Pregenerated sensors for DNAJA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032285Ensembl transcript IDs: ENSMUST00000070070.8, ENSMUST00000120452.8, ENSMUST00000154690.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAGCAGTGTTCTTCAGGAGCCTGGTCCTGCTAGCTGGCTTACTTaGCCAGCCACAGGTCTCATCTGCCCTTTGACCGCCCCCAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: ASSVLQEPGPASWLT*PATGLICPLTAPRR Trigger: TCTCCTGGGGGCGGTCAAAGGGCAGATGAGACCTGTGGCTGGTCAAGTAAGCCAGCTAGCAGGACCAGGCTCCTGAAGAACACTGCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CCA 90 bp | CCCTTTGACCGCCCCCAGGAGAGGTTCCTGGTCTGTGTCAAAGTCTaGTACCATAAAAACCAAGTAAGGATGGATCTGACAGGTTATCCC | + |
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Preference number: 1 (lower is better) Translates to: PFDRPQERFLVCVKV*YHKNQVRMDLTGYP Trigger: GGGATAACCTGTCAGATCCATCCTTACTTGGTTTTTATGGTACCAGACTTTGACACAGACCAGGAACCTCTCCTGGGGGCGGTCAAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR TCA 90 bp | AAGAGAAACAAGAAAACCCAAGAGATACTCAGCAGTGGAGACTGCTaGACACATACACGGGACACCCCAAACGTGAGGCTATTAAAGCGA | + |
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Preference number: 1 (lower is better) Translates to: KRNKKTQEILSSGDC*THTRDTPNVRLLKR Trigger: TCGCTTTAATAGCCTCACGTTTGGGGTGTCCCGTGTATGTGTTCAGCAGTCTCCACTGCTGAGTATCTCTTGGGTTTTCTTGTTTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR GCA 90 bp | GGACACCCCAAACGTGAGGCTATTAAAGCGATGCCATTTTCATTGTaGCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: GHPKREAIKAMPFSL*QVYIHHVLESNQAR Trigger: CCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGGGTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CCA 90 bp | TCTGCAGCTTTTGAGTCCAGCCTACTCTGTATGAACCAGGCATGCTaGGCCTACTGCAAGCCATATGTGGACTTTTACTATCTTAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: SAAFESSLLCMNQAC*AYCKPYVDFYYLKS Trigger: ACTCTTAAGATAGTAAAAGTCCACATATGGCTTGCAGTAGGCCCAGCATGCCTGGTTCATACAGAGTAGGCTGGACTCAAAAGCTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR TCA 90 bp | AAGAAAGCACTTTGGTGGGACAACACTGCAAAGGTCGTCAATAGATaGTCATTAAGAGCACAAAGAACAAGGTATGGGGTTACAGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: KKALWWDNTAKVVNR*SLRAQRTRYGVTGK Trigger: TTTGCCTGTAACCCCATACCTTGTTCTTTGTGCTCTTAATGATCATCTATTGACGACCTTTGCAGTGTTGTCCCACCAAAGTGCTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR GCA 90 bp | GTCACAGCACAGAAACACCACCCTGGAGTTGTGGTCCACTTATTAATTGGAGGACCCTTTGGTTGTTTCTaGAGCTGGTCAGGGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VTAQKHHPGVVVHLLIGGPFGCF*SWSGLP Trigger: TGGCAGCCCTGACCAGCTGCAGAAACAACCAAAGGG...TCCTCCAATTAATAAGTGGACCACAACTCCAGGGTGGTGTTTCTGTGCTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR TCA 90 bp | AACCTGGTTGGGCCAGTTCTCACCACACATCACAAGCAGAAAGCCCTTTGCAGTTGTCTCTGCAGCTTTTaGGTCCAGCCTACTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: NLVGPVLTTHHKQKALCSCLCSF*VQPTLY Trigger: ATACAGAGTAGGCTGGACTCAAAAGCTGCAGAGACA...ACTGCAAAGGGCTTTCTGCTTGTGATGTGTGGTGAGAACTGGCCCAACCAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR GCA 90 bp | AACCTGGTTGGGCCAGTTCTCACCACACATCACAAGCAGAAAGCCCTTTGCAGTATACTGAGGGGTCTGTaGCATTGCACACCCTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: NLVGPVLTTHHKQKALCSILRGL*HCTPLR Trigger: TCTTAAGGGTGTGCAATGGCACAGACCCCTCAGTAT...ACTGCAAAGGGCTTTCTGCTTGTGATGTGTGGTGAGAACTGGCCCAACCAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR CCA 90 bp | AACCTGGTTGGGCCAGTTCTCACCACACATCACAAGCAGAAAGCCCTTTGCAGTGGAAAGAAAGCACTTTaGTGGGACAACACTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: NLVGPVLTTHHKQKALCSGKKAL*WDNTAK Trigger: CTTTGCAGTGTTGTCCCACCAAAGTGCTTTCTTTCC...ACTGCAAAGGGCTTTCTGCTTGTGATGTGTGGTGAGAACTGGCCCAACCAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CAA 90 bp | ACGGGACACCCCAAACGTGAGGCTATTAAAGCGATGCCATTTTCATaGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: TGHPKREAIKAMPFS*CQVYIHHVLESNQA Trigger: GGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGGGTGTCCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACGTATGTTTTACTAGCCAGCAGTGTTCTTCAGGAGCCTGGTCCTGCTAGCGTTACGGCTAGAGGCTaGGGTAGCCTTTATTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: KTYVLLASSVLQEPGPASVTARG*GSLYLK Trigger: CTTTAAATAAAGGCTACCTCAGCCTCTAGCCGTAAC...GCTAGCAGGACCAGGCTCCTGAAGAACACTGCTGGCTAGTAAAACATACGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCACAAAGAACAAGGTATGGGGTTACAGGCAAATGGCTTTATTGGCTTATTGCATGCTGGGCCTACTaGAAGCCATATGTGGACTTT | + |
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Preference number: 2 (lower is better) Translates to: RAQRTRYGVTGKWLYWLIACWAY*KPYVDF Trigger: AAAGTCCACATATGGCTTGCAGTAGGCCCAGCATGC...AATAAGCCAATAAAGCCATTTGCCTGTAACCCCATACCTTGTTCTTTGTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGTAACTAGAACACATTCCCAAGCAGCTGTCATTGCCAGCCAACTAGAACCTACAAAGAACAAGGTATaGGGTTACAGGCAAATGGCT | + |
