Pregenerated sensors for DNAI3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043020Ensembl transcript IDs: ENSMUST00000160285.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR TCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTCTCTCCAGCATCAACTaGGGGTGGATGGGGTCGGAG | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSLSSIN*GWMGSE Trigger: CTCCGACCCCATCCACCCTCAGTTGATGCTGGAGAG...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | CACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGCCCAGCGACACCCATaGCTTGGAGACGGGAGGATT | + |
Preference number: 4 (lower is better) Translates to: HSVKRGKASGVPQELSSRAQRHP*LGDGRI Trigger: AATCCTCCCGTCTCCAAGCCATGGGTGTCGCTGGGC...TCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTCTGCAGCTGCAGCTGTaGCTGCAGGTTTTTGGGGCC | + |
Preference number: 4 (lower is better) Translates to: VKRGKASGVPQELSSRVFLQLQL*LQVFGA Trigger: GGCCCCAAAAACCTGCAGTCACAGCTGCAGCTGCAG...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | CACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGGTGCTCTCCTCCTCTaGGAGGTTCTTCCAGTCGTC | + |
Preference number: 4 (lower is better) Translates to: HSVKRGKASGVPQELSSRGALLL*EVLPVV Trigger: GACGACTGGAAGAACCTCGCAGAGGAGGAGAGCACC...TCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTCGTTGTTGGTGGCTGTaGTTGCTGCTGAGGCTGCAG | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSRCWWL*LLLRLQ Trigger: CTGCAGCCTCAGCAGCAACCACAGCCACCAACAACG...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | ACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAAGGCGACCTCTGGATaGTGTGGACAGCCCCATCGT | + |
Preference number: 4 (lower is better) Translates to: TLSKEREGQRGPPGAVFEKATSG*CGQPHR Trigger: ACGATGGGGCTGTCCACACCATCCAGAGGTCGCCTT...CTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | AAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTCTTGTCCCCAAAGGTaGTCTCCTCCTCTGCGAGGT | + |
Preference number: 4 (lower is better) Translates to: KRTLSKEREGQRGPPGAVSCPQR*SPPLRG Trigger: ACCTCGCAGAGGAGGAGAGCACCTTTGGGGACAAGA...GACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | CACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGCTGCAGCAGCAGTCTaGCGGAATTCTGGACTCTCT | + |
Preference number: 4 (lower is better) Translates to: HSVKRGKASGVPQELSSRAAAAV*RNSGLS Trigger: AGAGAGTCCAGAATTCCGGCAGACTGCTGCTGCAGC...TCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | CACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGATCAACTGAGGGTGGATaGGGTCGGAGAAGCTCCAGA | + |
Preference number: 4 (lower is better) Translates to: HSVKRGKASGVPQELSSRSTEGG*GRRSSR Trigger: TCTGGAGCTTCTCCGACCCCATCCACCCTCAGTTGA...TCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTAAGAAAGGCGACCTCTaGATGGTGTGGACAGCCCCA | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSKKGDL*MVWTAP Trigger: TGGGGCTGTCCACACCATCCAGAGGTCGCCTTTCTT...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTGTAGGACTTCTTCTCTaGGACTTTGCTGAGGCCGAG | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSVGLLL*DFAEAE Trigger: CTCGGCCTCAGCAAAGTCTCAGAGAAGAAGTCCTAC...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | CACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAAGGCATTCTGGTCACTaGAAGTCACTGGTGCACCAA | + |
