Pregenerated sensors for DNAJB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005483Ensembl transcript IDs: ENSMUST00000005620.10, ENSMUST00000212300.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCTGGCTGGCCAGGCCCCAGAACCTGGAAGGAGGCTGGCCCTGTaGTCCTGCAACCAGGTATTGCTTGTGATGCTGGCCTGGCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: LLAGQAPEPGRRLAL*SCNQVLLVMLAWQS Trigger: GGACTGCCAGGCCAGCATCACAAGCAATACCTGGTTGCAGGACCACAGGGCCAGCCTCCTTCCAGGTTCTGGGGCCTGGCCAGCCAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR GCA 90 bp | TCACATGACAGCCAGACTAAGGACAACAGAGGGCAAGAGTCCAGTTaGAGGCCTGCCTCACACCCTTGGGCAGGAGCTGGGGTGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: SHDSQTKDNRGQESS*RPASHPWAGAGVQR Trigger: CCTCTGCACCCCAGCTCCTGCCCAAGGGTGTGAGGCAGGCCTGCAACTGGACTCTTGCCCTCTGTTGTCCTTAGTCTGGCTGTCATGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR TCA 90 bp | GTCTACCTCTGGACCAGCAAGTACTGTGACTGTAAGCCAGCCATCTaGTGTCAATGGAGCCAGAGGTCCAGGGGATCTCCTGGCTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: VYLWTSKYCDCKPAI*CQWSQRSRGSPGWP Trigger: TGGCCAGCCAGGAGATCCCCTGGACCTCTGGCTCCATTGACATCAGATGGCTGGCTTACAGTCACAGTACTTGCTGGTCCAGAGGTAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR TCA 90 bp | ACTTTCACGCCCAGGTCTGATCCCATCACAGCCCTGGACAGTAGTTaGCAGGGACTGCTTTCGTCTGAGTGCACACCAGCTTCCAATGGA | + |
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Preference number: 1 (lower is better) Translates to: TFTPRSDPITALDSS*QGLLSSECTPASNG Trigger: TCCATTGGAAGCTGGTGTGCACTCAGACGAAAGCAGTCCCTGTCAACTACTGTCCAGGGCTGTGATGGGATCAGACCTGGGCGTGAAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR CCA 90 bp | ACACACACACACAAAATCACCTGTGCCTCTGAGAAGTGCCAGGTGTaGCCAAGGTCTACCTCTGGACCAGCAAGTACTGTGACTGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: THTHKITCASEKCQV*PRSTSGPASTVTVS Trigger: GCTTACAGTCACAGTACTTGCTGGTCCAGAGGTAGACCTTGGCCACACCTGGCACTTCTCAGAGGCACAGGTGATTTTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTGGGGAAAGGAAGTGGGTTTCTCCCCAGAGCAGCCAACTCTGGGCAGGTGCCTGCCTCACACCCTTaGGCAGGAGCTGGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QVGKGSGFLPRAANSGQVPASHP*AGAGVQ Trigger: CTGCACCCCAGCTCCTGCCCAAGGGTGTGAGGCAGG...CACCTGCCCAGAGTTGGCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTATCAAGTGGGGAAAGGAAGTGGGTTTCTCCCCAGAGCAGCCAACTCTGGGCCAGGCCCCAGAACCTaGAAGGAGGCTGGCCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PYQVGKGSGFLPRAANSGPGPRT*KEAGPV Trigger: CACAGGGCCAGCCTCCTTCCAGGTTCTGGGGCCTGG...CCCAGAGTTGGCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACTTGATAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGTGGGGAAAGGAAGTGGGTTTCTCCCCAGAGCAGCCAACTCTGGGCAGGTGCAACCGTCACCACAGTaGTGCTGGGGTCCTGAACGG | + |
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Preference number: 2 (lower is better) Translates to: QVGKGSGFLPRAANSGQVQPSPQ*CWGPER Trigger: CCGTTCAGGACCCCAGCATCACTGTGGTGACGGTTG...CACCTGCCCAGAGTTGGCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCCCTGCCTCACACCCTTaGGCAGGAGCTGGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTPASHP*AGAGVQ Trigger: CTGCACCCCAGCTCCTGCCCAAGGGTGTGAGGCAGG...