Pregenerated sensors for DNAI4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035126Ensembl transcript IDs: ENSMUST00000036451.15, ENSMUST00000036557.15, ENSMUST00000106868.4, ENSMUST00000116316.10, ENSMUST00000148673.2
Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAAAGGCTTGACGGTATCCTGGTGCCAGATCATAACACCCCAATCTaGAGAACAGCTCAAGAAGACATCGGGACAGAATGGGTTCCATGT | + |
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Preference number: 1 (lower is better) Translates to: KRLDGILVPDHNTPI*RTAQEDIGTEWVPC Trigger: ACATGGAACCCATTCTGTCCCGATGTCTTCTTGAGCTGTTCTGCAGATTGGGGTGTTATGATCTGGCACCAGGATACCGTCAAGCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR TCA 90 bp | AGTCTGGCCTCAATGCATTTGACTCTGCAGATGACTCTGGTCCTTTaGGAGGAAGCTAGCAATGCATTTCGGATTATTGTTCCCCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SLASMHLTLQMTLVL*EEASNAFRIIVPLL Trigger: CAGCAGGGGAACAATAATCCGAAATGCATTGCTAGCTTCCTCTCAAAGGACCAGAGTCATCTGCAGAGTCAAATGCATTGAGGCCAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR TCA 90 bp | CTGCAGAACAGCTCAAGAAGACATCGGGACAGAATGGGTTCCATGTaGCTTTATACACTGGACCCTTATGTCCTCTATAGGTCTCTAGGT | + |
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Preference number: 1 (lower is better) Translates to: LQNSSRRHRDRMGSM*LYTLDPYVLYRSLG Trigger: ACCTAGAGACCTATAGAGGACATAAGGGTCCAGTGTATAAAGTCACATGGAACCCATTCTGTCCCGATGTCTTCTTGAGCTGTTCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR GCA 90 bp | ATGGAGACCATGAAGCAATGGCTATGCGTAGTAGGTAGTTCTCACTaGCCTGTGGACTCTTATCACCACCATAGACACAAAAGATCTCCA | + |
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Preference number: 1 (lower is better) Translates to: METMKQWLCVVGSSH*PVDSYHHHRHKRSP Trigger: TGGAGATCTTTTGTGTCTATGGTGGTGATAAGAGTCCACAGGGCAGTGAGAACTACCTACTACGCATAGCCATTGCTTCATGGTCTCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR GCA 90 bp | CTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATaGGTAGTAGGTAGTTCTCACTGCCCTGTGGACTCTTATCACCAC | + |
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Preference number: 1 (lower is better) Translates to: LTHSSKEMETMKQWL*VVGSSHCPVDSYHH Trigger: GTGGTGATAAGAGTCCACAGGGCAGTGAGAACTACCTACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR CCA 90 bp | AACACCCCAATCTGCAGAACAGCTCAAGAAGACATCGGGACAGAATaGGTTCCATGTGACTTTATACACTGGACCCTTATGTCCTCTATA | + |
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Preference number: 1 (lower is better) Translates to: NTPICRTAQEDIGTE*VPCDFIHWTLMSSI Trigger: TATAGAGGACATAAGGGTCCAGTGTATAAAGTCACATGGAACCCATTCTGTCCCGATGTCTTCTTGAGCTGTTCTGCAGATTGGGGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR GCA 90 bp | CAAAGTGCTGATCTGAAGGTCCCAAATCTCTACTCTATTCTCATTTaGAGCGGCAAAAATATATGCGGATTTGGGGGACCAGGAAACATC | + |
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Preference number: 1 (lower is better) Translates to: QSADLKVPNLYSILI*SGKNICGFGGPGNI Trigger: GATGTTTCCTGGTCCCCCAAATCCGCATATATTTTTGCCGCTGCAAATGAGAATAGAGTAGAGATTTGGGACCTTCAGATCAGCACTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR GCA 90 bp | GTCCCAAATCTCTACTCTATTCTCATTTGCAGCGGCAAAAATATATaGGGATTTGGGGGACCAGGAAACATCATAAACAACGTAAGTTGT | + |
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Preference number: 1 (lower is better) Translates to: VPNLYSILICSGKNI*GFGGPGNIINNVSC Trigger: ACAACTTACGTTGTTTATGATGTTTCCTGGTCCCCCAAATCCGCATATATTTTTGCCGCTGCAAATGAGAATAGAGTAGAGATTTGGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR CCA 90 bp | TCTCTACTCTATTCTCATTTGCAGCGGCAAAAATATATGCGGATTTaGGGGACCAGGAAACATCATAAACAACGTAAGTTGTTGGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: SLLYSHLQRQKYMRI*GTRKHHKQRKLLGK Trigger: TTTACCCAACAACTTACGTTGTTTATGATGTTTCCTGGTCCCCCAAATCCGCATATATTTTTGCCGCTGCAAATGAGAATAGAGTAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR-3UTR TCA 90 bp | CTAGTTAGGGTGACCCACATGGATAACCCCTTCCAAGTCTGTGTGGGTGTGTGTGTTCTGAGTCCCGTGTaGGTGCTCACTGTGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: LVRVTHMDNPFQVCVGVCVLSPV*VLTVLP Trigger: GGGGAGCACAGTGAGCACTCACACGGGACTCAGAAC...ACACACACCCACACAGACTTGGAAGGGGTTATCCATGTGGGTCACCCTAACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR GCA 90 bp | CTAGTTAGGGTGACCCACATGGATAACCCCTTCCAAGTCTGTGTGGGTGTGTGTTGTGAGTGCTCACTGTaGTCCCCGAGGTGGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LVRVTHMDNPFQVCVGVCCECSL*SPRWQC Trigger: GCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA...ACACACACCCACACAGACTTGGAAGGGGTTATCCATGTGGGTCACCCTAACTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR GCA 90 bp | ACACACCCTGGCTTCTTTCCTCCACTCAAAACACCTTACAGAAAAGGCTGTCACTGTGAGTGCTCACTGTaGTCCCCGAGGTGGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: THPGFFPPLKTPYRKGCHCECSL*SPRWQC Trigger: GCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA...GTGACAGCCTTTTCTGTAAGGTGTTTTGAGTGGAGGAAAGAAGCCAGGGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCTTGGGAAGTTAGTTTaGCACTGTTGGAATTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: CECSLCSPRWQCSWKPPKLGKLV*HCWNCV Trigger: AACACAATTCCAACAGTGTCAAACTAACTTCCCAAG...CTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR GCA 90 bp | GTGACTTACGCCAGCAGAAAATATCTAATCTTTATGACCTGGCCTAAACCCAAGTGTGAGTGCTCACTGTaGTCCCCGAGGTGGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: VTYASRKYLIFMTWPKPKCECSL*SPRWQC Trigger: GCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA...CTTGGGTTTAGGCCAGGTCATAAAGATTAGATATTTTCTGCTGGCGTAAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTGAGGGTCCAAAGTGCTaGTCTGAAGGTCCCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: SCSLPIGGTKFCSFRLRFEGPKC*SEGPKS Trigger: AGATTTGGGACCTTCAGATCAGCACTTTGGACCCTC...AAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTGAGAGGACCTCCGTGAATTCAAGGCCAGTTGGTTCCAGGCCCTATCTCAAACAAACACAAAACTaGATCCAGGACAGTGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LSERTSVNSRPVGSRPYLKQTQN*IQDSVN Trigger: GTTCACACTGTCCTGGATTCAGTTTTGTGTTTGTTT...GAGATAGGGCCTGGAACCAACTGGCCTTGAATTCACGGAGGTCCTCTCACTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
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| 3UTR-3UTR CCA 90 bp | CCACCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGCCCCAAAGCCAAGCTTaGGAAGTTAGTTTGACACTG | + |
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Preference number: 2 (lower is better) Translates to: PPLLPSLCLDYFRKHPDLPQSQA*EVSLTL Trigger: CAGTGTCAAACTAACTTCCCAAGCTTGGCTTTGGGG...CAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR CCA 90 bp | CAATGGCTATGCGTAGTAGGTAGTTCTCACTGCCCTGTGGACTCTTATCACCACCCCCAAAGCCAAGCTTaGGAAGTTAGTTTGACACTG | + |
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Preference number: 2 (lower is better) Translates to: QWLCVVGSSHCPVDSYHHPQSQA*EVSLTL Trigger: CAGTGTCAAACTAACTTCCCAAGCTTGGCTTTGGGG...GTGGTGATAAGAGTCCACAGGGCAGTGAGAACTACCTACTACGCATAGCCATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR CAA 90 bp | GCAACCTGGCCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTaGGCAAACAGAACGGTTGTAAACTTGATTCCAGGGTTAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: ATWPSLSPTRRQSVS*ANRTVVNLIPGLAT Trigger: TGTTGCTAACCCTGGAATCAAGTTTACAACCGTTCTGTTTGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGGCCAGGTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
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| 3UTR-3UTR CCA 90 bp | ATGACCTGGCCTAAACCCAAGAGCCAGCTAAAATCGCCTTGCTTTTGTCTAACAACAGATCATCCTGTGTaGTTTGTCTTGGGCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: MTWPKPKSQLKSPCFCLTTDHPV*FVLGPS Trigger: GCTTGGGCCCAAGACAAACCACACAGGATGATCTGT...TGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGGCCAGGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
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| 3UTR-3UTR CCA 90 bp | CCTAAACCCAAGAGCCAGCTAAAATCGCCTTGCTTTTGTCTAACACATAGCTCCACAGATCATCCTGTGTaGTTTGTCTTGGGCCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: PKPKSQLKSPCFCLTHSSTDHPV*FVLGPS Trigger: GCTTGGGCCCAAGACAAACCACACAGGATGATCTGT...GGAGCTATGTGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
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| 3UTR CAA 90 bp | ACTAGAAGGCAATCTGTCTCTTTGGCAAACAGAACGGTTGTAAACTaGATTCCAGGGTTAGCAACATTCACGATCAGAGGGTCCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: TRRQSVSLANRTVVN*IPGLATFTIRGSKV Trigger: CACTTTGGACCCTCTGATCGTGAATGTTGCTAACCCTGGAATCAAGTTTACAACCGTTCTGTTTGCCAAAGAGACAGATTGCCTTCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR-3UTR TCA 90 bp | ATATCTGTTGTTCTGTCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTAGAATGGGTTCCATGTaGCTTTATACACTGGACCCT | + |
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Preference number: 2 (lower is better) Translates to: ISVVLSCSLPIGGTKFCSRMGSM*LYTLDP Trigger: AGGGTCCAGTGTATAAAGTCACATGGAACCCATTCT...ACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGACAGAACAACAGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR-3UTR GCA 90 bp | GTCTCTTTGGCAAACAGAACGGTTGTAAACTTGATTCCAGGGTTAGCAACATTCAGCGGCAAAAATATATaGGGATTTGGGGGACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSLANRTVVNLIPGLATFSGKNI*GFGGPG Trigger: TCCTGGTCCCCCAAATCCGCATATATTTTTGCCGCT...GAATGTTGCTAACCCTGGAATCAAGTTTACAACCGTTCTGTTTGCCAAAGAGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAATCTCTACTCTATTCTCATTTGCAGCGGCAAAAATATATGCGGATTTGGGCTTGACGGTATCCTaGTGCCAGATCATAACACCC | + |
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Preference number: 2 (lower is better) Translates to: SQISTLFSFAAAKIYADLGLTVS*CQIITP Trigger: GGGTGTTATGATCTGGCACCAGGATACCGTCAAGCC...CAAATCCGCATATATTTTTGCCGCTGCAAATGAGAATAGAGTAGAGATTTGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR CAA 90 bp | ACTAGAAGGCAATCTGTCTCTTTGGCAAACAGAACGGTTGTAAACTaGATTCCAGGGTTAGCAACATTCACGATCAGAGGGTCCAAACTT | + |
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Preference number: 2 (lower is better) Translates to: TRRQSVSLANRTVVN*IPGLATFTIRGSKL Trigger: AAGTTTGGACCCTCTGATCGTGAATGTTGCTAACCCTGGAATCAAGTTTACAACCGTTCTGTTTGCCAAAGAGACAGATTGCCTTCTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116316.10 |