Preference number: 4 (lower is better) Translates to: HSVKRGKASGVPQELSSRRHSGH*KSLVHQ Trigger: TTGGTGCACCAGTGACTTTCAGTGACCAGAATGCCT...TCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTTTCTGGATGGCCCATaGTCTCCATGTTCATGGGCT | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSFLDGP*SPCSWA Trigger: AGCCCATGAACATGGAGAGCATGGGCCATCCAGAAA...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTCCACGAAGAACTTCGTaGAGAAGTCCTCTATCGGCT | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSPRRTS*RSPLSA Trigger: AGCCGATAGAGGACTTCTGCACGAAGTTCTTCGTGG...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | ACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGTGCTCTCCATGTTCATaGGCTCCTCTTCCTCAGGAA | + |
Preference number: 4 (lower is better) Translates to: TLSKEREGQRGPPGAVFECSPCS*APLPQE Trigger: TTCCTGAGGAAGAGGAGCCCATGAACATGGAGAGCA...CTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | AAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTCTACCGGTGATTGCTaGGAGTTTGCGTTGTTGGTG | + |
Preference number: 4 (lower is better) Translates to: KRTLSKEREGQRGPPGAVSTGDC*EFALLV Trigger: CACCAACAACGCAAACTCCCAGCAATCACCGGTAGA...GACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTATTCTGGGACTGGGCTaGCTCGTGAGTTTTCTCCAG | + |
Preference number: 4 (lower is better) Translates to: VKRGKASGVPQELSSRVFILGLG*LVSFLQ Trigger: CTGGAGAAAACTCACGAGCCAGCCCAGTCCCAGAAT...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | ACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGACGCTAGAGGCATTCTaGTCACTGAAAGTCACTGGT | + |
Preference number: 4 (lower is better) Translates to: TLSKEREGQRGPPGAVFETLEAF*SLKVTG Trigger: ACCAGTGACTTTCAGTGACCAGAATGCCTCTAGCGT...CTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTTGGTACTCCTTCAGATaGGTGTCAGTCTTGTCCCCA | + |
Preference number: 4 (lower is better) Translates to: VKRGKASGVPQELSSRVFWYSFR*VSVLSP Trigger: TGGGGACAAGACTGACACCCATCTGAAGGAGTACCA...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | ACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGATTTCTTTGCGCTGCTaGACGTATTCCAGGTGTCTG | + |
Preference number: 4 (lower is better) Translates to: TLSKEREGQRGPPGAVFEISLRC*TYSRCL Trigger: CAGACACCTGGAATACGTCCAGCAGCGCAAAGAAAT...CTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTGGAGAAACATGGGCTTaGGAGAGGTCTTTTTACTTC | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSGETWA*ERSFYF Trigger: GAAGTAAAAAGACCTCTCTCAAGCCCATGTTTCTCC...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCATTCAAGGAAGGGTaGCTTAAGGTCCAAGGGATT | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSSFKEG*LKVQGI Trigger: AATCCCTTGGACCTTAAGTCACCCTTCCTTGAATGA...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | AAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCCGTATTCCAGGTGTCTaGCTTCTCTCTCAAAGTAGT | + |
Preference number: 4 (lower is better) Translates to: KRTLSKEREGQRGPPGAVRIPGV*LLSQSS Trigger: ACTACTTTGAGAGAGAAGTCAGACACCTGGAATACG...GACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | ACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAAAGCCCATTTTGTCTaGGTGCTTGTGTCCTTGACT | + |
Preference number: 4 (lower is better) Translates to: TLSKEREGQRGPPGAVFEKAHFV*VLVSLT Trigger: AGTCAAGGACACAAGCACGCAGACAAAATGGGCTTT...CTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTGTCACTGAAAGTCACTaGTGCACCAAATTCACTCCG | + |
Preference number: 4 (lower is better) Translates to: VKRGKASGVPQELSSRVFVTESH*CTKFTP Trigger: CGGAGTGAATTTGGTGCACCAGTGACTTTCAGTGAC...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | CACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAACTGAAAGTCACTGGTaGACCAAATTCACTCCGTTT | + |