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTATCAAGTGGGGAAAGGAAGTGGGTTTCTCCCCAGAGCAGCCAACTCTGGGCCACACAGTGGAGACTaGCTAGTGCACAGGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PYQVGKGSGFLPRAANSGPHSGD*LVHRVW Trigger: CCAGACCCTGTGCACTAGTCAGTCTCCACTGTGTGG...CCCAGAGTTGGCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACTTGATAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGTGGGGAAAGGAAGTGGGTTTCTCCCCAGAGCAGCCAACTCTGGGCAGGTGGCTGTTCCCACCGCCTaGCTATCGCTCGAAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: QVGKGSGFLPRAANSGQVAVPTA*LSLEKP Trigger: TGGTTTTTCGAGCGATAGGCAGGCGGTGGGAACAGC...CACCTGCCCAGAGTTGGCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCAGAACCACCAGAACACAGAGGTCCAGTTGCAGGCCTaGCTCACACCCTTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QLEKKNPGLHNQNHQNTEVQLQA*LTPLGR Trigger: CCTGCCCAAGGGTGTGAGGCAGGCCTGCAACTGGAC...CTCTGTGTTCTGGTGGTTCTGGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCAGCAAAAGCCCTCCCTaGGCCCTCCCGCAGTATGCA | + |
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Preference number: 2 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTSKSPP*ALPQYA Trigger: TGCATACTGCGGGAGGGCCCAGGGAGGGCTTTTGCT...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCCCACACAGTGGAGACTaGCTAGTGCACAGGGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTPHSGD*LVHRVW Trigger: CCAGACCCTGTGCACTAGTCAGTCTCCACTGTGTGG...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTATCAAGTGGGGAAAGGAAGTGGGTTTCTCCCCAGAGCAGCCAACTCTGGGGCCCTGGACAGTAGTTaGCAGGGACTGCTTTCGTCT | + |
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Preference number: 2 (lower is better) Translates to: PYQVGKGSGFLPRAANSGALDSS*QGLLSS Trigger: AGACGAAAGCAGTCCCTGTCAACTACTGTCCAGGGC...CCCAGAGTTGGCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACTTGATAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTGGCCCTGTGGTCCTGCAACCAGGTATTGCTTGTGATGCTGGCCTGGCAAAGACAGGACTCTTCTaGGGAGGAGGAACAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: EAGPVVLQPGIACDAGLAKTGLF*GGGTRH Trigger: ATGCCTTGTTCCTCCTCCCCAGAAGAGTCCTGTCTT...TGCCAGGCCAGCATCACAAGCAATACCTGGTTGCAGGACCACAGGGCCAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCACCAGGTATTGCTTGTaGTGCTGGCCTGGCAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTTRYCL*CWPGSP Trigger: AGGACTGCCAGGCCAGCATCACAAGCAATACCTGGT...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCCAGGTGTGGCCAAGGTCTACCTCTGGACCAGCAAGTACTGTGACTGTAAGGCTGTTCCCACCGCCTaGCTATCGCTCGAAAAACCA | + |
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Preference number: 2 (lower is better) Translates to: VPGVAKVYLWTSKYCDCKAVPTA*LSLEKP Trigger: TGGTTTTTCGAGCGATAGGCAGGCGGTGGGAACAGC...CTTACAGTCACAGTACTTGCTGGTCCAGAGGTAGACCTTGGCCACACCTGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCAGGAGGGCTGCTGTTCCCACCGCCTGCCTATCGCTCGAAAAACCACTGTGCAGTATGCAACCAGTaGAACGGTCTGGAGATCTGC | + |
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Preference number: 2 (lower is better) Translates to: IPGGLLFPPPAYRSKNHCAVCNQ*NGLEIC Trigger: GCAGATCTCCAGACCGTTCCACTGGTTGCATACTGC...ACAGTGGTTTTTCGAGCGATAGGCAGGCGGTGGGAACAGCAGCCCTCCTGGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCACGCCCAGGTCTGATCCCATCACAGCCCTGGACAGTAGTTGACAGGGACGAACCTCCCACACAGTaGAGACTGACTAGTGCACAG | + |