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| 3UTR-3UTR TCA 90 bp | TTACACACCCTGGCTTCTTTCCTCCACTCAAAACACCTTACAGAAAAGGCTGTCCTTGGGAAGTTAGTTTaGCACTGTTGGAATTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: LHTLASFLHSKHLTEKAVLGKLV*HCWNCV Trigger: AACACAATTCCAACAGTGTCAAACTAACTTCCCAAG...GACAGCCTTTTCTGTAAGGTGTTTTGAGTGGAGGAAAGAAGCCAGGGTGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR TCA 90 bp | TCTCACTGCCCTGTGGACTCTTATCACCACCATAGACACAAAAGATCTCCAAATGCTAGCCAGCATATGTaGTGCTTATATCTGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SHCPVDSYHHHRHKRSPNASQHM*CLYLLF Trigger: GAACAACAGATATAAGCATCACATATGCTGGCTAGC...ATTTGGAGATCTTTTGTGTCTATGGTGGTGATAAGAGTCCACAGGGCAGTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR TCA 90 bp | CATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATGCGTAGTAGGTAGTGCTAGCCAGCATATGTaGTGCTTATATCTGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: HSSKEMETMKQWLCVVGSASQHM*CLYLLF Trigger: GAACAACAGATATAAGCATCACATATGCTGGCTAGC...ACTACCTACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR TCA 90 bp | ATATCTGTTGTTCTGTCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTCTTGGGAAGTTAGTTTaGCACTGTTGGAATTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: ISVVLSCSLPIGGTKFCSLGKLV*HCWNCV Trigger: AACACAATTCCAACAGTGTCAAACTAACTTCCCAAG...ACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGACAGAACAACAGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTCTCATAACACCCCAATCTaGAGAACAGCTCAAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: FRKHPDLVCMSETFCFLSHNTPI*RTAQED Trigger: GTCTTCTTGAGCTGTTCTGCAGATTGGGGTGTTATG...AGAAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR TCA 72 bp | TTCAGGCTCAGGTTTAAGTGGGGAGCACTGATGTTCTaGGTCCCGTGTGAGTGCTCACTGTGCTCCCCGAGG | + |
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Preference number: 3 (lower is better) Translates to: FRLRFKWGALMF*VPCECSLCSPR Trigger: CCTCGGGGAGCACAGTGAGCACTCACACGGGACTCAGAACATCAGTGCTCCCCACTTAAACCTGAGCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR CAA 90 bp | GAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGAACGGTTGTAAACTaGATTCCAGGGTTAGCAACA | + |
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Preference number: 3 (lower is better) Translates to: ECSLCSPRWQCSWKPPKPRTVVN*IPGLAT Trigger: TGTTGCTAACCCTGGAATCAAGTTTACAACCGTTCT...TGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
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| 3UTR-3UTR CAA 90 bp | CCACCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGGAGGTGGCAGTGCAGTaGGAAGCCCCCAAAGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: PPLLPSLCLDYFRKHPDLEVAVQ*EAPKAK Trigger: CTTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTC...CAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR CAA 90 bp | TGTGAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGTTGACACTGTTGGAATaGTGTTTTCTAATGACTGTG | + |
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Preference number: 3 (lower is better) Translates to: CECSLCSPRWQCSWKPPKLTLLE*CFLMTV Trigger: CACAGTCATTAGAAAACACAATTCCAACAGTGTCAA...CTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR CAA 90 bp | CTCACTGCCCTGTGGACTCTTATCACCACCATAGACACAAAAGATCTCCAAATTGAGGTGGCAGTGCAGTaGGAAGCCCCCAAAGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: LTALWTLITTIDTKDLQIEVAVQ*EAPKAK Trigger: CTTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTC...AATTTGGAGATCTTTTGTGTCTATGGTGGTGATAAGAGTCCACAGGGCAGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR-3UTR CAA 90 bp | CTAGTTAGGGTGACCCACATGGATAACCCCTTCCAAGTCTGTGTGGGTGTGTGTCTGGCCTCAATGCATTaGACTCTGCAGATGACTCTG | + |
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Preference number: 3 (lower is better) Translates to: LVRVTHMDNPFQVCVGVCLASMH*TLQMTL Trigger: CAGAGTCATCTGCAGAGTCAAATGCATTGAGGCCAG...ACACACACCCACACAGACTTGGAAGGGGTTATCCATGTGGGTCACCCTAACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR TCA 72 bp | TCTGTAGTTTCAGGCTCAGGTTTAAGTGGGGAGCACTaGTGTTCTGAGTCCCGTGTGAGTGCTCACTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: SVVSGSGLSGEH*CSESRVSAHCA Trigger: AGCACAGTGAGCACTCACACGGGACTCAGAACATCAGTGCTCCCCACTTAAACCTGAGCCTGAAACTACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR GCA 72 bp | GACGGTATCCTGGTGCCAGATCATAACACCCCAATCTaGAGAACAGCTCAAGAAGACATCGGGACAGAATGG | + |
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Preference number: 3 (lower is better) Translates to: DGILVPDHNTPI*RTAQEDIGTEW Trigger: CCATTCTGTCCCGATGTCTTCTTGAGCTGTTCTGCAGATTGGGGTGTTATGATCTGGCACCAGGATACCGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
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| 3UTR-3UTR CAA 90 bp | CTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATGCGTAGTAGAGGTGGCAGTGCAGTaGGAAGCCCCCAAAGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: LTHSSKEMETMKQWLCVVEVAVQ*EAPKAK Trigger: CTTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTC...TACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR CCA 72 bp | GGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCTTaGGAAGTTAGTTTGACACTGTTGGAATTGTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: GGSAVGSPQSQA*EVSLTLLELCF Trigger: AAAACACAATTCCAACAGTGTCAAACTAACTTCCCAAGCTTGGCTTTGGGGGCTTCCAACTGCACTGCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR CCA 72 bp | GAACAAAGCGTAAGGAGAGTGACAGATCATCCTGTGTaGTTTGTCTTGGGCCCAAGCAGAATGTTGATTACG | + |
|
Preference number: 3 (lower is better) Translates to: EQSVRRVTDHPV*FVLGPSRMLIT Trigger: CGTAATCAACATTCTGCTTGGGCCCAAGACAAACCACACAGGATGATCTGTCACTCTCCTTACGCTTTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| 3UTR CCA 72 bp | ACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATaGCTATGCGTAGTAGGTAGTTCTCACTGCCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: THSSKEMETMKQ*LCVVGSSHCPV Trigger: CACAGGGCAGTGAGAACTACCTACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCCCTTTCCGTTAGAGAAGAACAAAGCGTAAGGAGAGTGACAGATCATCCTAGGCAATCTGTCTCTTaGGCAAACAGAACGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: WSLSVREEQSVRRVTDHPRQSVS*ANRTVV Trigger: TACAACCGTTCTGTTTGCCAAAGAGACAGATTGCCT...AGGATGATCTGTCACTCTCCTTACGCTTTGTTCTTCTCTAACGGAAAGGGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| 3UTR-3UTR CAA 90 bp | CTAGTTAGGGTGACCCACATGGATAACCCCTTCCAAGTCTGTGTGGGTGTGTGTTTGACACTGTTGGAATaGTGTTTTCTAATGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LVRVTHMDNPFQVCVGVCLTLLE*CFLMTV Trigger: CACAGTCATTAGAAAACACAATTCCAACAGTGTCAA...ACACACACCCACACAGACTTGGAAGGGGTTATCCATGTGGGTCACCCTAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| 3UTR TCA 72 bp | AGCTCAAGAAGACATCGGGACAGAATGGGTTCCATGTaGCTTTATACACTGGACCCTTATGTCCTCTATAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSRRHRDRMGSM*LYTLDPYVLYR Trigger: CCTATAGAGGACATAAGGGTCCAGTGTATAAAGTCACATGGAACCCATTCTGTCCCGATGTCTTCTTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| 3UTR GCA 72 bp | ACCTGGCCTAAACCCAAGAGCCAGCTAAAATCGCCTTaGTTTTGTCTAACACATAGCTCCAAAGAAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TWPKPKSQLKSP*FCLTHSSKEME Trigger: CTCCATTTCTTTGGAGCTATGTGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGGCCAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| 3UTR CCA 72 bp | ATCTGCAGAACAGCTCAAGAAGACATCGGGACAGAATaGGTTCCATGTGACTTTATACACTGGACCCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: ICRTAQEDIGTE*VPCDFIHWTLM Trigger: CATAAGGGTCCAGTGTATAAAGTCACATGGAACCCATTCTGTCCCGATGTCTTCTTGAGCTGTTCTGCAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| 3UTR GCA 72 bp | GATCTGAAGGTCCCAAATCTCTACTCTATTCTCATTTaGAGCGGCAAAAATATATGCGGATTTGGGGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: DLKVPNLYSILI*SGKNICGFGGP Trigger: TGGTCCCCCAAATCCGCATATATTTTTGCCGCTGCAAATGAGAATAGAGTAGAGATTTGGGACCTTCAGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTTGTCTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTAAGGCAATCTGTCTCTTaGGCAAACAGAACGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: CFCLTHSSKEMETMKQWLRQSVS*ANRTVV Trigger: TACAACCGTTCTGTTTGCCAAAGAGACAGATTGCCT...TAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAGACAAAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| 3UTR GCA 72 bp | CTCTACTCTATTCTCATTTGCAGCGGCAAAAATATATaGGGATTTGGGGGACCAGGAAACATCATAAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: LYSILICSGKNI*GFGGPGNIINN Trigger: GTTGTTTATGATGTTTCCTGGTCCCCCAAATCCGCATATATTTTTGCCGCTGCAAATGAGAATAGAGTAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTAAAATATATGCGGATTaGGGGGACCAGGAAACATCA | + |
|
Preference number: 3 (lower is better) Translates to: TLENTLTWSVCLRPSVFFKIYAD*GDQETS Trigger: TGATGTTTCCTGGTCCCCCAAATCCGCATATATTTT...AAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGGGAAGTTAGTTTGACACTGTTGGAATTGTGTTTTCTAATGACTGTGTCTAGGCAATCTGTCTCTTaGGCAAACAGAACGGTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: AWEVSLTLLELCFLMTVSRQSVS*ANRTVV Trigger: TACAACCGTTCTGTTTGCCAAAGAGACAGATTGCCT...AGACACAGTCATTAGAAAACACAATTCCAACAGTGTCAAACTAACTTCCCAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| 3UTR CCA 72 bp | TATTCTCATTTGCAGCGGCAAAAATATATGCGGATTTaGGGGACCAGGAAACATCATAAACAACGTAAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: YSHLQRQKYMRI*GTRKHHKQRKL Trigger: CAACTTACGTTGTTTATGATGTTTCCTGGTCCCCCAAATCCGCATATATTTTTGCCGCTGCAAATGAGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTTGTCTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATTGACACTGTTGGAATaGTGTTTTCTAATGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CFCLTHSSKEMETMKQWLLTLLE*CFLMTV Trigger: CACAGTCATTAGAAAACACAATTCCAACAGTGTCAA...TAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAGACAAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | GTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCGCAGCATGTGGATCTaGATGGTAGAGAGGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLTVLPEVAVQLEAPKAKRSMWI*MVERSG Trigger: CCCCGACCTCTCTACCATCCAGATCCACATGCTGCG...CTTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCGATCCTTCCATCGGCTaGTATGGACACCAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCSPRWQCSWKPPKPSDPSIG*YGHQDF Trigger: GAAATCTTGGTGTCCATATCAGCCGATGGAAGGATC...GCTTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | TGTGAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGGAGGGTCCAAAGTGCTaGTCTGAAGGTCCCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CECSLCSPRWQCSWKPPKEGPKC*SEGPKS Trigger: AGATTTGGGACCTTCAGATCAGCACTTTGGACCCTC...CTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCCAATTTGTTTGGGTTTaGGGCAGCATATCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCSPRWQCSWKPPKPSQFVWV*GSISFP Trigger: GGGAAAGGATATGCTGCCTCAAACCCAAACAAATTG...GCTTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | TGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCTCCAAAGTGCTGATCTaGAGGTCCCAAATCTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: CSLCSPRWQCSWKPPKPSSKVLI*RSQIST Trigger: AGTAGAGATTTGGGACCTTCAGATCAGCACTTTGGA...GCTTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