Preference number: 4 (lower is better) Translates to: HSVKRGKASGVPQELSSRTESHW*TKFTPF Trigger: AAACGGAGTGAATTTGGTGCACCAGTGACTTTCAGT...TCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTACTTCAGCAATGACTTaGAAGCCGACATCTTTCTCA | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSTSAMT*KPTSFS Trigger: TGAGAAAGATGTCGGCTTGCAAGTCATTGCTGAAGT...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTATGGCCATTTTCAATaGAAGACACTGCACAGTGTC | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSYGHFQ*KTLHSV Trigger: GACACTGTGCAGTGTCTTCCATTGAAAATGGCCATA...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTACACTGCACAGTGTCTaGTGTACATCGATTCTTTAT | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSTLHSV*CTSILY Trigger: ATAAAGAATCGATGTACATCAGACACTGTGCAGTGT...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTTCTTTATTGCTGTCTaGTTCAAGGAGAAACATGGG | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSFFIAV*FKEKHG Trigger: CCCATGTTTCTCCTTGAACCAGACAGCAATAAAGAA...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | AACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTATCTTTCTCAACTTGTaGGAGGGTGTAATTTTTCTC | + |
Preference number: 4 (lower is better) Translates to: NAHSVKRGKASGVPQELSIFLNL*EGVIFL Trigger: GAGAAAAATTACACCCTCTCACAAGTTGAGAAAGAT...AGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | CACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGATTGTGGACACATTGTTaGAAAAGTCGACCAAAGATT | + |
Preference number: 4 (lower is better) Translates to: HSVKRGKASGVPQELSSRLWTHC*KSRPKI Trigger: AATCTTTGGTCGACTTTTTCAACAATGTGTCCACAA...TCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTTCTCTCAGAATAATATaGATGGACGACGTACCTTGT | + |
Preference number: 4 (lower is better) Translates to: VKRGKASGVPQELSSRVFSLRII*MDDVPC Trigger: ACAAGGTACGTCGTCCATTCATATTATTCTGAGAGA...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | CTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGACTGGGCTGGCTCGTaGGTTTTCTCCAGGAGGTCC | + |
Preference number: 4 (lower is better) Translates to: LTLHKIKRTLSKEREGQRDWAGS*VFSRRS Trigger: GGACCTCCTGGAGAAAACTCACGAGCCAGCCCAGTC...CCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | CACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGATCGGTTTTGCAAGTCTaGCAAGATATCTTCCTTTTT | + |
Preference number: 4 (lower is better) Translates to: HSVKRGKASGVPQELSSRSVLQV*QDIFLF Trigger: AAAAAGGAAGATATCTTGGCAGACTTGCAAAACCGA...TCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | ACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGATATCTATCTTTTCTTaGTCACGGATTTCTTTGCGC | + |
Preference number: 4 (lower is better) Translates to: TLSKEREGQRGPPGAVFEISIFS*SRISLR Trigger: GCGCAAAGAAATCCGTGAGCAAGAAAAGATAGATAT...CTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTGGAACAAGTAACTGTTaGTTCATATTCTTTTTGCCC | + |
Preference number: 4 (lower is better) Translates to: VKRGKASGVPQELSSRVFGTSNC*FIFFLP Trigger: GGGCAAAAAGAATATGAAGCAACAGTTACTTGTTCC...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTACATCGATTCTTTATTaGTGTCTGGTTCAAGGAGAA | + |
Preference number: 4 (lower is better) Translates to: VKRGKASGVPQELSSRVFTSILY*CLVQGE Trigger: TTCTCCTTGAACCAGACAGCAATAAAGAATCGATGT...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | CTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGCAGGGACCAGTGTCCTaGCGTGTACCTTTTCGGTCC | + |
Preference number: 4 (lower is better) Translates to: LTLHKIKRTLSKEREGQRQGPVS*RVPFRS Trigger: GGACCGAAAAGGTACACGGCAGGACACTGGTCCCTG...CCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTGTGATTACTTTCCTATaGCCATTTTCAATGGAAGAC | + |