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Preference number: 2 (lower is better) Translates to: VVTRTHSQAAVIASQLEPTKNKV*GYRQMA Trigger: AGCCATTTGCCTGTAACCCCATACCTTGTTCTTTGT...AGGTTCTAGTTGGCTGGCAATGACAGCTGCTTGGGAATGTGTTCTAGTTACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTTGTGGTCCACTTATTAATTGGAGGAAGCAGTTTTAAGTCTGTCATGGCCAAGCCCTTTGCAGTATaGCTGTACAGTGAGAATGAC | + |
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Preference number: 2 (lower is better) Translates to: GVVVHLLIGGSSFKSVMAKPFAV*LYSEND Trigger: GTCATTCTCACTGTACAGCCATACTGCAAAGGGCTT...GGCCATGACAGACTTAAAACTGCTTCCTCCAATTAATAAGTGGACCACAACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR TCA 90 bp | GTCACAGCACAGAAACACCACCCTGGAGTTGTGGTCCACTTATTAATTGGAGGAAAGGTCGTCAATAGATaGTCATTAAGAGCACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VTAQKHHPGVVVHLLIGGKVVNR*SLRAQR Trigger: TCTTTGTGCTCTTAATGATCATCTATTGACGACCTT...TCCTCCAATTAATAAGTGGACCACAACTCCAGGGTGGTGTTTCTGTGCTGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR CCA 90 bp | CACCACACATCACAAGCAGAAAGCCCTTTGCAGTATGGCTGTACAGTGAGAATGTTGGCTTATTTAAAATaGGCTTGTCATCACAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: HHTSQAESPLQYGCTVRMLAYLK*ACHHKA Trigger: AGCCTTGTGATGACAAGCCCATTTTAAATAAGCCAA...CATTCTCACTGTACAGCCATACTGCAAAGGGCTTTCTGCTTGTGATGTGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGTTGTGGTCCACTTATTAATTGGAGGAAGCAGTTTTAAGTCTGTCATGGCCGAAACAGATTCCATATaGAGACTAGAGGGGATTGAA | + |
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Preference number: 2 (lower is better) Translates to: GVVVHLLIGGSSFKSVMAETDSI*RLEGIE Trigger: TTCAATCCCCTCTAGTCTGCATATGGAATCTGTTTC...GGCCATGACAGACTTAAAACTGCTTCCTCCAATTAATAAGTGGACCACAACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CCA 72 bp | ACACCCACCTTCTGGGCCTTTGTTAGGGGCCAAGAGTaGTCCTCTGGGCCTACTGTGGGAACGAACCATGGC | + |
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Preference number: 3 (lower is better) Translates to: TPTFWAFVRGQE*SSGPTVGTNHG Trigger: GCCATGGTTCGTTCCCACAGTAGGCCCAGAGGACCACTCTTGGCCCCTAACAAAGGCCCAGAAGGTGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR TCA 72 bp | GTTCTTCAGGAGCCTGGTCCTGCTAGCTGGCTTACTTaGCCAGCCACAGGTCTCATCTGCCCTTTGACCGCC | + |
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Preference number: 3 (lower is better) Translates to: VLQEPGPASWLT*PATGLICPLTA Trigger: GGCGGTCAAAGGGCAGATGAGACCTGTGGCTGGTCAAGTAAGCCAGCTAGCAGGACCAGGCTCCTGAAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CCA 72 bp | AACCACAGACTAGAGATGGGCCAGACACCCACCTTCTaGGCCTTTGTTAGGGGCCAAGAGTGGTCCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: NHRLEMGQTPTF*AFVRGQEWSSG Trigger: CCCAGAGGACCACTCTTGGCCCCTAACAAAGGCCCAGAAGGTGGGTGTCTGGCCCATCTCTAGTCTGTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAGCCACAGGTCTCATCTGCCCTTTGACCGCCCCCAGGAGAGGTTCCTGGTCTTGTCATCACAAGGCTaGGGAAGTTCAGAAAACTTC | + |
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Preference number: 3 (lower is better) Translates to: TSHRSHLPFDRPQERFLVLSSQG*GSSENF Trigger: GAAGTTTTCTGAACTTCCCAAGCCTTGTGATGACAA...GACCAGGAACCTCTCCTGGGGGCGGTCAAAGGGCAGATGAGACCTGTGGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CCA 72 bp | AAGCCACCAGCACTCCCCTTTGGTTGTTTCTGCAGCTaGTCAGGGCTGCCAGGGATACATATGAAGGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: KPPALPFGCFCS*SGLPGIHMKGL Trigger: TAAGCCCTTCATATGTATCCCTGGCAGCCCTGACCAGCTGCAGAAACAACCAAAGGGGAGTGCTGGTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CCA 72 bp | CAAGCAGCTGTCATTGCCAGCCAACTAGAACCTGGTTaGGCCAGTTCTCACCACACATCACAAGCAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: QAAVIASQLEPG*ASSHHTSQAES Trigger: GCTTTCTGCTTGTGATGTGTGGTGAGAACTGGCCCAACCAGGTTCTAGTTGGCTGGCAATGACAGCTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CCA 72 bp | TTCCCAAGCAGCTGTCATTGCCAGCCAACTAGAACCTaGTTGGGCCAGTTCTCACCACACATCACAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: FPSSCHCQPTRT*LGQFSPHITSR Trigger: TCTGCTTGTGATGTGTGGTGAGAACTGGCCCAACCAGGTTCTAGTTGGCTGGCAATGACAGCTGCTTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CCA 72 bp | CTCATCTGCCCTTTGACCGCCCCCAGGAGAGGTTCCTaGTCTGTGTCAAAGTCTGGTACCATAAAAACCAAG | + |
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Preference number: 3 (lower is better) Translates to: LICPLTAPRRGS*SVSKSGTIKTK Trigger: CTTGGTTTTTATGGTACCAGACTTTGACACAGACCAGGAACCTCTCCTGGGGGCGGTCAAAGGGCAGATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR-3UTR CAA 90 bp | GTCACAGCACAGAAACACCACCCTGGAGTTGTGGTCCACTTATTAATTGGAGGAAGCACTCCCCTTTGGTaGTTTCTGCAGCTGGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: VTAQKHHPGVVVHLLIGGSTPLW*FLQLVR Trigger: CCTGACCAGCTGCAGAAACAACCAAAGGGGAGTGCT...TCCTCCAATTAATAAGTGGACCACAACTCCAGGGTGGTGTTTCTGTGCTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CCA 72 bp | TCACCACACATCACAAGCAGAAAGCCCTTTGCAGTATaGCTGTACAGTGAGAATGACGGGCCTTTAGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: SPHITSRKPFAV*LYSENDGPLGR Trigger: CCTTCCTAAAGGCCCGTCATTCTCACTGTACAGCCATACTGCAAAGGGCTTTCTGCTTGTGATGTGTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CCA 72 bp | CGCCCCCAGGAGAGGTTCCTGGTCTGTGTCAAAGTCTaGTACCATAAAAACCAAGTAAGGATGGATCTGACA | + |
