 bp | TTCCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTATCAGTGACTCGCTTGTaGATGTGGCCCACTGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPNRPRFLNYGASQLNILSVTRL*MWPTDG Trigger: ACCGTCAGTGGGCCACATCCACAAGCGAGTCACTGA...TAAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR GCA 90 bp | TTCCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTAAGCAAGCCTTCCTTCTaGTGCTTCTCCTTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPNRPRFLNYGASQLNILSKPSF*CFSFQQ Trigger: CTGCTGGAAGGAGAAGCAGCAGAAGGAAGGCTTGCT...TAAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | TACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTTTGTCATCACCAAACTaGTCGTACTGTTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YFRCHGFGILGASDAELLLSSPN*SYCFLF Trigger: GAAAAGGAAACAGTACGACCAGTTTGGTGATGACAA...AAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTCTTATTGCACATGGCTCAGCCTTGTCATCACCAAACTaGTCGTACTGTTTCCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLLRGSFRICVLIAHGSALSSPN*SYCFLF Trigger: GAAAAGGAAACAGTACGACCAGTTTGGTGATGACAA...GGCTGAGCCATGTGCAATAAGAACACAGATCCTAAAGGATCCCCTGAGAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CCA 90 bp | GCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTAGACATGAACGTTACTaGAAGGAAAGCCGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASFTFYFRCHGFGILGASRHERY*KESRHQ Trigger: TTGGTGGCGGCTTTCCTTCCAGTAACGTTCATGTCT...ACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CCA 90 bp | AAGACCAATTTGACAATTCCTAACCAAGCTTCCTTTCCCAGCAAGCATCCCATTGTGGACTGTGGTTTTTaGTTGAGGGACTCGATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KTNLTIPNQASFPSKHPIVDCGF*LRDSIS Trigger: ACTGATCGAGTCCCTCAACCAAAAACCACAGTCCAC...AATGGGATGCTTGCTGGGAAAGGAAGCTTGGTTAGGAATTGTCAAATTGGTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CCA 90 bp | CCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTAATAGACATGAACGTTACTaGAAGGAAAGCCGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKQAPFSKLWSKSAEHLNRHERY*KESRHQ Trigger: TTGGTGGCGGCTTTCCTTCCAGTAACGTTCATGTCT...ATTAAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR TCA 90 bp | AGAATTCTAATTCAAGAAATACAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTGGATTTCATAGTCTCTaGCAGCCGATTGCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RILIQEIQLLRGSFRICVGFHSL*QPIATR Trigger: CCGAGTTGCAATCGGCTGTCAGAGACTATGAAATCC...AACACAGATCCTAAAGGATCCCCTGAGAAGCTGTATTTCTTGAATTAGAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | GGCGCTCACAGCACTGGCTCTCCACAAGCTGGGCTGCACTCAGGGCCTGGCTCAGTTGTCTCTGCGGTCTaGCCTCTGCTGGTAGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GAHSTGSPQAGLHSGPGSVVSAV*PLLVGV Trigger: TACACCTACCAGCAGAGGCAAGACCGCAGAGACAAC...TGAGCCAGGCCCTGAGTGCAGCCCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | CCTTGGCCCATGCCTCAGCCTGATTTCTCCTTGAGTGACTGGTGGCAGCTCAGGCTCGGGCTGGTTGCTTaGGATGGCCTTGAGGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PWPMPQPDFSLSDWWQLRLGLVA*DGLEGD Trigger: ATCGCCCTCAAGGCCATCCAAAGCAACCAGCCCGAG...CCTGAGCTGCCACCAGTCACTCAAGGAGAAATCAGGCTGAGGCATGGGCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | TTCCCTGCCCCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAGCCCGCTCGGGCTGGTaGCTTTGGATGGCCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPAPGSSPTLTISLETFAARSGW*LWMALR Trigger: CCTCAAGGCCATCCAAAGCAACCAGCCCGAGCGGGC...TGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGGGGCAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | GGAAGCACAGGTCCTCACTCTGCCTGGCTTCTGCCCCCGAATCCTTGCAGCCCTGTTGTCTCTGCGGTCTaGCCTCTGCTGGTAGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GSTGPHSAWLLPPNPCSPVVSAV*PLLVGV Trigger: TACACCTACCAGCAGAGGCAAGACCGCAGAGACAAC...AGGGCTGCAAGGATTCGGGGGCAGAAGCCAGGCAGAGTGAGGACCTGTGCTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| CDS-3UTR CAA 90 bp | GGCCCACTGTGGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCTGGGTTGTCTCTGCGGTCTaGCCTCTGCTGGTAGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GPLWSEDRRSQHWLSTSWVVSAV*PLLVGV Trigger: TACACCTACCAGCAGAGGCAAGACCGCAGAGACAAC...CCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | CCTCCATCCTCTGCCCATGACCAAGGCCAAGGCTGCCAGGAGTTGCAGCAAAGAACCTCTGACAGCCGATaGCAACTCGGGGTGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PPSSAHDQGQGCQELQQRTSDSR*QLGVPI Trigger: GATGGGCACCCCGAGTTGCAATCGGCTGTCAGAGGT...TCTTTGCTGCAACTCCTGGCAGCCTTGGCCTTGGTCATGGGCAGAGGATGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| CDS-3UTR CAA 90 bp | CCTTGGCCCATGCCTCAGCCTGATTTCTCCTTGAGTGACTGGTGGCAGCTCAGGACCTCTGACAGCCGATaGCAACTCGGGGTGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PWPMPQPDFSLSDWWQLRTSDSR*QLGVPI Trigger: GATGGGCACCCCGAGTTGCAATCGGCTGTCAGAGGT...CCTGAGCTGCCACCAGTCACTCAAGGAGAAATCAGGCTGAGGCATGGGCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 |
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| CDS-3UTR CAA 90 bp | TCTGGAGGTTGGAAGTGTGAGGATGGTGAGTCTCTGCCATCATCACCAGGTTCCGCCCGCTCGGGCTGGTaGCTTTGGATGGCCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGGWKCEDGESLPSSPGSARSGW*LWMALR Trigger: CCTCAAGGCCATCCAAAGCAACCAGCCCGAGCGGGC...GGAACCTGGTGATGATGGCAGAGACTCACCATCCTCACACTTCCAACCTCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| CDS-3UTR CAA 90 bp | GAAGCACAGGTCCTCACTCTGCCTGGCTTCTGCCCCCGAATCCTTGCAGCCCTGGGTGGACTGTGGTTTTaGGTTGAGGGACTCGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: EAQVLTLPGFCPRILAALGGLWF*VEGLDQ Trigger: CTGATCGAGTCCCTCAACCAAAAACCACAGTCCACC...CAGGGCTGCAAGGATTCGGGGGCAGAAGCCAGGCAGAGTGAGGACCTGTGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCACTGTGGAGTGAAGACAGGCGCTCACAGCACTGGCTCTCCACAAGCTGGGGTGGACTGTGGTTTTaGGTTGAGGGACTCGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPLWSEDRRSQHWLSTSWGGLWF*VEGLDQ Trigger: CTGATCGAGTCCCTCAACCAAAAACCACAGTCCACC...CCAGCTTGTGGAGAGCCAGTGCTGTGAGCGCCTGTCTTCACTCCACAGTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTGCCCCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCACCGCCATCACCCTGGTaGTCTCTGCGGTCTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPAPGSSPTLTISLETFAPPSPW*SLRSCL Trigger: GAGGCAAGACCGCAGAGACAACCAGGGTGATGGCGG...TGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGGGGCAGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGAAGTGTGAGGATGGTGAGTCTCTGCCATCATCACCAGGTTCCCTCCCTCCTCGGGCTGGTTGCTTaGGATGGCCTTGAGGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VGSVRMVSLCHHHQVPSLLGLVA*DGLEGD Trigger: ATCGCCCTCAAGGCCATCCAAAGCAACCAGCCCGAG...GAGGGAGGGAACCTGGTGATGATGGCAGAGACTCACCATCCTCACACTTCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTGCCCCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAGTCCCGCCTGCCTTCTaGGTGGTGGTATGGGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPAPGSSPTLTISLETFAVPPAF*VVVWVV Trigger: CACTACCCATACCACCACCAAGAAGGCAGGCGGGAC...TGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGGGGCAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCCCAGGCTCTTCCCCTACCTTAACCATAAGCCTGGAGACCTTTGCAAGTGTCCCGCCTGCCTTCTaGGTGGTGGTATGGGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAPGSSPTLTISLETFASVPPAF*VVVWVV Trigger: CACTACCCATACCACCACCAAGAAGGCAGGCGGGAC...ACTTGCAAAGGTCTCCAGGCTTATGGTTAAGGTAGGGGAAGAGCCTGGGGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGAGGTTGGAAGTGTGAGGATGGTGAGTCTCTGCCATCATCACCAGGTTCCCCGCCATCACCCTGGTaGTCTCTGCGGTCTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGGWKCEDGESLPSSPGSPPSPW*SLRSCL Trigger: GAGGCAAGACCGCAGAGACAACCAGGGTGATGGCGG...GGAACCTGGTGATGATGGCAGAGACTCACCATCCTCACACTTCCAACCTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CAA 90 bp | CTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCCATGCCTCAGCCTGATTTCTCCCTCGGGCTGGTTGCTTaGGATGGCCTTGAGGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: LWNSLLSVPWPMPQPDFSLGLVA*DGLEGD Trigger: ATCGCCCTCAAGGCCATCCAAAGCAACCAGCCCGAG...GGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAGAGAATTCCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGAGGTTGGAAGTGTGAGGATGGTGAGTCTCTGCCATCATCACCAGGTTCCGTCCCGCCTGCCTTCTaGGTGGTGGTATGGGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGGWKCEDGESLPSSPGSVPPAF*VVVWVV Trigger: CACTACCCATACCACCACCAAGAAGGCAGGCGGGAC...GGAACCTGGTGATGATGGCAGAGACTCACCATCCTCACACTTCCAACCTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCGTATGCTGTCGGCTACGGCTACTGTCTAGCTTGTGAAAACCAGGCTGCCGTCCCGCCTGCCTTCTaGGTGGTGGTATGGGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPYAVGYGYCLACENQAAVPPAF*VVVWVV Trigger: CACTACCCATACCACCACCAAGAAGGCAGGCGGGAC...GGCAGCCTGGTTTTCACAAGCTAGACAGTAGCCGTAGCCGACAGCATACGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | CCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCGGTGTTTGGCTCGGGCTGGTTGCTTaGGATGGCCTTGAGGGCGAT | + |
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Preference number: 5 (lower is better) Translates to: PKSFLHSLSERGWLCGVWLGLVA*DGLEGD Trigger: ATCGCCCTCAAGGCCATCCAAAGCAACCAGCCCGAG...CCAAACACCGCACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | TGTCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGCCCGCTCGGGCTGGTaGCTTTGGATGGCCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: CLSVLRAFCIHCLREDGCARSGW*LWMALR Trigger: CCTCAAGGCCATCCAAAGCAACCAGCCCGAGCGGGC...ACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | GGAGGTTGGAAGTGTGAGGATGGTGAGTCTCTGCCATCATCACCAGGTTCCCTCGCTGTGCCAATGGCTTaGAAAGCTTCAGTGGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: GGWKCEDGESLPSSPGSLAVPMA*KASVAP Trigger: TGGGGCCACTGAAGCTTTCAAAGCCATTGGCACAGC...GAGGGAACCTGGTGATGATGGCAGAGACTCACCATCCTCACACTTCCAACCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142819.8 |
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| CDS-3UTR CAA 90 bp | CAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTCTTATTGCACATGGCTCAGCCCCGCCATCACCCTGGTaGTCTCTGCGGTCTTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: QLLRGSFRICVLIAHGSAPPSPW*SLRSCL Trigger: GAGGCAAGACCGCAGAGACAACCAGGGTGATGGCGG...GGCTGAGCCATGTGCAATAAGAACACAGATCCTAAAGGATCCCCTGAGAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTATGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCGCCCGCTCGGGCTGGTaGCTTTGGATGGCCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: FSMDLYHHDYCCHQSGWGARSGW*LWMALR Trigger: CCTCAAGGCCATCCAAAGCAACCAGCCCGAGCGGGC...GCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCATAGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | TGTCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTCCGCCATCACCCTGGTaGTCTCTGCGGTCTTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: CLSVLRAFCIHCLREDGCPPSPW*SLRSCL Trigger: GAGGCAAGACCGCAGAGACAACCAGGGTGATGGCGG...ACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | GCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGCCCGCTCGGGCTGGTaGCTTTGGATGGCCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: ASFTFYFRCHGFGILGASARSGW*LWMALR Trigger: CCTCAAGGCCATCCAAAGCAACCAGCCCGAGCGGGC...ACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | CTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCCATGCCTCAGCCTGATTTCTCCGGTGGACTGTGGTTTTaGGTTGAGGGACTCGATCAG | + |
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Preference number: 5 (lower is better) Translates to: LWNSLLSVPWPMPQPDFSGGLWF*VEGLDQ Trigger: CTGATCGAGTCCCTCAACCAAAAACCACAGTCCACC...GGAGAAATCAGGCTGAGGCATGGGCCAAGGAACAGAGAGGAGAGAATTCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | CTATGGATTTATACCACCATGATTACTGCTGCCATCAGTCAGGCTGGGGCTAAGACCTCTGACAGCCGATaGCAACTCGGGGTGCCCATC | + |
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Preference number: 5 (lower is better) Translates to: LWIYTTMITAAISQAGAKTSDSR*QLGVPI Trigger: GATGGGCACCCCGAGTTGCAATCGGCTGTCAGAGGT...CTTAGCCCCAGCCTGACTGATGGCAGCAGTAATCATGGTGGTATAAATCCATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 |
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| CDS-3UTR CAA 90 bp | GCTGCAAGTTTTACATTCTACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCGTCCCGCCTGCCTTCTaGGTGGTGGTATGGGTAGTG | + |
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Preference number: 5 (lower is better) Translates to: AASFTFYFRCHGFGILGAVPPAF*VVVWVV Trigger: CACTACCCATACCACCACCAAGAAGGCAGGCGGGAC...GGCTCCTAGGATACCGAAACCATGGCAACGAAAGTAGAATGTAAAACTTGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | CAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTCTTATTGCACATGGCTCAGCCGCTGTGCCAATGGCTTaGAAAGCTTCAGTGGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: QLLRGSFRICVLIAHGSAAVPMA*KASVAP Trigger: TGGGGCCACTGAAGCTTTCAAAGCCATTGGCACAGC...GGCTGAGCCATGTGCAATAAGAACACAGATCCTAAAGGATCCCCTGAGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | CTTCCCAAACAGGCCCCGTTTTCTAAATTATGGAGCAAGTCAGCTGAACATCTTCTCGGGCTGGTTGCTTaGGATGGCCTTGAGGGCGAT | + |
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Preference number: 5 (lower is better) Translates to: LPKQAPFSKLWSKSAEHLLGLVA*DGLEGD Trigger: ATCGCCCTCAAGGCCATCCAAAGCAACCAGCCCGAG...AAGATGTTCAGCTGACTTGCTCCATAATTTAGAAAACGGGGCCTGTTTGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | TACTTTCGTTGCCATGGTTTCGGTATCCTAGGAGCCAGTGATGCGGAGCTTCTTGGTGGACTGTGGTTTTaGGTTGAGGGACTCGATCAG | + |
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Preference number: 5 (lower is better) Translates to: YFRCHGFGILGASDAELLGGLWF*VEGLDQ Trigger: CTGATCGAGTCCCTCAACCAAAAACCACAGTCCACC...AAGAAGCTCCGCATCACTGGCTCCTAGGATACCGAAACCATGGCAACGAAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | ATACGCATTTCTAAGTTACGTTCTCTGGAATTCTCTCCTCTCTGTTCCTTGGCCGTCTCTGACAGCCGATaGCAACTCGGGGTGCCCATC | + |