Preference number: 4 (lower is better) Translates to: VKRGKASGVPQELSSRVFVITFL*PFSMED Trigger: GTCTTCCATTGAAAATGGCCATAGGAAAGTAATCAC...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | CTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGCTACGGCTATAAACTaGTGCTTAGAGGAGAAGGTC | + |
Preference number: 4 (lower is better) Translates to: LTLHKIKRTLSKEREGQRATAIN*CLEEKV Trigger: GACCTTCTCCTCTAAGCAGCAGTTTATAGCCGTAGC...CCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | CTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGCATCTACTCGACAGTTaGATATTTCCTGGGTCTTGG | + |
Preference number: 4 (lower is better) Translates to: LTLHKIKRTLSKEREGQRHLLDS*IFPGSW Trigger: CCAAGACCCAGGAAATATTCAACTGTCGAGTAGATG...CCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | CTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGAGCTTGGTTGGACAGTaGTCTAAACTTGTATCACCC | + |
Preference number: 4 (lower is better) Translates to: LTLHKIKRTLSKEREGQRSLVGQ*SKLVSP Trigger: GGGTGATACAAGTTTAGACCACTGTCCAACCAAGCT...CCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | TCAGCTTGCTATCTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGCGCCCAGGCTCAGCTTaGTTGGACAGTGGTCTAAAC | + |
Preference number: 4 (lower is better) Translates to: SACYLTLHKIKRTLSKERRPGSA*LDSGLN Trigger: GTTTAGACCACTGTCCAACCAAGCTGAGCCTGGGCG...CCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAGATAGCAAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | CTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGCGCTTTCCTGATTCCTaGACAGATTCTTCCTCAATT | + |
Preference number: 4 (lower is better) Translates to: LTLHKIKRTLSKEREGQRRFPDS*TDSSSI Trigger: AATTGAGGAAGAATCTGTCCAGGAATCAGGAAAGCG...CCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | CTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGTTCAATGGAAGACACTaGACAGTGTCTGATGTACAT | + |
Preference number: 4 (lower is better) Translates to: LTLHKIKRTLSKEREGQRFNGRH*TVSDVH Trigger: ATGTACATCAGACACTGTGCAGTGTCTTCCATTGAA...CCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | TCAGCTTGCTATCTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGTTCTCCATGGTGTTGTaGAGGTCTGTAAAGGACTGG | + |
Preference number: 4 (lower is better) Translates to: SACYLTLHKIKRTLSKERFSMVL*RSVKDW Trigger: CCAGTCCTTTACAGACCTTCACAACACCATGGAGAA...CCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAGATAGCAAGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | TCAGCTTGCTATCTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAGCATGTGACGAGCTaGCAATTTATTCCACTTCGG | + |
Preference number: 4 (lower is better) Translates to: SACYLTLHKIKRTLSKEREHVTS*QFIPLR Trigger: CCGAAGTGGAATAAATTGTCAGCTCGTCACATGCTC...CCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAGATAGCAAGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CCA 90 bp | TCAGCTTGCTATCTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGTCTTTTTACTTCTGTaGCCGCCCGTCTTGATGTTC | + |
Preference number: 4 (lower is better) Translates to: SACYLTLHKIKRTLSKERVFLLL*PPVLMF Trigger: GAACATCAAGACGGGCGGCCACAGAAGTAAAAAGAC...CCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAGATAGCAAGCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR TCA 90 bp | TCAGCTTGCTATCTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGCCAGTGTATATCCGTaGTTACTTTCCTATGGCCAT | + |