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Preference number: 3 (lower is better) Translates to: RPQERFLVCVKV*YHKNQVRMDLT Trigger: TGTCAGATCCATCCTTACTTGGTTTTTATGGTACCAGACTTTGACACAGACCAGGAACCTCTCCTGGGGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR TCA 72 bp | AAAGAACATTATGCCCTAGACTGTCTCTGCAGCTTTTaGGTCCAGCCTACTCTGTATGAACCAGGCATGCTG | + |
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Preference number: 3 (lower is better) Translates to: KEHYALDCLCSF*VQPTLYEPGML Trigger: CAGCATGCCTGGTTCATACAGAGTAGGCTGGACTCAAAAGCTGCAGAGACAGTCTAGGGCATAATGTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR GCA 72 bp | ACACGGGACACCCCAAACGTGAGGCTATTAAAGCGATaGCATTTTCATTGTGCCAAGTTTACATTCATCATG | + |
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Preference number: 3 (lower is better) Translates to: TRDTPNVRLLKR*HFHCAKFTFIM Trigger: CATGATGAATGTAAACTTGGCACAATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGGGTGTCCCGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR TCA 72 bp | CTTTGGTGGGACAACACTGCAAAGGTCGTCAATAGATaGTCATTAAGAGCACAAAGAACAAGGTATGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: LWWDNTAKVVNR*SLRAQRTRYGV Trigger: AACCCCATACCTTGTTCTTTGTGCTCTTAATGATCATCTATTGACGACCTTTGCAGTGTTGTCCCACCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| CDS-3UTR TCA 90 bp | ACCAGCCACAGGTCTCATCTGCCCTTTGACCGCCCCCAGGAGAGGTTCCTGGTCAGCGGTCCTTGGGGTTaGTGCGCTCGCCCTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: TSHRSHLPFDRPQERFLVSGPWG*CARPGP Trigger: AGGGCCAGGGCGAGCGCATCAACCCCAAGGACCGCT...GACCAGGAACCTCTCCTGGGGGCGGTCAAAGGGCAGATGAGACCTGTGGCTGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CAA 72 bp | CTGGTGTGCTGGGAACTAAGCCACCAGCACTCCCCTTaGGTTGTTTCTGCAGCTGGTCAGGGCTGCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LVCWELSHQHSP*VVSAAGQGCQG Trigger: TCCCTGGCAGCCCTGACCAGCTGCAGAAACAACCAAAGGGGAGTGCTGGTGGCTTAGTTCCCAGCACACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| CDS-3UTR GCA 90 bp | GTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGCATGCCGTCTGGCACTaGACGCCAGCGCGGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VPSLHSSCTRVQPGQATPHAVWH*TPARGS Trigger: AGAGCCCCGCGCTGGCGTGCAGTGCCAGACGGCATG...CGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR CCA 90 bp | CCACCTTCTGGGCCTTTGTTAGGGGCCAAGAGTGGTCCTCTGGGCCTACTGTGGTCGATGCACACAGTCTaGATCTGCTGCACCATGCCC | + |
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Preference number: 4 (lower is better) Translates to: PPSGPLLGAKSGPLGLLWSMHTV*ICCTMP Trigger: GGGCATGGTGCAGCAGATCCAGACTGTGTGCATCGA...CCACAGTAGGCCCAGAGGACCACTCTTGGCCCCTAACAAAGGCCCAGAAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| CDS-3UTR TCA 90 bp | CCAAGAGATACTCAGCAGTGGAGACTGCTGAACACATACACGGGACACCCCAAATGTCCGGGTGGTACTTaGGCGCCAGCTTCCGATAGG | + |
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Preference number: 4 (lower is better) Translates to: PRDTQQWRLLNTYTGHPKCPGGT*APASDR Trigger: CCTATCGGAAGCTGGCGCTCAAGTACCACCCGGACA...TTTGGGGTGTCCCGTGTATGTGTTCAGCAGTCTCCACTGCTGAGTATCTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| CDS-3UTR GCA 90 bp | GTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGCACACAGTCTGGATCTaGTGCACCATGCCCGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VPSLHSSCTRVQPGQATPHTVWI*CTMPGP Trigger: TGGGCCGGGCATGGTGCAGCAGATCCAGACTGTGTG...CGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR GCA 90 bp | CCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGCACGCTCGCCCTGGCCCTTaGACTCGATGCACACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: PSLHSSCTRVQPGQATPHARPGP*TRCTQS Trigger: AGACTGTGTGCATCGAGTGCAAGGGCCAGGGCGAGC...GTGCGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR GCA 90 bp | ATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACATGCCGTCTGGCACTaGACGCCAGCGCGGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: IVPSLHSSCTRVQPGQATHAVWH*TPARGS Trigger: AGAGCCCCGCGCTGGCGTGCAGTGCCAGACGGCATG...TGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR CCA 90 bp | AGTCAAGGGGAAAGAACATTATGCCCTAGACTGTCTCTGCAGCTTTTGAGTCCACCTCCGGGGACGCGCTaGGCTTCACCCCCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: SQGERTLCPRLSLQLLSPPPGTR*ASPPGC Trigger: ACATCCTGGGGGTGAAGCCCAGCGCGTCCCCGGAGG...TGGACTCAAAAGCTGCAGAGACAGTCTAGGGCATAATGTTCTTTCCCCTTGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| CDS-3UTR CCA 90 bp | ATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCTCCGGGGACGCGCTaGGCTTCACCCCCAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: IVPSLHSSCTRVQPGQATPPGTR*ASPPGC Trigger: ACATCCTGGGGGTGAAGCCCAGCGCGTCCCCGGAGG...TGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR CCA 90 bp | TGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGCTGGGTGAAGAGAAGCTaGGGCTGCCCGATCCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: CQVYIHHVLESNQARPHRWVKRS*GCPIPL Trigger: AAGGGGGATCGGGCAGCCCCAGCTTCTCTTCACCCA...GCGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR GCA 90 bp | GTCACAGCACAGAAACACCACCCTGGAGTTGTGGTCCACTTATTAATTGGAGGATGCTGGATGTGGACCTaGATCCCCCGCCCCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: VTAQKHHPGVVVHLLIGGCWMWT*IPRPLH Trigger: GTGCAAGGGGCGGGGGATGCAGGTCCACATCCAGCA...TCCTCCAATTAATAAGTGGACCACAACTCCAGGGTGGTGTTTCTGTGCTGTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| CDS-3UTR GCA 90 bp | GTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGATGCCCGGCCCAATCTaGTGGATGTGGACCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: VPSLHSSCTRVQPGQATPMPGPI*WMWTCI Trigger: GATGCAGGTCCACATCCAGCAGATTGGGCCGGGCAT...CGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR TCA 90 bp | GCCATTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCAGCGGTCCTTGGGGTTaGTGCGCTCGCCCTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: AIFIVPSLHSSCTRVQPGSGPWG*CARPGP Trigger: AGGGCCAGGGCGAGCGCATCAACCCCAAGGACCGCT...GCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR GCA 90 bp | ATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACATGCTGGATGTGGACCTaGATCCCCCGCCCCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IVPSLHSSCTRVQPGQATCWMWT*IPRPLH Trigger: GTGCAAGGGGCGGGGGATGCAGGTCCACATCCAGCA...TGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACTTGATGCGCTCGCCCTaGCCCTTGCACTCGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCQVYIHHVLESNQARPHLMRSP*PLHSMH Trigger: GTGCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAA...GTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| 3UTR CAA 72 bp | CCAAGCAGCTGTCATTGCCAGCCAACTAGAACCTGGTaGGGCCAGTTCTCACCACACATCACAAGCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSSCHCQPTRTW*GQFSPHITSRK Trigger: CTTTCTGCTTGTGATGTGTGGTGAGAACTGGCCCAACCAGGTTCTAGTTGGCTGGCAATGACAGCTGCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR TCA 90 bp | ATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACATGTCCGGGTGGTACTTaGGCGCCAGCTTCCGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: IVPSLHSSCTRVQPGQATCPGGT*APASDR Trigger: CCTATCGGAAGCTGGCGCTCAAGTACCACCCGGACA...TGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACACACAGTCTGGATCTaGTGCACCATGCCCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IVPSLHSSCTRVQPGQATHTVWI*CTMPGP Trigger: TGGGCCGGGCATGGTGCAGCAGATCCAGACTGTGTG...TGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGTGGTCCACTTATTAATTGGAGGAAGCAGTTTTAAGTCTGTCATGGCCCCAATCTGCTGGATGTaGACCTGCATCCCCCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVVVHLLIGGSSFKSVMAPICWM*TCIPRP Trigger: GGGGCGGGGGATGCAGGTCCACATCCAGCAGATTGG...GGCCATGACAGACTTAAAACTGCTTCCTCCAATTAATAAGTGGACCACAACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR CCA 90 bp | GTAGTAACTAGAACACATTCCCAAGCAGCTGTCATTGCCAGCCAACTAGAACCTTTGATGCGCTCGCCCTaGCCCTTGCACTCGATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVTRTHSQAAVIASQLEPLMRSP*PLHSMH Trigger: GTGCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAA...AGGTTCTAGTTGGCTGGCAATGACAGCTGCTTGGGAATGTGTTCTAGTTACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGTCTGCTCGTTGGGATTaGACTCCTTCAACTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSLHSSCTRVQPGQATPSARWD*TPSTPP Trigger: AGGTGGAGTTGAAGGAGTTCAATCCCAACGAGCAGA...CGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR GCA 90 bp | TTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACAGTCTGGATCTGCTaGACCATGCCCGGCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: FIVPSLHSSCTRVQPGQATVWIC*TMPGPI Trigger: GATTGGGCCGGGCATGGTGCAGCAGATCCAGACTGT...GGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR GCA 90 bp | GTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGCACTTCAGGTCCCCATaGTTTATCACCTCACCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VPSLHSSCTRVQPGQATPHFRSP*FITSPD Trigger: GTCAGGTGAGGTGATAAAGCATGGGGACCTGAAGTG...CGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCCGGCCCAATCTGCTaGATGTGGACCTGCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLCQVYIHHVLESNQARPGPIC*MWTCIP Trigger: GGGGATGCAGGTCCACATCCAGCAGATTGGGCCGGG...CCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| 3UTR CAA 72 bp | GCCAGTTCTCACCACACATCACAAGCAGAAAGCCCTTaGCAGTATGGCTGTACAGTGAGAATGACGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASSHHTSQAESP*QYGCTVRMTGL Trigger: AAGGCCCGTCATTCTCACTGTACAGCCATACTGCAAAGGGCTTTCTGCTTGTGATGTGTGGTGAGAACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGGTCTTCCAGAGTTACTaGCAGCTGGTGGACAACATT | + |
|