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Preference number: 2 (lower is better) Translates to: LSRPGLIPSQPWTVVDRDEPPTQ*RLTSAQ Trigger: CTGTGCACTAGTCAGTCTCCACTGTGTGGGAGGTTC...GTCCCTGTCAACTACTGTCCAGGGCTGTGATGGGATCAGACCTGGGCGTGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCAGTGGGGAAAGGAAGTaGGTTTCTCCCCAGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTSGERK*VSPQSS Trigger: GCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACT...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCAGACTAAGGACAACAGAGGGCAAGAGTCCAGTTGCAGGCCTGCCTCACACCAGTGGAACGGTCTaGAGATCTGCAGCTCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: TARLRTTEGKSPVAGLPHTSGTV*RSAALK Trigger: TTTCAGAGCTGCAGATCTCCAGACCGTTCCACTGGT...GTGAGGCAGGCCTGCAACTGGACTCTTGCCCTCTGTTGTCCTTAGTCTGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAGGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCCAGGCCCCAGAACCTaGAAGGAGGCTGGCCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PGRETELSFENENSNHAAPGPRT*KEAGPV Trigger: CACAGGGCCAGCCTCCTTCCAGGTTCTGGGGCCTGG...AGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCCTTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCGTCCAGTTGCAGGCCTaGCTCACACCCTTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QEGKQSFLLRMRTVTMPLVQLQA*LTPLGR Trigger: CCTGCCCAAGGGTGTGAGGCAGGCCTGCAACTGGAC...GAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCCTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR GCA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCATGTGGCCAGGAGCTTaGAAGGTAGAAAAGGCACTC | + |
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Preference number: 2 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTMWPGA*KVEKAL Trigger: GAGTGCCTTTTCTACCTTGCAAGCTCCTGGCCACAT...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR TCA 90 bp | GGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCCTCCCCGCCCTGGACAGTAGTTaGCAGGGACTGCTTTCGTCT | + |
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Preference number: 2 (lower is better) Translates to: GKQSFLLRMRTVTMPLLPALDSS*QGLLSS Trigger: AGACGAAAGCAGTCCCTGTCAACTACTGTCCAGGGC...GGGGAGGAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCCTCCCCTGTGCCTCTGAGAAGTaGCAGGTGTGGCCAAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: GKQSFLLRMRTVTMPLLPCASEK*QVWPRS Trigger: AGACCTTGGCCACACCTGGCACTTCTCAGAGGCACA...GGGGAGGAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCCTCCCCAAGACAGGACTCTTCTaGGGAGGAGGAACAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: GKQSFLLRMRTVTMPLLPKTGLF*GGGTRH Trigger: ATGCCTTGTTCCTCCTCCCCAGAAGAGTCCTGTCTT...GGGGAGGAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCGCAGTATGCAACCAGTaGAACGGTCTGGAGATCTGC | + |
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Preference number: 2 (lower is better) Translates to: QEGKQSFLLRMRTVTMPLAVCNQ*NGLEIC Trigger: GCAGATCTCCAGACCGTTCCACTGGTTGCATACTGC...GAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCCTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAGGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTGAACCTCCCACACAGTaGAGACTGACTAGTGCACAG | + |
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Preference number: 2 (lower is better) Translates to: PGRETELSFENENSNHAAEPPTQ*RLTSAQ Trigger: CTGTGCACTAGTCAGTCTCCACTGTGTGGGAGGTTC...AGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCCTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCAGAACCACCAGAACACAGAGTTAGATCTAGGACTGTaGAAAATCCAAAAGGATTGT | + |
