Pregenerated sensors for DNAJB11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004460Ensembl transcript IDs: ENSMUST00000004574.14, ENSMUST00000133013.2, ENSMUST00000166487.10, ENSMUST00000178320.2
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATaGTGTGTGGCCATCCTGCCTGATGGGAAGACTTCCCATCGGCTC | + |
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Preference number: 1 (lower is better) Translates to: VFSGAWEPGSHRSSA*CVAILPDGKTSHRL Trigger: GAGCCGATGGGAAGTCTTCCCATCAGGCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCCCACTAAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| 3UTR TCA 90 bp | GCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGCCTaGTGGGAAGACTTCCCATCGGCTCACAGGAAAAAGAAACAGGAG | + |
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Preference number: 1 (lower is better) Translates to: AGLSSFLCMLCGHPA*WEDFPSAHRKKKQE Trigger: CTCCTGTTTCTTTTTCCTGTGAGCCGATGGGAAGTCTTCCCATCAGGCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
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| 3UTR GCA 90 bp | GGAAGTGGACCTGTTTCAGAAAGGTTCCCTGGAGCAACTCCTGTCTaGATTGTCTGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGG | + |
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Preference number: 1 (lower is better) Translates to: GSGPVSERFPGATPV*IVWKSAVQFTGWQR Trigger: CCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAGACAATGCAGACAGGAGTTGCTCCAGGGAACCTTTCTGAAACAGGTCCACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CCA 90 bp | CCTGTTTCAGAAAGGTTCCCTGGAGCAACTCCTGTCTGCATTGTCTaGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: PVSERFPGATPVCIV*KSAVQFTGWQRQLS Trigger: ACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAGACAATGCAGACAGGAGTTGCTCCAGGGAACCTTTCTGAAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CCA 90 bp | CCACCACCTGCCAGAGGTAGTGGAAAAGAAAGGATATGGGGGAAGTaGACCTGTTTCAGAAAGGTTCCCTGGAGCAACTCCTGTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: PPPARGSGKERIWGK*TCFRKVPWSNSCLH Trigger: ATGCAGACAGGAGTTGCTCCAGGGAACCTTTCTGAAACAGGTCCACTTCCCCCATATCCTTTCTTTTCCACTACCTCTGGCAGGTGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGTCCACTCACGCCCCTGCCTCAGCCTaGGCCAGTGGGAGGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LEISSSVHRLAAAAQSTHAPASA*ASGRAP Trigger: TGGGGCCCTCCCACTGGCTCAGGCTGAGGCAGGGGC...GTGAGTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR TCA 90 bp | GCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATTGTGGCCATCCTGCCTaGTGGGAAGACTTCCCATCG | + |
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Preference number: 2 (lower is better) Translates to: ARCYRHHVFSGAWEPGSHCGHPA*WEDFPS Trigger: CGATGGGAAGTCTTCCCATCAGGCAGGATGGCCACA...ATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATaGTGTGTGGCCATCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: RARCYRHHVFSGAWEPGSHRSSA*CVAILP Trigger: AGGCAGGATGGCCACACAGCATGCAGAGGAACGATG...AGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| 3UTR CAA 90 bp | CTCATCTGGTTTCCTTTGCTCGGGCATCCTCTGAGACGTTACTCCTaGAACCTCGGGCAGCACCAGACGTTAAATCCCCAGAGGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LIWFPLLGHPLRRYS*NLGQHQTLNPQRGR Trigger: CCTCCCCCTCTGGGGATTTAACGTCTGGTGCTGCCCGAGGTTCAAGGAGTAACGTCTCAGAGGATGCCCGAGCAAAGGAAACCAGATGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGCCTCTGCATGCTGTGTaGCCATCCTGCCTGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: FFELVAIDTMCLVGPGSRPLHAV*PSCLMG Trigger: TCCCATCAGGCAGGATGGCCACACAGCATGCAGAGG...CCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| 3UTR-3UTR TCA 90 bp | CCATGGAGTCCTATTTATACCCTTCCACCTGTCCTCCATGGGTCTTGCCTCAATCCAATCCCCAGCCTCTaGGCTGTCACAGTGACATCA | + |
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Preference number: 2 (lower is better) Translates to: PWSPIYTLPPVLHGSCLNPIPSL*AVTVTS Trigger: TGATGTCACTGTGACAGCTCAGAGGCTGGGGATTGG...ATTGAGGCAAGACCCATGGAGGACAGGTGGAAGGGTATAAATAGGACTCCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR CCA 90 bp | AGCGTTGCTCAGCTAGCTGTACCAGCAAGCCAAGCTCTGTCTCCATCACACCATCGTACGGCTGCTTTATaGGCAGAAATGTTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SVAQLAVPASQALSPSHHRTAAL*AEMLQR Trigger: CCTCTGCAACATTTCTGCCCATAAAGCAGCCGTACG...ATGGTGTGATGGAGACAGAGCTTGGCTTGCTGGTACAGCTAGCTGAGCAACGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR CCA 90 bp | TGCATTGTCTGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGTTCCACCTGTCCTCCATaGGTCTTGCCTCAATATGGG | + |
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Preference number: 2 (lower is better) Translates to: CIVWKSAVQFTGWQRQLSSTCPP*VLPQYG Trigger: CCCATATTGAGGCAAGACCCATGGAGGACAGGTGGA...ACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAGACAATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR TCA 90 bp | GGACCTGTTTCAGAAAGGTTCCCTGGAGCAACTCCTGTCTGCATTGTCTGGAAAGGTGCTGAGAGGTTGTaGGGCCAGATCATGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: GPVSERFPGATPVCIVWKGAERL*GQIMKR Trigger: TCTCTTCATGATCTGGCCTCACAACCTCTCAGCACC...TTTCCAGACAATGCAGACAGGAGTTGCTCCAGGGAACCTTTCTGAAACAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCTCTCAGGAAAATGAAGGTCAGCGAAGACTCGAGACTCACAAGCGTTGCATGTTGCAGAGGTGCTaGGAGGTTGTGAGGCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: CLSQENEGQRRLETHKRCMLQRC*EVVRPD Trigger: ATCTGGCCTCACAACCTCTCAGCACCTCTGCAACAT...GCAACGCTTGTGAGTCTCGAGTCTTCGCTGACCTTCATTTTCCTGAGAGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR GCA 90 bp | TGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGTCCACTCACATATGGGCAGAAATGTTaGAGAGGTGCTGAGAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: WKSAVQFTGWQRQLSPLTYGQKC*RGAERL Trigger: CAACCTCTCAGCACCTCTGCAACATTTCTGCCCATA...TGTGAGTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR GCA 90 bp | AGCGTTGCTCAGCTAGCTGTACCAGCAAGCCAAGCTCTGTCTCCATCACACCATGATGAGCCGTACGGCTaGTTTATGGGCAGAAATGTT | + |
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Preference number: 2 (lower is better) Translates to: SVAQLAVPASQALSPSHHDEPYG*FMGRNV Trigger: AACATTTCTGCCCATAAAGCAGCCGTACGGCTCATC...ATGGTGTGATGGAGACAGAGCTTGGCTTGCTGGTACAGCTAGCTGAGCAACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR CCA 90 bp | CGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTACAGACTTCTCCAGTTaGCATTTTGAAATAGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: RARCYRHHVFSGAWEPGSTDFSS*HFEIAN Trigger: GTTAGCTATTTCAAAATGCCAACTGGAGAAGTCTGT...AGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
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| 3UTR-3UTR CCA 90 bp | GCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCTCATAAGGCTACCTTaGACAGATACAGAAAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: ARCYRHHVFSGAWEPGSHLIRLP*TDTEKY Trigger: GTACTTTTCTGTATCTGTCCAAGGTAGCCTTATGAG...ATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000178320.2 |
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| 3UTR-3UTR TCA 90 bp | CTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGATAATAAATATCGCTaGTCCACCTCTTTCAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LVAIDTMCLVGPGSRALIDNKYR*STSFKV Trigger: GACTTTGAAAGAGGTGGATCAGCGATATTTATTATC...GATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
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| 3UTR-3UTR GCA 90 bp | ATGGTTCTTACAAACGCTTTAACCTTTAACCTCCCTTGTAGCCCACCACCTGCCGGAGCAACTCCTGTCTaGATTGTCTGGAAATCAGCA | + |