Preference number: 4 (lower is better) Translates to: VPSLHSSCTRVQPGQATPVFQSY*QLVDNI Trigger: AATGTTGTCCACCAGCTGTCAGTAACTCTGGAAGAC...CGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR GCA 90 bp | AGTCAAGGGGAAAGAACATTATGCCCTAGACTGTCTCTGCAGCTTTTGAGTCCAGGCCCTTGCACTCGATaGACACAGTCTGGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQGERTLCPRLSLQLLSPGPCTR*TQSGSA Trigger: AGCAGATCCAGACTGTGTGCATCGAGTGCAAGGGCC...TGGACTCAAAAGCTGCAGAGACAGTCTAGGGCATAATGTTCTTTCCCCTTGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCACAAAAGGTCAGTGTGGTACTGGCATCTCCAAAATAAGTCCTGAAAGTGCTCGCCCTGGCCCTTaGACTCGATGCACACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSTKGQCGTGISKISPESARPGP*TRCTQS Trigger: AGACTGTGTGCATCGAGTGCAAGGGCCAGGGCGAGC...ACTTTCAGGACTTATTTTGGAGATGCCAGTACCACACTGACCTTTTGTGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGGTGATCCTCACCTTCTaGCGAGGGGGAAGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLCQVYIHHVLESNQARVILTF*RGGSRA Trigger: GGCTCTGCTTCCCCCTCGGCAGAAGGTGAGGATCAC...CCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGCCAATCTGCTGGATGTaGACCTGCATCCCCCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IFIVPSLHSSCTRVQPGQPICWM*TCIPRP Trigger: GGGGCGGGGGATGCAGGTCCACATCCAGCAGATTGG...CTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGCCCGGCCCAATCTGCTaGATGTGGACCTGCATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IFIVPSLHSSCTRVQPGQPGPIC*MWTCIP Trigger: GGGGATGCAGGTCCACATCCAGCAGATTGGGCCGGG...CTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR CCA 90 bp | TCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCATCGATGCACACAGTCTaGATCTGCTGCACCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCQVYIHHVLESNQARPSMHTV*ICCTMP Trigger: GGGCATGGTGCAGCAGATCCAGACTGTGTGCATCGA...TGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR TCA 90 bp | TCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCAAAAGATATCCATGGGTaGAGAGAAGCTGGGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCQVYIHHVLESNQARPKDIHG*REAGAA Trigger: GGCAGCCCCAGCTTCTCTTCACCCATGGATATCTTT...TGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR TCA 90 bp | TCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCAGATCCATGTCATCTGTaGTCCTCACCTTCTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCQVYIHHVLESNQARPDPCHL*SSPSAE Trigger: CTCGGCAGAAGGTGAGGATCACAGATGACATGGATC...TGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR TCA 90 bp | AAAACGTATGTTTTACTAGCCAGCAGTGTTCTTCAGGAGCCTGGTCCTGCTAGCTCTGCTCGTTGGGATTaGACTCCTTCAACTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KTYVLLASSVLQEPGPASSARWD*TPSTPP Trigger: AGGTGGAGTTGAAGGAGTTCAATCCCAACGAGCAGA...GCTAGCAGGACCAGGCTCCTGAAGAACACTGCTGGCTAGTAAAACATACGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGTGGGTGAAGAGAAGCTaGGGCTGCCCGATCCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFIVPSLHSSCTRVQPGQWVKRS*GCPIPL Trigger: AAGGGGGATCGGGCAGCCCCAGCTTCTCTTCACCCA...CTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR TCA 90 bp | GTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGCTACTAAAAACTGTATaGTCATCACCCCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPSLHSSCTRVQPGQATPLLKTV*SSPPSP Trigger: TGGAGAAGGGGGTGATGATCATACAGTTTTTAGTAG...CGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR TCA 90 bp | AAAACGTATGTTTTACTAGCCAGCAGTGTTCTTCAGGAGCCTGGTCCTGCTAGCTCCTTCAACTCCACCTaGTCCATGTCATCTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: KTYVLLASSVLQEPGPASSFNST*SMSSVI Trigger: GATCACAGATGACATGGATCAGGTGGAGTTGAAGGA...GCTAGCAGGACCAGGCTCCTGAAGAACACTGCTGGCTAGTAAAACATACGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR GCA 90 bp | GCCATTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCGGCCCTTGCACTCGATaGACACAGTCTGGATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AIFIVPSLHSSCTRVQPGGPCTR*TQSGSA Trigger: AGCAGATCCAGACTGTGTGCATCGAGTGCAAGGGCC...GCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACACTTCAGGTCCCCATaGTTTATCACCTCACCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IVPSLHSSCTRVQPGQATHFRSP*FITSPD Trigger: GTCAGGTGAGGTGATAAAGCATGGGGACCTGAAGTG...TGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR TCA 90 bp | TTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCTCCTTCAACTCCACCTaGTCCATGTCATCTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FIVPSLHSSCTRVQPGQASFNST*SMSSVI Trigger: GATCACAGATGACATGGATCAGGTGGAGTTGAAGGA...GGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACATCCCCCTTCTTTAATTaGCTGTTCTCCACCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IVPSLHSSCTRVQPGQATSPFFN*LFSTLV Trigger: GACCAAGGTGGAGAACAGGCAATTAAAGAAGGGGGA...TGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR GCA 90 bp | ATGCCATTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGACAGTCTGGATCTGCTaGACCATGCCCGGCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: MPFSLCQVYIHHVLESNQTVWIC*TMPGPI Trigger: GATTGGGCCGGGCATGGTGCAGCAGATCCAGACTGT...CTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAATGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR CCA 90 bp | CACCACACATCACAAGCAGAAAGCCCTTTGCAGTATGGCTGTACAGTGAGAATGAGAGTTACTGACAGCTaGTGGACAACATTCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HHTSQAESPLQYGCTVRMRVTDS*WTTFLP Trigger: AGGCAAGAATGTTGTCCACCAGCTGTCAGTAACTCT...CATTCTCACTGTACAGCCATACTGCAAAGGGCTTTCTGCTTGTGATGTGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGATCCATGTCATCTGTaGTCCTCACCTTCTGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IFIVPSLHSSCTRVQPGQDPCHL*SSPSAE