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Preference number: 2 (lower is better) Translates to: QLEKKNPGLHNQNHQNTELDLGL*KIQKDC Trigger: ACAATCCTTTTGGATTTTGCACAGTCCTAGATCTAA...CTCTGTGTTCTGGTGGTTCTGGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTATCCTTCTAGAGTTCAGAGTCCATTACACACACACACACACACACACACAACCAGTGGAACGGTCTaGAGATCTGCAGCTCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LYPSRVQSPLHTHTHTHTTSGTV*RSAALK Trigger: TTTCAGAGCTGCAGATCTCCAGACCGTTCCACTGGT...TGTGTGTGTGTGTGTGTGTGTGTGTAATGGACTCTGAACTCTAGAAGGATACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAAGGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTTTAATGCTGTCACACTaGATAATGACAAGTCACACA | + |
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Preference number: 2 (lower is better) Translates to: PGRETELSFENENSNHAALMLSH*IMTSHT Trigger: TGTGTGACTTGTCATTATGCAGTGTGACAGCATTAA...AGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCCTTCCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR CCA 72 bp | GGCCAGGCCCCAGAACCTGGAAGGAGGCTGGCCCTGTaGTCCTGCAACCAGGTATTGCTTGTGATGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: GQAPEPGRRLAL*SCNQVLLVMLA Trigger: GGCCAGCATCACAAGCAATACCTGGTTGCAGGACCACAGGGCCAGCCTCCTTCCAGGTTCTGGGGCCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGTGGGGAAAGGAAGTGGGTTTCTCCCCAGAGCAGCCAACTCTGGGCAGGTGGCCTGCCTCACACCCTaGGGCAGGAGCTGGGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: QVGKGSGFLPRAANSGQVACLTP*GRSWGA Trigger: TGCACCCCAGCTCCTGCCCAAGGGTGTGAGGCAGGC...CACCTGCCCAGAGTTGGCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR GCA 72 bp | GCCCCAGAACCTGGAAGGAGGCTGGCCCTGTGGTCCTaGAACCAGGTATTGCTTGTGATGCTGGCCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: APEPGRRLALWS*NQVLLVMLAWQ Trigger: CTGCCAGGCCAGCATCACAAGCAATACCTGGTTGCAGGACCACAGGGCCAGCCTCCTTCCAGGTTCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR CCA 72 bp | AAGCCCTCCCTGGGCCCTCCCGCAGTATGCAACCAGTaGAACGGTCTGGAGATCTGCAGCTCTGAAAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: KPSLGPPAVCNQ*NGLEICSSESP Trigger: GGGGCTTTCAGAGCTGCAGATCTCCAGACCGTTCCACTGGTTGCATACTGCGGGAGGGCCCAGGGAGGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CAA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCGCCTGCCTCACACCCTaGGGCAGGAGCTGGGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTACLTP*GRSWGA Trigger: TGCACCCCAGCTCCTGCCCAAGGGTGTGAGGCAGGC...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR GCA 72 bp | AGCCAGACTAAGGACAACAGAGGGCAAGAGTCCAGTTaGAGGCCTGCCTCACACCCTTGGGCAGGAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SQTKDNRGQESS*RPASHPWAGAG Trigger: CCCAGCTCCTGCCCAAGGGTGTGAGGCAGGCCTGCAACTGGACTCTTGCCCTCTGTTGTCCTTAGTCTGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR CCA 72 bp | TGGGCCCTCCCGCAGTATGCAACCAGTGGAACGGTCTaGAGATCTGCAGCTCTGAAAGCCCCTGGCTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: WALPQYATSGTV*RSAALKAPGSV Trigger: GACTGAGCCAGGGGCTTTCAGAGCTGCAGATCTCCAGACCGTTCCACTGGTTGCATACTGCGGGAGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTCACGCCCAGGTCTGATCCCATCACAGCCCTGGACAGTAGTTGACAGGGACAGGGCAAGAGTCCAGTaGCAGGCCTGCCTCACACCC | + |