||
| CDS-3UTR TCA 90 bp | GACCTCCGTGAATTCAAGGCCAGTTGGTTCCAGGCCCTATCTCAAACAACAACCCAGTGGATGGGAACGTaGGAAGCCCTGGGAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: DLREFKASWFQALSQTTTQWMGT*EALGGH Trigger: GTGTCCTCCCAGGGCTTCTCACGTTCCCATCCACTG...GGTTGTTGTTTGAGATAGGGCCTGGAACCAACTGGCCTTGAATTCACGGAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS-3UTR GCA 90 bp | ACACACCCTGGCTTCTTTCCTCCACTCAAAACACCTTACAGAAAAGGCTGTCACCGAAGCTGGCCTGCTTaGGGGTGCTCGTCGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: THPGFFPPLKTPYRKGCHRSWPA*GCSSES Trigger: GCTCTCCGACGAGCACCCGCAAGCAGGCCAGCTTCG...GTGACAGCCTTTTCTGTAAGGTGTTTTGAGTGGAGGAAAGAAGCCAGGGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | CTGAGTGAGAGGACCTCCGTGAATTCAAGGCCAGTTGGTTCCAGGCCCTATCTCCCTGCAAACTGGGGATaGAGTCTGGCTTTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSERTSVNSRPVGSRPYLPANWG*SLAFAQ Trigger: CTGGGCAAAAGCCAGACTGCATCCCCAGTTTGCAGG...GAGATAGGGCCTGGAACCAACTGGCCTTGAATTCACGGAGGTCCTCTCACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGGGTCCCAAATGTTTTTaGGGTGATTCACTACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CECSLCSPRWQCSWKPPKGPKCF*GDSLLS Trigger: GGACAGTAGTGAATCACCTCAAAAACATTTGGGACC...CTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | CCTAAACCCAAGAGCCAGCTAAAATCGCCTTGCTTTTGTCTAACACATAGCTCCCGAAGCTGGCCTGCTTaGGGGTGCTCGTCGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKPKSQLKSPCFCLTHSSRSWPA*GCSSES Trigger: GCTCTCCGACGAGCACCCGCAAGCAGGCCAGCTTCG...GGAGCTATGTGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | ATGACCTGGCCTAAACCCAAGAGCCAGCTAAAATCGCCTTGCTTTTGTCTAACACGAAGCTGGCCTGCTTaGGGGTGCTCGTCGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MTWPKPKSQLKSPCFCLTRSWPA*GCSSES Trigger: GCTCTCCGACGAGCACCCGCAAGCAGGCCAGCTTCG...TGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGGCCAGGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | GCAACCTGGCCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTTGGCAAACCGCAGCATGTGGATCTaGATGGTAGAGAGGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATWPSLSPTRRQSVSLANRSMWI*MVERSG Trigger: CCCCGACCTCTCTACCATCCAGATCCACATGCTGCG...GTTTGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGGCCAGGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | GGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCTTGGGAAGTTAGTTTGACATTCGTGTCCTTGGGGTaGAAAGCAAAGCACATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GGSAVGSPQSQAWEVSLTFVSLG*KAKHIP Trigger: GGGGATGTGCTTTGCTTTTCACCCCAAGGACACGAA...TGTCAAACTAACTTCCCAAGCTTGGCTTTGGGGGCTTCCAACTGCACTGCCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
||
| CDS-3UTR GCA 90 bp | TTGATTACGTCTCCCCGGCTAGTGTCAGAAGCAGTAGGCATATTTCTCAGCTCGTTTCCCCTCCCTTCTTaGCGCCTGTCGCAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LITSPRLVSEAVGIFLSSFPLPS*RLSQWF Trigger: GAACCACTGCGACAGGCGGCAAGAAGGGAGGGGAAA...CGAGCTGAGAAATATGCCTACTGCTTCTGACACTAGCCGGGGAGACGTAATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036557.15 |
||
| CDS-3UTR GCA 90 bp | ACCTCCGTGAATTCAAGGCCAGTTGGTTCCAGGCCCTATCTCAAACAACAACCACCTGGGAGGACACCCTaGAAACTGGGGATGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVNSRPVGSRPYLKQQPPGRTP*KLGMQS Trigger: AGACTGCATCCCCAGTTTGCAGGGTGTCCTCCCAGG...TGGTTGTTGTTTGAGATAGGGCCTGGAACCAACTGGCCTTGAATTCACGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGTTCCATCGGCTGATATaGACACCAAGATTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CECSLCSPRWQCSWKPPKFHRLI*TPRFLS Trigger: AGAGAGAAATCTTGGTGTCCATATCAGCCGATGGAA...CTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | TGTGAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGAACAGCCAAAAGGTCTaGGTTTGCTTTATTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CECSLCSPRWQCSWKPPKNSQKV*VCFIPG Trigger: TCCTGGAATAAAGCAAACCCAGACCTTTTGGCTGTT...CTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | GGCCAGTTGGTTCCAGGCCCTATCTCAAACAACAACCAACTTCAGACAGGCATCGAACGTGAGAAGCCCTaGGAGGACACCCTGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GQLVPGPISNNNQLQTGIEREKP*EDTLQT Trigger: AGTTTGCAGGGTGTCCTCCCAGGGCTTCTCACGTTC...GATGCCTGTCTGAAGTTGGTTGTTGTTTGAGATAGGGCCTGGAACCAACTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS-3UTR TCA 90 bp | AGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGGAAGAAATATAATCTaGTCCAAGCGATCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAHCAPRGGSAVGSPQSQGRNII*SKRSFL Trigger: CAAGAAGGATCGCTTGGATCAGATTATATTTCTTCC...TTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | TTGATTACGTCTCCCCGGCTAGTGTCAGAAGCAGTAGGCATATTTCTCAGCTCGGCTGATGGACTTCCTTaGTTGTGCACTGGCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LITSPRLVSEAVGIFLSSADGLP*LCTGTR Trigger: GCGAGTGCCAGTGCACAACCAAGGAAGTCCATCAGC...CGAGCTGAGAAATATGCCTACTGCTTCTGACACTAGCCGGGGAGACGTAATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ACTGCAACCTGGCCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTTGGCAAAAGGCTGCTCACGTTaGGGCCTTTCGTTAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TATWPSLSPTRRQSVSLAKGCSR*GLSLSH Trigger: GTGACTTAACGAAAGGCCTCAACGTGAGCAGCCTTT...TGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGGCCAGGTTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | AGTAGGCATATTTCTCAGCTCGTAGACTGCAACCTGGCCATCACTGTCTCCCACAAAGGCTGCTCACGTTaGGGCCTTTCGTTAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRHISQLVDCNLAITVSHKGCSR*GLSLSH Trigger: GTGACTTAACGAAAGGCCTCAACGTGAGCAGCCTTT...GTGGGAGACAGTGATGGCCAGGTTGCAGTCTACGAGCTGAGAAATATGCCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTAAGTGGGGAGCACTGTTCGTGTCCTTGGGGTaGAAAGCAAAGCACATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IGGTKFCSFRLRFKWGALFVSLG*KAKHIP Trigger: GGGGATGTGCTTTGCTTTTCACCCCAAGGACACGAA...CAGTGCTCCCCACTTAAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
||
| CDS-3UTR TCA 90 bp | TGTGAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCAAACTTCCTTTACTTaGATATCCAGATCGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CECSLCSPRWQCSWKPPKQTSFT*ISRSFC Trigger: GCAAAACGATCTGGATATTCAAGTAAAGGAAGTTTG...CTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTGCTGATGGACTTCCTTaGTTGTGCACTGGCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SCSLPIGGTKFCSFRLRFADGLP*LCTGTR Trigger: GCGAGTGCCAGTGCACAACCAAGGAAGTCCATCAGC...AAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| 3UTR CAA 72 bp | GTAAGGAGAGTGACAGATCATCCTGTGTGGTTTGTCTaGGGCCCAAGCAGAATGTTGATTACGTCTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VRRVTDHPVWFV*GPSRMLITSPR Trigger: CCGGGGAGACGTAATCAACATTCTGCTTGGGCCCAAGACAAACCACACAGGATGATCTGTCACTCTCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | AGCGTAAGGAGAGTGACAGATCATCCTGTGTGGTTTGTCTTGGGCCCAAGCAGAGATCCTTCCATCGGCTaGTATGGACACCAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVRRVTDHPVWFVLGPSRDPSIG*YGHQDF Trigger: GAAATCTTGGTGTCCATATCAGCCGATGGAAGGATC...TCTGCTTGGGCCCAAGACAAACCACACAGGATGATCTGTCACTCTCCTTACGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTCCCGTGTGAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAACCTCTTTATTCTTTaGTGCTCCATTAAATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SESRVSAHCAPRGGSAVGNLFIL*CSIKCL Trigger: CAGACATTTAATGGAGCACCAAAGAATAAAGAGGTT...TCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTCACACGGGACTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | TCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTGGCTTGACGGTATCCTaGTGCCAGATCATAACACCC | + |
|
Preference number: 4 (lower is better) Translates to: SCSLPIGGTKFCSFRLRFGLTVS*CQIITP Trigger: GGGTGTTATGATCTGGCACCAGGATACCGTCAAGCC...AAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
||
| CDS-3UTR CCA 90 bp | GAATTCAAGGCCAGTTGGTTCCAGGCCCTATCTCAAACAACAACCAACTTCAGACTTGTGCTCAGTGGATaGGAACGTGAGAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFKASWFQALSQTTTNFRLVLSG*EREKPW Trigger: CCAGGGCTTCTCACGTTCCCATCCACTGAGCACAAG...TCTGAAGTTGGTTGTTGTTTGAGATAGGGCCTGGAACCAACTGGCCTTGAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS-3UTR TCA 90 bp | CAATGGCTATGCGTAGTAGGTAGTTCTCACTGCCCTGTGGACTCTTATCACCACGATCCTTCCATCGGCTaGTATGGACACCAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QWLCVVGSSHCPVDSYHHDPSIG*YGHQDF Trigger: GAAATCTTGGTGTCCATATCAGCCGATGGAAGGATC...GTGGTGATAAGAGTCCACAGGGCAGTGAGAACTACCTACTACGCATAGCCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | GTCAGAAGCAGTAGGCATATTTCTCAGCTCGTAGACTGCAACCTGGCCATCACTCTTCGGCTCGTCCTCTaGTACCTTAAGATTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRSSRHISQLVDCNLAITLRLVL*YLKIFH Trigger: GTGGAAAATCTTAAGGTAGCAGAGGACGAGCCGAAG...AGTGATGGCCAGGTTGCAGTCTACGAGCTGAGAAATATGCCTACTGCTTCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | CCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGGTCACTACTGTCCAGAACTaGAATGTTGTGGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLPSLCLDYFRKHPDLVTTVQN*NVVAAL Trigger: CAGAGCAGCCACAACATTCCAGTTCTGGACAGTAGT...GACCAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | ACAGAATGGGTTCCATGTGACTTTATACACTGGACCCTTATGTCCTCTATAGGTCGCAGCATGTGGATCTaGATGGTAGAGAGGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TEWVPCDFIHWTLMSSIGRSMWI*MVERSG Trigger: CCCCGACCTCTCTACCATCCAGATCCACATGCTGCG...ACCTATAGAGGACATAAGGGTCCAGTGTATAAAGTCACATGGAACCCATTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| CDS-3UTR TCA 90 bp | CCTAAACCCAAGAGCCAGCTAAAATCGCCTTGCTTTTGTCTAACACATAGCTCCAAAGGCTGCTCACGTTaGGGCCTTTCGTTAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKPKSQLKSPCFCLTHSSKGCSR*GLSLSH Trigger: GTGACTTAACGAAAGGCCTCAACGTGAGCAGCCTTT...GGAGCTATGTGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | TCCAGGGTTAGCAACATTCACGATCAGAGGGTCCAAAGTGCTGATCTGAAGGTCGGTCCCAAATGTTTTTaGGGTGATTCACTACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRVSNIHDQRVQSADLKVGPKCF*GDSLLS Trigger: GGACAGTAGTGAATCACCTCAAAAACATTTGGGACC...GACCTTCAGATCAGCACTTTGGACCCTCTGATCGTGAATGTTGCTAACCCTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| CDS-3UTR TCA 90 bp | CCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGGTCGGTCCCAAATGTTTTTaGGGTGATTCACTACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLLPSLCLDYFRKHPDLVGPKCF*GDSLLS Trigger: GGACAGTAGTGAATCACCTCAAAAACATTTGGGACC...GACCAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | CCACCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGGGTCCCAAATGTTTTTaGGGTGATTCACTACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPLLPSLCLDYFRKHPDLGPKCF*GDSLLS Trigger: GGACAGTAGTGAATCACCTCAAAAACATTTGGGACC...CAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTAAGTGGGGAGCACTGTTCTTCAGACTCTGTTaGGAACATGACTGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IGGTKFCSFRLRFKWGALFFRLC*EHDCWQ Trigger: CTGCCAACAGTCATGTTCTCAACAGAGTCTGAAGAA...CAGTGCTCCCCACTTAAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| CDS-3UTR TCA 90 bp | CCTGGCTTCTTTCCTCCACTCAAAACACCTTACAGAAAAGGCTGTCACGCCCTAAGAATGGGTTCCATGTaGCTTTATACACTGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGFFPPLKTPYRKGCHALRMGSM*LYTLDP Trigger: AGGGTCCAGTGTATAAAGTCACATGGAACCCATTCT...TAGGGCGTGACAGCCTTTTCTGTAAGGTGTTTTGAGTGGAGGAAAGAAGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
