Pregenerated sensors for DNAJA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004069Ensembl transcript IDs: ENSMUST00000060067.12, ENSMUST00000115854.4, ENSMUST00000229529.2
Found 191 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTaGTGCCCTGGCCACAGAGAGGAGCTGCTGCTCCATTTAGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: WEQGLSAAVLGSSCV*CPGHREELLLHLVS Trigger: GGAAACTAAATGGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
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| 3UTR CCA 90 bp | GTGTTGTCACATAGTTTTGCTGTTGCTCGGCGGTTCAGAGGGATCTaGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: VLSHSFAVARRFRGI*EQGLSAAVLGSSCV Trigger: GACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCTCTGAACCGCCGAGCAACAGCAAAACTATGTGACAACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR TCA 90 bp | ATGGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGGCTaGAGGCTATCCCATAGGACCATGGAAACTTTGGTCCAACAGGGC | + |
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Preference number: 1 (lower is better) Translates to: MENQALAGKLWVSRG*RLSHRTMETLVQQG Trigger: GCCCTGTTGGACCAAAGTTTCCATGGTCCTATGGGATAGCCTTCAGCCTCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR CCA 90 bp | AGAGGACCTTTAACACAGAAGCTGCAGCATGCTACCAGCAGAGGCTaGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTTCACCGATG | + |
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Preference number: 1 (lower is better) Translates to: RGPLTQKLQHATSRG*KGSCSVHCGGPSPM Trigger: CATCGGTGAAGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCCTCTGCTGGTAGCATGCTGCAGCTTCTGTGTTAAAGGTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR CCA 90 bp | GCAAGCTCTGGGTCTCCAGAGGCTGAAGGCTATCCCATAGGACCATaGAAACTTTGGTCCAACAGGGCAGGAAACCCCACATACATCAGA | + |
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Preference number: 1 (lower is better) Translates to: ASSGSPEAEGYPIGP*KLWSNRAGNPTYIR Trigger: TCTGATGTATGTGGGGTTTCCTGCCCTGTTGGACCAAAGTTTCCATGGTCCTATGGGATAGCCTTCAGCCTCTGGAGACCCAGAGCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR CCA 90 bp | ACACTGGAAATCAAATGTCAGCAGTGGAAATGGAGAACCAAGCCCTaGCAGGCAAGCTCTGGGTCTCCAGAGGCTGAAGGCTATCCCATA | + |
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Preference number: 1 (lower is better) Translates to: TLEIKCQQWKWRTKP*QASSGSPEAEGYPI Trigger: TATGGGATAGCCTTCAGCCTCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCCACTGCTGACATTTGATTTCCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR CCA 90 bp | CGGAGTAATTTAAATACACTGGAAATCAAATGTCAGCAGTGGAAATaGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: RSNLNTLEIKCQQWK*RTKPWQASSGSPEA Trigger: AGCCTCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCCACTGCTGACATTTGATTTCCAGTGTATTTAAATTACTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR GCA 90 bp | TCTGAAGCTGTAAGCCGGGTCTTTAATTCTTTCAGCTCTACTACATaGGATTCCAGGTTAGTTTTAGTGCTGCAAGAAGAGTCCAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: SEAVSRVFNSFSSTT*DSRLVLVLQEESKC Trigger: ACACTTGGACTCTTCTTGCAGCACTAAAACTAACCTGGAATCGCATGTAGTAGAGCTGAAAGAATTAAAGACCCGGCTTACAGCTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR CCA 90 bp | GCTGGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTTCACCGATaGTATTGTCATTTAACATTTACACAGGAAAAGACAATGAAATTT | + |
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Preference number: 1 (lower is better) Translates to: AGKEVALSTVEGLHR*YCHLTFTQEKTMKF Trigger: AAATTTCATTGTCTTTTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR GCA 90 bp | GGAAATGGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGGCTGAAGGCAGGGGCTCAGTGCTaGCGTTCTGGGATCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GNGEPSPGRQALGLQRLKAGAQC*RSGILL Trigger: CAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGC...CTTCAGCCTCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCCATCTGAGGTGAAATGGAACCTGCTGTTGCTAGGTGTCCTCCCAGGGCCCCTCTGTCCAGGAAGATaGCGCTGGTGGGATGTGCCG | + |
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Preference number: 2 (lower is better) Translates to: LPSEVKWNLLLLGVLPGPLCPGR*RWWDVP Trigger: CGGCACATCCCACCAGCGCCATCTTCCTGGACAGAG...GGGCCCTGGGAGGACACCTAGCAACAGCAGGTTCCATTTCACCTCAGATGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR TCA 90 bp | GGAAATGGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGGCTGAAGAACCTGGGGAGTGACTaGCAGCTCACTCTGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GNGEPSPGRQALGLQRLKNLGSD*QLTLSR Trigger: CCTGGACAGAGTGAGCTGTCAGTCACTCCCCAGGTT...CTTCAGCCTCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR CCA 90 bp | GGAAATGGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGGCTGAAGCTGTGTCTGATGCCCTaGCCACAGAGAGGAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GNGEPSPGRQALGLQRLKLCLMP*PQRGAA Trigger: AGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAG...CTTCAGCCTCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR TCA 90 bp | ATGCTACCAGCAGAGGCTGGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTTAACCTGGGGAGTGACTaGCAGCTCACTCTGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: MLPAEAGKEVALSTVEGLNLGSD*QLTLSR Trigger: CCTGGACAGAGTGAGCTGTCAGTCACTCCCCAGGTT...AAGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCCTCTGCTGGTAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR CCA 90 bp | TACCAGCAGAGGCTGGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTTCACCTCAGTGCTGCCGTTCTaGGATCCTCCTGTGTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: YQQRLERKLLCPLWRAFTSVLPF*DPPVSD Trigger: ATCAGACACAGGAGGATCCCAGAACGGCAGCACTGA...GGTGAAGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCCTCTGCTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTGTCCACTGTGGAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACTGGGTCTCCAGAGGCTaGAGGCTATCCCATAGGACC | + |
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Preference number: 2 (lower is better) Translates to: CSVHCGGPSPMVLSFNIYWVSRG*RLSHRT Trigger: GGTCCTATGGGATAGCCTTCAGCCTCTGGAGACCCA...GTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGACAGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR GCA 90 bp | GAAAGTGTTCTTCCTGTCTTACACGAGCTCCAGAGGACCTTTAACACAGAAGCTGGCTGGAAAGGAAGTTaGTCTGTCCACTGTGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: ESVLPVLHELQRTFNTEAGWKGS*SVHCGG Trigger: CCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCC...AGCTTCTGTGTTAAAGGTCCTCTGGAGCTCGTGTAAGACAGGAAGAACACTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR TCA 90 bp | TGCTCTGTCCACTGTGGAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACAGGCAAGCTGCCATCTaGGGTGAAATGGAACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CSVHCGGPSPMVLSFNIYRQAAI*GEMEPA Trigger: AGCAGGTTCCATTTCACCTCAGATGGCAGCTTGCCT...GTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGACAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR GCA 90 bp | ATGCTACCAGCAGAGGCTGGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTTATCACTTCACAACACTaGAGCTTAAAGCTTCATCTG | + |
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Preference number: 2 (lower is better) Translates to: MLPAEAGKEVALSTVEGLITSQH*SLKLHL Trigger: CAGATGAAGCTTTAAGCTGCAGTGTTGTGAAGTGAT...AAGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCCTCTGCTGGTAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR CCA 90 bp | AAAGCTTCATCTGAAGCTGTAAGCCGGGTCTTTAATTCTTTCAGCTCTACTACACGGTTCAGAGGGATCTaGGAGCAGGGGCTCAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: KASSEAVSRVFNSFSSTTRFRGI*EQGLSA Trigger: AGCACTGAGCCCCTGCTCCCAGATCCCTCTGAACCG...TGTAGTAGAGCTGAAAGAATTAAAGACCCGGCTTACAGCTTCAGATGAAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR-3UTR TCA 90 bp | GAGAAAGTGTTCTTCCTGTCTTACACGAGCTCCAGAGGACCTTTAACACAGAAGCATTTAGTTTCCAGTTaGCCGCTTTCCTCAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: EKVFFLSYTSSRGPLTQKHLVSS*PLSSAG Trigger: CCCTGCTGAGGAAAGCGGTCAACTGGAAACTAAATG...CTTCTGTGTTAAAGGTCCTCTGGAGCTCGTGTAAGACAGGAAGAACACTTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060067.12 |