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Preference number: 2 (lower is better) Translates to: MVLTNALTFNLPCSPPPAGATPV*IVWKSA Trigger: TGCTGATTTCCAGACAATGCAGACAGGAGTTGCTCC...GGCAGGTGGTGGGCTACAAGGGAGGTTAAAGGTTAAAGCGTTTGTAAGAACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCAGAGGTAGTGGAAAAGAAAGGATATGGGGGAAGTGGACCTGTTTCAGAGGTCTTGCCTCAATATaGGAATCCAATCAGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: PARGSGKERIWGKWTCFRGLASI*ESNQWE Trigger: TTCCCACTGATTGGATTCCCATATTGAGGCAAGACC...TCTGAAACAGGTCCACTTCCCCCATATCCTTTCTTTTCCACTACCTCTGGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CAA 90 bp | CCAAAGAAAACGGGAAAATATGTTCTCTCAAAGACAGTGAGGTCTTaGTGTAACTTTAATTCATGTAGCTCAGTCTCTAGTCTACTCGGT | + |
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Preference number: 2 (lower is better) Translates to: PKKTGKYVLSKTVRS*CNFNSCSSVSSLLG Trigger: ACCGAGTAGACTAGAGACTGAGCTACATGAATTAAAGTTACACAAAGACCTCACTGTCTTTGAGAGAACATATTTTCCCGTTTTCTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
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| 3UTR GCA 72 bp | GGGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATaGTGTGTGGCCATCCTGCCTGATGGGAAGACTTCC | + |
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Preference number: 3 (lower is better) Translates to: GAWEPGSHRSSA*CVAILPDGKTS Trigger: GGAAGTCTTCCCATCAGGCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| 3UTR CCA 72 bp | GGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTaGCCATCCTGCCTGATGGGAAGACTTCCCATCGGC | + |
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Preference number: 3 (lower is better) Translates to: GSRALIVPLHAV*PSCLMGRLPIG Trigger: GCCGATGGGAAGTCTTCCCATCAGGCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| 3UTR TCA 72 bp | CAGTTCGGCAGAGTAGTGCCACCAACAACAGTGACATaGCCTAGCACAGACAGCCAGGCCCCTGCCTCAGCC | + |
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Preference number: 3 (lower is better) Translates to: QFGRVVPPTTVT*PSTDSQAPASA Trigger: GGCTGAGGCAGGGGCCTGGCTGTCTGTGCTAGGTCATGTCACTGTTGTTGGTGGCACTACTCTGCCGAACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR GCA 72 bp | GCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTaGCTGATGGGAAGACTTCCCATCGGCTCACAGGAA | + |
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Preference number: 3 (lower is better) Translates to: ALIVPLHAVWPS*LMGRLPIGSQE Trigger: TTCCTGTGAGCCGATGGGAAGTCTTCCCATCAGGCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
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| 3UTR CCA 72 bp | GCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTaGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGT | + |
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Preference number: 3 (lower is better) Translates to: ARCYRHHVFSGA*EPGSHRSSACC Trigger: ACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| 3UTR TCA 72 bp | GTTGCAGAGGTGCTGAGAGGTTGTGAGGCCAGATCATaGAGAGACCCCCACCCTGGTCTCTTTTCCTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: VAEVLRGCEARS*RDPHPGLFSFG Trigger: CCCAAAGGAAAAGAGACCAGGGTGGGGGTCTCTTCATGATCTGGCCTCACAACCTCTCAGCACCTCTGCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGCTCATCTGGTTTCCTTaGCTCGGGCATCCTCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: FFELVAIDTMCLVGPGSRLIWFP*LGHPLR Trigger: TCTCAGAGGATGCCCGAGCAAAGGAAACCAGATGAG...CCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
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| 3UTR TCA 72 bp | ACGGCTGCTTTATGGGCAGAAATGTTGCAGAGGTGCTaGGAGGTTGTGAGGCCAGATCATGAAGAGACCCCC | + |
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Preference number: 3 (lower is better) Translates to: TAALWAEMLQRC*EVVRPDHEETP Trigger: GGGGGTCTCTTCATGATCTGGCCTCACAACCTCTCAGCACCTCTGCAACATTTCTGCCCATAAAGCAGCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR GCA 72 bp | GCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTaGCTGATGGGAAGACTTCCCATCGGCTCTTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: ALIVPLHAVWPS*LMGRLPIGSFK Trigger: TTTGAAAGAGCCGATGGGAAGTCTTCCCATCAGGCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| 3UTR CCA 72 bp | GAAAGGTTCCCTGGAGCAACTCCTGTCTGCATTGTCTaGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGG | + |
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Preference number: 3 (lower is better) Translates to: ERFPGATPVCIV*KSAVQFTGWQR Trigger: CCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAGACAATGCAGACAGGAGTTGCTCCAGGGAACCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CCA 72 bp | TGCATTGTCTGGAAATCAGCAGTTCAGTTCACAGGTTaGCAGCGGCAGCTCAGTCCACTCACAAGCACTTCA | + |
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Preference number: 3 (lower is better) Translates to: CIVWKSAVQFTG*QRQLSPLTSTS Trigger: TGAAGTGCTTGTGAGTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAGACAATGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CCA 72 bp | GCCAGAGGTAGTGGAAAAGAAAGGATATGGGGGAAGTaGACCTGTTTCAGAAAGGTTCCCTGGAGCAACTCC | + |
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Preference number: 3 (lower is better) Translates to: ARGSGKERIWGK*TCFRKVPWSNS Trigger: GGAGTTGCTCCAGGGAACCTTTCTGAAACAGGTCCACTTCCCCCATATCCTTTCTTTTCCACTACCTCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR-3UTR CAA 90 bp | TCCTCTGAGACGTTACTCCTTGAACCTCGGGCAGCACCAGACGTTAAATCCCCAACCTTCTGCTGGCCATaGTTGTCTGAATGCAATAGA | + |
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Preference number: 3 (lower is better) Translates to: SSETLLLEPRAAPDVKSPTFCWP*LSECNR Trigger: TCTATTGCATTCAGACAACAATGGCCAGCAGAAGGT...TGGGGATTTAACGTCTGGTGCTGCCCGAGGTTCAAGGAGTAACGTCTCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
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| 3UTR TCA 72 bp | CAGGAGAAGTTCTCAGCTGTGTCTCTCTCAGGAAAATaGAGGTCAGCGAAGACTCGAGACTCACAAGCGTTG | + |
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Preference number: 3 (lower is better) Translates to: QEKFSAVSLSGK*RSAKTRDSQAL Trigger: CAACGCTTGTGAGTCTCGAGTCTTCGCTGACCTTCATTTTCCTGAGAGAGACACAGCTGAGAACTTCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR GCA 72 bp | CCTATTTATACCCTTCCACCTGTCCTCCATGGGTCTTaGCTCAATATGGGAATCCAATCAGTGGGAATCCGG | + |
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Preference number: 3 (lower is better) Translates to: PIYTLPPVLHGS*LNMGIQSVGIR Trigger: CCGGATTCCCACTGATTGGATTCCCATATTGAGGCAAGACCCATGGAGGACAGGTGGAAGGGTATAAATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CCA 72 bp | TGTACCAGCAAGCCAAGCTCTGTCTCCATCACACCATaGAGTCCTATTTATACCCTTCCACCTGTCCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: CTSKPSSVSITP*SPIYTLPPVLH Trigger: ATGGAGGACAGGTGGAAGGGTATAAATAGGACTCCATGGTGTGATGGAGACAGAGCTTGGCTTGCTGGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CCA 72 bp | ATATGGGGGAAGTGGACCTGTTTCAGAAAGGTTCCCTaGAGCAACTCCTGTCTGCATTGTCTGGAAATCAGC | + |
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Preference number: 3 (lower is better) Translates to: IWGKWTCFRKVP*SNSCLHCLEIS Trigger: GCTGATTTCCAGACAATGCAGACAGGAGTTGCTCCAGGGAACCTTTCTGAAACAGGTCCACTTCCCCCATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR GCA 72 bp | AAAGAAAGCTTCTCTCCTATGGATGAGCCGTACGGCTaGTTTATGGGCAGAAATGTTGCAGAGGTGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: KESFSPMDEPYG*FMGRNVAEVLR Trigger: TCTCAGCACCTCTGCAACATTTCTGCCCATAAAGCAGCCGTACGGCTCATCCATAGGAGAGAAGCTTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR GCA 72 bp | CCTGTTTCAGAAAGGTTCCCTGGAGCAACTCCTGTCTaGATTGTCTGGAAATCAGCAGTTCAGTTCACAGGT | + |