||
| CDS-3UTR GCA 90 bp | CCTGGCTTCTTTCCTCCACTCAAAACACCTTACAGAAAAGGCTGTCACGCCCTATCTATCCACTGCACTTaGCAAACAGGTCCCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PGFFPPLKTPYRKGCHALSIHCT*QTGPKC Trigger: ACATTTGGGACCTGTTTGGCAAGTGCAGTGGATAGA...TAGGGCGTGACAGCCTTTTCTGTAAGGTGTTTTGAGTGGAGGAAAGAAGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | AGCGTAAGGAGAGTGACAGATCATCCTGTGTGGTTTGTCTTGGGCCCAAGCAGACAAAAGGTCTGGGTTTaGTTTATTCCAGGAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVRRVTDHPVWFVLGPSRQKVWV*FIPGKA Trigger: AGCCTTTCCTGGAATAAAGCAAACCCAGACCTTTTG...TCTGCTTGGGCCCAAGACAAACCACACAGGATGATCTGTCACTCTCCTTACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | CCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGGTCCATAACACCCCAATCTaGAGAACAGCTCAAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLLPSLCLDYFRKHPDLVHNTPI*RTAQED Trigger: GTCTTCTTGAGCTGTTCTGCAGATTGGGGTGTTATG...GACCAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
||
| CDS-3UTR GCA 90 bp | TCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTAGCGGCAAAAATATATaGGGATTTGGGGGACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCSLPIGGTKFCSFRLRFSGKNI*GFGGPG Trigger: TCCTGGTCCCCCAAATCCGCATATATTTTTGCCGCT...AAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
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| CDS-3UTR CCA 90 bp | AGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTAAGTGGACTACTGTCCAGAACTaGAATGTTGTGGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPIGGTKFCSFRLRFKWTTVQN*NVVAAL Trigger: CAGAGCAGCCACAACATTCCAGTTCTGGACAGTAGT...CCACTTAAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGATTGGCAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | GTCAGAAGCAGTAGGCATATTTCTCAGCTCGTAGACTGCAACCTGGCCATCACTAGATGTTCGTGTCCTTaGGGTGAAAAGCAAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VRSSRHISQLVDCNLAITRCSCP*GEKQST Trigger: TGTGCTTTGCTTTTCACCCCAAGGACACGAACATCT...AGTGATGGCCAGGTTGCAGTCTACGAGCTGAGAAATATGCCTACTGCTTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036557.15 |
||
| CDS-3UTR CCA 90 bp | CCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGGTCAGATGTTCGTGTCCTTaGGGTGAAAAGCAAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PLLPSLCLDYFRKHPDLVRCSCP*GEKQST Trigger: TGTGCTTTGCTTTTCACCCCAAGGACACGAACATCT...GACCAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
||
| CDS-3UTR CCA 90 bp | ACCTCCGTGAATTCAAGGCCAGTTGGTTCCAGGCCCTATCTCAAACAACAACCACTTTCCTTGTATTTTTaGGTCCCGGTCTTTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSVNSRPVGSRPYLKQQPLSLYF*VPVFSR Trigger: CCTGCTAAAGACCGGGACCCAAAAATACAAGGAAAG...TGGTTGTTGTTTGAGATAGGGCCTGGAACCAACTGGCCTTGAATTCACGGAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCTTGGGAAGTTAGTTTGACATCTTCTTCATCCTCTTaGACTTTAGCCAGAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: GGSAVGSPQSQAWEVSLTSSSSS*TLARIT Trigger: TGTAATTCTGGCTAAAGTTCAAGAGGATGAAGAAGA...TGTCAAACTAACTTCCCAAGCTTGGCTTTGGGGGCTTCCAACTGCACTGCCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ACTGCAACCTGGCCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTTGGCAGAACAAGAACACTTGTaGATAAGGCCTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TATWPSLSPTRRQSVSLAEQEHL*IRPSSV Trigger: TACAGAAGAAGGCCTTATTCACAAGTGTTCTTGTTC...TGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGGCCAGGTTGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
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| CDS-3UTR TCA 90 bp | CCTGGCTTCTTTCCTCCACTCAAAACACCTTACAGAAAAGGCTGTCACGCCCTAAAGCGATCCTTCTTGTaGTGTCAAGAGTTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGFFPPLKTPYRKGCHALKRSFL*CQEFVW Trigger: CCAAACAAACTCTTGACATCACAAGAAGGATCGCTT...TAGGGCGTGACAGCCTTTTCTGTAAGGTGTTTTGAGTGGAGGAAAGAAGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| CDS-3UTR TCA 90 bp | AGCGTAAGGAGAGTGACAGATCATCCTGTGTGGTTTGTCTTGGGCCCAAGCAGAGGAAGAAATATAATCTaGTCCAAGCGATCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVRRVTDHPVWFVLGPSRGRNII*SKRSFL Trigger: CAAGAAGGATCGCTTGGATCAGATTATATTTCTTCC...TCTGCTTGGGCCCAAGACAAACCACACAGGATGATCTGTCACTCTCCTTACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
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| CDS-3UTR GCA 90 bp | GCTTGGGAAGTTAGTTTGACACTGTTGGAATTGTGTTTTCTAATGACTGTGTCTTTTCCCCTCCCTTCTTaGCGCCTGTCGCAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AWEVSLTLLELCFLMTVSFPLPS*RLSQWF Trigger: GAACCACTGCGACAGGCGGCAAGAAGGGAGGGGAAA...AGACACAGTCATTAGAAAACACAATTCCAACAGTGTCAAACTAACTTCCCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
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| CDS-3UTR CCA 90 bp | CCTAAACCCAAGAGCCAGCTAAAATCGCCTTGCTTTTGTCTAACACATAGCTCCACTACTGTCCAGAACTaGAATGTTGTGGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKPKSQLKSPCFCLTHSSTTVQN*NVVAAL Trigger: CAGAGCAGCCACAACATTCCAGTTCTGGACAGTAGT...GGAGCTATGTGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| CDS-3UTR CCA 90 bp | TTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTCTGCTGATGGACTTCCTTaGTTGTGCACTGGCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FRKHPDLVCMSETFCFLSADGLP*LCTGTR Trigger: GCGAGTGCCAGTGCACAACCAAGGAAGTCCATCAGC...AGAAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| CDS-3UTR CCA 90 bp | ATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTAAGTGGGGAGCACTGAACAGCCAAAAGGTCTaGGTTTGCTTTATTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGGTKFCSFRLRFKWGALNSQKV*VCFIPG Trigger: TCCTGGAATAAAGCAAACCCAGACCTTTTGGCTGTT...CAGTGCTCCCCACTTAAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| 3UTR CAA 72 bp | CCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTaGGCAAACAGAACGGTTGTAAACTTGATTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSLSPTRRQSVS*ANRTVVNLIPG Trigger: CCCTGGAATCAAGTTTACAACCGTTCTGTTTGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
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| CDS-3UTR TCA 90 bp | GCAACCTGGCCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTTGGCAAACAGAAGTAACTCCATATaGACTCTGATAAATACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATWPSLSPTRRQSVSLANRSNSI*TLINTL Trigger: GAGCGTATTTATCAGAGTTCATATGGAGTTACTTCT...GTTTGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGGCCAGGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
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| CDS-3UTR TCA 90 bp | AGCGTAAGGAGAGTGACAGATCATCCTGTGTGGTTTGTCTTGGGCCCAAGCAGAAGAAGTAACTCCATATaGACTCTGATAAATACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVRRVTDHPVWFVLGPSRRSNSI*TLINTL Trigger: GAGCGTATTTATCAGAGTTCATATGGAGTTACTTCT...TCTGCTTGGGCCCAAGACAAACCACACAGGATGATCTGTCACTCTCCTTACGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | CAATGGCTATGCGTAGTAGGTAGTTCTCACTGCCCTGTGGACTCTTATCACCACCAAATGTTTTTGAGGTaGTTCACTACTGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QWLCVVGSSHCPVDSYHHQMFLR*FTTVQN Trigger: GTTCTGGACAGTAGTGAATCACCTCAAAAACATTTG...GTGGTGATAAGAGTCCACAGGGCAGTGAGAACTACCTACTACGCATAGCCATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | CAACCTGGCCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTTGGCAAACACAAATGTTTTTGAGGTaGTTCACTACTGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QPGHHCLPLEGNLSLWQTQMFLR*FTTVQN Trigger: GTTCTGGACAGTAGTGAATCACCTCAAAAACATTTG...TGTTTGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGGCCAGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ATATCTGTTGTTCTGTCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTGATCCTTCCATCGGCTaGTATGGACACCAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISVVLSCSLPIGGTKFCSDPSIG*YGHQDF Trigger: GAAATCTTGGTGTCCATATCAGCCGATGGAAGGATC...ACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGACAGAACAACAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | CTTGATTCCAGGGTTAGCAACATTCACGATCAGAGGGTCCAAACTTATGTCCTCCAATTTGTTTGGGTTTaGGGCAGCATATCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDSRVSNIHDQRVQTYVLQFVWV*GSISFP Trigger: GGGAAAGGATATGCTGCCTCAAACCCAAACAAATTG...GAGGACATAAGTTTGGACCCTCTGATCGTGAATGTTGCTAACCCTGGAATCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ACACACCCTGGCTTCTTTCCTCCACTCAAAACACCTTACAGAAAAGGCTGTCACAAGCGATCCTTCTTGTaGTGTCAAGAGTTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: THPGFFPPLKTPYRKGCHKRSFL*CQEFVW Trigger: CCAAACAAACTCTTGACATCACAAGAAGGATCGCTT...GTGACAGCCTTTTCTGTAAGGTGTTTTGAGTGGAGGAAAGAAGCCAGGGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | CCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGGTCGGAAGAAATATAATCTaGTCCAAGCGATCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLLPSLCLDYFRKHPDLVGRNII*SKRSFL Trigger: CAAGAAGGATCGCTTGGATCAGATTATATTTCTTCC...GACCAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | TGGTCCCTTTCCGTTAGAGAAGAACAAAGCGTAAGGAGAGTGACAGATCATCCTACTCTGTTGAGAACATaGCTGTTGGCAGGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WSLSVREEQSVRRVTDHPTLLRT*LLAGQR Trigger: TCTTTGACCTGCCAACAGTCATGTTCTCAACAGAGT...AGGATGATCTGTCACTCTCCTTACGCTTTGTTCTTCTCTAACGGAAAGGGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | CTCACTGCCCTGTGGACTCTTATCACCACCATAGACACAAAAGATCTCCAAATTCTTCGGCTCGTCCTCTaGTACCTTAAGATTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTALWTLITTIDTKDLQILRLVL*YLKIFH Trigger: GTGGAAAATCTTAAGGTAGCAGAGGACGAGCCGAAG...AATTTGGAGATCTTTTGTGTCTATGGTGGTGATAAGAGTCCACAGGGCAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | TCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTACTCAGTTGTTGAGATaGTTGACTTCGACACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SCSLPIGGTKFCSFRLRFTQLLR*LTSTLN Trigger: GTTCAGTGTCGAAGTCAAGCATCTCAACAACTGAGT...AAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGATCTGAAGGTCCCAAATCTCTACTCTATTCTCATTTGCAGCGGCAAAACTACTGTCCAGAACTaGAATGTTGTGGCTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SADLKVPNLYSILICSGKTTVQN*NVVAAL Trigger: CAGAGCAGCCACAACATTCCAGTTCTGGACAGTAGT...TTTGCCGCTGCAAATGAGAATAGAGTAGAGATTTGGGACCTTCAGATCAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| CDS-3UTR CCA 