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| 3UTR GCA 72 bp | GCGGTTCAGAGGGATCTGGGAGCAGGGGCTCAGTGCTaGCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: AVQRDLGAGAQC*RSGILLCLMPW Trigger: CCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCTCTGAACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR GCA 72 bp | TCGGCGGTTCAGAGGGATCTGGGAGCAGGGGCTCAGTaGTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCC | + |
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Preference number: 3 (lower is better) Translates to: SAVQRDLGAGAQ*CRSGILLCLMP Trigger: GGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCTCTGAACCGCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR CCA 72 bp | GAGGGATCTGGGAGCAGGGGCTCAGTGCTGCCGTTCTaGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: EGSGSRGSVLPF*DPPVSDALATE Trigger: CTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR TCA 72 bp | GGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTaGTGCCCTGGCCACAGAGAGGAGCTGCTGCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: GLSAAVLGSSCV*CPGHREELLLH Trigger: ATGGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| 3UTR CCA 72 bp | AGTCCACTGCCAGGCAAGCTGCCATCTGAGGTGAAATaGAACCTGCTGTTGCTAGGTGTCCTCCCAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: SPLPGKLPSEVK*NLLLLGVLPGP Trigger: GGGCCCTGGGAGGACACCTAGCAACAGCAGGTTCCATTTCACCTCAGATGGCAGCTTGCCTGGCAGTGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR TCA 72 bp | CAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGGCTaGAGGCTATCCCATAGGACCATGGAAACTTTGGTC | + |
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Preference number: 3 (lower is better) Translates to: QALAGKLWVSRG*RLSHRTMETLV Trigger: GACCAAAGTTTCCATGGTCCTATGGGATAGCCTTCAGCCTCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR TCA 72 bp | GAACACTCTAAGTCCACTGCCAGGCAAGCTGCCATCTaGGGTGAAATGGAACCTGCTGTTGCTAGGTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: EHSKSTARQAAI*GEMEPAVARCP Trigger: AGGACACCTAGCAACAGCAGGTTCCATTTCACCTCAGATGGCAGCTTGCCTGGCAGTGGACTTAGAGTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR CCA 72 bp | GAGGCTGAAGGCTATCCCATAGGACCATGGAAACTTTaGTCCAACAGGGCAGGAAACCCCACATACATCAGA | + |
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Preference number: 3 (lower is better) Translates to: EAEGYPIGPWKL*SNRAGNPTYIR Trigger: TCTGATGTATGTGGGGTTTCCTGCCCTGTTGGACCAAAGTTTCCATGGTCCTATGGGATAGCCTTCAGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR CCA 72 bp | TTAAATACACTGGAAATCAAATGTCAGCAGTGGAAATaGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LNTLEIKCQQWK*RTKPWQASSGS Trigger: AGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCCACTGCTGACATTTGATTTCCAGTGTATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR CCA 72 bp | GAAGTTGCTCTGTCCACTGTGGAGGGCCTTCACCGATaGTATTGTCATTTAACATTTACACAGGAAAAGACA | + |
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Preference number: 3 (lower is better) Translates to: EVALSTVEGLHR*YCHLTFTQEKT Trigger: TGTCTTTTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGACAGAGCAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| 3UTR GCA 72 bp | GTAAGCCGGGTCTTTAATTCTTTCAGCTCTACTACATaGGATTCCAGGTTAGTTTTAGTGCTGCAAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: VSRVFNSFSSTT*DSRLVLVLQEE Trigger: CTCTTCTTGCAGCACTAAAACTAACCTGGAATCGCATGTAGTAGAGCTGAAAGAATTAAAGACCCGGCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR GCA 90 bp | GGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCGGGGAGTCCCCACTaGCACCCTCAACCAGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GAGAQCCRSGILLCLMPWPGSPH*HPQPAW Trigger: CCACGCTGGTTGAGGGTGGCAGTGGGGACTCCCCGG...CCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR GCA 90 bp | AGGGATCTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGCCGGGGAGTCCCCACTaGCACCCTCAACCAGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: RDLGAGAQCCRSGILLCLPGSPH*HPQPAW Trigger: CCACGCTGGTTGAGGGTGGCAGTGGGGACTCCCCGG...CAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR GCA 90 bp | GGAAATGGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGGCTGAAGCCGGGGAGTCCCCACTaGCACCCTCAACCAGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GNGEPSPGRQALGLQRLKPGSPH*HPQPAW Trigger: CCACGCTGGTTGAGGGTGGCAGTGGGGACTCCCCGG...CTTCAGCCTCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR GCA 90 bp | AGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGCCCAGAGCTGCTGGTaGCAGGGTCAAAGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: RGSVLPFWDPPVSDALATAQSCW*QGQSQQ Trigger: CTGCTGGCTTTGACCCTGGCACCAGCAGCTCTGGGC...TGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CCA 90 bp | CTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCCACCCTCAACCAGCGTaGGGAACACCACGCAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LGAGAQCCRSGILLCLMPHPQPA*GTPRSH Trigger: ATGGCTGCGTGGTGTTCCCCACGCTGGTTGAGGGTG...GGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CCA 90 bp | GCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCAGTCTCATACAGGCCCTaGGCTTTGGCTGTGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: AGAQCCRSGILLCLMPWPVSYRP*ALAVPP Trigger: TGGGGGCACAGCCAAAGCCCAGGGCCTGTATGAGAC...TGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR GCA 90 bp | TCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGGCCCAGAGCTGCTGGTaGCAGGGTCAAAGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SVLPFWDPPVSDALATERAQSCW*QGQSQQ Trigger: CTGCTGGCTTTGACCCTGGCACCAGCAGCTCTGGGC...CCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR GCA 90 bp | TGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTCAGGCTCGTTCCCCTTaGCGTCACAGCGCTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: CCRSGILLCLMPWPQRGAQARSP*RHSAHR Trigger: CCTGTGAGCGCTGTGACGGCAAGGGGAACGAGCCTG...AGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR GCA 90 bp | TCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGCAGGCTCGTTCCCCTTaGCGTCACAGCGCTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: SVLPFWDPPVSDALATERQARSP*RHSAHR Trigger: CCTGTGAGCGCTGTGACGGCAAGGGGAACGAGCCTG...CCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR GCA 90 bp | TGCTGTTGCTCGGCGGTTCAGAGGGATCTGGGAGCAGGGGCTCAGTGCTGCCGTCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACA | + |
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Preference number: 4 (lower is better) Translates to: CCCSAVQRDLGAGAQCCRLLGLS*SPADHT Trigger: TGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG...ACGGCAGCACTGAGCCCCTGCTCCCAGATCCCTCTGAACCGCCGAGCAACAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR GCA 90 bp | CTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCGTCACGCGCTTCTTCTaGTTGGCTTGTCCTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LGAGAQCCRSGILLCLMPVTRFF*LACPAP Trigger: GGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGAC...GGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR GCA 90 bp | GTTGCTCGGCGGTTCAGAGGGATCTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGCTTGTCCTGCTCCCCTaGAGACCACACAGGGATTTG | + |