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Preference number: 3 (lower is better) Translates to: PVSERFPGATPV*IVWKSAVQFTG Trigger: ACCTGTGAACTGAACTGCTGATTTCCAGACAATGCAGACAGGAGTTGCTCCAGGGAACCTTTCTGAAACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CCA 72 bp | ATGGAGTCCTATTTATACCCTTCCACCTGTCCTCCATaGGTCTTGCCTCAATATGGGAATCCAATCAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: MESYLYPSTCPP*VLPQYGNPISG Trigger: CCCACTGATTGGATTCCCATATTGAGGCAAGACCCATGGAGGACAGGTGGAAGGGTATAAATAGGACTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR TCA 72 bp | GTCCACTTTAAGGAAACGTCCCCTCAAGTGTTGGCCTaGGTGAATCACCATCCAAAGGACTTTCCAAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: VHFKETSPQVLA*VNHHPKDFPKN Trigger: GTTCTTTGGAAAGTCCTTTGGATGGTGATTCACTCAGGCCAACACTTGAGGGGACGTTTCCTTAAAGTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CCA 72 bp | TCCATGGGTCTTGCCTCAATATGGGAATCCAATCAGTaGGAATCCGGAGAAGTGACAAGAAACTGCAGCATA | + |
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Preference number: 3 (lower is better) Translates to: SMGLASIWESNQ*ESGEVTRNCSI Trigger: TATGCTGCAGTTTCTTGTCACTTCTCCGGATTCCCACTGATTGGATTCCCATATTGAGGCAAGACCCATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR TCA 72 bp | ACTTTAAGGAAACGTCCCCTCAAGTGTTGGCCTGAGTaGATCACCATCCAAAGGACTTTCCAAAGAACTCTC | + |
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Preference number: 3 (lower is better) Translates to: TLRKRPLKCWPE*ITIQRTFQRTL Trigger: GAGAGTTCTTTGGAAAGTCCTTTGGATGGTGATTCACTCAGGCCAACACTTGAGGGGACGTTTCCTTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR TCA 72 bp | TTATCAAAAGATCAAAGAAAGCTTCTCTCCTATGGATaGGCCGTACGGCTGCTTTATGGGCAGAAATGTTGC | + |
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Preference number: 3 (lower is better) Translates to: LSKDQRKLLSYG*AVRLLYGQKCC Trigger: GCAACATTTCTGCCCATAAAGCAGCCGTACGGCTCATCCATAGGAGAGAAGCTTTCTTTGATCTTTTGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| CDS-3UTR GCA 90 bp | GGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGCCGCAACAGGCAGAAGGTaGTCAGGTTCTGCGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGAGLSSFLCMLCGHPAATGRR*SGSAGP Trigger: TGGCCCCGCAGAACCTGAGCACCTTCTGCCTGTTGC...GGCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGCACTTCCTGGGTCATTTaGAAGCGTCCCGGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPGSRALIVPLHAVWPSCTSWVI*KRPGPS Trigger: GCTGGGACCGGGACGCTTCCAAATGACCCAGGAAGT...GCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGCTGGCTCCTGGCCTGGTaGTCTTGTCCCGGGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: GPGSRALIVPLHAVWPSCWLLAW*SCPGKY Trigger: ATATTTCCCGGGACAAGATCACCAGGCCAGGAGCCA...GCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGATATTCCTGTCCTGCTaGCGAGGGGTTCCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GAWEPGSHRSSACCVAILIFLSC*RGVPPN Trigger: GTTTGGAGGAACCCCTCGTCAGCAGGACAGGAATAT...CAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR GCA 90 bp | CGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGTGCAACAGGCAGAAGGTaGTCAGGTTCTGCGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCYRHHVFSGAWEPGSHRATGRR*SGSAGP Trigger: TGGCCCCGCAGAACCTGAGCACCTTCTGCCTGTTGC...ACGATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | GCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATACTTCCTGGGTCATTTaGAAGCGTCCCGGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARCYRHHVFSGAWEPGSHTSWVI*KRPGPS Trigger: GCTGGGACCGGGACGCTTCCAAATGACCCAGGAAGT...ATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGGATATCACTTCCTCTTaGAATATTCCTGTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GAWEPGSHRSSACCVAILDITSS*NIPVLL Trigger: CAGCAGGACAGGAATATTCCAAGAGGAAGTGATATC...CAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | CGGGCAGCACCAGACGTTAAATCCCCAGAGGGGGAGGTATTAGGTAACCTTCTGCCGGTCCCAGCTGTGTaGTTCTCATCTCTTGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RAAPDVKSPEGEVLGNLLPVPAV*FSSLAD Trigger: GTCGGCAAGAGATGAGAACCACACAGCTGGGACCGG...CAGAAGGTTACCTAATACCTCCCCCTCTGGGGATTTAACGTCTGGTGCTGCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
||
| CDS-3UTR CCA 90 bp | GGGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGTATTGTTATCAAAGTTaGGCAGCCCTTCCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAWEPGSHRSSACCVAILYCYQS*AALPLS Trigger: AGAAAGGGGAAGGGCTGCCCAACTTTGATAACAATA...CAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGCTATTGTTATCAAAGTTaGGCAGCCCTTCCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GPGSRALIVPLHAVWPSCYCYQS*AALPLS Trigger: AGAAAGGGGAAGGGCTGCCCAACTTTGATAACAATA...GCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGCGATCACAGTCCCGATaGGGTACAGCAGCAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLRARCYRHHVFSGAWEPRSQSR*GTAATG Trigger: GCCTGTTGCTGCTGTACCTCATCGGGACTGTGATCG...CGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGCCTTCTAGATCTACGATaGTATCACTTCCTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GPGSRALIVPLHAVWPSCLLDLR*YHFLLE Trigger: TTCCAAGAGGAAGTGATATCATCGTAGATCTAGAAG...GCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCGTACGGCTGCTTTATGGGCAGAAATGTTGCAGAGGTGCTGAGAGGTTGTCGTTTGCCAGGAGCCTaGCTGGCCACAGGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EPYGCFMGRNVAEVLRGCRLPGA*LATGLF Trigger: AAACAAGCCTGTGGCCAGGCAGGCTCCTGGCAAACG...ACAACCTCTCAGCACCTCTGCAACATTTCTGCCCATAAAGCAGCCGTACGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGCGTTTGCCAGGAGCCTaGCTGGCCACAGGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLRARCYRHHVFSGAWEPRLPGA*LATGLF Trigger: AAACAAGCCTGTGGCCAGGCAGGCTCCTGGCAAACG...CGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR GCA 90 bp | CTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGGTTCCCCATCCACATaGGGCTCACCTTCTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LVAIDTMCLVGPGSRALIGSPST*GSPSPI Trigger: TATTGGAGAAGGTGAGCCGCATGTGGATGGGGAACC...GATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | CTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCACAAACCACTTCCTaGGTCATTTGGAAGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LRARCYRHHVFSGAWEPGSQTTS*VIWKRP Trigger: GGGACGCTTCCAAATGACCCAGGAAGTGGTTTGTGA...GCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | CGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTTCACAAACCACTTCCTaGGTCATTTGGAAGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RARCYRHHVFSGAWEPGSSQTTS*VIWKRP Trigger: GGGACGCTTCCAAATGACCCAGGAAGTGGTTTGTGA...AGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGTGGCTCCTGGCCTGGTaGTCTTGTCCCGGGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: FLRARCYRHHVFSGAWEPWLLAW*SCPGKY Trigger: ATATTTCCCGGGACAAGATCACCAGGCCAGGAGCCA...CGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCCAGAGGTAGTGGAAAAGAAAGGATATGGGGGAAGTGGACCTGTTTCAGAGCAACAGGCAGAAGGTaGTCAGGTTCTGCGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PARGSGKERIWGKWTCFRATGRR*SGSAGP Trigger: TGGCCCCGCAGAACCTGAGCACCTTCTGCCTGTTGC...TCTGAAACAGGTCCACTTCCCCCATATCCTTTCTTTTCCACTACCTCTGGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR GCA 90 bp | CTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCTCTCTTGCCGACAGTTaGATTTCCGTTTGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LVAIDTMCLVGPGSRALISLADS*ISVCQE Trigger: CTCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGA...GATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGATGGGAAGACTTCCCATCGGCTCTTTCAAAGTCCAGTTCTCTTCGCTCCGGTCCCAGCTGTGTaGTTCTCATCTCTTGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPDGKTSHRLFQSPVLFAPVPAV*FSSLAD Trigger: GTCGGCAAGAGATGAGAACCACACAGCTGGGACCGG...AGCGAAGAGAACTGGACTTTGAAAGAGCCGATGGGAAGTCTTCCCATCAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178320.2 |
||
| 3UTR CAA 72 bp | TTTCCTTTGCTCGGGCATCCTCTGAGACGTTACTCCTaGAACCTCGGGCAGCACCAGACGTTAAATCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPLLGHPLRRYS*NLGQHQTLNPQ Trigger: CTGGGGATTTAACGTCTGGTGCTGCCCGAGGTTCAAGGAGTAACGTCTCAGAGGATGCCCGAGCAAAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