90 bp | AATGTTGATTACGTCTCCCCGGCTAGTGTCAGAAGCAGTAGGCATATTTCTCAGACTGTCTTGTATTTTTaGGTCCCGGTCTTTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NVDYVSPASVRSSRHISQTVLYF*VPVFSR Trigger: CCTGCTAAAGACCGGGACCCAAAAATACAAGACAGT...CTGAGAAATATGCCTACTGCTTCTGACACTAGCCGGGGAGACGTAATCAACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | TGGTCCCTTTCCGTTAGAGAAGAACAAAGCGTAAGGAGAGTGACAGATCATCCTGCTGCAAGCTTCGGCTaGAACACATTTTCCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: WSLSVREEQSVRRVTDHPAASFG*NTFSIK Trigger: TTTAATGGAAAATGTGTTTCAGCCGAAGCTTGCAGC...AGGATGATCTGTCACTCTCCTTACGCTTTGTTCTTCTCTAACGGAAAGGGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | GTTCTGTCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGAAGTAACTCCATATaGACTCTGATAAATACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLSCSLPIGGTKFCSFRLRSNSI*TLINTL Trigger: GAGCGTATTTATCAGAGTTCATATGGAGTTACTTCT...GAGCCTGAAACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGACAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTAAGTGGGGAGCACTGAGAAGTAACTCCATATaGACTCTGATAAATACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IGGTKFCSFRLRFKWGALRSNSI*TLINTL Trigger: GAGCGTATTTATCAGAGTTCATATGGAGTTACTTCT...CAGTGCTCCCCACTTAAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | AGCAATGCATTTCGGATTATTGTTCCCCTGCTGACAGATAAGTGGGATGCTGGCGAACAAGAACACTTGTaGATAAGGCCTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SNAFRIIVPLLTDKWDAGEQEHL*IRPSSV Trigger: TACAGAAGAAGGCCTTATTCACAAGTGTTCTTGTTC...GCCAGCATCCCACTTATCTGTCAGCAGGGGAACAATAATCCGAAATGCATTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | CATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATGCGTAGTAGGTAGTCAATTTGTTTGGGTTTaGGGCAGCATATCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSKEMETMKQWLCVVGSQFVWV*GSISFP Trigger: GGGAAAGGATATGCTGCCTCAAACCCAAACAAATTG...ACTACCTACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | AATGTTGATTACGTCTCCCCGGCTAGTGTCAGAAGCAGTAGGCATATTTCTCAGAAGCGATCCTTCTTGTaGTGTCAAGAGTTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVDYVSPASVRSSRHISQKRSFL*CQEFVW Trigger: CCAAACAAACTCTTGACATCACAAGAAGGATCGCTT...CTGAGAAATATGCCTACTGCTTCTGACACTAGCCGGGGAGACGTAATCAACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGATCTGAAGGTCCCAAATCTCTACTCTATTCTCATTTGCAGCGGCAAAACTCTGTTGAGAACATaGCTGTTGGCAGGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SADLKVPNLYSILICSGKTLLRT*LLAGQR Trigger: TCTTTGACCTGCCAACAGTCATGTTCTCAACAGAGT...TTTGCCGCTGCAAATGAGAATAGAGTAGAGATTTGGGACCTTCAGATCAGCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| CDS-3UTR TCA 90 bp | CTTATATCTGTTGTTCTGTCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTTTCTTCAGACTCTGTTaGGAACATGACTGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LISVVLSCSLPIGGTKFCFFRLC*EHDCWQ Trigger: CTGCCAACAGTCATGTTCTCAACAGAGTCTGAAGAA...ACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGACAGAACAACAGATATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ACCTCCGTGAATTCAAGGCCAGTTGGTTCCAGGCCCTATCTCAAACAACAACCACAAACTTCCTTTACTTaGATATCCAGATCGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSVNSRPVGSRPYLKQQPQTSFT*ISRSFC Trigger: GCAAAACGATCTGGATATTCAAGTAAAGGAAGTTTG...TGGTTGTTGTTTGAGATAGGGCCTGGAACCAACTGGCCTTGAATTCACGGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTTGGCAAACAGAACGGTTGTAAACTTGATTCCAGGGTTAGCAACATTCCTTCGGCTCGTCCTCTaGTACCTTAAGATTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLANRTVVNLIPGLATFLRLVL*YLKIFH Trigger: GTGGAAAATCTTAAGGTAGCAGAGGACGAGCCGAAG...GAATGTTGCTAACCCTGGAATCAAGTTTACAACCGTTCTGTTTGCCAAAGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | CTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATGCGTAGTACTTCGGCTCGTCCTCTaGTACCTTAAGATTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTHSSKEMETMKQWLCVVLRLVL*YLKIFH Trigger: GTGGAAAATCTTAAGGTAGCAGAGGACGAGCCGAAG...TACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | CCTAAACCCAAGAGCCAGCTAAAATCGCCTTGCTTTTGTCTAACACATAGCTCCCAAAAGGTCTGGGTTTaGTTTATTCCAGGAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PKPKSQLKSPCFCLTHSSQKVWV*FIPGKA Trigger: AGCCTTTCCTGGAATAAAGCAAACCCAGACCTTTTG...GGAGCTATGTGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | CTTGATTCCAGGGTTAGCAACATTCACGATCAGAGGGTCCAAACTTATGTCCTCAACAGCCAAAAGGTCTaGGTTTGCTTTATTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LDSRVSNIHDQRVQTYVLNSQKV*VCFIPG Trigger: TCCTGGAATAAAGCAAACCCAGACCTTTTGGCTGTT...GAGGACATAAGTTTGGACCCTCTGATCGTGAATGTTGCTAACCCTGGAATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116316.10 |
||
| 3UTR CAA 72 bp | CAATCTGTCTCTTTGGCAAACAGAACGGTTGTAAACTaGATTCCAGGGTTAGCAACATTCACGATCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVSLANRTVVN*IPGLATFTIRG Trigger: CCCTCTGATCGTGAATGTTGCTAACCCTGGAATCAAGTTTACAACCGTTCTGTTTGCCAAAGAGACAGATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | GCTTGGGAAGTTAGTTTGACACTGTTGGAATTGTGTTTTCTAATGACTGTGTCTAAAGGCTGCTCACGTTaGGGCCTTTCGTTAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AWEVSLTLLELCFLMTVSKGCSR*GLSLSH Trigger: GTGACTTAACGAAAGGCCTCAACGTGAGCAGCCTTT...AGACACAGTCATTAGAAAACACAATTCCAACAGTGTCAAACTAACTTCCCAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ACATCGGGACAGAATGGGTTCCATGTGACTTTATACACTGGACCCTTATGTCCTGAACAAGAACACTTGTaGATAAGGCCTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSGQNGFHVTLYTGPLCPEQEHL*IRPSSV Trigger: TACAGAAGAAGGCCTTATTCACAAGTGTTCTTGTTC...AGGACATAAGGGTCCAGTGTATAAAGTCACATGGAACCCATTCTGTCCCGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| CDS-3UTR TCA 90 bp | GTGACTTACGCCAGCAGAAAATATCTAATCTTTATGACCTGGCCTAAACCCAAGTTCTTCAGACTCTGTTaGGAACATGACTGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTYASRKYLIFMTWPKPKFFRLC*EHDCWQ Trigger: CTGCCAACAGTCATGTTCTCAACAGAGTCTGAAGAA...CTTGGGTTTAGGCCAGGTCATAAAGATTAGATATTTTCTGCTGGCGTAAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | CCACCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGCTCTTTATTCTTTGGTaGTCCATTAAATGTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPLLPSLCLDYFRKHPDLLFILW*SIKCLH Trigger: ATGCAGACATTTAATGGAGCACCAAAGAATAAAGAG...CAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | CCACCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGTACTCTATTCTCATTTaGAGCGGCAAAAATATATGC | + |
|
Preference number: 4 (lower is better) Translates to: PPLLPSLCLDYFRKHPDLYSILI*SGKNIC Trigger: GCATATATTTTTGCCGCTGCAAATGAGAATAGAGTA...CAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
||
| 3UTR CAA 72 bp | TATGTGATGCTTATATCTGTTGTTCTGTCCTGTAGCTaGCCAATCGGTGGGACAAAGTTCTGTAGTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YVMLISVVLSCS*PIGGTKFCSFR Trigger: CCTGAAACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGACAGAACAACAGATATAAGCATCACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ATTGGAATGGAAGTTGTAGCCTACATACTGCTCTCTTCAAGTCAGACTCTTAAGACTCTGTTGAGAACATaGCTGTTGGCAGGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IGMEVVAYILLSSSQTLKTLLRT*LLAGQR Trigger: TCTTTGACCTGCCAACAGTCATGTTCTCAACAGAGT...CTTAAGAGTCTGACTTGAAGAGAGCAGTATGTAGGCTACAACTTCCATTCCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | TGGTCCCTTTCCGTTAGAGAAGAACAAAGCGTAAGGAGAGTGACAGATCATCCTCAAACTTCCTTTACTTaGATATCCAGATCGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WSLSVREEQSVRRVTDHPQTSFT*ISRSFC Trigger: GCAAAACGATCTGGATATTCAAGTAAAGGAAGTTTG...AGGATGATCTGTCACTCTCCTTACGCTTTGTTCTTCTCTAACGGAAAGGGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTCTACTGTCTTGTATTTTTaGGTCCCGGTCTTTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRKHPDLVCMSETFCFLSTVLYF*VPVFSR Trigger: CCTGCTAAAGACCGGGACCCAAAAATACAAGACAGT...AGAAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | CTCACTGCCCTGTGGACTCTTATCACCACCATAGACACAAAAGATCTCCAAATTTCTTCTTCATCCTCTTaGACTTTAGCCAGAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: LTALWTLITTIDTKDLQISSSSS*TLARIT Trigger: TGTAATTCTGGCTAAAGTTCAAGAGGATGAAGAAGA...AATTTGGAGATCTTTTGTGTCTATGGTGGTGATAAGAGTCCACAGGGCAGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | TGCTTTTGTCTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTAACTCAGTTGTTGAGATaGTTGACTTCGACACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CFCLTHSSKEMETMKQWLTQLLR*LTSTLN Trigger: GTTCAGTGTCGAAGTCAAGCATCTCAACAACTGAGT...TAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAGACAAAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | CTTGATTCCAGGGTTAGCAACATTCACGATCAGAGGGTCCAAACTTATGTCCTCCTCTTTATTCTTTGGTaGTCCATTAAATGTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDSRVSNIHDQRVQTYVLLFILW*SIKCLH Trigger: ATGCAGACATTTAATGGAGCACCAAAGAATAAAGAG...GAGGACATAAGTTTGGACCCTCTGATCGTGAATGTTGCTAACCCTGGAATCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | ACTGCCCTGTGGACTCTTATCACCACCATAGACACAAAAGATCTCCAAATTTTTCAAAAGGTCTGGGTTTaGTTTATTCCAGGAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TALWTLITTIDTKDLQIFQKVWV*FIPGKA Trigger: AGCCTTTCCTGGAATAAAGCAAACCCAGACCTTTTG...AAAAATTTGGAGATCTTTTGTGTCTATGGTGGTGATAAGAGTCCACAGGGCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | ATGACCTGGCCTAAACCCAAGAGCCAGCTAAAATCGCCTTGCTTTTGTCTAACAAACCTCTTTATTCTTTaGTGCTCCATTAAATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MTWPKPKSQLKSPCFCLTNLFIL*CSIKCL Trigger: CAGACATTTAATGGAGCACCAAAGAATAAAGAGGTT...TGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGGCCAGGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGAAGTTAGTTTGACACTGTTGGAATTGTGTTTTCTAATGACTGTGTCTACTGTCTTGTATTTTTaGGTCCCGGTCTTTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AWEVSLTLLELCFLMTVSTVLYF*VPVFSR Trigger: CCTGCTAAAGACCGGGACCCAAAAATACAAGACAGT...AGACACAGTCATTAGAAAACACAATTCCAACAGTGTCAAACTAACTTCCCAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ATTGGAATGGAAGTTGTAGCCTACATACTGCTCTCTTCAAGTCAGACTCTTAAGCAAATGTTTTTGAGGTaGTTCACTACTGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IGMEVVAYILLSSSQTLKQMFLR*FTTVQN Trigger: GTTCTGGACAGTAGTGAATCACCTCAAAAACATTTG...CTTAAGAGTCTGACTTGAAGAGAGCAGTATGTAGGCTACAACTTCCATTCCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | TTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTCTCAAATGTTTTTGAGGTaGTTCACTACTGTCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FRKHPDLVCMSETFCFLSQMFLR*FTTVQN Trigger: GTTCTGGACAGTAGTGAATCACCTCAAAAACATTTG...AGAAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ATTGGAATGGAAGTTGTAGCCTACATACTGCTCTCTTCAAGTCAGACTCTTAAGGAACAAGAACACTTGTaGATAAGGCCTTCTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IGMEVVAYILLSSSQTLKEQEHL*IRPSSV Trigger: TACAGAAGAAGGCCTTATTCACAAGTGTTCTTGTTC...CTTAAGAGTCTGACTTGAAGAGAGCAGTATGTAGGCTACAACTTCCATTCCAAT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | TGCTTTTGTCTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATCTTCTTCATCCTCTTaGACTTTAGCCAGAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: CFCLTHSSKEMETMKQWLSSSSS*TLARIT Trigger: TGTAATTCTGGCTAAAGTTCAAGAGGATGAAGAAGA...TAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAGACAAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ACTTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTTCTTCTTCATCCTCTTaGACTTTAGCCAGAATTACA | + |