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Preference number: 4 (lower is better) Translates to: VARRFRGIWEQGLSAAVLLVLLP*RPHRDL Trigger: CAAATCCCTGTGTGGTCTGCAGGGGAGCAGGACAAG...CAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCTCTGAACCGCCGAGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR GCA 90 bp | GGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGCTCAGGATCAGGTTCTaGTGCCTACTGCTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRGSVLPFWDPPVSDALLRIRF*CLLLSL Trigger: GAGGCTGAGCAGTAGGCAGCAGAACCTGATCCTGAG...CAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCAGGCAATGCTGCACTTTaGTTCCAGGCTCGTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGAQCCRSGILLCLMPWPGNAAL*FQARSP Trigger: AGGGGAACGAGCCTGGAACCAAAGTGCAGCATTGCC...TGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCCTGCGGAGCTATCCATaGTTCTGCCACCAGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRGSVLPFWDPPVSDALALRSYP*FCHQCL Trigger: CAAGCACTGGTGGCAGAACCATGGATAGCTCCGCAG...GGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACA | + |
|
Preference number: 4 (lower is better) Translates to: SVLPFWDPPVSDALATERLLGLS*SPADHT Trigger: TGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG...CCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | GGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCATTTGTCCGAGTGGATGTCTaGACCGTCCCTCCGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GILLCLMPWPQRGAAAPFVRVDV*TVPPEH Trigger: GTGTTCCGGAGGGACGGTGCAGACATCCACTCGGAC...AAATGGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | GGAAATGGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGGCTGAAGCACCCTCAACCAGCGTaGGGAACACCACGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNGEPSPGRQALGLQRLKHPQPA*GTPRSH Trigger: ATGGCTGCGTGGTGTTCCCCACGCTGGTTGAGGGTG...CTTCAGCCTCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGATAAAGAGGTCCGAGTaGATGTCTGCACCGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQCCRSGILLCLMPWIKRSE*MSAPSL Trigger: GAGGGACGGTGCAGACATCCACTCGGACCTCTTTAT...CCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCATCTGAGGTGAAATGGAACCTGCTGTTGCTAGGTGTCCTCCCAGGGCCCGTCTCATACAGGCCCTaGGCTTTGGCTGTGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSEVKWNLLLLGVLPGPVSYRP*ALAVPP Trigger: TGGGGGCACAGCCAAAGCCCAGGGCCTGTATGAGAC...GGGCCCTGGGAGGACACCTAGCAACAGCAGGTTCCATTTCACCTCAGATGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | ATGCTACCAGCAGAGGCTGGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTTGCCCAGAGCTGCTGGTaGCAGGGTCAAAGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MLPAEAGKEVALSTVEGLAQSCW*QGQSQQ Trigger: CTGCTGGCTTTGACCCTGGCACCAGCAGCTCTGGGC...AAGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCCTCTGCTGGTAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGACTTGTCCTGCTCCCCTaGAGACCACACAGGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQCCRSGILLCLMPWPQRLVLLP*RPHRDL Trigger: CAAATCCCTGTGTGGTCTGCAGGGGAGCAGGACAAG...TCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGGTTCTGCTGCCTACTaGTCAGCCTCTTTGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSVLPFWDPPVSDALATGSAAY*SASLEL Trigger: GAGTTCCAAAGAGGCTGAGCAGTAGGCAGCAGAACC...TGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCACTCAGGATCAGGTTCTaGTGCCTACTGCTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGILLCLMPWPQRGAAAPLRIRF*CLLLSL Trigger: GAGGCTGAGCAGTAGGCAGCAGAACCTGATCCTGAG...TGGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTCCTCTCGCCTATCCTTaGTTCCTGCGGAGCTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CCRSGILLCLMPWPQRGAPLAYP*FLRSYP Trigger: TGGATAGCTCCGCAGGAAGCAAGGATAGGCGAGAGG...AGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | CATGCTACCAGCAGAGGCTGGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTCACCCTCAACCAGCGTaGGGAACACCACGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: HATSRGWKGSCSVHCGGPHPQPA*GTPRSH Trigger: ATGGCTGCGTGGTGTTCCCCACGCTGGTTGAGGGTG...AGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCCTCTGCTGGTAGCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR TCA 90 bp | TTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCCCCCAAAGATCTTCCTaGACAACTCCTCGGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FWDPPVSDALATERSCCSPQRSS*TTPRGQ Trigger: TTGACCCCGAGGAGTTGTTCAGGAAGATCTTTGGGG...GGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAATCTTCTGGTCTGTCTaGATCCCTGCAGGGATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QCCRSGILLCLMPWPQRGIFWSV*IPAGIV Trigger: GACGATCCCTGCAGGGATTCAGACAGACCAGAAGAT...TCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCATCTGAGGTGAAATGGAACCTGCTGTTGCTAGGTGTCCTCCCAGGGCCCCAGAGACGCACAGCTTaGGACACAGGGATGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSEVKWNLLLLGVLPGPQRRTA*DTGMLP Trigger: TGGCAACATCCCTGTGTCGCAAGCTGTGCGTCTCTG...GGGCCCTGGGAGGACACCTAGCAACAGCAGGTTCCATTTCACCTCAGATGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCCACCTCATAAGCTTCTaGCAGCTGGGAAAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGAGAQCCRSGILLCLMPHLISF*QLGKLL Trigger: GAGAAGTTTTCCCAGCTGGCAGAAGCTTATGAGGTG...GGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGTGGAAATGGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGTCACGCGCTTCTTCTaGTTGGCTTGTCCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SAVEMENQALAGKLWVSRVTRFF*LACPAP Trigger: GGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGAC...TCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCCACTGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGACCATCTTCAACTCCTaGAGGCACAGGAATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQCCRSGILLCLMPWTIFNS*RHRNCH Trigger: GTGACAATTCCTGTGCCTGCAGGAGTTGAAGATGGT...CCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCAACCATCTTCAACTCCTaGAGGCACAGGAATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGAQCCRSGILLCLMPWPTIFNS*RHRNCH Trigger: GTGACAATTCCTGTGCCTGCAGGAGTTGAAGATGGT...TGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR GCA 90 bp | AGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCGTCTGTCTGAATCCCTaGAGGGATCGTCACATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRGSVLPFWDPPVSDALAVCLNP*RDRHID Trigger: ATCAATGTGACGATCCCTGCAGGGATTCAGACAGAC...GGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR GCA 90 bp | TCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGGGTTCTGCTGCCTACTaGTCAGCCTCTTTGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLPFWDPPVSDALATERGSAAY*SASLEL Trigger: GAGTTCCAAAGAGGCTGAGCAGTAGGCAGCAGAACC...CCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR GCA 90 bp | TGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTAGCTATCCATGGTTCTaGCACCAGTGCTTGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CCRSGILLCLMPWPQRGASYPWF*HQCLCG Trigger: CCCACACAAGCACTGGTGGCAGAACCATGGATAGCT...AGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
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| CDS-3UTR CCA 90 bp | CCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCCACATCTCCGACATGTaGAACGCATCACAAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFWDPPVSDALATERSCCHISDM*NASQKA Trigger: GGCCTTTTGTGATGCGTTCCACATGTCGGAGATGTG...GCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CCA 90 bp | TGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTATAAAGAGGTCCGAGTaGATGTCTGCACCGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRSGILLCLMPWPQRGAAIKRSE*MSAPSL Trigger: GAGGGACGGTGCAGACATCCACTCGGACCTCTTTAT...AGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CCA 90 bp | CAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGACCACCAGTGCTTGTGTaGGTGACTCCATTAACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QCCRSGILLCLMPWPQRGPPVLV*VTPLTV Trigger: GACGGTTAATGGAGTCACCCACACAAGCACTGGTGG...TCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCATCTGAGGTGAAATGGAACCTGCTGTTGCTAGGTGTCCTCCCAGGGCCCCTGCGGAGCTATCCATaGTTCTGCCACCAGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSEVKWNLLLLGVLPGPLRSYP*FCHQCL Trigger: CAAGCACTGGTGGCAGAACCATGGATAGCTCCGCAG...GGGCCCTGGGAGGACACCTAGCAACAGCAGGTTCCATTTCACCTCAGATGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060067.12 |