||
| CDS-3UTR TCA 90 bp | TTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGATATTCCTGTCCTGCTaGCGAGGGGTTCCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLRARCYRHHVFSGAWEPIFLSC*RGVPPN Trigger: GTTTGGAGGAACCCCTCGTCAGCAGGACAGGAATAT...CGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR GCA 90 bp | CGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGGGTTCCCCATCCACATaGGGCTCACCTTCTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: RFLRARCYRHHVFSGAWEGSPST*GSPSPI Trigger: TATTGGAGAAGGTGAGCCGCATGTGGATGGGGAACC...CTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGATGGGAAGACTTCCCATCGGCTCTTTCAAAGTCCAGTTCTCTTCGCTTCCTGGAATTTCTCCTaGGCTTGGGGGTCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPDGKTSHRLFQSPVLFASWNFS*AWGSSG Trigger: CCCTGATGACCCCCAAGCCCAGGAGAAATTCCAGGA...AGCGAAGAGAACTGGACTTTGAAAGAGCCGATGGGAAGTCTTCCCATCAGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGCAGCACCTAGATCCTaGAATTTCTCCTGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLRARCYRHHVFSGAWEPAAPRS*NFSWAW Trigger: CCAAGCCCAGGAGAAATTCCAGGATCTAGGTGCTGC...CGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGTCCACTCACAGCAGCACCTAGATCCTaGAATTTCTCCTGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WKSAVQFTGWQRQLSPLTAAPRS*NFSWAW Trigger: CCAAGCCCAGGAGAAATTCCAGGATCTAGGTGCTGC...TGTGAGTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| 3UTR CAA 72 bp | CTGCATTGTCTGGAAATCAGCAGTTCAGTTCACAGGTaGGCAGCGGCAGCTCAGTCCACTCACAAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LHCLEISSSVHR*AAAAQSTHKHF Trigger: GAAGTGCTTGTGAGTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAGACAATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR TCA 90 bp | AGTCTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCGATCACAGTCCCGATaGGGTACAGCAGCAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLGFFELVAIDTMCLVGRSQSR*GTAATG Trigger: GCCTGTTGCTGCTGTACCTCATCGGGACTGTGATCG...CCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGTCCACTCTCTTGCCGACAGTTaGATTTCCGTTTGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSGNQQFSSQVGSGSSVHSLADS*ISVCQE Trigger: CTCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGA...GTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR GCA 90 bp | CTCCATCACACCATGGAGTCCTATTTATACCCTTCCACCTGTCCTCCATGGGTCGGTTCCCCATCCACATaGGGCTCACCTTCTCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LHHTMESYLYPSTCPPWVGSPST*GSPSPI Trigger: TATTGGAGAAGGTGAGCCGCATGTGGATGGGGAACC...GACCCATGGAGGACAGGTGGAAGGGTATAAATAGGACTCCATGGTGTGATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGCCAAGCTCTGTCTCCATCACACCATGGAGTCCTATTTATACCCTTCCTCCTGGAATTTCTCCTaGGCTTGGGGGTCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQAKLCLHHTMESYLYPSSWNFS*AWGSSG Trigger: CCCTGATGACCCCCAAGCCCAGGAGAAATTCCAGGA...GGAAGGGTATAAATAGGACTCCATGGTGTGATGGAGACAGAGCTTGGCTTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR TCA 90 bp | CGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGTGTCTCCAAAGAAGTGTaGAAAAATGTCCCCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCYRHHVFSGAWEPGSHRVSKEV*KNVPMR Trigger: TCTCATGGGGACATTTTTTCACACTTCTTTGGAGAC...ACGATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGTGGCTCCTGGCCTGGTaGTCTTGTCCCGGGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLGFFELVAIDTMCLVGWLLAW*SCPGKY Trigger: ATATTTCCCGGGACAAGATCACCAGGCCAGGAGCCA...CCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGATGGGAAGACTTCCCATCGGCTCTTTCAAAGTCCAGTTCTCTTCGCTTCTCTTGCCGACAGTTaGATTTCCGTTTGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPDGKTSHRLFQSPVLFASLADS*ISVCQE Trigger: CTCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGA...AGCGAAGAGAACTGGACTTTGAAAGAGCCGATGGGAAGTCTTCCCATCAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178320.2 |
||
| CDS-3UTR GCA 90 bp | TTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTTGATACCTTCTTTTaGTTCCTCTGTCAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FELVAIDTMCLVGPGSRALDTFF*FLCQLF Trigger: GAACAGCTGACAGAGGAAGCAAAAGAAGGTATCAAG...AGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGTCCTGGAATTTCTCCTaGGCTTGGGGGTCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLGFFELVAIDTMCLVGSWNFS*AWGSSG Trigger: CCCTGATGACCCCCAAGCCCAGGAGAAATTCCAGGA...CCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | TTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTGATATCACTTCCTCTTaGAATATTCCTGTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FELVAIDTMCLVGPGSRADITSS*NIPVLL Trigger: CAGCAGGACAGGAATATTCCAAGAGGAAGTGATATC...AGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | GCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATTATTGTTATCAAAGTTaGGCAGCCCTTCCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARCYRHHVFSGAWEPGSHYCYQS*AALPLS Trigger: AGAAAGGGGAAGGGCTGCCCAACTTTGATAACAATA...ATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGTCCACTCACGTCTCCAAAGAAGTGTaGAAAAATGTCCCCATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEISSSVHRLAAAAQSTHVSKEV*KNVPMR Trigger: TCTCATGGGGACATTTTTTCACACTTCTTTGGAGAC...GTGAGTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTCCCTGGAGCAACTCCTGTCTGCATTGTCTGGAAATCAGCAGTTCAGTATATTCCTGTCCTGCTaGCGAGGGGTTCCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KGSLEQLLSALSGNQQFSIFLSC*RGVPPN Trigger: GTTTGGAGGAACCCCTCGTCAGCAGGACAGGAATAT...ACTGAACTGCTGATTTCCAGACAATGCAGACAGGAGTTGCTCCAGGGAACCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGGCCATTGTTGTCTGAATGCAATAGACAGAGCCTCAAACCTCTAGTTCGTTTGCCAGGAGCCTaGCTGGCCACAGGCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FCWPLLSECNRQSLKPLVRLPGA*LATGLF Trigger: AAACAAGCCTGTGGCCAGGCAGGCTCCTGGCAAACG...AACTAGAGGTTTGAGGCTCTGTCTATTGCATTCAGACAACAATGGCCAGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
||
| CDS-3UTR GCA 90 bp | TACTCCTTGAACCTCGGGCAGCACCAGACGTTAAATCCCCAGAGGGGGAGGTATCTTGATACCTTCTTTTaGTTCCTCTGTCAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YSLNLGQHQTLNPQRGRYLDTFF*FLCQLF Trigger: GAACAGCTGACAGAGGAAGCAAAAGAAGGTATCAAG...ATACCTCCCCCTCTGGGGATTTAACGTCTGGTGCTGCCCGAGGTTCAAGGAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
||
| CDS-3UTR GCA 90 bp | TTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGCTTGATACCTTCTTTTaGTTCCTCTGTCAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFELVAIDTMCLVGPGSRLDTFF*FLCQLF Trigger: GAACAGCTGACAGAGGAAGCAAAAGAAGGTATCAAG...CCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGGCCTGAGTGAATCACCATCCAAAGGACTTTCCAAAGAACTCTCGTTTCCGGTCCCAGCTGTGTaGTTCTCATCTCTTGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SVGLSESPSKGLSKELSFPVPAV*FSSLAD Trigger: GTCGGCAAGAGATGAGAACCACACAGCTGGGACCGG...AAACGAGAGTTCTTTGGAAAGTCCTTTGGATGGTGATTCACTCAGGCCAACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CCA 90 bp | ACCTTTCATCACATGTTCTTTCACGTGCCTGTTTCAGTAGAACATCCTCTCTCCACTTCCTGGGTCATTTaGAAGCGTCCCGGTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TFHHMFFHVPVSVEHPLSTSWVI*KRPGPS Trigger: GCTGGGACCGGGACGCTTCCAAATGACCCAGGAAGT...GGAGAGAGGATGTTCTACTGAAACAGGCACGTGAAAGAACATGTGATGAAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CCA 90 bp | GGACCTGTTTCAGAAAGGTTCCCTGGAGCAACTCCTGTCTGCATTGTCTGGAAATCACAAACCACTTCCTaGGTCATTTGGAAGCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVSERFPGATPVCIVWKSQTTS*VIWKRP Trigger: GGGACGCTTCCAAATGACCCAGGAAGTGGTTTGTGA...TTTCCAGACAATGCAGACAGGAGTTGCTCCAGGGAACCTTTCTGAAACAGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR TCA 90 bp | CGGGCAGCACCAGACGTTAAATCCCCAGAGGGGGAGGTATTAGGTAACCTTCTGCTTCTAGATCTACGATaGTATCACTTCCTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RAAPDVKSPEGEVLGNLLLLDLR*YHFLLE Trigger: TTCCAAGAGGAAGTGATATCATCGTAGATCTAGAAG...CAGAAGGTTACCTAATACCTCCCCCTCTGGGGATTTAACGTCTGGTGCTGCCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