Preference number: 4 (lower is better) Translates to: SACYLTLHKIKRTLSKERASVYP*LLSYGH Trigger: ATGGCCATAGGAAAGTAATCACGGATATACACTGGC...CCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAGATAGCAAGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR GCA 90 bp | TCAGCTTGCTATCTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGACGTACCTTGTATTTTaGAAAGAAAAGGGTCTTCGC | + |
Preference number: 4 (lower is better) Translates to: SACYLTLHKIKRTLSKERTYLVF*KEKGLR Trigger: GCGAAGACCCTTTTCTTTGCAAAATACAAGGTACGT...CCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAGATAGCAAGCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 90 bp | TCGGCCGATGTAGAACACTCCAGGCCTCGTCAGGGACCAGTGTCCTaGCGTGTACCTTTTCGGTCCGCAGCACGTTTGAAGGAGCGGTCC | + |
Preference number: 5 (lower is better) Translates to: SADVEHSRPRQGPVS*RVPFRSAARLKERS Trigger: GGACCGCTCCTTCAAACGTGCTGCGGACCGAAAAGGTACACGGCAGGACACTGGTCCCTGACGAGGCCTGGAGTGTTCTACATCGGCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | ACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGCCCTTTTTCTGGCCCTaGGGGCTCTTCGGTGGCTTG | + |
Preference number: 5 (lower is better) Translates to: TLSKEREGQRGPPGAVFEPFFWP*GLFGGL Trigger: CAAGCCACCGAAGAGCCCCAAGGGCCAGAAAAAGGG...CTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 90 bp | AGGGACCAGTGTCCTGCCGTGTACCTTTTCGGTCCGCAGCACGTTTaGAGGAGCGGTCCCGTCATGACCTCCTCCTTCCAGATAGCCACA | + |
Preference number: 5 (lower is better) Translates to: RDQCPAVYLFGPQHV*RSGPVMTSSFQIAT Trigger: TGTGGCTATCTGGAAGGAGGAGGTCATGACGGGACCGCTCCTTCAAACGTGCTGCGGACCGAAAAGGTACACGGCAGGACACTGGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | ACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGCTCCTTGGGCTCTTCTaGTTCCTCTGGCACTTCTGG | + |
Preference number: 5 (lower is better) Translates to: TLSKEREGQRGPPGAVFELLGLF*FLWHFW Trigger: CCAGAAGTGCCAGAGGAACAAGAAGAGCCCAAGGAG...CTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | CACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGACCAGGCTCAGCTTGGTaGGACAGTGGTCTAAACTTG | + |
Preference number: 5 (lower is better) Translates to: HSVKRGKASGVPQELSSRPGSAW*DSGLNL Trigger: CAAGTTTAGACCACTGTCCAACCAAGCTGAGCCTGG...TCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTTCGCCCAGGCTCAGCTaGGTTGGACAGTGGTCTAAA | + |
Preference number: 5 (lower is better) Translates to: VKRGKASGVPQELSSRVFSPRLS*VGQWSK Trigger: TTTAGACCACTGTCCAACCAAGCTGAGCCTGGGCGA...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 90 bp | ACTTCTGTGGCCGCCCGTCTTGATGTTCTCTATGCGGTCCGCGTGTaGCGTGATATCCCACAAGACGATCTGTCCGTTAATGCAGCCTCC | + |
Preference number: 5 (lower is better) Translates to: TSVAARLDVLYAVRV*RDIPQDDLSVNAAS Trigger: GGAGGCTGCATTAACGGACAGATCGTCTTGTGGGATATCACGGCACACGCGGACCGCATAGAGAACATCAAGACGGGCGGCCACAGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | AAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTGCGTGCTTGTGTCCTaGACTTCAGCAATGACTTGC | + |
Preference number: 5 (lower is better) Translates to: KRTLSKEREGQRGPPGAVCVLVS*TSAMTC Trigger: GCAAGTCATTGCTGAAGTCAAGGACACAAGCACGCA...GACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 90 bp | GTGGTTGCTGCTGAGGCTGCAGCTGCAGCTGTGACTGCAGGTTTTTaGGGCCGGATATCCCAAAAACAAATCGTGCAGTCTGCTGAGCAT | + |
Preference number: 5 (lower is better) Translates to: VVAAEAAAAAVTAGF*GRISQKQIVQSAEH Trigger: ATGCTCAGCAGACTGCACGATTTGTTTTTGGGATATCCGGCCCCAAAAACCTGCAGTCACAGCTGCAGCTGCAGCCTCAGCAGCAACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 90 bp | GATCTGTCCGTTAATGCAGCCTCCGGCGATGATATTGGGGTCACTTaGACAGAACTCGAAGCAGAAGATGTCATCCGGGCTCTCCAGCAT | + |