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| CDS-3UTR TCA 90 bp | AGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACACCCTTGGCAGCTTaGTTGAATGTCAATTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SRGSVLPFWDPPVSDALATPLAA*LNVNSM Trigger: CATGGAATTGACATTCAATCAAGCTGCCAAGGGTGT...GGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR TCA 90 bp | GCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCAACACCCTTGGCAGCTTaGTTGAATGTCAATTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AGAQCCRSGILLCLMPWPTPLAA*LNVNSM Trigger: CATGGAATTGACATTCAATCAAGCTGCCAAGGGTGT...TGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGTGGAAATGGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGACAGAGACGCACAGCTTaGGACACAGGGATGTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAVEMENQALAGKLWVSRQRRTA*DTGMLP Trigger: TGGCAACATCCCTGTGTCGCAAGCTGTGCGTCTCTG...TCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCCACTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | TCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCAAGGATCAGGTTCTGCTaGCTACTGCTCAGCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGILLCLMPWPQRGAAAPRIRFC*LLLSLF Trigger: AAAGAGGCTGAGCAGTAGGCAGCAGAACCTGATCCT...TGGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | TGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTAGGATCAGGTTCTGCTaGCTACTGCTCAGCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CRSGILLCLMPWPQRGAARIRFC*LLLSLF Trigger: AAAGAGGCTGAGCAGTAGGCAGCAGAACCTGATCCT...AGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGCCTATCCTTGCTTCCTaGGGAGCTATCCATGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLPFWDPPVSDALATERPILAS*GAIHGS Trigger: AGAACCATGGATAGCTCCGCAGGAAGCAAGGATAGG...CCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGCACATCTCCGACATGTaGAACGCATCACAAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVLPFWDPPVSDALATERHISDM*NASQKA Trigger: GGCCTTTTGTGATGCGTTCCACATGTCGGAGATGTG...CCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACTGCTCAGCCTCTTTaGAACTCTGATCTTGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRGSVLPFWDPPVSDALATAQPL*NSDLDV Trigger: CACATCAAGATCAGAGTTCCAAAGAGGCTGAGCAGT...GGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTGCTCGGCGGTTCAGAGGGATCTGGGAGCAGGGGCTCAGTGCTGCCGTACCAAAAGGAGAAGATaGGAACTCCCCAAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCCSAVQRDLGAGAQCCRTKRRR*ELPKDL Trigger: AAGATCTTTGGGGAGTTCTCATCTTCTCCTTTTGGT...ACGGCAGCACTGAGCCCCTGCTCCCAGATCCCTCTGAACCGCCGAGCAACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | CAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGACACCTCATAAGCTTCTaGCAGCTGGGAAAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QCCRSGILLCLMPWPQRGHLISF*QLGKLL Trigger: GAGAAGTTTTCCCAGCTGGCAGAAGCTTATGAGGTG...TCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | TGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTCACCTCATAAGCTTCTaGCAGCTGGGAAAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CRSGILLCLMPWPQRGAAHLISF*QLGKLL Trigger: GAGAAGTTTTCCCAGCTGGCAGAAGCTTATGAGGTG...AGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCCACAGAGAGGAGCTGCTGCTCCATTTAGTTTCCAGTTGACCGCTTTCCTTGTCCTGCTCCCCTaGAGACCACACAGGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: PWPQRGAAAPFSFQLTAFLVLLP*RPHRDL Trigger: CAAATCCCTGTGTGGTCTGCAGGGGAGCAGGACAAG...GAAAGCGGTCAACTGGAAACTAAATGGAGCAGCAGCTCCTCTCTGTGGCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | CCCACATACATCAGACTAGAACACTCTAAGTCCACTGCCAGGCAAGCTGCCATCGTCCGAGTGGATGTCTaGACCGTCCCTCCGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: PTYIRLEHSKSTARQAAIVRVDV*TVPPEH Trigger: GTGTTCCGGAGGGACGGTGCAGACATCCACTCGGAC...GATGGCAGCTTGCCTGGCAGTGGACTTAGAGTGTTCTAGTCTGATGTATGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | CTGCCATCTGAGGTGAAATGGAACCTGCTGTTGCTAGGTGTCCTCCCAGGGCCCCCTATCCTTGCTTCCTaGGGAGCTATCCATGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSEVKWNLLLLGVLPGPPILAS*GAIHGS Trigger: AGAACCATGGATAGCTCCGCAGGAAGCAAGGATAGG...GGGCCCTGGGAGGACACCTAGCAACAGCAGGTTCCATTTCACCTCAGATGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060067.12 |
||
| CDS-3UTR CCA 90 bp | CGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTTTCTCGTTTTCCCACTaGCATCCTTACAGTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: RSGILLCLMPWPQRGAAAFSFSH*HPYSLT Trigger: GGTCAGACTGTAAGGATGCCAGTGGGAAAACGAGAA...AGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCATTTCCAGTGCTTGTGTaGGTGACTCCATTAACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGILLCLMPWPQRGAAAPFPVLV*VTPLTV Trigger: GACGGTTAATGGAGTCACCCACACAAGCACTGGAAA...TGGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115854.4 |
||
| CDS-3UTR TCA 90 bp | ATGCTACCAGCAGAGGCTGGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTTCCCCAAAGATCTTCCTaGACAACTCCTCGGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MLPAEAGKEVALSTVEGLPQRSS*TTPRGQ Trigger: TTGACCCCGAGGAGTTGTTCAGGAAGATCTTTGGGG...AAGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCCTCTGCTGGTAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | TGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCATTGTCTGTCTGAATCCCTaGAGGGATCGTCACATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WDPPVSDALATERSCCSIVCLNP*RDRHID Trigger: ATCAATGTGACGATCCCTGCAGGGATTCAGACAGAC...AATGGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGGCCACAGAGAGGAGCTGCTGCTCCATTTAGTTTCCAGTTGACCGCTTTCGGTTCTGCTGCCTACTaGTCAGCCTCTTTGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PWPQRGAAAPFSFQLTAFGSAAY*SASLEL Trigger: GAGTTCCAAAGAGGCTGAGCAGTAGGCAGCAGAACC...GAAAGCGGTCAACTGGAAACTAAATGGAGCAGCAGCTCCTCTCTGTGGCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGAQCCRSGILLCLMPWTSPWL*DHPYLC Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...CCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCACTGCTCAGCCTCTTTaGAACTCTGATCTTGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: FWDPPVSDALATERSCCSTAQPL*NSDLDV Trigger: CACATCAAGATCAGAGTTCCAAAGAGGCTGAGCAGT...GGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| 3UTR CAA 72 bp | CTTTATGCGGAGAAGTGTTGTCACATAGTTTTGCTGTaGCTCGGCGGTTCAGAGGGATCTGGGAGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYAEKCCHIVLL*LGGSEGSGSRG Trigger: GCCCCTGCTCCCAGATCCCTCTGAACCGCCGAGCAACAGCAAAACTATGTGACAACACTTCTCCGCATAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR TCA 90 bp | GTTCAGAGGGATCTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGAATAGCTTGAGCTATTaGAATAAAGAGGTCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VQRDLGAGAQCCRSGILLNSLSY*NKEVRV Trigger: CACTCGGACCTCTTTATTTCAATAGCTCAAGCTATT...CAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCTCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR TCA 90 bp | AGGGATCTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGAATAGCTTGAGCTATTaGAATAAAGAGGTCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDLGAGAQCCRSGILLCLNSLSY*NKEVRV Trigger: CACTCGGACCTCTTTATTTCAATAGCTCAAGCTATT...CAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTCCCCCAAGAATAGCTTaGGCTATTGAAATAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCRSGILLCLMPWPQRGAPPRIA*AIEIKR Trigger: CCTCTTTATTTCAATAGCTCAAGCTATTCTTGGGGG...AGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAAAGAAGCACTTGTGTaGAAAGAGGTGGTACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GSVLPFWDPPVSDALATEKEALV*KEVVQT Trigger: TGTTTGTACCACCTCTTTCCACACAAGTGCTTCTTT...CTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | TGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGGGAAAACTTCTCCTTaGCTTTGGGATCATCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CRSGILLCLMPWPQRGAAGKTSP*LWDHPY Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTTTCCC...AGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGGGGAAAACTTCTCCTTaGCTTTGGGATCATCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLPFWDPPVSDALATERGKTSP*LWDHPY Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTTTCCC...CCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR TCA 90 bp | GCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAAATAGCTTGAGCTATTaGAATAAAGAGGTCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQCCRSGILLCLMPWPQRNSLSY*NKEVRV Trigger: CACTCGGACCTCTTTATTTCAATAGCTCAAGCTATT...TCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR TCA 90 bp | GGAAATGGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGGCTGAAGCCCCCAAGAATAGCTTaGGCTATTGAAATAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNGEPSPGRQALGLQRLKPPRIA*AIEIKR Trigger: CCTCTTTATTTCAATAGCTCAAGCTATTCTTGGGGG...CTTCAGCCTCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGTCCACTGTGGAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACGTCCGAGTGGATGTCTaGACCGTCCCTCCGGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: CSVHCGGPSPMVLSFNIYVRVDV*TVPPEH Trigger: GTGTTCCGGAGGGACGGTGCAGACATCCACTCGGAC...GTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGACAGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | CGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTAAAGAAGCACTTGTGTaGAAAGAGGTGGTACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RSGILLCLMPWPQRGAAAKEALV*KEVVQT Trigger: TGTTTGTACCACCTCTTTCCACACAAGTGCTTCTTT...AGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGGTAATAATCATCTTTaGCCAAAGAAGCACTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGSVLPFWDPPVSDALATGNNHL*PKKHLC Trigger: ACACAAGTGCTTCTTTGGCCAAAGATGATTATTACC...TGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGTGTTCTTCCTGTCTTACACGAGCTCCAGAGGACCTTTAACACAGAAGGTCTCATACAGGCCCTaGGCTTTGGCTGTGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EKVFFLSYTSSRGPLTQKVSYRP*ALAVPP Trigger: TGGGGGCACAGCCAAAGCCCAGGGCCTGTATGAGAC...CTTCTGTGTTAAAGGTCCTCTGGAGCTCGTGTAAGACAGGAAGAACACTTTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGTGTTCTTCCTGTCTTACACGAGCTCCAGAGGACCTTTAACACAGAAGGTCACGCGCTTCTTCTaGTTGGCTTGTCCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EKVFFLSYTSSRGPLTQKVTRFF*LACPAP Trigger: GGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGAC...CTTCTGTGTTAAAGGTCCTCTGGAGCTCGTGTAAGACAGGAAGAACACTTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | TCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGGGTAATAATCATCTTTaGCCAAAGAAGCACTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVLPFWDPPVSDALATERGNNHL*PKKHLC Trigger: ACACAAGTGCTTCTTTGGCCAAAGATGATTATTACC...CCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCGGTAATAATCATCTTTaGCCAAAGAAGCACTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FWDPPVSDALATERSCCSGNNHL*PKKHLC Trigger: ACACAAGTGCTTCTTTGGCCAAAGATGATTATTACC...GGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGTGGAAATGGAGAACCAAGCCCTGGCAGGCAAGCTCTGGGTCTCCAGAGGGAAAACTTCTCCTTaGCTTTGGGATCATCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SAVEMENQALAGKLWVSRGKTSP*LWDHPY Trigger: ATAAGGATGATCCCAAAGCCAAGGAGAAGTTTTCCC...TCTGGAGACCCAGAGCTTGCCTGCCAGGGCTTGGTTCTCCATTTCCACTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | TCCACTGTGGAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAACTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACA | + |
|
Preference number: 4 (lower is better) Translates to: STVEGLHRWYCHLTFTQELLGLS*SPADHT Trigger: TGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAG...TTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | CATGCTACCAGCAGAGGCTGGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTACTTCTCCTTGGCTTTaGGATCATCCTTATTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HATSRGWKGSCSVHCGGPTSPWL*DHPYLC Trigger: ACACAAATAAGGATGATCCCAAAGCCAAGGAGAAGT...AGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCCTCTGCTGGTAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGTCCACTGTGGAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACAGCTATCCATGGTTCTaGCACCAGTGCTTGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSVHCGGPSPMVLSFNIYSYPWF*HQCLCG Trigger: CCCACACAAGCACTGGTGGCAGAACCATGGATAGCT...GTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGACAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060067.12 |
||
| CDS-3UTR CCA 90 bp | TCCACTGTGGAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAAGGCAATGCTGCACTTTaGTTCCAGGCTCGTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: STVEGLHRWYCHLTFTQEGNAAL*FQARSP Trigger: AGGGGAACGAGCCTGGAACCAAAGTGCAGCATTGCC...TTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | GAAAGTGTTCTTCCTGTCTTACACGAGCTCCAGAGGACCTTTAACACAGAAGCTATAAAGAGGTCCGAGTaGATGTCTGCACCGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESVLPVLHELQRTFNTEAIKRSE*MSAPSL Trigger: GAGGGACGGTGCAGACATCCACTCGGACCTCTTTAT...AGCTTCTGTGTTAAAGGTCCTCTGGAGCTCGTGTAAGACAGGAAGAACACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | CACTTCACAACACTGCAGCTTAAAGCTTCATCTGAAGCTGTAAGCCGGGTCTTTAGGATCAGGTTCTGCTaGCTACTGCTCAGCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HFTTLQLKASSEAVSRVFRIRFC*LLLSLF Trigger: AAAGAGGCTGAGCAGTAGGCAGCAGAACCTGATCCT...AAAGACCCGGCTTACAGCTTCAGATGAAGCTTTAAGCTGCAGTGTTGTGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | TCCACTGTGGAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAACCACCAGTGCTTGTGTaGGTGACTCCATTAACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: STVEGLHRWYCHLTFTQEPPVLV*VTPLTV Trigger: GACGGTTAATGGAGTCACCCACACAAGCACTGGTGG...TTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060067.12 |
||
| CDS-3UTR TCA 90 bp | TCATCTGAAGCTGTAAGCCGGGTCTTTAATTCTTTCAGCTCTACTACATGCGATATCTTCTGGTCTGTCTaGATCCCTGCAGGGATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSEAVSRVFNSFSSTTCDIFWSV*IPAGIV Trigger: GACGATCCCTGCAGGGATTCAGACAGACCAGAAGAT...ATCGCATGTAGTAGAGCTGAAAGAATTAAAGACCCGGCTTACAGCTTCAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | AAAGCTTCATCTGAAGCTGTAAGCCGGGTCTTTAATTCTTTCAGCTCTACTACACTCAGGATCAGGTTCTaGTGCCTACTGCTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KASSEAVSRVFNSFSSTTLRIRF*CLLLSL Trigger: GAGGCTGAGCAGTAGGCAGCAGAACCTGATCCTGAG...TGTAGTAGAGCTGAAAGAATTAAAGACCCGGCTTACAGCTTCAGATGAAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | GAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAAAAGACAATGCCTCTCGCCTATCCTTaGTTCCTGCGGAGCTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLHRWYCHLTFTQEKTMPLAYP*FLRSYP Trigger: TGGATAGCTCCGCAGGAAGCAAGGATAGGCGAGAGG...CATTGTCTTTTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060067.12 |
||