Trigger: CTCGGCAGAAGGTGAGGATCACAGATGACATGGATC...CTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTTGTGGTCCACTTATTAATTGGAGGAAGCAGTTTTAAGTCTGTCATGGCCTCCCCCTTCTTTAATTaGCTGTTCTCCACCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVVVHLLIGGSSFKSVMASPFFN*LFSTLV Trigger: GACCAAGGTGGAGAACAGGCAATTAAAGAAGGGGGA...GGCCATGACAGACTTAAAACTGCTTCCTCCAATTAATAAGTGGACCACAACTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR CCA 90 bp | TTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCAGAGTTACTGACAGCTaGTGGACAACATTCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FIVPSLHSSCTRVQPGQARVTDS*WTTFLP Trigger: AGGCAAGAATGTTGTCCACCAGCTGTCAGTAACTCT...GGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCACAAAAGGTCAGTGTGGTACTGGCATCTCCAAAATAAGTCCTGAAAGTGTCTTCCAGAGTTACTaGCAGCTGGTGGACAACATT | + |
|
Preference number: 4 (lower is better) Translates to: RSTKGQCGTGISKISPESVFQSY*QLVDNI Trigger: AATGTTGTCCACCAGCTGTCAGTAACTCTGGAAGAC...ACTTTCAGGACTTATTTTGGAGATGCCAGTACCACACTGACCTTTTGTGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR TCA 90 bp | TCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACTACTAAAAACTGTATaGTCATCACCCCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCQVYIHHVLESNQARPLLKTV*SSPPSP Trigger: TGGAGAAGGGGGTGATGATCATACAGTTTTTAGTAG...TGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGGTTACTGACAGCTGGTaGACAACATTCTTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSLCQVYIHHVLESNQARVTDSW*TTFLPL Trigger: AAGAGGCAAGAATGTTGTCCACCAGCTGTCAGTAAC...CCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR CCA 90 bp | AAAACGTATGTTTTACTAGCCAGCAGTGTTCTTCAGGAGCCTGGTCCTGCTAGCCAAATTACATTTTTCTaGAGGGCCAGTTTCTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTYVLLASSVLQEPGPASQITFF*RASFLV Trigger: CACTAAGAAACTGGCCCTCCAGAAAAATGTAATTTG...GCTAGCAGGACCAGGCTCCTGAAGAACACTGCTGGCTAGTAAAACATACGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCAAATTACATTTTTCTaGAGGGCCAGTTTCTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCQVYIHHVLESNQARPHQITFF*RASFLV Trigger: CACTAAGAAACTGGCCCTCCAGAAAAATGTAATTTG...GTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR TCA 90 bp | GTAGTAACTAGAACACATTCCCAAGCAGCTGTCATTGCCAGCCAACTAGAACCTTCTTTTCTTAGGATCTaGAAGTACTTCATATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVTRTHSQAAVIASQLEPSFLRI*KYFICL Trigger: CAGGCATATGAAGTACTTTCAGATCCTAAGAAAAGA...AGGTTCTAGTTGGCTGGCAATGACAGCTGCTTGGGAATGTGTTCTAGTTACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGCTTAGCTTTCCTTAGGGAAAGAAAGCACTTTGGTGGGACAACACTGCAATTTTTATTGTCTTCTTaGAGCCACAAAGAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLAFLRERKHFGGTTLQFLLSS*SHKELQ Trigger: CTGAAGCTCTTTGTGGCTTCAAGAAGACAATAAAAA...TTGCAGTGTTGTCCCACCAAAGTGCTTTCTTTCCCTAAGGAAAGCTAAGCCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR TCA 90 bp | ATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACATTTTTATTGTCTTCTTaGAGCCACAAAGAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IVPSLHSSCTRVQPGQATFLLSS*SHKELQ Trigger: CTGAAGCTCTTTGTGGCTTCAAGAAGACAATAAAAA...TGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCACAAAGAACAAGGTATGGGGTTACAGGCAAATGGCTTTATTGGCTTATTTATCAAAGATATCCATaGGTGAAGAGAAGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RAQRTRYGVTGKWLYWLIYQRYP*VKRSWG Trigger: GCCCCAGCTTCTCTTCACCCATGGATATCTTTGATA...AATAAGCCAATAAAGCCATTTGCCTGTAACCCCATACCTTGTTCTTTGTGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCACAAAGAACAAGGTATGGGGTTACAGGCAAATGGCTTTATTGGCTTATTGTTACTGACAGCTGGTaGACAACATTCTTGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAQRTRYGVTGKWLYWLIVTDSW*TTFLPL Trigger: AAGAGGCAAGAATGTTGTCCACCAGCTGTCAGTAAC...AATAAGCCAATAAAGCCATTTGCCTGTAACCCCATACCTTGTTCTTTGTGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
||
| 3UTR CAA 72 bp | CCCAAACGTGAGGCTATTAAAGCGATGCCATTTTCATaGTGCCAAGTTTACATTCATCATGTACTAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKREAIKAMPFS*CQVYIHHVLES Trigger: GGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAATGGCATCGCTTTAATAGCCTCACGTTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| 3UTR CAA 72 bp | AAGAACAAGGTATGGGGTTACAGGCAAATGGCTTTATaGGCTTATTTAAAATGGGCTTGTCATCACAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KNKVWGYRQMAL*AYLKWACHHKA Trigger: AGCCTTGTGATGACAAGCCCATTTTAAATAAGCCAATAAAGCCATTTGCCTGTAACCCCATACCTTGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| CDS-3UTR TCA 90 bp | ATGCCATTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGTCTTTTCTTAGGATCTaGAAGTACTTCATATGCCTG | + |
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Preference number: 4 (lower is better) Translates to: MPFSLCQVYIHHVLESNQSFLRI*KYFICL Trigger: CAGGCATATGAAGTACTTTCAGATCCTAAGAAAAGA...CTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAATGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS GCA 90 bp | CCTGGCCCTTGCACTCGATGCACACAGTCTGGATCTGCTGCACCATaGCCGGCCCAATCTGCTGGATGTGGACCTGCATCCCCCGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: PGPCTRCTQSGSAAP*PAQSAGCGPASPAP Trigger: AGGGGCGGGGGATGCAGGTCCACATCCAGCAGATTGGGCCGGGCATGGTGCAGCAGATCCAGACTGTGTGCATCGAGTGCAAGGGCCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS GCA 90 bp | CGCTCGCCCTGGCCCTTGCACTCGATGCACACAGTCTGGATCTGCTaGACCATGCCCGGCCCAATCTGCTGGATGTGGACCTGCATCCCC | + |