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Preference number: 3 (lower is better) Translates to: LSRPGLIPSQPWTVVDRDRARVQ*QACLTP Trigger: GGGTGTGAGGCAGGCCTGCAACTGGACTCTTGCCCT...GTCCCTGTCAACTACTGTCCAGGGCTGTGATGGGATCAGACCTGGGCGTGAAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGTGGGGAAAGGAAGTGGGTTTCTCCCCAGAGCAGCCAACTCTGGGCAGGTGGCCTACCCTACCAAGTaGGAAGGGGGAATTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: QVGKGSGFLPRAANSGQVAYPTK*EGGIQA Trigger: TGCCTGAATTCCCCCTTCCAACTTGGTAGGGTAGGC...CACCTGCCCAGAGTTGGCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR TCA 72 bp | GGCTGGCCCTGTGGTCCTGCAACCAGGTATTGCTTGTaGTGCTGGCCTGGCAGTCCTAGGGAATTGGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: GWPCGPATRYCL*CWPGSPRELVS Trigger: TGAGACCAATTCCCTAGGACTGCCAGGCCAGCATCACAAGCAATACCTGGTTGCAGGACCACAGGGCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR GCA 72 bp | TGGTGGTTACTAGGTCCCCAGATGTGGCCAGGAGCTTaGAAGGTAGAAAAGGCACTCAGGGCGGGCTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: WWLLGPQMWPGA*KVEKALRAGSY Trigger: GTAGGAGCCCGCCCTGAGTGCCTTTTCTACCTTGCAAGCTCCTGGCCACATCTGGGGACCTAGTAACCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
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| 3UTR TCA 72 bp | CCCAGGTCTGATCCCATCACAGCCCTGGACAGTAGTTaGCAGGGACTGCTTTCGTCTGAGTGCACACCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRSDPITALDSS*QGLLSSECTPA Trigger: AGCTGGTGTGCACTCAGACGAAAGCAGTCCCTGTCAACTACTGTCCAGGGCTGTGATGGGATCAGACCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR CCA 72 bp | AATCCTCAGCCCTGGTGGTTACTAGGTCCCCAGATGTaGCCAGGAGCTTGCAAGGTAGAAAAGGCACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: NPQPWWLLGPQM*PGACKVEKALR Trigger: CCTGAGTGCCTTTTCTACCTTGCAAGCTCCTGGCCACATCTGGGGACCTAGTAACCACCAGGGCTGAGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR TCA 72 bp | TGGACCAGCAAGTACTGTGACTGTAAGCCAGCCATCTaGTGTCAATGGAGCCAGAGGTCCAGGGGATCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WTSKYCDCKPAI*CQWSQRSRGSP Trigger: AGGAGATCCCCTGGACCTCTGGCTCCATTGACATCAGATGGCTGGCTTACAGTCACAGTACTTGCTGGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCAGGGCAAGAGTCCAGTaGCAGGCCTGCCTCACACCC | + |
|
Preference number: 3 (lower is better) Translates to: QEGKQSFLLRMRTVTMPLRARVQ*QACLTP Trigger: GGGTGTGAGGCAGGCCTGCAACTGGACTCTTGCCCT...GAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCCTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR CCA 72 bp | ACCTCTTCAAAGAAGTTCTCAGACACCCCTATCAAGTaGGGAAAGGAAGTGGGTTTCTCCCCAGAGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSSKKFSDTPIK*GKEVGFSPEQP Trigger: TGGCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACTTGATAGGGGTGTCTGAGAACTTCTTTGAAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCTCCTGCAACCAGGTATaGCTTGTGATGCTGGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QEGKQSFLLRMRTVTMPLSCNQV*LVMLAW Trigger: CCAGGCCAGCATCACAAGCAATACCTGGTTGCAGGA...GAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCCTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCAAACAGAGCTTTCTTTaGAGAATGAGAACAGTAACC | + |
|
Preference number: 3 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTKQSFL*RMRTVT Trigger: GGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTT...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCAGAACCACCAGAACACAGAGAAACAGAGCTTTCTTTaGAGAATGAGAACAGTAACC | + |
|