| CDS-3UTR TCA 90 bp | AAAGCTTCATCTGAAGCTGTAAGCCGGGTCTTTAATTCTTTCAGCTCTACTACAATCTTCTGGTCTGTCTaGATCCCTGCAGGGATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KASSEAVSRVFNSFSSTTIFWSV*IPAGIV Trigger: GACGATCCCTGCAGGGATTCAGACAGACCAGAAGAT...TGTAGTAGAGCTGAAAGAATTAAAGACCCGGCTTACAGCTTCAGATGAAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | TCATCTGAAGCTGTAAGCCGGGTCTTTAATTCTTTCAGCTCTACTACATGCGATCACATCTCCGACATGTaGAACGCATCACAAAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSEAVSRVFNSFSSTTCDHISDM*NASQKA Trigger: GGCCTTTTGTGATGCGTTCCACATGTCGGAGATGTG...ATCGCATGTAGTAGAGCTGAAAGAATTAAAGACCCGGCTTACAGCTTCAGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | CACTTCACAACACTGCAGCTTAAAGCTTCATCTGAAGCTGTAAGCCGGGTCTTTACTGCTCAGCCTCTTTaGAACTCTGATCTTGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: HFTTLQLKASSEAVSRVFTAQPL*NSDLDV Trigger: CACATCAAGATCAGAGTTCCAAAGAGGCTGAGCAGT...AAAGACCCGGCTTACAGCTTCAGATGAAGCTTTAAGCTGCAGTGTTGTGAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR TCA 90 bp | AGAAAGGGAATTAATCACTTCACAACACTGCAGCTTAAAGCTTCATCTGAAGCTCCCCAAAGATCTTCCTaGACAACTCCTCGGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RKGINHFTTLQLKASSEAPQRSS*TTPRGQ Trigger: TTGACCCCGAGGAGTTGTTCAGGAAGATCTTTGGGG...AGCTTCAGATGAAGCTTTAAGCTGCAGTGTTGTGAAGTGATTAATTCCCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | TCATCTGAAGCTGTAAGCCGGGTCTTTAATTCTTTCAGCTCTACTACATGCGATTTCTCGTTTTCCCACTaGCATCCTTACAGTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSEAVSRVFNSFSSTTCDFSFSH*HPYSLT Trigger: GGTCAGACTGTAAGGATGCCAGTGGGAAAACGAGAA...ATCGCATGTAGTAGAGCTGAAAGAATTAAAGACCCGGCTTACAGCTTCAGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | GAAAGTGTTCTTCCTGTCTTACACGAGCTCCAGAGGACCTTTAACACAGAAGCTTTGTGTGGAAAGAGGTaGTACAAACAAAAGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ESVLPVLHELQRTFNTEALCGKR*YKQKGN Trigger: GTTTCCCTTTTGTTTGTACCACCTCTTTCCACACAA...AGCTTCTGTGTTAAAGGTCCTCTGGAGCTCGTGTAAGACAGGAAGAACACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | GAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAAAAGACAATGTTCTCGTTTTCCCACTaGCATCCTTACAGTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: EGLHRWYCHLTFTQEKTMFSFSH*HPYSLT Trigger: GGTCAGACTGTAAGGATGCCAGTGGGAAAACGAGAA...CATTGTCTTTTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGGAATTAATCACTTCACAACACTGCAGCTTAAAGCTTCATCTGAAGCTACCATCTTCAACTCCTaGAGGCACAGGAATTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKGINHFTTLQLKASSEATIFNS*RHRNCH Trigger: GTGACAATTCCTGTGCCTGCAGGAGTTGAAGATGGT...AGCTTCAGATGAAGCTTTAAGCTGCAGTGTTGTGAAGTGATTAATTCCCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR GCA 90 bp | AGAAAGGGAATTAATCACTTCACAACACTGCAGCTTAAAGCTTCATCTGAAGCTGTCTGTCTGAATCCCTaGAGGGATCGTCACATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKGINHFTTLQLKASSEAVCLNP*RDRHID Trigger: ATCAATGTGACGATCCCTGCAGGGATTCAGACAGAC...AGCTTCAGATGAAGCTTTAAGCTGCAGTGTTGTGAAGTGATTAATTCCCTTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CCA 90 bp | TCCACTGTGGAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAATTGTGTGGAAAGAGGTaGTACAAACAAAAGGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: STVEGLHRWYCHLTFTQELCGKR*YKQKGN Trigger: GTTTCCCTTTTGTTTGTACCACCTCTTTCCACACAA...TTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR TCA 90 bp | GAAAAGAAAGAAACTACAGAGAAAGTGTTCTTCCTGTCTTACACGAGCTCCAGAACCAAAAGGAGAAGATaGGAACTCCCCAAAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EKKETTEKVFFLSYTSSRTKRRR*ELPKDL Trigger: AAGATCTTTGGGGAGTTCTCATCTTCTCCTTTTGGT...TCTGGAGCTCGTGTAAGACAGGAAGAACACTTTCTCTGTAGTTTCTTTCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR TCA 90 bp | GAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAAAAGACAATGCCCCCAAGAATAGCTTaGGCTATTGAAATAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGLHRWYCHLTFTQEKTMPPRIA*AIEIKR Trigger: CCTCTTTATTTCAATAGCTCAAGCTATTCTTGGGGG...CATTGTCTTTTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR CCA 90 bp | AGAAAGGGAATTAATCACTTCACAACACTGCAGCTTAAAGCTTCATCTGAAGCTAAAGAAGCACTTGTGTaGAAAGAGGTGGTACAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RKGINHFTTLQLKASSEAKEALV*KEVVQT Trigger: TGTTTGTACCACCTCTTTCCACACAAGTGCTTCTTT...AGCTTCAGATGAAGCTTTAAGCTGCAGTGTTGTGAAGTGATTAATTCCCTTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS TCA 90 bp | GTGAGGCGGACACCGGGTCTCAATGTCAGCAGCGCCCGGGGGCCGTaGGCGCCCATGGAAAGCCCGAAGGCAGAGACGCACAGCTTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VRRTPGLNVSSARGP*APMESPKAETHSLR Trigger: TCGCAAGCTGTGCGTCTCTGCCTTCGGGCTTTCCATGGGCGCTCACGGCCCCCGGGCGCTGCTGACATTGAGACCCGGTGTCCGCCTCAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS CCA 90 bp | CACCGGGTCTCAATGTCAGCAGCGCCCGGGGGCCGTGAGCGCCCATaGAAAGCCCGAAGGCAGAGACGCACAGCTTGCGACACAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HRVSMSAAPGGRERP*KARRQRRTACDTGM Trigger: CATCCCTGTGTCGCAAGCTGTGCGTCTCTGCCTTCGGGCTTTCCATGGGCGCTCACGGCCCCCGGGCGCTGCTGACATTGAGACCCGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | GGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGCCAGGCTCGTTCCCCTaGCCGTCACAGCGCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GSVLPFWDPPVSDALATEPGSFP*PSQRSQ Trigger: CTGTGAGCGCTGTGACGGCAAGGGGAACGAGCCTGG...CTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR CAA 90 bp | GGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGACGCGCTTCTTCTGCTaGGCTTGTCCTGCTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GAGAQCCRSGILLCLMPWTRFFC*ACPAPL Trigger: CAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGT...CCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | GCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCATACAGGCCCTGGGCTTaGGCTGTGCCCCCAAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: AGAQCCRSGILLCLMPWPYRPWA*AVPPRI Trigger: TATTCTTGGGGGCACAGCCAAAGCCCAGGGCCTGTA...TGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | CCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCGCCTCTCGCCTATCCTaGCTTCCTGCGGAGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: PFWDPPVSDALATERSCCASRLS*LPAELS Trigger: GGATAGCTCCGCAGGAAGCAAGGATAGGCGAGAGGC...GCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | TCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCAACGCGCTTCTTCTGCTaGGCTTGTCCTGCTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGILLCLMPWPQRGAAAPTRFFC*ACPAPL Trigger: CAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGT...TGGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | CTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCCTGCAGGCACAGGAATaGTCACGCGCTTCTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGAGAQCCRSGILLCLMPLQAQE*SRASSA Trigger: AGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAG...GGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
||
| CDS-3UTR CAA 90 bp | AGGGATCTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGGAAAGGAATCCCTCATaGTCCTCCCCAGCCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RDLGAGAQCCRSGILLCLERNPS*SSPASR Trigger: GCGAGAGGCTGGGGAGGACAATGAGGGATTCCTTTC...CAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | AGGGATCTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGCTGCAGGCACAGGAATaGTCACGCGCTTCTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RDLGAGAQCCRSGILLCLLQAQE*SRASSA Trigger: AGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAG...CAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | TGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGAAAGGAATCCCTCATaGTCCTCCCCAGCCTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CRSGILLCLMPWPQRGAAERNPS*SSPASR Trigger: GCGAGAGGCTGGGGAGGACAATGAGGGATTCCTTTC...AGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | CATGCTACCAGCAGAGGCTGGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTGCCTCTCGCCTATCCTaGCTTCCTGCGGAGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: HATSRGWKGSCSVHCGGPASRLS*LPAELS Trigger: GGATAGCTCCGCAGGAAGCAAGGATAGGCGAGAGGC...AGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCCTCTGCTGGTAGCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060067.12 |