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| CDS-3UTR CCA 90 bp | TGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGTCCACTCACAGATATCACTTCCTCTTaGAATATTCCTGTCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WKSAVQFTGWQRQLSPLTDITSS*NIPVLL Trigger: CAGCAGGACAGGAATATTCCAAGAGGAAGTGATATC...TGTGAGTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| CDS-3UTR CCA 90 bp | CTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCTGTCAGCTGTTCTTTTaGAAAGTCCACATCAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVAIDTMCLVGPGSRALICQLFF*KVHIKS Trigger: ACTTTTGATGTGGACTTTCCAAAAGAACAGCTGACA...GATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| 3UTR CAA 72 bp | TCCTATTTATACCCTTCCACCTGTCCTCCATGGGTCTaGCCTCAATATGGGAATCCAATCAGTGGGAATCCG | + |
|
Preference number: 4 (lower is better) Translates to: SYLYPSTCPPWV*PQYGNPISGNP Trigger: CGGATTCCCACTGATTGGATTCCCATATTGAGGCAAGACCCATGGAGGACAGGTGGAAGGGTATAAATAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CAA 72 bp | TTTCAGAAAGGTTCCCTGGAGCAACTCCTGTCTGCATaGTCTGGAAATCAGCAGTTCAGTTCACAGGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FQKGSLEQLLSA*SGNQQFSSQVG Trigger: GCCAACCTGTGAACTGAACTGCTGATTTCCAGACAATGCAGACAGGAGTTGCTCCAGGGAACCTTTCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| CDS-3UTR TCA 90 bp | ATGCAGCTCAAATGCAGTGTAAGGCAGACCAATACCTTTGTGTCATTAGCAAATCGATCACAGTCCCGATaGGGTACAGCAGCAACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MQLKCSVRQTNTFVSLANRSQSR*GTAATG Trigger: GCCTGTTGCTGCTGTACCTCATCGGGACTGTGATCG...ATTTGCTAATGACACAAAGGTATTGGTCTGCCTTACACTGCATTTGAGCTGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR GCA 90 bp | TGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGTCCACTCACATTCCACAAAATTTCCTaGGTACACTTCTTCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WKSAVQFTGWQRQLSPLTFHKIS*VHFFQS Trigger: ACTCTGGAAGAAGTGTACGCAGGAAATTTTGTGGAA...TGTGAGTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CCA 90 bp | GCTCAGCTAGCTGTACCAGCAAGCCAAGCTCTGTCTCCATCACACCATGGAGTCTGTCAGCTGTTCTTTTaGAAAGTCCACATCAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: AQLAVPASQALSPSHHGVCQLFF*KVHIKS Trigger: ACTTTTGATGTGGACTTTCCAAAAGAACAGCTGACA...GACTCCATGGTGTGATGGAGACAGAGCTTGGCTTGCTGGTACAGCTAGCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| CDS-3UTR GCA 90 bp | CCTGCCAGAGGTAGTGGAAAAGAAAGGATATGGGGGAAGTGGACCTGTTTCAGACTTGATACCTTCTTTTaGTTCCTCTGTCAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PARGSGKERIWGKWTCFRLDTFF*FLCQLF Trigger: GAACAGCTGACAGAGGAAGCAAAAGAAGGTATCAAG...TCTGAAACAGGTCCACTTCCCCCATATCCTTTCTTTTCCACTACCTCTGGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CCA 90 bp | CGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGTGTCAGCTGTTCTTTTaGAAAGTCCACATCAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RFLRARCYRHHVFSGAWECQLFF*KVHIKS Trigger: ACTTTTGATGTGGACTTTCCAAAAGAACAGCTGACA...CTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGCCAAGCTCTGTCTCCATCACACCATGGAGTCCTATTTATACCCTTCCCTTCTAGATCTACGATaGTATCACTTCCTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QQAKLCLHHTMESYLYPSLLDLR*YHFLLE Trigger: TTCCAAGAGGAAGTGATATCATCGTAGATCTAGAAG...GGAAGGGTATAAATAGGACTCCATGGTGTGATGGAGACAGAGCTTGGCTTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR GCA 90 bp | TCTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTTCCACAAAATTTCCTaGGTACACTTCTTCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: STRFLRARCYRHHVFSGAFHKIS*VHFFQS Trigger: ACTCTGGAAGAAGTGTACGCAGGAAATTTTGTGGAA...GGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
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| CDS-3UTR TCA 90 bp | TTAGCAAATAACCTTTCATCACATGTTCTTTCACGTGCCTGTTTCAGTAGAACATGGCTCCTGGCCTGGTaGTCTTGTCCCGGGAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LANNLSSHVLSRACFSRTWLLAW*SCPGKY Trigger: ATATTTCCCGGGACAAGATCACCAGGCCAGGAGCCA...TGTTCTACTGAAACAGGCACGTGAAAGAACATGTGATGAAAGGTTATTTGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CCA 90 bp | CTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTTGTCAGCTGTTCTTTTaGAAAGTCCACATCAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGFFELVAIDTMCLVGPCQLFF*KVHIKS Trigger: ACTTTTGATGTGGACTTTCCAAAAGAACAGCTGACA...AGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CCA 90 bp | TTAGCAAATAACCTTTCATCACATGTTCTTTCACGTGCCTGTTTCAGTAGAACATATTGTTATCAAAGTTaGGCAGCCCTTCCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LANNLSSHVLSRACFSRTYCYQS*AALPLS Trigger: AGAAAGGGGAAGGGCTGCCCAACTTTGATAACAATA...TGTTCTACTGAAACAGGCACGTGAAAGAACATGTGATGAAAGGTTATTTGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| 3UTR CAA 72 bp | ACGGGAAAATATGTTCTCTCAAAGACAGTGAGGTCTTaGTGTAACTTTAATTCATGTAGCTCAGTCTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGKYVLSKTVRS*CNFNSCSSVSS Trigger: ACTAGAGACTGAGCTACATGAATTAAAGTTACACAAAGACCTCACTGTCTTTGAGAGAACATATTTTCCCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | GGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGCCCCTGGCCTGGTGATCTaGTCCCGGGAAATATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: GLGAGLSSFLCMLCGHPAPGLVI*SREIWT Trigger: GGTCCATATTTCCCGGGACAAGATCACCAGGCCAGG...GGCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | GGGGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGCCTTTCTTCCACAGCTaGGCTCCTGGCCTGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: GAWEPGSHRSSACCVAILPFFHS*APGLVI Trigger: GATCACCAGGCCAGGAGCCAAGCTGTGGAAGAAAGG...CAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | GGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGCCCTTCTGCACGGGGCCTaGTTTGAGAAGCTGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLGAGLSSFLCMLCGHPALLHGA*FEKLLD Trigger: ATCAAGCAGCTTCTCAAACAAGGCCCCGTGCAGAAG...GGCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS GCA 90 bp | AGCGTCCCGGTCCCAGCTGTGTGGTTCTCATCTCTTGCCGACAGTTaGATTTCCGTTTGCCAGGAGCCTGCCTGGCCACAGGCTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVPVPAVWFSSLADS*ISVCQEPAWPQACF Trigger: GAAACAAGCCTGTGGCCAGGCAGGCTCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGATGAGAACCACACAGCTGGGACCGGGACGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | CGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTGAATTTCTCCTGGGCTaGGGGGTCATCAGGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RARCYRHHVFSGAWEPGSEFLLG*GVIRVP Trigger: CGGAACCCTGATGACCCCCAAGCCCAGGAGAAATTC...AGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | ACGTTACTCCTTGAACCTCGGGCAGCACCAGACGTTAAATCCCCAGAGGGGGAGCACTTCCTGGGTCATTaGGAAGCGTCCCGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TLLLEPRAAPDVKSPEGEHFLGH*EASRSQ Trigger: CTGGGACCGGGACGCTTCCAAATGACCCAGGAAGTG...CTCCCCCTCTGGGGATTTAACGTCTGGTGCTGCCCGAGGTTCAAGGAGTAACGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