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Preference number: 5 (lower is better) Translates to: IRISKLRSLEFSPLCSLAVSDSR*QLGVPI Trigger: GATGGGCACCCCGAGTTGCAATCGGCTGTCAGAGAC...GGCCAAGGAACAGAGAGGAGAGAATTCCAGAGAACGTAACTTAGAAATGCGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | TGTCTGTCTGTCCTAAGAGCTTTCTGCATTCACTGTCTGAGAGAGGATGGCTGTGGTGGACTGTGGTTTTaGGTTGAGGGACTCGATCAG | + |
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Preference number: 5 (lower is better) Translates to: CLSVLRAFCIHCLREDGCGGLWF*VEGLDQ Trigger: CTGATCGAGTCCCTCAACCAAAAACCACAGTCCACC...ACAGCCATCCTCTCTCAGACAGTGAATGCAGAAAGCTCTTAGGACAGACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | TTAACCATAAGCCTGGAGACCTTTGCAAGTTTTCTATGGATTTATACCACCATGGCTGTGCCAATGGCTTaGAAAGCTTCAGTGGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LTISLETFASFLWIYTTMAVPMA*KASVAP Trigger: TGGGGCCACTGAAGCTTTCAAAGCCATTGGCACAGC...CATGGTGGTATAAATCCATAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | TTAACCATAAGCCTGGAGACCTTTGCAAGTTTTCTATGGATTTATACCACCATGGTTGTCTCTGCGGTCTaGCCTCTGCTGGTAGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: LTISLETFASFLWIYTTMVVSAV*PLLVGV Trigger: TACACCTACCAGCAGAGGCAAGACCGCAGAGACAAC...CATGGTGGTATAAATCCATAGAAAACTTGCAAAGGTCTCCAGGCTTATGGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020309.7 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS-3UTR CAA 90 bp | AGAATTCTAATTCAAGAAATACAGCTTCTCAGGGGATCCTTTAGGATCTGTGTTGCTGTGCCAATGGCTTaGAAAGCTTCAGTGGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RILIQEIQLLRGSFRICVAVPMA*KASVAP Trigger: TGGGGCCACTGAAGCTTTCAAAGCCATTGGCACAGC...AACACAGATCCTAAAGGATCCCCTGAGAAGCTGTATTTCTTGAATTAGAATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS GCA 72 bp | TCAAAGCCTCGGTGGAAGTCCCCGTGGCTGTGGCCGTaGCGGGCAGCCTGGCTCTTGTCATCACCAAACTGG | + |
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Preference number: 6 (lower is better) Translates to: SKPRWKSPWLWP*RAAWLLSSPNW Trigger: CCAGTTTGGTGATGACAAGAGCCAGGCTGCCCGGCACGGCCACAGCCACGGGGACTTCCACCGAGGCTTTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000142819.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS GCA 72 bp | GGTGGACTGTGGTTTTTGGTTGAGGGACTCGATCAGTaGGCTGACTCGTGGCGTCGGGTAGAGCCGCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: GGLWFLVEGLDQ*ADSWRRVEPLR Trigger: GCGCAGCGGCTCTACCCGACGCCACGAGTCAGCGCACTGATCGAGTCCCTCAACCAAAAACCACAGTCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000142819.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS CCA 72 bp | TGGAAGTCCCCGTGGCTGTGGCCGTGCCGGGCAGCCTaGCTCTTGTCATCACCAAACTGGTCGTACTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: WKSPWLWPCRAA*LLSSPNWSYCF Trigger: GAAACAGTACGACCAGTTTGGTGATGACAAGAGCCAGGCTGCCCGGCACGGCCACAGCCACGGGGACTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020309.7 ENSMUST00000142819.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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| CDS CAA 72 bp | TGTGGGTTGAGGGTGATCACCGGTGGACTGTGGTTTTaGGTTGAGGGACTCGATCAGTGCGCTGACTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: CGLRVITGGLWF*VEGLDQCADSW Trigger: CCACGAGTCAGCGCACTGATCGAGTCCCTCAACCAAAAACCACAGTCCACCGGTGATCACCCTCAACCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020309.7 ENSMUST00000131810.8 ENSMUST00000142819.8 ENSMUST00000146590.8 ENSMUST00000147914.8 |
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