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| CDS GCA 90 bp | TGCAGGCACAGGAATTGTCACGCGCTTCTTCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACAGGGATTTGTGATGATGGAGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CRHRNCHALLLLGLS*SPADHTGICDDGAP Trigger: CGGGGCTCCATCATCACAAATCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | AGGGATCTGGGAGCAGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGTGGCCAAAGAAGCACTaGTGTGGAAAGAGGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RDLGAGAQCCRSGILLCLWPKKH*CGKRWY Trigger: GTACCACCTCTTTCCACACAAGTGCTTCTTTGGCCA...CAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCTGCTCCCAGATCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | TTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCTGGCCAAAGAAGCACTaGTGTGGAAAGAGGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FWDPPVSDALATERSCCSWPKKH*CGKRWY Trigger: GTACCACCTCTTTCCACACAAGTGCTTCTTTGGCCA...GGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGCCACAGAGAGGAGCTGCTGCTCCATTTAGTTTCCAGTTGACCGCTTTCTGGCAATGCTGCACTTaGGTTCCAGGCTCGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PWPQRGAAAPFSFQLTAFWQCCT*VPGSFP Trigger: GGGGAACGAGCCTGGAACCAAAGTGCAGCATTGCCA...GAAAGCGGTCAACTGGAAACTAAATGGAGCAGCAGCTCCTCTCTGTGGCCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060067.12 |
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| CDS TCA 90 bp | CAGGCCCTGGGCTTTGGCTGTGCCCCCAAGAATAGCTTGAGCTATTaGAATAAAGAGGTCCGAGTGGATGTCTGCACCGTCCCTCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QALGFGCAPKNSLSY*NKEVRVDVCTVPPE Trigger: TTCCGGAGGGACGGTGCAGACATCCACTCGGACCTCTTTATTTCAATAGCTCAAGCTATTCTTGGGGGCACAGCCAAAGCCCAGGGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS GCA 90 bp | CCATCTTCAACTCCTGCAGGCACAGGAATTGTCACGCGCTTCTTCTaGTTGGCTTGTCCTGCTCCCCTGCAGACCACACAGGGATTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSSTPAGTGIVTRFF*LACPAPLQTTQGFV Trigger: CACAAATCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAGGAGTTGAAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | GGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGTGGGAAAACTTCTCCTaGGCTTTGGGATCATCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GSVLPFWDPPVSDALATEWENFS*ALGSSL Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTTTCCCA...CTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | AGGGGCTCAGTGCTGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGSVLPFWDPPVSDALATNFSLA*GSSLFV Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...TGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCAGCACTGAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | CACTTCACAACACTGCAGCTTAAAGCTTCATCTGAAGCTGTAAGCCGGGTCTTTCCAGGCTCGTTCCCCTaGCCGTCACAGCGCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: HFTTLQLKASSEAVSRVFPGSFP*PSQRSQ Trigger: CTGTGAGCGCTGTGACGGCAAGGGGAACGAGCCTGG...AAAGACCCGGCTTACAGCTTCAGATGAAGCTTTAAGCTGCAGTGTTGTGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR CAA 90 bp | CCCACATACATCAGACTAGAACACTCTAAGTCCACTGCCAGGCAAGCTGCCATCTACAGGCCCTGGGCTTaGGCTGTGCCCCCAAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: PTYIRLEHSKSTARQAAIYRPWA*AVPPRI Trigger: TATTCTTGGGGGCACAGCCAAAGCCCAGGGCCTGTA...GATGGCAGCTTGCCTGGCAGTGGACTTAGAGTGTTCTAGTCTGATGTATGTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR CAA 90 bp | TGCCGTTCTGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CRSGILLCLMPWPQRGAANFSLA*GSSLFV Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...AGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCAGAACGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | TGGGATCCTCCTGTGTCTGATGCCCTGGCCACAGAGAGGAGCTGCTGCTCCATTTGGGAAAACTTCTCCTaGGCTTTGGGATCATCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: WDPPVSDALATERSCCSIWENFS*ALGSSL Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTTTCCCA...AATGGAGCAGCAGCTCCTCTCTGTGGCCAGGGCATCAGACACAGGAGGATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000229529.2 |
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| CDS GCA 90 bp | TCGTTTTCCCACTGGCATCCTTACAGTCTGACCATCTTCAACTCCTaGAGGCACAGGAATTGTCACGCGCTTCTTCTGCTTGGCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFSHWHPYSLTIFNS*RHRNCHALLLLGLS Trigger: GGACAAGCCAAGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAGGAGTTGAAGATGGTCAGACTGTAAGGATGCCAGTGGGAAAACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS TCA 90 bp | ATCCGGGGGATGCCTTTTCCAGTCAAACGAATCTTCTGGTCTGTCTaGATCCCTGCAGGGATCGTCACATTGATTGTCTCATACAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IRGMPFPVKRIFWSV*IPAGIVTLIVSYRP Trigger: GGGCCTGTATGAGACAATCAATGTGACGATCCCTGCAGGGATTCAGACAGACCAGAAGATTCGTTTGACTGGAAAAGGCATCCCCCGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | CACTTCACAACACTGCAGCTTAAAGCTTCATCTGAAGCTGTAAGCCGGGTCTTTTGGCAATGCTGCACTTaGGTTCCAGGCTCGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HFTTLQLKASSEAVSRVFWQCCT*VPGSFP Trigger: GGGGAACGAGCCTGGAACCAAAGTGCAGCATTGCCA...AAAGACCCGGCTTACAGCTTCAGATGAAGCTTTAAGCTGCAGTGTTGTGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR CAA 90 bp | TCATCTGAAGCTGTAAGCCGGGTCTTTAATTCTTTCAGCTCTACTACATGCGATACGCGCTTCTTCTGCTaGGCTTGTCCTGCTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSEAVSRVFNSFSSTTCDTRFFC*ACPAPL Trigger: CAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGT...ATCGCATGTAGTAGAGCTGAAAGAATTAAAGACCCGGCTTACAGCTTCAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR CAA 90 bp | TCCACTGTGGAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAATACAGGCCCTGGGCTTaGGCTGTGCCCCCAAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: STVEGLHRWYCHLTFTQEYRPWA*AVPPRI Trigger: TATTCTTGGGGGCACAGCCAAAGCCCAGGGCCTGTA...TTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR CAA 90 bp | TACCAGCAGAGGCTGGAAAGGAAGTTGCTCTGTCCACTGTGGAGGGCCTTCACCTGGGATCATCCTTATTaGTGTCTGGATGATATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YQQRLERKLLCPLWRAFTWDHPY*CLDDIS Trigger: AGAAATATCATCCAGACACAAATAAGGATGATCCCA...GGTGAAGGCCCTCCACAGTGGACAGAGCAACTTCCTTTCCAGCCTCTGCTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS-3UTR CAA 90 bp | GAAAGTGTTCTTCCTGTCTTACACGAGCTCCAGAGGACCTTTAACACAGAAGCTTGGCCAAAGAAGCACTaGTGTGGAAAGAGGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ESVLPVLHELQRTFNTEAWPKKH*CGKRWY Trigger: GTACCACCTCTTTCCACACAAGTGCTTCTTTGGCCA...AGCTTCTGTGTTAAAGGTCCTCTGGAGCTCGTGTAAGACAGGAAGAACACTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS TCA 90 bp | AATGTGACAAAAATTTCTCGTTTTCCCACTGGCATCCTTACAGTCTaGCCATCTTCAACTCCTGCAGGCACAGGAATTGTCACGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NVTKISRFPTGILTV*PSSTPAGTGIVTRF Trigger: GAAGCGCGTGACAATTCCTGTGCCTGCAGGAGTTGAAGATGGTCAGACTGTAAGGATGCCAGTGGGAAAACGAGAAATTTTTGTCACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS-3UTR CAA 90 bp | GAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAAAAGACAATGCTGCAGGCACAGGAATaGTCACGCGCTTCTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EGLHRWYCHLTFTQEKTMLQAQE*SRASSA Trigger: AGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAG...CATTGTCTTTTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CAA 90 bp | CACTTCACAACACTGCAGCTTAAAGCTTCATCTGAAGCTGTAAGCCGGGTCTTTAACTTCTCCTTGGCTTaGGGATCATCCTTATTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HFTTLQLKASSEAVSRVFNFSLA*GSSLFV Trigger: CACAAATAAGGATGATCCCAAAGCCAAGGAGAAGTT...AAAGACCCGGCTTACAGCTTCAGATGAAGCTTTAAGCTGCAGTGTTGTGAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CAA 90 bp | TCCACTGTGGAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAATGGGAAAACTTCTCCTaGGCTTTGGGATCATCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: STVEGLHRWYCHLTFTQEWENFS*ALGSSL Trigger: TAAGGATGATCCCAAAGCCAAGGAGAAGTTTTCCCA...TTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTCCACAGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CAA 90 bp | GAGGGCCTTCACCGATGGTATTGTCATTTAACATTTACACAGGAAAAGACAATGGACACCCTTGGCAGCTaGATTGAATGTCAATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EGLHRWYCHLTFTQEKTMDTLGS*IECQFH Trigger: ATGGAATTGACATTCAATCAAGCTGCCAAGGGTGTC...CATTGTCTTTTCCTGTGTAAATGTTAAATGACAATACCATCGGTGAAGGCCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CAA 90 bp | GAAAAGAAAGAAACTACAGAGAAAGTGTTCTTCCTGTCTTACACGAGCTCCAGAGACACCCTTGGCAGCTaGATTGAATGTCAATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EKKETTEKVFFLSYTSSRDTLGS*IECQFH Trigger: ATGGAATTGACATTCAATCAAGCTGCCAAGGGTGTC...TCTGGAGCTCGTGTAAGACAGGAAGAACACTTTCTCTGTAGTTTCTTTCTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS-3UTR CAA 90 bp | AAAGCTTCATCTGAAGCTGTAAGCCGGGTCTTTAATTCTTTCAGCTCTACTACATGGGATCATCCTTATTaGTGTCTGGATGATATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KASSEAVSRVFNSFSSTTWDHPY*CLDDIS Trigger: AGAAATATCATCCAGACACAAATAAGGATGATCCCA...TGTAGTAGAGCTGAAAGAATTAAAGACCCGGCTTACAGCTTCAGATGAAGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