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| CDS-3UTR CAA 90 bp | GGCCTGGGAGCCGGGCTCTCATCGTTCCTCTGCATGCTGTGTGGCCATCCTGCCCGGTGCTTGACAACTTaGATTCGGAACCGTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLGAGLSSFLCMLCGHPARCLTT*IRNRKS Trigger: AGACTTACGGTTCCGAATCAAAGTTGTCAAGCACCG...GGCAGGATGGCCACACAGCATGCAGAGGAACGATGAGAGCCCGGCTCCCAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS TCA 90 bp | TGGGCAGCCCTTCCCCTTTCTTCCACAGCTTGGCTCCTGGCCTGGTaGTCTTGTCCCGGGAAATATGGACCTTGTGACCATCCAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WAALPLSSTAWLLAW*SCPGKYGPCDHPGE Trigger: CTCACCTGGATGGTCACAAGGTCCATATTTCCCGGGACAAGATCACCAGGCCAGGAGCCAAGCTGTGGAAGAAAGGGGAAGGGCTGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | CGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGTCCTGGCCTGGTGATCTaGTCCCGGGAAATATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RCYRHHVFSGAWEPGSHRPGLVI*SREIWT Trigger: GGTCCATATTTCCCGGGACAAGATCACCAGGCCAGG...ACGATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | CGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGTCCTTTCTTCCACAGCTaGGCTCCTGGCCTGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: RCYRHHVFSGAWEPGSHRPFFHS*APGLVI Trigger: GATCACCAGGCCAGGAGCCAAGCTGTGGAAGAAAGG...ACGATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | GCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCCTTTCTTCCACAGCTaGGCTCCTGGCCTGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: ARCYRHHVFSGAWEPGSHPFFHS*APGLVI Trigger: GATCACCAGGCCAGGAGCCAAGCTGTGGAAGAAAGG...ATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | GAGCCGTACGGCTGCTTTATGGGCAGAAATGTTGCAGAGGTGCTGAGAGGTTGTGAATTTCTCCTGGGCTaGGGGGTCATCAGGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EPYGCFMGRNVAEVLRGCEFLLG*GVIRVP Trigger: CGGAACCCTGATGACCCCCAAGCCCAGGAGAAATTC...ACAACCTCTCAGCACCTCTGCAACATTTCTGCCCATAAAGCAGCCGTACGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| CDS-3UTR CAA 90 bp | CTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTGCCTGGCCACAGGCTaGTTTCTAACTACTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LRARCYRHHVFSGAWEPGCLATG*FLTTST Trigger: TGTGGAAGTAGTTAGAAACAAGCCTGTGGCCAGGCA...GCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
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| CDS CCA 90 bp | AAACCACTTCCTGGGTCATTTGGAAGCGTCCCGGTCCCAGCTGTGTaGTTCTCATCTCTTGCCGACAGTTGCATTTCCGTTTGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KPLPGSFGSVPVPAV*FSSLADSCISVCQE Trigger: CTCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGATGAGAACCACACAGCTGGGACCGGGACGCTTCCAAATGACCCAGGAAGTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTGATGGGAAGACTTCCCATCGGCTCTTTCAAAGTCCAGTTCTCTTCGCTCCTGGCCTGGTGATCTaGTCCCGGGAAATATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: LPDGKTSHRLFQSPVLFAPGLVI*SREIWT Trigger: GGTCCATATTTCCCGGGACAAGATCACCAGGCCAGG...AGCGAAGAGAACTGGACTTTGAAAGAGCCGATGGGAAGTCTTCCCATCAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | CTCCATCACACCATGGAGTCCTATTTATACCCTTCCACCTGTCCTCCATGGGTCCCTGGCCTGGTGATCTaGTCCCGGGAAATATGGACC | + |
|
Preference number: 5 (lower is better) Translates to: LHHTMESYLYPSTCPPWVPGLVI*SREIWT Trigger: GGTCCATATTTCCCGGGACAAGATCACCAGGCCAGG...GACCCATGGAGGACAGGTGGAAGGGTATAAATAGGACTCCATGGTGTGATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| CDS-3UTR CAA 90 bp | CTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGAATTTCTCCTGGGCTaGGGGGTCATCAGGGTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLGFFELVAIDTMCLVGPEFLLG*GVIRVP Trigger: CGGAACCCTGATGACCCCCAAGCCCAGGAGAAATTC...AGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | GTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGTTATCTCTTGCCGACAGTaGCATTTCCGTTTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VAIDTMCLVGPGSRALIVISCRQ*HFRLPG Trigger: TCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGAT...AACGATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | GGTAGTGGAAAAGAAAGGATATGGGGGAAGTGGACCTGTTTCAGAAAGGTTCCCCACTTCCTGGGTCATTaGGAAGCGTCCCGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSGKERIWGKWTCFRKVPHFLGH*EASRSQ Trigger: CTGGGACCGGGACGCTTCCAAATGACCCAGGAAGTG...GGGAACCTTTCTGAAACAGGTCCACTTCCCCCATATCCTTTCTTTTCCACTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CAA 90 bp | AGTCTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCACTTCCTGGGTCATTaGGAAGCGTCCCGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLGFFELVAIDTMCLVGHFLGH*EASRSQ Trigger: CTGGGACCGGGACGCTTCCAAATGACCCAGGAAGTG...CCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | TTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCGGTGCTTGACAACTTaGATTCGGAACCGTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FELVAIDTMCLVGPGSRARCLTT*IRNRKS Trigger: AGACTTACGGTTCCGAATCAAAGTTGTCAAGCACCG...AGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | CGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTGAGCCCTTGATGTTATaGTTATCAAAGTTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RARCYRHHVFSGAWEPGSEPLML*LSKLGS Trigger: GCTGCCCAACTTTGATAACAATAACATCAAGGGCTC...AGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGAGACGTTACTCCTTGAACCTCGGGCAGCACCAGACGTTAAATCCCCACTTCTGCACGGGGCCTaGTTTGAGAAGCTGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSETLLLEPRAAPDVKSPLLHGA*FEKLLD Trigger: ATCAAGCAGCTTCTCAAACAAGGCCCCGTGCAGAAG...TGGGGATTTAACGTCTGGTGCTGCCCGAGGTTCAAGGAGTAACGTCTCAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
||
| CDS-3UTR CAA 90 bp | TTGTCTGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGTCCACCTTCTGCACGGGGCCTaGTTTGAGAAGCTGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSGNQQFSSQVGSGSSVHLLHGA*FEKLLD Trigger: ATCAAGCAGCTTCTCAAACAAGGCCCCGTGCAGAAG...GTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CAA 90 bp | GCCATCCTGCCTGATGGGAAGACTTCCCATCGGCTCTTTCAAAGTCCAGTTCTCCTTCTGCACGGGGCCTaGTTTGAGAAGCTGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: AILPDGKTSHRLFQSPVLLLHGA*FEKLLD Trigger: ATCAAGCAGCTTCTCAAACAAGGCCCCGTGCAGAAG...GAGAACTGGACTTTGAAAGAGCCGATGGGAAGTCTTCCCATCAGGCAGGATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS CCA 90 bp | AATTTGACATTAGGGCACTCGTCACAAACCACTTCCTGGGTCATTTaGAAGCGTCCCGGTCCCAGCTGTGTGGTTCTCATCTCTTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: NLTLGHSSQTTSWVI*KRPGPSCVVLISCR Trigger: TCGGCAAGAGATGAGAACCACACAGCTGGGACCGGGACGCTTCCAAATGACCCAGGAAGTGGTTTGTGACGAGTGCCCTAATGTCAAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | TATGGGGGAAGTGGACCTGTTTCAGAAAGGTTCCCTGGAGCAACTCCTGTCTGCATCTCTTGCCGACAGTaGCATTTCCGTTTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YGGSGPVSERFPGATPVCISCRQ*HFRLPG Trigger: TCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGAT...GCAGACAGGAGTTGCTCCAGGGAACCTTTCTGAAACAGGTCCACTTCCCCCATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CAA 90 bp | CTTAAGGCTGTGATTCACAGGAGCTCTGTCCTCCTAGAATCAGCTGTCAGACATCCTTTCTTCCACAGCTaGGCTCCTGGCCTGGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LKAVIHRSSVLLESAVRHPFFHS*APGLVI Trigger: GATCACCAGGCCAGGAGCCAAGCTGTGGAAGAAAGG...ATGTCTGACAGCTGATTCTAGGAGGACAGAGCTCCTGTGAATCACAGCCTTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CAA 90 bp | CGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGTTTATTGTTATCAAAGTaGGGCAGCCCTTCCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RCYRHHVFSGAWEPGSHRLLLSK*GSPSPF Trigger: GAAAGGGGAAGGGCTGCCCAACTTTGATAACAATAA...ACGATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | TTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTTTATTGTTATCAAAGTaGGGCAGCCCTTCCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FELVAIDTMCLVGPGSRALLLSK*GSPSPF Trigger: GAAAGGGGAAGGGCTGCCCAACTTTGATAACAATAA...AGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | CGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGTGAGCCCTTGATGTTATaGTTATCAAAGTTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCYRHHVFSGAWEPGSHREPLML*LSKLGS Trigger: GCTGCCCAACTTTGATAACAATAACATCAAGGGCTC...ACGATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCCTGATGGGAAGACTTCCCATCGGCTCTTTCAAAGTCCAGTTCTCTTCGTGCACGGGGCCTTGTTaGAGAAGCTGCTTGATACCT | + |
|