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Preference number: 5 (lower is better) Translates to: RSPWPLHSMHTVWIC*TMPGPICWMWTCIP Trigger: GGGGATGCAGGTCCACATCCAGCAGATTGGGCCGGGCATGGTGCAGCAGATCCAGACTGTGTGCATCGAGTGCAAGGGCCAGGGCGAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS CCA 90 bp | GGGTTGATGCGCTCGCCCTGGCCCTTGCACTCGATGCACACAGTCTaGATCTGCTGCACCATGCCCGGCCCAATCTGCTGGATGTGGACC | + |
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Preference number: 5 (lower is better) Translates to: GLMRSPWPLHSMHTV*ICCTMPGPICWMWT Trigger: GGTCCACATCCAGCAGATTGGGCCGGGCATGGTGCAGCAGATCCAGACTGTGTGCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAACCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS CCA 90 bp | CCGCTGCAGTTCTCACAGCGGTCCTTGGGGTTGATGCGCTCGCCCTaGCCCTTGCACTCGATGCACACAGTCTGGATCTGCTGCACCATG | + |
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Preference number: 5 (lower is better) Translates to: PLQFSQRSLGLMRSP*PLHSMHTVWICCTM Trigger: CATGGTGCAGCAGATCCAGACTGTGTGCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAACCCCAAGGACCGCTGTGAGAACTGCAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS-3UTR CAA 90 bp | GTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGCAGCGGTCCTTGGGGTaGATGCGCTCGCCCTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: VPSLHSSCTRVQPGQATPQRSLG*MRSPWP Trigger: GGGCCAGGGCGAGCGCATCAACCCCAAGGACCGCTG...CGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS TCA 90 bp | TGGCGCCAGCTCTGCTCGTTGGGATTGAACTCCTTCAACTCCACCTaGTCCATGTCATCTGTGATCCTCACCTTCTGCCGAGGGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: WRQLCSLGLNSFNST*SMSSVILTFCRGGS Trigger: GCTTCCCCCTCGGCAGAAGGTGAGGATCACAGATGACATGGATCAGGTGGAGTTGAAGGAGTTCAATCCCAACGAGCAGAGCTGGCGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR CAA 90 bp | CCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACCGCACCCCTCATCCGGGTTCTaGTCCGGGTGGTACTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: PSLHSSCTRVQPGQATPHPSSGF*SGWYLS Trigger: GCTCAAGTACCACCCGGACAAGAACCCGGATGAGGG...GTGCGGTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR CAA 90 bp | CAAGGGGAAAGAACATTATGCCCTAGACTGTCTCTGCAGCTTTTGAGTCCAGCCTTCTCACAGCGGTCCTaGGGGTTGATGCGCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: QGERTLCPRLSLQLLSPAFSQRS*GLMRSP Trigger: GGGCGAGCGCATCAACCCCAAGGACCGCTGTGAGAA...GGCTGGACTCAAAAGCTGCAGAGACAGTCTAGGGCATAATGTTCTTTCCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| CDS-3UTR CAA 90 bp | TTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCACACTTCTCACAGCGGTCCTaGGGGTTGATGCGCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: LCQVYIHHVLESNQARPHFSQRS*GLMRSP Trigger: GGGCGAGCGCATCAACCCCAAGGACCGCTGTGAGAA...GTGTGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR CAA 90 bp | GCCATTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCCCTCATCCGGGTTCTaGTCCGGGTGGTACTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: AIFIVPSLHSSCTRVQPGPSSGF*SGWYLS Trigger: GCTCAAGTACCACCCGGACAAGAACCCGGATGAGGG...GCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR CAA 90 bp | ATGGGCCAGACACCCACCTTCTGGGCCTTTGTTAGGGGCCAAGAGTGGTCCTCTGTTTTTATTGTCTTCTaGAAGCCACAAAGAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: MGQTPTFWAFVRGQEWSSVFIVF*KPQRAS Trigger: TGAAGCTCTTTGTGGCTTCAAGAAGACAATAAAAAC...AGAGGACCACTCTTGGCCCCTAACAAAGGCCCAGAAGGTGGGTGTCTGGCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| CDS-3UTR CAA 90 bp | AAAACGTATGTTTTACTAGCCAGCAGTGTTCTTCAGGAGCCTGGTCCTGCTAGCTGGTGGACAACATTCTaGCCTCTTCTCTCTCTAGTC | + |
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Preference number: 5 (lower is better) Translates to: KTYVLLASSVLQEPGPASWWTTF*PLLSLV Trigger: GACTAGAGAGAGAAGAGGCAAGAATGTTGTCCACCA...GCTAGCAGGACCAGGCTCCTGAAGAACACTGCTGGCTAGTAAAACATACGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070070.8 |
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| CDS-3UTR CAA 90 bp | TCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGCCATGGTGGACAACATTCTaGCCTCTTCTCTCTCTAGTC | + |