|
Preference number: 4 (lower is better) Translates to: TLENTLTWSVCLRPSVFFSSSSS*TLARIT Trigger: TGTAATTCTGGCTAAAGTTCAAGAGGATGAAGAAGA...AAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR TCA 90 bp | ACTTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTCAAACTTCCTTTACTTaGATATCCAGATCGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLENTLTWSVCLRPSVFFQTSFT*ISRSFC Trigger: GCAAAACGATCTGGATATTCAAGTAAAGGAAGTTTG...AAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CCA 90 bp | CTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATGCGTAGTAAACCTCTTTATTCTTTaGTGCTCCATTAAATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTHSSKEMETMKQWLCVVNLFIL*CSIKCL Trigger: CAGACATTTAATGGAGCACCAAAGAATAAAGAGGTT...TACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | GACACTGTTGGAATTGTGTTTTCTAATGACTGTGTCTTAAGTAATCCTCAAAGTACTCAGTTGTTGAGATaGTTGACTTCGACACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DTVGIVFSNDCVLSNPQSTQLLR*LTSTLN Trigger: GTTCAGTGTCGAAGTCAAGCATCTCAACAACTGAGT...ACTTTGAGGATTACTTAAGACACAGTCATTAGAAAACACAATTCCAACAGTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR GCA 90 bp | TTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTCTCTCTTTATTCTTTGGTaGTCCATTAAATGTCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FRKHPDLVCMSETFCFLSLFILW*SIKCLH Trigger: ATGCAGACATTTAATGGAGCACCAAAGAATAAAGAG...AGAAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | TGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCGAAAGGCTGCTCACGTaGAGGCCTTTCGTTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSLCSPRWQCSWKPPKPSERLLT*RPFVKS Trigger: TGACTTAACGAAAGGCCTCAACGTGAGCAGCCTTTC...GCTTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | AGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGAAAGGCTGCTCACGTaGAGGCCTTTCGTTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SAHCAPRGGSAVGSPQSQERLLT*RPFVKS Trigger: TGACTTAACGAAAGGCCTCAACGTGAGCAGCCTTTC...TTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | TGTGAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCTCTATCCACTGCACTaGCCAAACAGGTCCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: CECSLCSPRWQCSWKPPKLYPLH*PNRSQM Trigger: CATTTGGGACCTGTTTGGCAAGTGCAGTGGATAGAG...CTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGAGTTTGTTTGGCTTaGCTGACGCAGCATGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ECSLCSPRWQCSWKPPKPRVCLA*LTQHVD Trigger: ATCCACATGCTGCGTCAGCAAAGCCAAACAAACTCT...TGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | TGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCCCAATTTGTTTGGGTTaGAGGCAGCATATCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSLCSPRWQCSWKPPKPSPICLG*RQHILS Trigger: GGAAAGGATATGCTGCCTCAAACCCAAACAAATTGG...GCTTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | AGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAATTTATAAACAGGGAGTaGACGGTAGGCTGCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SAHCAPRGGSAVGSPQSQFINRE*TVGCKL Trigger: AAGCTTGCAGCCTACCGTCAACTCCCTGTTTATAAA...TTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAGTCCCGTGTGAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAACCAAGATTTCTCTCTaGTCATCCCCAGTAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SESRVSAHCAPRGGSAVGTKISL*SSPVVP Trigger: AGGAACTACTGGGGATGACAAGAGAGAAATCTTGGT...TCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTCACACGGGACTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GAGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAGTCTTCTTCATCCTCTaGAACTTTAGCCAGAATTAC | + |
|
Preference number: 5 (lower is better) Translates to: ECSLCSPRWQCSWKPPKPVFFIL*NFSQNY Trigger: GTAATTCTGGCTAAAGTTCAAGAGGATGAAGAAGAC...TGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | ATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTAAGTGGGGAGCACTGTTTTCCCCTCCCTTCTaGCCGCCTGTCGCAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IGGTKFCSFRLRFKWGALFSPPF*PPVAVV Trigger: AACCACTGCGACAGGCGGCAAGAAGGGAGGGGAAAA...CAGTGCTCCCCACTTAAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
||
| CDS-3UTR CAA 90 bp | AGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGTCTTCTTCATCCTCTaGAACTTTAGCCAGAATTAC | + |
|
Preference number: 5 (lower is better) Translates to: SAHCAPRGGSAVGSPQSQVFFIL*NFSQNY Trigger: GTAATTCTGGCTAAAGTTCAAGAGGATGAAGAAGAC...TTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GCAACCTGGCCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTTGGCAAACGCTCTGGCCATGGGTTaGCTTTATTCCAGGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATWPSLSPTRRQSVSLANALAMG*LYSRKG Trigger: GCCTTTCCTGGAATAAAGCAAACCCATGGCCAGAGC...GTTTGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGGCCAGGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036557.15 |
||
| CDS-3UTR CAA 90 bp | ACTGCAACCTGGCCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTTGGCATCTCCAGCTCTTCCTTaGATATGGCTGCCTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TATWPSLSPTRRQSVSLASPALP*IWLPQL Trigger: CAGCTGAGGCAGCCATATCAAAGGAAGAGCTGGAGA...TGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGGCCAGGTTGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | AGTAGGCATATTTCTCAGCTCGTAGACTGCAACCTGGCCATCACTGTCTCCCACTCCAGAACTGGAATGTaGTGGCTGCTCTGCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: SRHISQLVDCNLAITVSHSRTGM*WLLCTL Trigger: CAATGTGCAGAGCAGCCACAACATTCCAGTTCTGGA...GTGGGAGACAGTGATGGCCAGGTTGCAGTCTACGAGCTGAGAAATATGCCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | CTAGTTAGGGTGACCCACATGGATAACCCCTTCCAAGTCTGTGTGGGTGTGTGTCTCTATCCACTGCACTaGCCAAACAGGTCCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LVRVTHMDNPFQVCVGVCLYPLH*PNRSQM Trigger: CATTTGGGACCTGTTTGGCAAGTGCAGTGGATAGAG...ACACACACCCACACAGACTTGGAAGGGGTTATCCATGTGGGTCACCCTAACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | ACTGCAACCTGGCCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTTGGCACTCTATCCACTGCACTaGCCAAACAGGTCCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TATWPSLSPTRRQSVSLALYPLH*PNRSQM Trigger: CATTTGGGACCTGTTTGGCAAGTGCAGTGGATAGAG...TGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGGCCAGGTTGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | CCTAAACCCAAGAGCCAGCTAAAATCGCCTTGCTTTTGTCTAACACATAGCTCCTTTTCCCCTCCCTTCTaGCCGCCTGTCGCAGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PKPKSQLKSPCFCLTHSSFSPPF*PPVAVV Trigger: AACCACTGCGACAGGCGGCAAGAAGGGAGGGGAAAA...GGAGCTATGTGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
||
| CDS-3UTR CAA 90 bp | AGTGCTCACTGTGCTCCCCGAGGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAATCTAGGTATTGCTCATaGTATGAACAAGAACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SAHCAPRGGSAVGSPQSQSRYCS*YEQEHL Trigger: CAAGTGTTCTTGTTCATACAATGAGCAATACCTAGA...TTGGCTTTGGGGGCTTCCAACTGCACTGCCACCTCGGGGAGCACAGTGAGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
||
| CDS-3UTR CAA 90 bp | GTCAGAAGCAGTAGGCATATTTCTCAGCTCGTAGACTGCAACCTGGCCATCACTTCTCCAGCTCTTCCTTaGATATGGCTGCCTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRSSRHISQLVDCNLAITSPALP*IWLPQL Trigger: CAGCTGAGGCAGCCATATCAAAGGAAGAGCTGGAGA...AGTGATGGCCAGGTTGCAGTCTACGAGCTGAGAAATATGCCTACTGCTTCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCTTGGGAAGTTAGTTTGACACCAATTTGTTTGGGTTaGAGGCAGCATATCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGSAVGSPQSQAWEVSLTPICLG*RQHILS Trigger: GGAAAGGATATGCTGCCTCAAACCCAAACAAATTGG...TGTCAAACTAACTTCCCAAGCTTGGCTTTGGGGGCTTCCAACTGCACTGCCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | TTGATTACGTCTCCCCGGCTAGTGTCAGAAGCAGTAGGCATATTTCTCAGCTCGACATGGGGTTCTTTATaGACCAGCAGCAGGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LITSPRLVSEAVGIFLSSTWGSL*TSSRPF Trigger: GAATGGCCTGCTGCTGGTCAATAAAGAACCCCATGT...CGAGCTGAGAAATATGCCTACTGCTTCTGACACTAGCCGGGGAGACGTAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS TCA 90 bp | AGCCAGATAGATGTTCGTGTCCATGACAATCCAGTCCTTTGCGGATaGTCCACTTGGAGATCCTTCCATCGGCTGATATGGACACCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SQIDVRVHDNPVLCG*STWRSFHRLIWTPR Trigger: TCTTGGTGTCCATATCAGCCGATGGAAGGATCTCCAAGTGGATCATCCGCAAAGGACTGGATTGTCATGGACACGAACATCTATCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS TCA 90 bp | CTCTATCCACTGCACTTGCCAAACAGGTCCCAAATGTTTTTGAGGTaGTTCACTACTGTCCAGAACTGGAATGTTGTGGCTGCTCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LYPLHLPNRSQMFLR*FTTVQNWNVVAALH Trigger: GTGCAGAGCAGCCACAACATTCCAGTTCTGGACAGTAGTGAATCACCTCAAAAACATTTGGGACCTGTTTGGCAAGTGCAGTGGATAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS TCA 90 bp | TTCGCTTCAGTCGCATCAAATCATGACAATCCAGTCCTTTGCGGATaGTCCACTTGGAGATCCTTCCATCGGCTGATATGGACACCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FASVASNHDNPVLCG*STWRSFHRLIWTPR Trigger: TCTTGGTGTCCATATCAGCCGATGGAAGGATCTCCAAGTGGATCATCCGCAAAGGACTGGATTGTCATGATTTGATGCGACTGAAGCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
||
| CDS-3UTR CAA 90 bp | CCACCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGTTTATAAACAGGGAGTaGACGGTAGGCTGCAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPLLPSLCLDYFRKHPDLFINRE*TVGCKL Trigger: AAGCTTGCAGCCTACCGTCAACTCCCTGTTTATAAA...CAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | CCACCCTTACTGCCCAGTCTCTGTCTAGACTACTTTAGAAAACACCCTGACCTGACCAAGATTTCTCTCTaGTCATCCCCAGTAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPLLPSLCLDYFRKHPDLTKISL*SSPVVP Trigger: AGGAACTACTGGGGATGACAAGAGAGAAATCTTGGT...CAGGTCAGGGTGTTTTCTAAAGTAGTCTAGACAGAGACTGGGCAGTAAGGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | CCTGGCTTCTTTCCTCCACTCAAAACACCTTACAGAAAAGGCTGTCACGCCCTAATACGGCCAATTTGTTaGGGTTTGAGGCAGCATATC | + |
|