Preference number: 5 (lower is better) Translates to: SCLMGRLPIGSFKVQFSSCTGPC*RSCLIP Trigger: AGGTATCAAGCAGCTTCTCAAACAAGGCCCCGTGCA...CGAAGAGAACTGGACTTTGAAAGAGCCGATGGGAAGTCTTCCCATCAGGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | CGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCGGTGCTTGACAACTTaGATTCGGAACCGTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RFLRARCYRHHVFSGAWERCLTT*IRNRKS Trigger: AGACTTACGGTTCCGAATCAAAGTTGTCAAGCACCG...CTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | GCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATTCAAATATCCGGTGCTaGACAACTTTGATTCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ARCYRHHVFSGAWEPGSHSNIRC*TTLIRN Trigger: GTTCCGAATCAAAGTTGTCAAGCACCGGATATTTGA...ATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | TTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTTCAAATATCCGGTGCTaGACAACTTTGATTCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FELVAIDTMCLVGPGSRASNIRC*TTLIRN Trigger: GTTCCGAATCAAAGTTGTCAAGCACCGGATATTTGA...AGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAAATCAGCAGTTCAGTTCACAGGTTGGCAGCGGCAGCTCAGTCCACTCACTTATTGTTATCAAAGTaGGGCAGCCCTTCCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LEISSSVHRLAAAAQSTHLLLSK*GSPSPF Trigger: GAAAGGGGAAGGGCTGCCCAACTTTGATAACAATAA...GTGAGTGGACTGAGCTGCCGCTGCCAACCTGTGAACTGAACTGCTGATTTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CAA 90 bp | TTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGAGCCCTTGATGTTATaGTTATCAAAGTTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFELVAIDTMCLVGPGSREPLML*LSKLGS Trigger: GCTGCCCAACTTTGATAACAATAACATCAAGGGCTC...CCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | CAGCAAGCCAAGCTCTGTCTCCATCACACCATGGAGTCCTATTTATACCCTTCCTGCACGGGGCCTTGTTaGAGAAGCTGCTTGATACCT | + |
|
Preference number: 5 (lower is better) Translates to: QQAKLCLHHTMESYLYPSCTGPC*RSCLIP Trigger: AGGTATCAAGCAGCTTCTCAAACAAGGCCCCGTGCA...GGAAGGGTATAAATAGGACTCCATGGTGTGATGGAGACAGAGCTTGGCTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS TCA 90 bp | CAGGTGAGTTATGTCCATCTCAAAGCCAACCAGAGCCTCAACCAGTaGGACGGTCACATTTGTGTACAGGTCATCCCCTCTCCTCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QVSYVHLKANQSLNQ*DGHICVQVIPSPLK Trigger: TTTGAGAGGAGAGGGGATGACCTGTACACAAATGTGACCGTCTCACTGGTTGAGGCTCTGGTTGGCTTTGAGATGGACATAACTCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS CCA 90 bp | TCATTCACTAATTTGACATTAGGGCACTCGTCACAAACCACTTCCTaGGTCATTTGGAAGCGTCCCGGTCCCAGCTGTGTGGTTCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SFTNLTLGHSSQTTS*VIWKRPGPSCVVLI Trigger: GATGAGAACCACACAGCTGGGACCGGGACGCTTCCAAATGACCCAGGAAGTGGTTTGTGACGAGTGCCCTAATGTCAAATTAGTGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAAGCCAAGCTCTGTCTCCATCACACCATGGAGTCCTATTTATACCCTTCCTGCCTGGCCACAGGCTaGTTTCTAACTACTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QQAKLCLHHTMESYLYPSCLATG*FLTTST Trigger: TGTGGAAGTAGTTAGAAACAAGCCTGTGGCCAGGCA...GGAAGGGTATAAATAGGACTCCATGGTGTGATGGAGACAGAGCTTGGCTTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| CDS-3UTR CAA 90 bp | TTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTTCTTCATTCACTAATTaGACATTAGGGCACTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FELVAIDTMCLVGPGSRASSFTN*TLGHSS Trigger: TGACGAGTGCCCTAATGTCAAATTAGTGAATGAAGA...AGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | GTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGGGCTCTCATCGTTTCAAATATCCGGTGCTaGACAACTTTGATTCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VAIDTMCLVGPGSRALIVSNIRC*TTLIRN Trigger: GTTCCGAATCAAAGTTGTCAAGCACCGGATATTTGA...AACGATGAGAGCCCGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | GCTCAGCTAGCTGTACCAGCAAGCCAAGCTCTGTCTCCATCACACCATGGAGTCTCAAATATCCGGTGCTaGACAACTTTGATTCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AQLAVPASQALSPSHHGVSNIRC*TTLIRN Trigger: GTTCCGAATCAAAGTTGTCAAGCACCGGATATTTGA...GACTCCATGGTGTGATGGAGACAGAGCTTGGCTTGCTGGTACAGCTAGCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS-3UTR CAA 90 bp | AGTCTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGTGCACGGGGCCTTGTTaGAGAAGCTGCTTGATACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLGFFELVAIDTMCLVGCTGPC*RSCLIP Trigger: AGGTATCAAGCAGCTTCTCAAACAAGGCCCCGTGCA...CCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS GCA 90 bp | GTTCTCATCTCTTGCCGACAGTTGCATTTCCGTTTGCCAGGAGCCTaGCTGGCCACAGGCTTGTTTCTAACTACTTCCACAAAATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLISCRQLHFRLPGA*LATGLFLTTSTKFP Trigger: AGGAAATTTTGTGGAAGTAGTTAGAAACAAGCCTGTGGCCAGGCAGGCTCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGATGAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | AGTCTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGATCTCTTGCCGACAGTaGCATTTCCGTTTGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLLGFFELVAIDTMCLVGISCRQ*HFRLPG Trigger: TCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGAT...CCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | CAGCAAGCCAAGCTCTGTCTCCATCACACCATGGAGTCCTATTTATACCCTTCCCGGTGCTTGACAACTTaGATTCGGAACCGTAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QQAKLCLHHTMESYLYPSRCLTT*IRNRKS Trigger: AGACTTACGGTTCCGAATCAAAGTTGTCAAGCACCG...GGAAGGGTATAAATAGGACTCCATGGTGTGATGGAGACAGAGCTTGGCTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| CDS-3UTR CAA 90 bp | TTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGCCGCTGTCAGCTGTTCTTTaGGAAAGTCCACATCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLRARCYRHHVFSGAWEPLSAVL*ESPHQK Trigger: CTTTTGATGTGGACTTTCCAAAAGAACAGCTGACAG...CGGCTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | CGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTGGGAGTCTTCATTCACTAATTaGACATTAGGGCACTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RFLRARCYRHHVFSGAWESSFTN*TLGHSS Trigger: TGACGAGTGCCCTAATGTCAAATTAGTGAATGAAGA...CTCCCAGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004574.14 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | TATGGGGGAAGTGGACCTGTTTCAGAAAGGTTCCCTGGAGCAACTCCTGTCTGCTCTTCATTCACTAATTaGACATTAGGGCACTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YGGSGPVSERFPGATPVCSSFTN*TLGHSS Trigger: TGACGAGTGCCCTAATGTCAAATTAGTGAATGAAGA...GCAGACAGGAGTTGCTCCAGGGAACCTTTCTGAAACAGGTCCACTTCCCCCATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| CDS-3UTR CAA 90 bp | TCTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTTATTGTTATCAAAGTaGGGCAGCCCTTCCCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: STRFLRARCYRHHVFSGALLLSK*GSPSPF Trigger: GAAAGGGGAAGGGCTGCCCAACTTTGATAACAATAA...GGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | CTGCCTGATGGGAAGACTTCCCATCGGCTCTTTCAAAGTCCAGTTCTCTTCGCTCTGTCAGCTGTTCTTTaGGAAAGTCCACATCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPDGKTSHRLFQSPVLFALSAVL*ESPHQK Trigger: CTTTTGATGTGGACTTTCCAAAAGAACAGCTGACAG...AGCGAAGAGAACTGGACTTTGAAAGAGCCGATGGGAAGTCTTCCCATCAGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCTGGCCATTGTTGTCTGAATGCAATAGACAGAGCCTCAAACCTCTAGTTTGCACGGGGCCTTGTTaGAGAAGCTGCTTGATACCT | + |
|
Preference number: 5 (lower is better) Translates to: FCWPLLSECNRQSLKPLVCTGPC*RSCLIP Trigger: AGGTATCAAGCAGCTTCTCAAACAAGGCCCCGTGCA...AACTAGAGGTTTGAGGCTCTGTCTATTGCATTCAGACAACAATGGCCAGCAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004574.14 |
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| CDS-3UTR CAA 90 bp | CTACTCGGTTTCTTCGAGCTCGTTGCTATAGACACCATGTGTTTAGTGGGGCCTCTGTCAGCTGTTCTTTaGGAAAGTCCACATCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLGFFELVAIDTMCLVGPLSAVL*ESPHQK Trigger: CTTTTGATGTGGACTTTCCAAAAGAACAGCTGACAG...AGGCCCCACTAAACACATGGTGTCTATAGCAACGAGCTCGAAGAAACCGAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000178320.2 |