Preference number: 3 (lower is better) Translates to: QLEKKNPGLHNQNHQNTEKQSFL*RMRTVT Trigger: GGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTT...CTCTGTGTTCTGGTGGTTCTGGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR GCA 72 bp | CAGAACCACCAGAACACAGAGACAAAACCAACACATTaGTCTATAATCAACCTACCTCTTCAAAGAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QNHQNTETKPTH*SIINLPLQRSS Trigger: AGAACTTCTTTGAAGAGGTAGGTTGATTATAGAGCAATGTGTTGGTTTTGTCTCTGTGTTCTGGTGGTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR TCA 90 bp | ATTCCAGGAGGGCTGCTGTTCCCACCGCCTGCCTATCGCTCGAAAAACCACTGTTTCCGGGTGGGCTCTTaGGAAGGGCGGGAACGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IPGGLLFPPPAYRSKNHCFRVGS*EGRERP Trigger: TGGACGTTCCCGCCCTTCTCAAGAGCCCACCCGGAA...ACAGTGGTTTTTCGAGCGATAGGCAGGCGGTGGGAACAGCAGCCCTCCTGGAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR CAA 72 bp | CTGGTGGTTACTAGGTCCCCAGATGTGGCCAGGAGCTaGCAAGGTAGAAAAGGCACTCAGGGCGGGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVVTRSPDVARS*QGRKGTQGGLL Trigger: TAGGAGCCCGCCCTGAGTGCCTTTTCTACCTTGCAAGCTCCTGGCCACATCTGGGGACCTAGTAACCACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCCAGACTAAGGACAACAGAGGGCAAGAGTCCAGTTGCAGGCCTGCCTCACGTGACTGGAGGATCTTaGTTCTTCCGGGTGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TARLRTTEGKSPVAGLPHVTGGS*FFRVGS Trigger: AGAGCCCACCCGGAAGAAGCAAGATCCTCCAGTCAC...GTGAGGCAGGCCTGCAACTGGACTCTTGCCCTCTGTTGTCCTTAGTCTGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCCAGACTAAGGACAACAGAGGGCAAGAGTCCAGTTGCAGGCCTGCCTCACGAACCTGCTCCAGGATaGTTCTGGATGAGACGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TARLRTTEGKSPVAGLPHEPAPG*FWMRRE Trigger: TTCCCGTCTCATCCAGAACCATCCTGGAGCAGGTTC...GTGAGGCAGGCCTGCAACTGGACTCTTGCCCTCTGTTGTCCTTAGTCTGGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCACGCCCAGGTCTGATCCCATCACAGCCCTGGACAGTAGTTGACAGGGACCAAAGTTCATGTTGGTaGAGCCACCCATACCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LSRPGLIPSQPWTVVDRDQSSCW*SHPYPL Trigger: CAATGGGTATGGGTGGCTTCACCAACATGAACTTTG...GTCCCTGTCAACTACTGTCCAGGGCTGTGATGGGATCAGACCTGGGCGTGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR GCA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCTGTCATCAATGTCCATaGCTTCTTCCCCGTTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTCHQCP*LLPRCA Trigger: AGCGCAACGGGGAAGAAGGCATGGACATTGATGACA...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTGGGGAAAGGAAGTGGGTTTCTCCCCAGAGCAGCCAACTCTGGGCAGGTGTATATGGGAAGAACCTaGTCCAGGATGGTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVGKGSGFLPRAANSGQVYMGRT*SRMVLD Trigger: ATCCAGAACCATCCTGGAGCAGGTTCTTCCCATATA...CACCTGCCCAGAGTTGGCTGCTCTGGGGAGAAACCCACTTCCTTTCCCCACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCGGACCACTGTCACATGACAGCCAGACTAAGGACAACAGAGGGCAAGATGTTGTTCGAGGTCTaGTCCCCTTCCTTGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EMADHCHMTARLRTTEGKMLFEV*SPSLGK Trigger: CTTTCCCAAGGAAGGGGACCAGACCTCGAACAACAT...CTTGCCCTCTGTTGTCCTTAGTCTGGCTGTCATGTGACAGTGGTCCGCCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CCA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCGCTCCAGGATGGTTCTaGATGAGACGGGAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTAPGWF*MRRESF Trigger: AAAGGATTCCCGTCTCATCCAGAACCATCCTGGAGC...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CCA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCGCCACCCATACCCATTaGAAAGCTAGAGAATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTATHTH*KARECV Trigger: GACACATTCTCTAGCTTTCCAATGGGTATGGGTGGC...