Preference number: 5 (lower is better) Translates to: PGFFPPLKTPYRKGCHALIRPIC*GLRQHI Trigger: GATATGCTGCCTCAAACCCAAACAAATTGGCCGTAT...TAGGGCGTGACAGCCTTTTCTGTAAGGTGTTTTGAGTGGAGGAAAGAAGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| CDS TCA 90 bp | TCTTGCTCTATCCACTGCACTTGCCAAACAGGTCCCAAATGTTTTTaGGGTGATTCACTACTGTCCAGAACTGGAATGTTGTGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SCSIHCTCQTGPKCF*GDSLLSRTGMLWLL Trigger: GAGCAGCCACAACATTCCAGTTCTGGACAGTAGTGAATCACCTCAAAAACATTTGGGACCTGTTTGGCAAGTGCAGTGGATAGAGCAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| CDS GCA 90 bp | GTTTTTGAGGTGATTCACTACTGTCCAGAACTGGAATGTTGTGGCTaGTCTGCACATTGTAAATCGCAACGGTGCCATTGTGGTAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VFEVIHYCPELECCG*SAHCKSQRCHCGSQ Trigger: TTGGCTACCACAATGGCACCGTTGCGATTTACAATGTGCAGAGCAGCCACAACATTCCAGTTCTGGACAGTAGTGAATCACCTCAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GCAACCTGGCCATCACTGTCTCCCACTAGAAGGCAATCTGTCTCTTTGGCAAACGTCTTCTTCATCCTCTaGAACTTTAGCCAGAATTAC | + |
|
Preference number: 5 (lower is better) Translates to: ATWPSLSPTRRQSVSLANVFFIL*NFSQNY Trigger: GTAATTCTGGCTAAAGTTCAAGAGGATGAAGAAGAC...GTTTGCCAAAGAGACAGATTGCCTTCTAGTGGGAGACAGTGATGGCCAGGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | ATATCTGTTGTTCTGTCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTGAAAGGCTGCTCACGTaGAGGCCTTTCGTTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ISVVLSCSLPIGGTKFCSERLLT*RPFVKS Trigger: TGACTTAACGAAAGGCCTCAACGTGAGCAGCCTTTC...ACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGACAGAACAACAGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | CTTATATCTGTTGTTCTGTCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTTCCAGAACTGGAATGTaGTGGCTGCTCTGCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: LISVVLSCSLPIGGTKFCSRTGM*WLLCTL Trigger: CAATGTGCAGAGCAGCCACAACATTCCAGTTCTGGA...ACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGACAGAACAACAGATATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | ATCGGTGGGACAAAGTTCTGTAGTTTCAGGCTCAGGTTTAAGTGGGGAGCACTGAAAATATATGCGGATTaGGGGGACCAGGAAACATCA | + |
|
Preference number: 5 (lower is better) Translates to: IGGTKFCSFRLRFKWGALKIYAD*GDQETS Trigger: TGATGTTTCCTGGTCCCCCAAATCCGCATATATTTT...CAGTGCTCCCCACTTAAACCTGAGCCTGAAACTACAGAACTTTGTCCCACCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
||
| CDS-3UTR CAA 90 bp | GGTGGCAGTGCAGTTGGAAGCCCCCAAAGCCAAGCTTGGGAAGTTAGTTTGACACTACTCTATTCTCATTaGCAGCGGCAAAAATATATG | + |
|
Preference number: 5 (lower is better) Translates to: GGSAVGSPQSQAWEVSLTLLYSH*QRQKYM Trigger: CATATATTTTTGCCGCTGCAAATGAGAATAGAGTAG...TGTCAAACTAACTTCCCAAGCTTGGCTTTGGGGGCTTCCAACTGCACTGCCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
||
| CDS-3UTR CAA 90 bp | CTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATGCGTAGTAGAAAGGCTGCTCACGTaGAGGCCTTTCGTTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTHSSKEMETMKQWLCVVERLLT*RPFVKS Trigger: TGACTTAACGAAAGGCCTCAACGTGAGCAGCCTTTC...TACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | CTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATGCGTAGTATCCAGAACTGGAATGTaGTGGCTGCTCTGCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: LTHSSKEMETMKQWLCVVSRTGM*WLLCTL Trigger: CAATGTGCAGAGCAGCCACAACATTCCAGTTCTGGA...TACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | AATGTTGATTACGTCTCCCCGGCTAGTGTCAGAAGCAGTAGGCATATTTCTCAGCCAATTTGTTTGGGTTaGAGGCAGCATATCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NVDYVSPASVRSSRHISQPICLG*RQHILS Trigger: GGAAAGGATATGCTGCCTCAAACCCAAACAAATTGG...CTGAGAAATATGCCTACTGCTTCTGACACTAGCCGGGGAGACGTAATCAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | CATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATGCGTAGTAGGTAGTAGAGTTTGTTTGGCTTaGCTGACGCAGCATGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HSSKEMETMKQWLCVVGSRVCLA*LTQHVD Trigger: ATCCACATGCTGCGTCAGCAAAGCCAAACAAACTCT...ACTACCTACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | ATTGGAATGGAAGTTGTAGCCTACATACTGCTCTCTTCAAGTCAGACTCTTAAGTCTCCAGCTCTTCCTTaGATATGGCTGCCTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IGMEVVAYILLSSSQTLKSPALP*IWLPQL Trigger: CAGCTGAGGCAGCCATATCAAAGGAAGAGCTGGAGA...CTTAAGAGTCTGACTTGAAGAGAGCAGTATGTAGGCTACAACTTCCATTCCAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | AGCGTAAGGAGAGTGACAGATCATCCTGTGTGGTTTGTCTTGGGCCCAAGCAGAGCAAACTTCCTTTACTaGAATATCCAGATCGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SVRRVTDHPVWFVLGPSRANFLY*NIQIVL Trigger: CAAAACGATCTGGATATTCAAGTAAAGGAAGTTTGC...TCTGCTTGGGCCCAAGACAAACCACACAGGATGATCTGTCACTCTCCTTACGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | TTACACACCCTGGCTTCTTTCCTCCACTCAAAACACCTTACAGAAAAGGCTGTCACTACTTTCACTGTCTaGTATTTTTGGGTCCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LHTLASFLHSKHLTEKAVTTFTV*YFWVPV Trigger: GACCGGGACCCAAAAATACAAGACAGTGAAAGTAGT...GACAGCCTTTTCTGTAAGGTGTTTTGAGTGGAGGAAAGAAGCCAGGGTGTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS CCA 90 bp | TTGTTCTCTAAATCCAAAGTTTCCATAGCCAACAGCCAAAAGGTCTaGGTTTGCTTTATTCCAGGAAAGGCTGCTCACGTTGAGGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFSKSKVSIANSQKV*VCFIPGKAAHVEAF Trigger: AAAGGCCTCAACGTGAGCAGCCTTTCCTGGAATAAAGCAAACCCAGACCTTTTGGCTGTTGGCTATGGAAACTTTGGATTTAGAGAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | ACTTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTTCCAGAACTGGAATGTaGTGGCTGCTCTGCACATTG | + |
|
Preference number: 5 (lower is better) Translates to: TLENTLTWSVCLRPSVFFSRTGM*WLLCTL Trigger: CAATGTGCAGAGCAGCCACAACATTCCAGTTCTGGA...AAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | ACTTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTCTCTATCCACTGCACTaGCCAAACAGGTCCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TLENTLTWSVCLRPSVFFLYPLH*PNRSQM Trigger: CATTTGGGACCTGTTTGGCAAGTGCAGTGGATAGAG...AAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | CATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATGCGTAGTAGGTAGTACCAAGATTTCTCTCTaGTCATCCCCAGTAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HSSKEMETMKQWLCVVGSTKISL*SSPVVP Trigger: AGGAACTACTGGGGATGACAAGAGAGAAATCTTGGT...ACTACCTACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | ATATCTGTTGTTCTGTCCTGTAGCTTGCCAATCGGTGGGACAAAGTTCTGTAGTACTACTTTCACTGTCTaGTATTTTTGGGTCCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISVVLSCSLPIGGTKFCSTTFTV*YFWVPV Trigger: GACCGGGACCCAAAAATACAAGACAGTGAAAGTAGT...ACTACAGAACTTTGTCCCACCGATTGGCAAGCTACAGGACAGAACAACAGATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | CATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATGCGTAGTAGGTAGTACTACTTTCACTGTCTaGTATTTTTGGGTCCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HSSKEMETMKQWLCVVGSTTFTV*YFWVPV Trigger: GACCGGGACCCAAAAATACAAGACAGTGAAAGTAGT...ACTACCTACTACGCATAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | TGCTTTTGTCTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTAACATGGGGTTCTTTATaGACCAGCAGCAGGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: CFCLTHSSKEMETMKQWLTWGSL*TSSRPF Trigger: GAATGGCCTGCTGCTGGTCAATAAAGAACCCCATGT...TAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAGACAAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS GCA 90 bp | TTCCATTTCCACTTCTTCTTCATCTTCCTTCTTCGGCTCGTCCTCTaGTACCTTAAGATTTTCCACTTGCAAAGTTTCTTCAGGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FHFHFFFIFLLRLVL*YLKIFHLQSFFRLF Trigger: GAAGAGCCTGAAGAAACTTTGCAAGTGGAAAATCTTAAGGTAGCAGAGGACGAGCCGAAGAAGGAAGATGAAGAAGAAGTGGAAATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | CCTAAACCCAAGAGCCAGCTAAAATCGCCTTGCTTTTGTCTAACACATAGCTCCCTTAAGATTTTCCACTaGCAAAGTTTCTTCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PKPKSQLKSPCFCLTHSSLKIFH*QSFFRL Trigger: GAGCCTGAAGAAACTTTGCAAGTGGAAAATCTTAAG...GGAGCTATGTGTTAGACAAAAGCAAGGCGATTTTAGCTGGCTCTTGGGTTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GTGACTTACGCCAGCAGAAAATATCTAATCTTTATGACCTGGCCTAAACCCAAGATACGGCCAATTTGTTaGGGTTTGAGGCAGCATATC | + |
|
Preference number: 5 (lower is better) Translates to: VTYASRKYLIFMTWPKPKIRPIC*GLRQHI Trigger: GATATGCTGCCTCAAACCCAAACAAATTGGCCGTAT...CTTGGGTTTAGGCCAGGTCATAAAGATTAGATATTTTCTGCTGGCGTAAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GTGACTTACGCCAGCAGAAAATATCTAATCTTTATGACCTGGCCTAAACCCAAGAGGCAATCTGTCTCTTaGGCAAACAGAACGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VTYASRKYLIFMTWPKPKRQSVS*ANRTVV Trigger: TACAACCGTTCTGTTTGCCAAAGAGACAGATTGCCT...CTTGGGTTTAGGCCAGGTCATAAAGATTAGATATTTTCTGCTGGCGTAAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
||
| CDS-3UTR CAA 90 bp | TCTCACTGCCCTGTGGACTCTTATCACCACCATAGACACAAAAGATCTCCAAATCTTAAGATTTTCCACTaGCAAAGTTTCTTCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHCPVDSYHHHRHKRSPNLKIFH*QSFFRL Trigger: GAGCCTGAAGAAACTTTGCAAGTGGAAAATCTTAAG...ATTTGGAGATCTTTTGTGTCTATGGTGGTGATAAGAGTCCACAGGGCAGTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | ACTGCCCTGTGGACTCTTATCACCACCATAGACACAAAAGATCTCCAAATTTTTACCAAGATTTCTCTCTaGTCATCCCCAGTAGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TALWTLITTIDTKDLQIFTKISL*SSPVVP Trigger: AGGAACTACTGGGGATGACAAGAGAGAAATCTTGGT...AAAAATTTGGAGATCTTTTGTGTCTATGGTGGTGATAAGAGTCCACAGGGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | ACTGCCCTGTGGACTCTTATCACCACCATAGACACAAAAGATCTCCAAATTTTTATACGGCCAATTTGTTaGGGTTTGAGGCAGCATATC | + |
|
Preference number: 5 (lower is better) Translates to: TALWTLITTIDTKDLQIFIRPIC*GLRQHI Trigger: GATATGCTGCCTCAAACCCAAACAAATTGGCCGTAT...AAAAATTTGGAGATCTTTTGTGTCTATGGTGGTGATAAGAGTCCACAGGGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GCTTGGGAAGTTAGTTTGACACTGTTGGAATTGTGTTTTCTAATGACTGTGTCTAGAGTTTGTTTGGCTTaGCTGACGCAGCATGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AWEVSLTLLELCFLMTVSRVCLA*LTQHVD Trigger: ATCCACATGCTGCGTCAGCAAAGCCAAACAAACTCT...AGACACAGTCATTAGAAAACACAATTCCAACAGTGTCAAACTAACTTCCCAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GTAAACTTGATTCCAGGGTTAGCAACATTCACGATCAGAGGGTCCAAAGTGCTGGCAAACTTCCTTTACTaGAATATCCAGATCGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VNLIPGLATFTIRGSKVLANFLY*NIQIVL Trigger: CAAAACGATCTGGATATTCAAGTAAAGGAAGTTTGC...CAGCACTTTGGACCCTCTGATCGTGAATGTTGCTAACCCTGGAATCAAGTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036451.15 |
||