||
| CDS TCA 72 bp | ACACCGGGTCTCAATGTCAGCAGCGCCCGGGGGCCGTaGGCGCCCATGGAAAGCCCGAAGGCAGAGACGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TPGLNVSSARGP*APMESPKAETH Trigger: GTGCGTCTCTGCCTTCGGGCTTTCCATGGGCGCTCACGGCCCCCGGGCGCTGCTGACATTGAGACCCGGTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS CCA 72 bp | TCAATGTCAGCAGCGCCCGGGGGCCGTGAGCGCCCATaGAAAGCCCGAAGGCAGAGACGCACAGCTTGCGAC | + |
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Preference number: 6 (lower is better) Translates to: SMSAAPGGRERP*KARRQRRTACD Trigger: GTCGCAAGCTGTGCGTCTCTGCCTTCGGGCTTTCCATGGGCGCTCACGGCCCCCGGGCGCTGCTGACATTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS CAA 72 bp | CCTGCAGGCACAGGAATTGTCACGCGCTTCTTCTGCTaGGCTTGTCCTGCTCCCCTGCAGACCACACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PAGTGIVTRFFC*ACPAPLQTTQG Trigger: TCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS GCA 72 bp | ACTCCTGCAGGCACAGGAATTGTCACGCGCTTCTTCTaGTTGGCTTGTCCTGCTCCCCTGCAGACCACACAG | + |
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Preference number: 6 (lower is better) Translates to: TPAGTGIVTRFF*LACPAPLQTTQ Trigger: CTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS CAA 90 bp | AACTCCTGCAGGCACAGGAATTGTCACGCGCTTCTTCTGCTTGGCTaGTCCTGCTCCCCTGCAGACCACACAGGGATTTGTGATGATGGA | + |
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Preference number: 6 (lower is better) Translates to: NSCRHRNCHALLLLG*SCSPADHTGICDDG Trigger: TCCATCATCACAAATCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAGGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS CAA 90 bp | TCTTCAACTCCTGCAGGCACAGGAATTGTCACGCGCTTCTTCTGCTaGGCTTGTCCTGCTCCCCTGCAGACCACACAGGGATTTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: SSTPAGTGIVTRFFC*ACPAPLQTTQGFVM Trigger: CATCACAAATCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAGGAGTTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS CAA 90 bp | GCATCCTTACAGTCTGACCATCTTCAACTCCTGCAGGCACAGGAATaGTCACGCGCTTCTTCTGCTTGGCTTGTCCTGCTCCCCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ASLQSDHLQLLQAQE*SRASSAWLVLLPCR Trigger: TCTGCAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAGGAGTTGAAGATGGTCAGACTGTAAGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS TCA 72 bp | TCTGGTCTGTCTGAATCCCTGCAGGGATCGTCACATTaGTTGTCTCATACAGGCCCTGGGCTTTGGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SGLSESLQGSSH*LSHTGPGLWLC Trigger: GCACAGCCAAAGCCCAGGGCCTGTATGAGACAATCAATGTGACGATCCCTGCAGGGATTCAGACAGACCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS CAA 72 bp | TGGCAATGCTGCACTTTGGTTCCAGGCTCGTTCCCCTaGCCGTCACAGCGCTCACAGGTATCCATAATGTTC | + |
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Preference number: 6 (lower is better) Translates to: WQCCTLVPGSFP*PSQRSQVSIMF Trigger: GAACATTATGGATACCTGTGAGCGCTGTGACGGCAAGGGGAACGAGCCTGGAACCAAAGTGCAGCATTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS CAA 72 bp | CAGTCTGACCATCTTCAACTCCTGCAGGCACAGGAATaGTCACGCGCTTCTTCTGCTTGGCTTGTCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: QSDHLQLLQAQE*SRASSAWLVLL Trigger: GAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGACAATTCCTGTGCCTGCAGGAGTTGAAGATGGTCAGACTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS TCA 72 bp | AGGTGGTACAAACAAAAGGGAAACTTTTTGTTCCTGTaGGGCGGACACCGGGTCTCAATGTCAGCAGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RWYKQKGNFLFL*GGHRVSMSAAP Trigger: GGGCGCTGCTGACATTGAGACCCGGTGTCCGCCTCACAGGAACAAAAAGTTTCCCTTTTGTTTGTACCACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS GCA 72 bp | AGGAATTGTCACGCGCTTCTTCTGCTTGGCTTGTCCTaGTCCCCTGCAGACCACACAGGGATTTGTGATGAT | + |
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Preference number: 6 (lower is better) Translates to: RNCHALLLLGLS*SPADHTGICDD Trigger: ATCATCACAAATCCCTGTGTGGTCTGCAGGGGAGCAGGACAAGCCAAGCAGAAGAAGCGCGTGACAATTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS TCA 72 bp | GGCTTTGGCTGTGCCCCCAAGAATAGCTTGAGCTATTaGAATAAAGAGGTCCGAGTGGATGTCTGCACCGTC | + |
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Preference number: 6 (lower is better) Translates to: GFGCAPKNSLSY*NKEVRVDVCTV Trigger: GACGGTGCAGACATCCACTCGGACCTCTTTATTTCAATAGCTCAAGCTATTCTTGGGGGCACAGCCAAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS CCA 72 bp | CAGGATCAGGTTCTGCTGCCTACTGCTCAGCCTCTTTaGAACTCTGATCTTGATGTGAATGTAGTGGTCACC | + |
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Preference number: 6 (lower is better) Translates to: QDQVLLPTAQPL*NSDLDVNVVVT Trigger: GGTGACCACTACATTCACATCAAGATCAGAGTTCCAAAGAGGCTGAGCAGTAGGCAGCAGAACCTGATCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS GCA 72 bp | TCCAGTCAAACGAATCTTCTGGTCTGTCTGAATCCCTaGAGGGATCGTCACATTGATTGTCTCATACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSQTNLLVCLNP*RDRHIDCLIQA Trigger: GGCCTGTATGAGACAATCAATGTGACGATCCCTGCAGGGATTCAGACAGACCAGAAGATTCGTTTGACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS TCA 72 bp | AAAATTTCTCGTTTTCCCACTGGCATCCTTACAGTCTaGCCATCTTCAACTCCTGCAGGCACAGGAATTGTC | + |
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Preference number: 6 (lower is better) Translates to: KISRFPTGILTV*PSSTPAGTGIV Trigger: GACAATTCCTGTGCCTGCAGGAGTTGAAGATGGTCAGACTGTAAGGATGCCAGTGGGAAAACGAGAAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS TCA 72 bp | ATGCCTTTTCCAGTCAAACGAATCTTCTGGTCTGTCTaGATCCCTGCAGGGATCGTCACATTGATTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: MPFPVKRIFWSV*IPAGIVTLIVS Trigger: TGAGACAATCAATGTGACGATCCCTGCAGGGATTCAGACAGACCAGAAGATTCGTTTGACTGGAAAAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS TCA 72 bp | GATGATATTTCTTGGCAAGCTGATAATAGGCTTTCTTaGTATCTTTCTGGCTGGCATTTCGGGGCACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: DDISWQADNRLS*YLSGWHFGALP Trigger: TGGGAGTGCCCCGAAATGCCAGCCAGAAAGATATCAAGAAAGCCTATTATCAGCTTGCCAAGAAATATCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 ENSMUST00000229529.2 |
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| CDS CAA 72 bp | GTTCACAGTGAACTCTTTGTTGACACCCTTGGCAGCTaGATTGAATGTCAATTCCATGATGTATTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: VHSELFVDTLGS*IECQFHDVFLR Trigger: CCTCAGGAATACATCATGGAATTGACATTCAATCAAGCTGCCAAGGGTGTCAACAAAGAGTTCACTGTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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| CDS CAA 90 bp | ATCCATAATGTTCACAGTGAACTCTTTGTTGACACCCTTGGCAGCTaGATTGAATGTCAATTCCATGATGTATTCCTGAGGCTGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: IHNVHSELFVDTLGS*IECQFHDVFLRLIK Trigger: TTTGATCAGCCTCAGGAATACATCATGGAATTGACATTCAATCAAGCTGCCAAGGGTGTCAACAAAGAGTTCACTGTGAACATTATGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060067.12 ENSMUST00000115854.4 |
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