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCAGAACCACCAGAACACAGAGCAAAGTTCATGTTGGTaGAGCCACCCATACCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QLEKKNPGLHNQNHQNTEQSSCW*SHPYPL Trigger: CAATGGGTATGGGTGGCTTCACCAACATGAACTTTG...CTCTGTGTTCTGGTGGTTCTGGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR TCA 90 bp | TTGTATCCTTCTAGAGTTCAGAGTCCATTACACACACACACACACACACACACATTCCGGGTGGGCTCTTaGGAAGGGCGGGAACGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LYPSRVQSPLHTHTHTHTFRVGS*EGRERP Trigger: TGGACGTTCCCGCCCTTCTCAAGAGCCCACCCGGAA...TGTGTGTGTGTGTGTGTGTGTGTGTAATGGACTCTGAACTCTAGAAGGATACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGGTGTGGCCAAGGTCTACCTCTGGACCAGCAAGTACTGTGACTGTAAGTATATGGGAAGAACCTaGTCCAGGATGGTTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VPGVAKVYLWTSKYCDCKYMGRT*SRMVLD Trigger: ATCCAGAACCATCCTGGAGCAGGTTCTTCCCATATA...CTTACAGTCACAGTACTTGCTGGTCCAGAGGTAGACCTTGGCCACACCTGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCCTCCCCATGTTGTTCGAGGTCTaGTCCCCTTCCTTGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GKQSFLLRMRTVTMPLLPMLFEV*SPSLGK Trigger: CTTTCCCAAGGAAGGGGACCAGACCTCGAACAACAT...GGGGAGGAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCCTCCCCGCTCCAGGATGGTTCTaGATGAGACGGGAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKQSFLLRMRTVTMPLLPAPGWF*MRRESF Trigger: AAAGGATTCCCGTCTCATCCAGAACCATCCTGGAGC...GGGGAGGAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR CAA 72 bp | ACCAATGTGTCCCAGGAAGGGAAACAGAGCTTTCTTTaGAGAATGAGAACAGTAACCATGCCGCTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TNVSQEGKQSFL*RMRTVTMPLLP Trigger: GGGGAGGAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCCTTCCTGGGACACATTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCCAGACTAAGGACAACAGAGGGCAAGAGTCCAGTTGCAGGCCTGCCTCACTATCTTCATTTCGAATaGTCTTTCCATCAGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TARLRTTEGKSPVAGLPHYLHFE*SFHQGS Trigger: TGAACCCTGATGGAAAGAGCATTCGAAATGAAGATA...GTGAGGCAGGCCTGCAACTGGACTCTTGCCCTCTGTTGTCCTTAGTCTGGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCAGGTGTGGCCAAGGTCTACCTCTGGACCAGCAAGTACTGTGACTGTAAGTATCTTCATTTCGAATaGTCTTTCCATCAGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPGVAKVYLWTSKYCDCKYLHFE*SFHQGS Trigger: TGAACCCTGATGGAAAGAGCATTCGAAATGAAGATA...CTTACAGTCACAGTACTTGCTGGTCCAGAGGTAGACCTTGGCCACACCTGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CCA 90 bp | GGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCCTCCCCAAAGACGATGTCTGCTaGAATGTTGTTCGAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GKQSFLLRMRTVTMPLLPKDDVC*NVVRGL Trigger: CAGACCTCGAACAACATTCCAGCAGACATCGTCTTT...GGGGAGGAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CCA 90 bp | TATCCTTCTAGAGTTCAGAGTCCATTACACACACACACACACACACACACACACGAACCTGCTCCAGGATaGTTCTGGATGAGACGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YPSRVQSPLHTHTHTHTHEPAPG*FWMRRE Trigger: TTCCCGTCTCATCCAGAACCATCCTGGAGCAGGTTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTAATGGACTCTGAACTCTAGAAGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR GCA 90 bp | TATCCTTCTAGAGTTCAGAGTCCATTACACACACACACACACACACACACACACTGTCATCAATGTCCATaGCTTCTTCCCCGTTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YPSRVQSPLHTHTHTHTHCHQCP*LLPRCA Trigger: AGCGCAACGGGGAAGAAGGCATGGACATTGATGACA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTAATGGACTCTGAACTCTAGAAGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCCTCGCCACCCATACCCATTaGAAAGCTAGAGAATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGKQSFLLRMRTVTMPLLATHTH*KARECV Trigger: GACACATTCTCTAGCTTTCCAATGGGTATGGGTGGC...GAGGAGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| 