| CDS-3UTR CAA 90 bp | GAATTCAAGGCCAGTTGGTTCCAGGCCCTATCTCAAACAACAACCAACTTCAGAGCAAACTTCCTTTACTaGAATATCCAGATCGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: EFKASWFQALSQTTTNFRANFLY*NIQIVL Trigger: CAAAACGATCTGGATATTCAAGTAAAGGAAGTTTGC...TCTGAAGTTGGTTGTTGTTTGAGATAGGGCCTGGAACCAACTGGCCTTGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS-3UTR CAA 90 bp | GTGACTTACGCCAGCAGAAAATATCTAATCTTTATGACCTGGCCTAAACCCAAGCTTAAGATTTTCCACTaGCAAAGTTTCTTCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VTYASRKYLIFMTWPKPKLKIFH*QSFFRL Trigger: GAGCCTGAAGAAACTTTGCAAGTGGAAAATCTTAAG...CTTGGGTTTAGGCCAGGTCATAAAGATTAGATATTTTCTGCTGGCGTAAGTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GACACTGTTGGAATTGTGTTTTCTAATGACTGTGTCTTAAGTAATCCTCAAAGTACATGGGGTTCTTTATaGACCAGCAGCAGGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: DTVGIVFSNDCVLSNPQSTWGSL*TSSRPF Trigger: GAATGGCCTGCTGCTGGTCAATAAAGAACCCCATGT...ACTTTGAGGATTACTTAAGACACAGTCATTAGAAAACACAATTCCAACAGTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GCTTGGGAAGTTAGTTTGACACTGTTGGAATTGTGTTTTCTAATGACTGTGTCTAGAACGGTTGTAAACTaGATTCCAGGGTTAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: AWEVSLTLLELCFLMTVSRTVVN*IPGLAT Trigger: TGTTGCTAACCCTGGAATCAAGTTTACAACCGTTCT...AGACACAGTCATTAGAAAACACAATTCCAACAGTGTCAAACTAACTTCCCAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106868.4 |
||
| CDS-3UTR CAA 90 bp | TGCTTTTGTCTAACACATAGCTCCAAAGAAATGGAGACCATGAAGCAATGGCTATCTAGGTATTGCTCATaGTATGAACAAGAACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CFCLTHSSKEMETMKQWLSRYCS*YEQEHL Trigger: CAAGTGTTCTTGTTCATACAATGAGCAATACCTAGA...TAGCCATTGCTTCATGGTCTCCATTTCTTTGGAGCTATGTGTTAGACAAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
||
| CDS-3UTR CAA 90 bp | TTTAGAAAACACCCTGACCTGGTCTGTATGTCTGAGACCTTCTGTTTTCTTTCTGCAAACTTCCTTTACTaGAATATCCAGATCGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FRKHPDLVCMSETFCFLSANFLY*NIQIVL Trigger: CAAAACGATCTGGATATTCAAGTAAAGGAAGTTTGC...AGAAAGAAAACAGAAGGTCTCAGACATACAGACCAGGTCAGGGTGTTTTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS-3UTR CAA 90 bp | GACACTGTTGGAATTGTGTTTTCTAATGACTGTGTCTTAAGTAATCCTCAAAGTCTTAAGATTTTCCACTaGCAAAGTTTCTTCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DTVGIVFSNDCVLSNPQSLKIFH*QSFFRL Trigger: GAGCCTGAAGAAACTTTGCAAGTGGAAAATCTTAAG...ACTTTGAGGATTACTTAAGACACAGTCATTAGAAAACACAATTCCAACAGTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS GCA 72 bp | GTGGATGGGAACGTGAGAAGCCCTGGGAGGACACCCTaGAAACTGGGGATGCAGTCTGGCTTTTGCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VDGNVRSPGRTP*KLGMQSGFCPG Trigger: CCCTGGGCAAAAGCCAGACTGCATCCCCAGTTTGCAGGGTGTCCTCCCAGGGCTTCTCACGTTCCCATCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS CCA 72 bp | ATACTTGTGCTCAGTGGATGGGAACGTGAGAAGCCCTaGGAGGACACCCTGCAAACTGGGGATGCAGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILVLSGWEREKP*EDTLQTGDAVW Trigger: CCAGACTGCATCCCCAGTTTGCAGGGTGTCCTCCCAGGGCTTCTCACGTTCCCATCCACTGAGCACAAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS CAA 90 bp | AAGCCCTGGGAGGACACCCTGCAAACTGGGGATGCAGTCTGGCTTTaGCCCAGGGTACTTTCCTTGTATTTTTGGGTCCCGGTCTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: KPWEDTLQTGDAVWL*PRVLSLYFWVPVFS Trigger: GCTAAAGACCGGGACCCAAAAATACAAGGAAAGTACCCTGGGCAAAAGCCAGACTGCATCCCCAGTTTGCAGGGTGTCCTCCCAGGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS CAA 72 bp | GAGGACACCCTGCAAACTGGGGATGCAGTCTGGCTTTaGCCCAGGGTACTTTCCTTGTATTTTTGGGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: EDTLQTGDAVWL*PRVLSLYFWVP Trigger: CGGGACCCAAAAATACAAGGAAAGTACCCTGGGCAAAAGCCAGACTGCATCCCCAGTTTGCAGGGTGTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS CCA 72 bp | CTTCTTCTGTACCAGCCAGATAGATGTTCGTGTCCTTaGGGTGAAAAGCAAAGCACATCCCCGGAGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLLYQPDRCSCP*GEKQSTSPEPV Trigger: GACAGGCTCCGGGGATGTGCTTTGCTTTTCACCCCAAGGACACGAACATCTATCTGGCTGGTACAGAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
||
| CDS CAA 72 bp | CAAGGTCCTCTGACATCGACTCAGTTGTTGAGATGCTaGACTTCGACACTGAACTGCTCCCCAGGACTGACC | + |
|
Preference number: 6 (lower is better) Translates to: QGPLTSTQLLRC*TSTLNCSPGLT Trigger: GGTCAGTCCTGGGGAGCAGTTCAGTGTCGAAGTCAAGCATCTCAACAACTGAGTCGATGTCAGAGGACCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS CAA 90 bp | CTGATCCAAGCGATCCTTCTTGTGATGTCAAGAGTTTGTTTGGCTTaGCTGACGCAGCATGTGGATCTGGATGGTAGAGAGGTCGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LIQAILLVMSRVCLA*LTQHVDLDGREVGV Trigger: CACCCCGACCTCTCTACCATCCAGATCCACATGCTGCGTCAGCAAAGCCAAACAAACTCTTGACATCACAAGAAGGATCGCTTGGATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS TCA 72 bp | CAGCATGTGGATCTGGATGGTAGAGAGGTCGGGGTGTaGCATCAACTCCTTTTGAATCAAGCACCTGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: QHVDLDGREVGV*HQLLLNQAPVL Trigger: CAGTACAGGTGCTTGATTCAAAAGGAGTTGATGTCACACCCCGACCTCTCTACCATCCAGATCCACATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS TCA 72 bp | GATGTTCGTGTCCATGACAATCCAGTCCTTTGCGGATaGTCCACTTGGAGATCCTTCCATCGGCTGATATGG | + |
|
Preference number: 6 (lower is better) Translates to: DVRVHDNPVLCG*STWRSFHRLIW Trigger: CCATATCAGCCGATGGAAGGATCTCCAAGTGGATCATCCGCAAAGGACTGGATTGTCATGGACACGAACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036451.15 ENSMUST00000116316.10 |
||
| CDS TCA 72 bp | GTCGCATCAAATCATGACAATCCAGTCCTTTGCGGATaGTCCACTTGGAGATCCTTCCATCGGCTGATATGG | + |
|
Preference number: 6 (lower is better) Translates to: VASNHDNPVLCG*STWRSFHRLIW Trigger: CCATATCAGCCGATGGAAGGATCTCCAAGTGGATCATCCGCAAAGGACTGGATTGTCATGATTTGATGCGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036557.15 ENSMUST00000106868.4 |
||
| CDS TCA 72 bp | CTGGGTTTGCTTTATTCCAGGAAAGGCTGCTCACGTTaGGGCCTTTCGTTAAGTCACAGGAGAAAGACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGLLYSRKGCSR*GLSLSHRRKTR Trigger: TCTGGTCTTTCTCCTGTGACTTAACGAAAGGCCTCAACGTGAGCAGCCTTTCCTGGAATAAAGCAAACCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS CAA 72 bp | GCGATCCTTCTTGTGATGTCAAGAGTTTGTTTGGCTTaGCTGACGCAGCATGTGGATCTGGATGGTAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: AILLVMSRVCLA*LTQHVDLDGRE Trigger: CTCTCTACCATCCAGATCCACATGCTGCGTCAGCAAAGCCAAACAAACTCTTGACATCACAAGAAGGATCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS CAA 72 bp | AGGAATCTTCAAGGTCCTCTGACATCGACTCAGTTGTaGAGATGCTTGACTTCGACACTGAACTGCTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RNLQGPLTSTQL*RCLTSTLNCSP Trigger: TGGGGAGCAGTTCAGTGTCGAAGTCAAGCATCTCAACAACTGAGTCGATGTCAGAGGACCTTGAAGATTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS GCA 72 bp | GTGATTCACTACTGTCCAGAACTGGAATGTTGTGGCTaGTCTGCACATTGTAAATCGCAACGGTGCCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: VIHYCPELECCG*SAHCKSQRCHC Trigger: ACAATGGCACCGTTGCGATTTACAATGTGCAGAGCAGCCACAACATTCCAGTTCTGGACAGTAGTGAATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS GCA 72 bp | ATTTCTCTCTTGTCATCCCCAGTAGTTCCTCTGTCTTaGTCTATCCACTGCACTTGCCAAACAGGTCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ISLLSSPVVPLS*SIHCTCQTGPK Trigger: TTTGGGACCTGTTTGGCAAGTGCAGTGGATAGAGCAAGACAGAGGAACTACTGGGGATGACAAGAGAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS CCA 72 bp | GTCTGGCTTTTGCCCAGGGTACTTTCCTTGTATTTTTaGGTCCCGGTCTTTAGCAGGCAAACTTCCTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: VWLLPRVLSLYF*VPVFSRQTSFT Trigger: AGTAAAGGAAGTTTGCCTGCTAAAGACCGGGACCCAAAAATACAAGGAAAGTACCCTGGGCAAAAGCCAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148673.2 |
||
| CDS CAA 72 bp | CTTCGGCTCGTCCTCTGCTACCTTAAGATTTTCCACTaGCAAAGTTTCTTCAGGCTCTTCAGGTTCGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRLVLCYLKIFH*QSFFRLFRFVF Trigger: GAACACGAACCTGAAGAGCCTGAAGAAACTTTGCAAGTGGAAAATCTTAAGGTAGCAGAGGACGAGCCGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS CAA 72 bp | ATCCAAGCGATCCTTCTTGTGATGTCAAGAGTTTGTTaGGCTTTGCTGACGCAGCATGTGGATCTGGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: IQAILLVMSRVC*ALLTQHVDLDG Trigger: ACCATCCAGATCCACATGCTGCGTCAGCAAAGCCAAACAAACTCTTGACATCACAAGAAGGATCGCTTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS CAA 72 bp | AAGAGGAATCTTCAAGGTCCTCTGACATCGACTCAGTaGTTGAGATGCTTGACTTCGACACTGAACTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KRNLQGPLTSTQ*LRCLTSTLNCS Trigger: GGAGCAGTTCAGTGTCGAAGTCAAGCATCTCAACAACTGAGTCGATGTCAGAGGACCTTGAAGATTCCTCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS CAA 90 bp | TATAATCTGATCCAAGCGATCCTTCTTGTGATGTCAAGAGTTTGTTaGGCTTTGCTGACGCAGCATGTGGATCTGGATGGTAGAGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: YNLIQAILLVMSRVC*ALLTQHVDLDGREV Trigger: GACCTCTCTACCATCCAGATCCACATGCTGCGTCAGCAAAGCCAAACAAACTCTTGACATCACAAGAAGGATCGCTTGGATCAGATTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS TCA 72 bp | CTGCACTTGCCAAACAGGTCCCAAATGTTTTTGAGGTaGTTCACTACTGTCCAGAACTGGAATGTTGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LHLPNRSQMFLR*FTTVQNWNVVA Trigger: AGCCACAACATTCCAGTTCTGGACAGTAGTGAATCACCTCAAAAACATTTGGGACCTGTTTGGCAAGTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS TCA 72 bp | ATCCACTGCACTTGCCAAACAGGTCCCAAATGTTTTTaGGGTGATTCACTACTGTCCAGAACTGGAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IHCTCQTGPKCF*GDSLLSRTGML Trigger: CAACATTCCAGTTCTGGACAGTAGTGAATCACCTCAAAAACATTTGGGACCTGTTTGGCAAGTGCAGTGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS CCA 72 bp | AAATCCAAAGTTTCCATAGCCAACAGCCAAAAGGTCTaGGTTTGCTTTATTCCAGGAAAGGCTGCTCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: KSKVSIANSQKV*VCFIPGKAAHV Trigger: AACGTGAGCAGCCTTTCCTGGAATAAAGCAAACCCAGACCTTTTGGCTGTTGGCTATGGAAACTTTGGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS GCA 72 bp | CACTTCTTCTTCATCTTCCTTCTTCGGCTCGTCCTCTaGTACCTTAAGATTTTCCACTTGCAAAGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HFFFIFLLRLVL*YLKIFHLQSFF Trigger: GAAGAAACTTTGCAAGTGGAAAATCTTAAGGTAGCAGAGGACGAGCCGAAGAAGGAAGATGAAGAAGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
||
| CDS CAA 90 bp | ATCTTCCTTCTTCGGCTCGTCCTCTGCTACCTTAAGATTTTCCACTaGCAAAGTTTCTTCAGGCTCTTCAGGTTCGTGTTCTTTATAAAC | + |
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Preference number: 6 (lower is better) Translates to: IFLLRLVLCYLKIFH*QSFFRLFRFVFFIN Trigger: GTTTATAAAGAACACGAACCTGAAGAGCCTGAAGAAACTTTGCAAGTGGAAAATCTTAAGGTAGCAGAGGACGAGCCGAAGAAGGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000036557.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| CDS TCA 72 bp | TTTCTCTATTATTTTCTCAGCTTCTTCAGACTCTGTTaGGAACATGACTGTTGGCAGGTCAAAGAATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: FLYYFLSFFRLC*EHDCWQVKESQ Trigger: CTGAGATTCTTTGACCTGCCAACAGTCATGTTCTCAACAGAGTCTGAAGAAGCTGAGAAAATAATAGAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 |
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| CDS CAA 72 bp | CAGGCAAACTTCCTTTACTTGAATATCCAGATCGTTTaGCAGCTAGCAAAGTTTCTGGAATGTTGTAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: QANFLYLNIQIV*QLAKFLECCKN Trigger: ATTCTTACAACATTCCAGAAACTTTGCTAGCTGCAAAACGATCTGGATATTCAAGTAAAGGAAGTTTGCCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036451.15 ENSMUST00000106868.4 ENSMUST00000116316.10 ENSMUST00000148673.2 |
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