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Preference number: 5 (lower is better) Translates to: SLCQVYIHHVLESNQARPWWTTF*PLLSLV Trigger: GACTAGAGAGAGAAGAGGCAAGAATGTTGTCCACCA...TGGCCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS-3UTR CAA 90 bp | TTTTCATTGTGCCAAGTTTACATTCATCATGTACTAGAGTCCAACCAGGCCAGGGTTTTTATTGTCTTCTaGAAGCCACAAAGAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: FSLCQVYIHHVLESNQARVFIVF*KPQRAS Trigger: TGAAGCTCTTTGTGGCTTCAAGAAGACAATAAAAAC...CCTGGCCTGGTTGGACTCTAGTACATGATGAATGTAAACTTGGCACAATGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS CCA 72 bp | GTCTGGATCTGCTGCACCATGCCCGGCCCAATCTGCTaGATGTGGACCTGCATCCCCCGCCCCTTGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: VWICCTMPGPIC*MWTCIPRPLHR Trigger: CCTGTGCAAGGGGCGGGGGATGCAGGTCCACATCCAGCAGATTGGGCCGGGCATGGTGCAGCAGATCCAGAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS CCA 72 bp | CGCTCGCCCTGGCCCTTGCACTCGATGCACACAGTCTaGATCTGCTGCACCATGCCCGGCCCAATCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSPWPLHSMHTV*ICCTMPGPICW Trigger: CCAGCAGATTGGGCCGGGCATGGTGCAGCAGATCCAGACTGTGTGCATCGAGTGCAAGGGCCAGGGCGAGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS TCA 72 bp | TGGCTCCGCTGCAGTTCTCACAGCGGTCCTTGGGGTTaGTGCGCTCGCCCTGGCCCTTGCACTCGATGCACA | + |
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Preference number: 6 (lower is better) Translates to: WLRCSSHSGPWG*CARPGPCTRCT Trigger: TGTGCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAACCCCAAGGACCGCTGTGAGAACTGCAGCGGAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS GCA 72 bp | ACAGTCTGGATCTGCTGCACCATGCCCGGCCCAATCTaGTGGATGTGGACCTGCATCCCCCGCCCCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: TVWICCTMPGPI*WMWTCIPRPLH Trigger: GTGCAAGGGGCGGGGGATGCAGGTCCACATCCAGCAGATTGGGCCGGGCATGGTGCAGCAGATCCAGACTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS CAA 72 bp | CAGCGGTCCTTGGGGTTGATGCGCTCGCCCTGGCCCTaGCACTCGATGCACACAGTCTGGATCTGCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: QRSLGLMRSPWP*HSMHTVWICCT Trigger: GGTGCAGCAGATCCAGACTGTGTGCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAACCCCAAGGACCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS CAA 90 bp | CGGGTAACCTTGGCTCCGCTGCAGTTCTCACAGCGGTCCTTGGGGTaGATGCGCTCGCCCTGGCCCTTGCACTCGATGCACACAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RVTLAPLQFSQRSLG*MRSPWPLHSMHTVW Trigger: CCAGACTGTGTGCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAACCCCAAGGACCGCTGTGAGAACTGCAGCGGAGCCAAGGTTACCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS CAA 90 bp | TTCTCTCGGGTAACCTTGGCTCCGCTGCAGTTCTCACAGCGGTCCTaGGGGTTGATGCGCTCGCCCTGGCCCTTGCACTCGATGCACACA | + |
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Preference number: 6 (lower is better) Translates to: FSRVTLAPLQFSQRS*GLMRSPWPLHSMHT Trigger: TGTGTGCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAACCCCAAGGACCGCTGTGAGAACTGCAGCGGAGCCAAGGTTACCCGAGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS GCA 72 bp | TGGCCCTTGCACTCGATGCACACAGTCTGGATCTGCTaGACCATGCCCGGCCCAATCTGCTGGATGTGGACC | + |
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Preference number: 6 (lower is better) Translates to: WPLHSMHTVWIC*TMPGPICWMWT Trigger: GGTCCACATCCAGCAGATTGGGCCGGGCATGGTGCAGCAGATCCAGACTGTGTGCATCGAGTGCAAGGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS CCA 72 bp | TTCTCACAGCGGTCCTTGGGGTTGATGCGCTCGCCCTaGCCCTTGCACTCGATGCACACAGTCTGGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: FSQRSLGLMRSP*PLHSMHTVWIC Trigger: GCAGATCCAGACTGTGTGCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAACCCCAAGGACCGCTGTGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS GCA 72 bp | TGCACTCGATGCACACAGTCTGGATCTGCTGCACCATaGCCGGCCCAATCTGCTGGATGTGGACCTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: CTRCTQSGSAAP*PAQSAGCGPAS Trigger: GGATGCAGGTCCACATCCAGCAGATTGGGCCGGGCATGGTGCAGCAGATCCAGACTGTGTGCATCGAGTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 ENSMUST00000154690.8 |
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| CDS CAA 90 bp | CCTTTCTCCACGTGCACCTCAATGATCTTCTTCTCTCGGGTAACCTaGGCTCCGCTGCAGTTCTCACAGCGGTCCTTGGGGTTGATGCGC | + |
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Preference number: 6 (lower is better) Translates to: PFSTCTSMIFFSRVT*APLQFSQRSLGLMR Trigger: GCGCATCAACCCCAAGGACCGCTGTGAGAACTGCAGCGGAGCCAAGGTTACCCGAGAGAAGAAGATCATTGAGGTGCACGTGGAGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS TCA 72 bp | CCTCCCTGTGCTGGCGCCAGCTCTGCTCGTTGGGATTaGACTCCTTCAACTCCACCTGATCCATGTCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PPCAGASSARWD*TPSTPPDPCHL Trigger: CAGATGACATGGATCAGGTGGAGTTGAAGGAGTTCAATCCCAACGAGCAGAGCTGGCGCCAGCACAGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS CAA 72 bp | ACGTGCACCTCAATGATCTTCTTCTCTCGGGTAACCTaGGCTCCGCTGCAGTTCTCACAGCGGTCCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: TCTSMIFFSRVT*APLQFSQRSLG Trigger: CCCCAAGGACCGCTGTGAGAACTGCAGCGGAGCCAAGGTTACCCGAGAGAAGAAGATCATTGAGGTGCACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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| CDS GCA 72 bp | GGCATCCCCTCGTTGCGGATACACTTCAGGTCCCCATaGTTTATCACCTCACCTGACTTAGATGAAATGACA | + |
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Preference number: 6 (lower is better) Translates to: GIPSLRIHFRSP*FITSPDLDEMT Trigger: TGTCATTTCATCTAAGTCAGGTGAGGTGATAAAGCATGGGGACCTGAAGTGTATCCGCAACGAGGGGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070070.8 ENSMUST00000120452.8 |
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