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| CDS-3UTR CAA 90 bp | CTTAAGGCTGTGATTCACAGGAGCTCTGTCCTCCTAGAATCAGCTGTCAGACATCTGTCAGCTGTTCTTTaGGAAAGTCCACATCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKAVIHRSSVLLESAVRHLSAVL*ESPHQK Trigger: CTTTTGATGTGGACTTTCCAAAAGAACAGCTGACAG...ATGTCTGACAGCTGATTCTAGGAGGACAGAGCTCCTGTGAATCACAGCCTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
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| CDS-3UTR CAA 90 bp | ATGCAGCTCAAATGCAGTGTAAGGCAGACCAATACCTTTGTGTCATTAGCAAATGAGCCCTTGATGTTATaGTTATCAAAGTTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MQLKCSVRQTNTFVSLANEPLML*LSKLGS Trigger: GCTGCCCAACTTTGATAACAATAACATCAAGGGCTC...ATTTGCTAATGACACAAAGGTATTGGTCTGCCTTACACTGCATTTGAGCTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166487.10 |
||
| CDS GCA 72 bp | AAGCGTCCCGGTCCCAGCTGTGTGGTTCTCATCTCTTaGCGACAGTTGCATTTCCGTTTGCCAGGAGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KRPGPSCVVLIS*RQLHFRLPGAC Trigger: GCAGGCTCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGATGAGAACCACACAGCTGGGACCGGGACGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS CAA 72 bp | GAAGCGTCCCGGTCCCAGCTGTGTGGTTCTCATCTCTaGCCGACAGTTGCATTTCCGTTTGCCAGGAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EASRSQLCGSHL*PTVAFPFARSL Trigger: CAGGCTCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGATGAGAACCACACAGCTGGGACCGGGACGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS CCA 72 bp | CCTGGGTCATTTGGAAGCGTCCCGGTCCCAGCTGTGTaGTTCTCATCTCTTGCCGACAGTTGCATTTCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: PGSFGSVPVPAV*FSSLADSCISV Trigger: AACGGAAATGCAACTGTCGGCAAGAGATGAGAACCACACAGCTGGGACCGGGACGCTTCCAAATGACCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS CCA 72 bp | TTAGGGCACTCGTCACAAACCACTTCCTGGGTCATTTaGAAGCGTCCCGGTCCCAGCTGTGTGGTTCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LGHSSQTTSWVI*KRPGPSCVVLI Trigger: GATGAGAACCACACAGCTGGGACCGGGACGCTTCCAAATGACCCAGGAAGTGGTTTGTGACGAGTGCCCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS CAA 72 bp | TCAAAGTTGGGCAGCCCTTCCCCTTTCTTCCACAGCTaGGCTCCTGGCCTGGTGATCTTGTCCCGGGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: SKLGSPSPFFHS*APGLVILSREI Trigger: TATTTCCCGGGACAAGATCACCAGGCCAGGAGCCAAGCTGTGGAAGAAAGGGGAAGGGCTGCCCAACTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS CAA 90 bp | CCCAGCTGTGTGGTTCTCATCTCTTGCCGACAGTTGCATTTCCGTTaGCCAGGAGCCTGCCTGGCCACAGGCTTGTTTCTAACTACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PSCVVLISCRQLHFR*PGACLATGLFLTTS Trigger: GGAAGTAGTTAGAAACAAGCCTGTGGCCAGGCAGGCTCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGATGAGAACCACACAGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS TCA 72 bp | TCTTATAGAAATCTCGCCCGGCGATCACAGTCCCGATaGGGTACAGCAGCAACAGGCAGAAGGTGCTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SYRNLARRSQSR*GTAATGRRCSG Trigger: ACCTGAGCACCTTCTGCCTGTTGCTGCTGTACCTCATCGGGACTGTGATCGCCGGGCGAGATTTCTATAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS TCA 72 bp | CTTCCCCTTTCTTCCACAGCTTGGCTCCTGGCCTGGTaGTCTTGTCCCGGGAAATATGGACCTTGTGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: LPLSSTAWLLAW*SCPGKYGPCDH Trigger: ATGGTCACAAGGTCCATATTTCCCGGGACAAGATCACCAGGCCAGGAGCCAAGCTGTGGAAGAAAGGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS CAA 72 bp | GTGGTTCTCATCTCTTGCCGACAGTTGCATTTCCGTTaGCCAGGAGCCTGCCTGGCCACAGGCTTGTTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: VVLISCRQLHFR*PGACLATGLFL Trigger: TAGAAACAAGCCTGTGGCCAGGCAGGCTCCTGGCAAACGGAAATGCAACTGTCGGCAAGAGATGAGAACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS CAA 72 bp | ATTAGGGCACTCGTCACAAACCACTTCCTGGGTCATTaGGAAGCGTCCCGGTCCCAGCTGTGTGGTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: IRALVTNHFLGH*EASRSQLCGSH Trigger: ATGAGAACCACACAGCTGGGACCGGGACGCTTCCAAATGACCCAGGAAGTGGTTTGTGACGAGTGCCCTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS CAA 72 bp | GCCCTGCAGCCCGTTGTACACCTTCTGCACGGGGCCTaGTTTGAGAAGCTGCTTGATACCTTCTTTTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ALQPVVHLLHGA*FEKLLDTFFCF Trigger: GAAGCAAAAGAAGGTATCAAGCAGCTTCTCAAACAAGGCCCCGTGCAGAAGGTGTACAACGGGCTGCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000166487.10 ENSMUST00000178320.2 |
||
| CDS CAA 90 bp | TACAGGTCATCCCCTCTCCTCTCAAATATCCGGTGCTTGACAACTTaGATTCGGAACCGTAAGTCTCCGGGTTCCCCATCCACATGCGGC | + |
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Preference number: 6 (lower is better) Translates to: YRSSPLLSNIRCLTT*IRNRKSPGSPSTCG Trigger: GCCGCATGTGGATGGGGAACCCGGAGACTTACGGTTCCGAATCAAAGTTGTCAAGCACCGGATATTTGAGAGGAGAGGGGATGACCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS GCA 72 bp | TCTTGCCGACAGTTGCATTTCCGTTTGCCAGGAGCCTaGCTGGCCACAGGCTTGTTTCTAACTACTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: SCRQLHFRLPGA*LATGLFLTTST Trigger: TGTGGAAGTAGTTAGAAACAAGCCTGTGGCCAGGCAGGCTCCTGGCAAACGGAAATGCAACTGTCGGCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS CCA 72 bp | AATTTGACATTAGGGCACTCGTCACAAACCACTTCCTaGGTCATTTGGAAGCGTCCCGGTCCCAGCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: NLTLGHSSQTTS*VIWKRPGPSCV Trigger: CACACAGCTGGGACCGGGACGCTTCCAAATGACCCAGGAAGTGGTTTGTGACGAGTGCCCTAATGTCAAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS CAA 72 bp | TCCCCTCTCCTCTCAAATATCCGGTGCTTGACAACTTaGATTCGGAACCGTAAGTCTCCGGGTTCCCCATCC | + |
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Preference number: 6 (lower is better) Translates to: SPLLSNIRCLTT*IRNRKSPGSPS Trigger: GGATGGGGAACCCGGAGACTTACGGTTCCGAATCAAAGTTGTCAAGCACCGGATATTTGAGAGGAGAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS CAA 90 bp | TTATTGTTATCAAAGTTGGGCAGCCCTTCCCCTTTCTTCCACAGCTaGGCTCCTGGCCTGGTGATCTTGTCCCGGGAAATATGGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: LLLSKLGSPSPFFHS*APGLVILSREIWTL Trigger: CAAGGTCCATATTTCCCGGGACAAGATCACCAGGCCAGGAGCCAAGCTGTGGAAGAAAGGGGAAGGGCTGCCCAACTTTGATAACAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS TCA 72 bp | TATGTCCATCTCAAAGCCAACCAGAGCCTCAACCAGTaGGACGGTCACATTTGTGTACAGGTCATCCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: YVHLKANQSLNQ*DGHICVQVIPS Trigger: AGAGGGGATGACCTGTACACAAATGTGACCGTCTCACTGGTTGAGGCTCTGGTTGGCTTTGAGATGGACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS TCA 72 bp | ATGATATCACTTCCTCTTGGAATATTCCTGTCCTGCTaGCGAGGGGTTCCTCCAAACATGAAGCCAAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: MISLPLGIFLSC*RGVPPNMKPKS Trigger: AGACTTTGGCTTCATGTTTGGAGGAACCCCTCGTCAGCAGGACAGGAATATTCCAAGAGGAAGTGATATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004574.14 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS CAA 90 bp | GGAAAGTCCACATCAAAAGTGATTATCAAAGAGCCCTTGATGTTATaGTTATCAAAGTTGGGCAGCCCTTCCCCTTTCTTCCACAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: GKSTSKVIIKEPLML*LSKLGSPSPFFHSL Trigger: CAAGCTGTGGAAGAAAGGGGAAGGGCTGCCCAACTTTGATAACAATAACATCAAGGGCTCTTTGATAATCACTTTTGATGTGGACTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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| CDS CAA 72 bp | ACATCAAAAGTGATTATCAAAGAGCCCTTGATGTTATaGTTATCAAAGTTGGGCAGCCCTTCCCCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TSKVIIKEPLML*LSKLGSPSPFF Trigger: GAAGAAAGGGGAAGGGCTGCCCAACTTTGATAACAATAACATCAAGGGCTCTTTGATAATCACTTTTGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004574.14 ENSMUST00000133013.2 ENSMUST00000166487.10 ENSMUST00000178320.2 |
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