3UTR CAA 72 bp | CCAGAACCACCAGAACACAGAGACAAAACCAACACATaGCTCTATAATCAACCTACCTCTTCAAAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PEPPEHRDKTNT*LYNQPTSSKKF Trigger: GAACTTCTTTGAAGAGGTAGGTTGATTATAGAGCAATGTGTTGGTTTTGTCTCTGTGTTCTGGTGGTTCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CAA 90 bp | ACAGCCAGACTAAGGACAACAGAGGGCAAGAGTCCAGTTGCAGGCCTGCCTCACCTTCCGGGTGGGCTCTaGAGAAGGGCGGGAACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TARLRTTEGKSPVAGLPHLPGGL*RRAGTS Trigger: GGACGTTCCCGCCCTTCTCAAGAGCCCACCCGGAAG...GTGAGGCAGGCCTGCAACTGGACTCTTGCCCTCTGTTGTCCTTAGTCTGGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCACGCCCAGGTCTGATCCCATCACAGCCCTGGACAGTAGTTGACAGGGACGGTGACTGGAGGATCTaGCTTCTTCCGGGTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRPGLIPSQPWTVVDRDGDWRI*LLPGGL Trigger: GAGCCCACCCGGAAGAAGCAAGATCCTCCAGTCACC...GTCCCTGTCAACTACTGTCCAGGGCTGTGATGGGATCAGACCTGGGCGTGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCAGGTGTGGCCAAGGTCTACCTCTGGACCAGCAAGTACTGTGACTGTAAGGGTGACTGGAGGATCTaGCTTCTTCCGGGTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPGVAKVYLWTSKYCDCKGDWRI*LLPGGL Trigger: GAGCCCACCCGGAAGAAGCAAGATCCTCCAGTCACC...CTTACAGTCACAGTACTTGCTGGTCCAGAGGTAGACCTTGGCCACACCTGGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCACGCCCAGGTCTGATCCCATCACAGCCCTGGACAGTAGTTGACAGGGACGTCTGGTCCCCTTCCTaGGGAAAGGTGATTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRPGLIPSQPWTVVDRDVWSPS*GKVILV Trigger: GACCAAAATCACCTTTCCCAAGGAAGGGGACCAGAC...GTCCCTGTCAACTACTGTCCAGGGCTGTGATGGGATCAGACCTGGGCGTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGGCCCTGTGGTCCTGCAACCAGGTATTGCTTGTGATGCTGGCCTGGCAGGCCTGATGACATCTTaGAATACAACAGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EAGPVVLQPGIACDAGLAGLMTS*NTTGMV Trigger: GACCATCCCTGTTGTATTCAAAGATGTCATCAGGCC...TGCCAGGCCAGCATCACAAGCAATACCTGGTTGCAGGACCACAGGGCCAGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAGGGAAACAGAGCTTTCTTTTGAGAATGAGAACAGTAACCATGCCGCTCTTCCGGGTGGGCTCTaGAGAAGGGCGGGAACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRETELSFENENSNHAALPGGL*RRAGTS Trigger: GGACGTTCCCGCCCTTCTCAAGAGCCCACCCGGAAG...AGCGGCATGGTTACTGTTCTCATTCTCAAAAGAAAGCTCTGTTTCCCTTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CAA 90 bp | GCATGGCTGGTAGCTGTAGTCAGCTGGAGAAGAAAAACCCTGGGCTCCACAACCGTCTGGTCCCCTTCCTaGGGAAAGGTGATTTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AWLVAVVSWRRKTLGSTTVWSPS*GKVILV Trigger: GACCAAAATCACCTTTCCCAAGGAAGGGGACCAGAC...GGTTGTGGAGCCCAGGGTTTTTCTTCTCCAGCTGACTACAGCTACCAGCCATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||
| CDS-3UTR CAA 90 bp | TATCCTTCTAGAGTTCAGAGTCCATTACACACACACACACACACACACACACACTCGAAAATCTCGCGCTaGCGCGGGTCGCTGAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: YPSRVQSPLHTHTHTHTHSKISR*RGSLST Trigger: CGTGCTCAGCGACCCGCGCAAGCGCGAGATTTTCGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTAATGGACTCTGAACTCTAGAAGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005620.10 |
||
| CDS-3UTR CAA 90 bp | TTGTATCCTTCTAGAGTTCAGAGTCCATTACACACACACACACACACACACACAGGCCTGATGACATCTTaGAATACAACAGGGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LYPSRVQSPLHTHTHTHTGLMTS*NTTGMV Trigger: GACCATCCCTGTTGTATTCAAAGATGTCATCAGGCC...TGTGTGTGTGTGTGTGTGTGTGTGTAATGGACTCTGAACTCTAGAAGGATACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005620.10 ENSMUST00000212300.2 |
||