Preference number: 5 (lower is better) Translates to: DLSVNAASGDDIGVT*TELEAEDVIRALQH Trigger: ATGCTGGAGAGCCCGGATGACATCTTCTGCTTCGAGTTCTGTCCAAGTGACCCCAATATCATCGCCGGAGGCTGCATTAACGGACAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | ACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGGAGAAACATGGGCTaGAGAGAGGTCTTTTTACTT | + |
Preference number: 5 (lower is better) Translates to: TLSKEREGQRGPPGAVFERRNMG*REVFLL Trigger: AAGTAAAAAGACCTCTCTCAAGCCCATGTTTCTCCT...CTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 90 bp | GCTTTCCTGATTCCTGGACAGATTCTTCCTCAATTTCTTTCTCGCTaGCCAGCGACACCCATGGCTTGGAGACGGGAGGATTGTAGACGT | + |
Preference number: 5 (lower is better) Translates to: AFLIPGQILPQFLSR*PATPMAWRREDCRR Trigger: ACGTCTACAATCCTCCCGTCTCCAAGCCATGGGTGTCGCTGGGCAGCGAGAAAGAAATTGAGGAAGAATCTGTCCAGGAATCAGGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | ACACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGCTTGTGGACACATTGTaGAAAAAGTCGACCAAAGAT | + |
Preference number: 5 (lower is better) Translates to: TLSKEREGQRGPPGAVFELVDTL*KKSTKD Trigger: ATCTTTGGTCGACTTTTTCAACAATGTGTCCACAAG...CTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTGACGTACCTTGTATTTaGCAAAGAAAAGGGTCTTCG | + |
Preference number: 5 (lower is better) Translates to: VKRGKASGVPQELSSRVFDVPCI*QRKGSS Trigger: CGAAGACCCTTTTCTTTGCAAAATACAAGGTACGTC...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | CACTCAGTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGACATATCTATCTTTTCTaGCTCACGGATTTCTTTGCG | + |
Preference number: 5 (lower is better) Translates to: HSVKRGKASGVPQELSSRHIYLF*LTDFFA Trigger: CGCAAAGAAATCCGTGAGCAAGAAAAGATAGATATG...TCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTACTGAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | GTAAAGAGAGGGAAGGCCAGCGGGGTCCCCCAGGAGCTGTCTTCGAGAGTCTTTCCTCCATTTGCTCTTTaGTCTTTTGATAGATTTTCG | + |
Preference number: 5 (lower is better) Translates to: VKRGKASGVPQELSSRVFPPFAL*SFDRFS Trigger: CGAAAATCTATCAAAAGACAAAAGAGCAAATGGAGG...AAAGACTCTCGAAGACAGCTCCTGGGGGACCCCGCTGGCCTTCCCTCTCTTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 90 bp | GGGGCCGGATATCCCAAAAACAAATCGTGCAGTCTGCTGAGCATGTaGCGAGCTGACAATTTATTCCACTTCGGTTCTCAAAGACGGATC | + |
Preference number: 5 (lower is better) Translates to: GAGYPKNKSCSLLSM*RADNLFHFGSQRRI Trigger: GATCCGTCTTTGAGAACCGAAGTGGAATAAATTGTCAGCTCGTCACATGCTCAGCAGACTGCACGATTTGTTTTTGGGATATCCGGCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 90 bp | TTTGATGTAGGTGATCATGGTGATGCAGATATTCTGGGACTGGGCTaGCTCGTGAGTTTTCTCCAGGAGGTCCCAGATATCGACATTTCC | + |
Preference number: 5 (lower is better) Translates to: FDVGDHGDADILGLG*LVSFLQEVPDIDIS Trigger: GGAAATGTCGATATCTGGGACCTCCTGGAGAAAACTCACGAGCCAGCCCAGTCCCAGAATATCTGCATCACCATGATCACCTACATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 90 bp | TTCGCTTTCTTCTTCACCAGTTCCAGGGCCATATCTATCTTTTCTTaGTCACGGATTTCTTTGCGCTGCTGGACGTATTCCAGGTGTCTG | + |
Preference number: 5 (lower is better) Translates to: FAFFFTSSRAISIFS*SRISLRCWTYSRCL Trigger: CAGACACCTGGAATACGTCCAGCAGCGCAAAGAAATCCGTGAGCAAGAAAAGATAGATATGGCCCTGGAACTGGTGAAGAAGAAAGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 90 bp | GCGAGGTTCTTCCAGTCGTCGATAAACGTGTTCATGATCTCATTCTaGTGCAGGGCTACTTCAACGCTTGTGGACACATTGTTGAAAAAG | + |
Preference number: 5 (lower is better) Translates to: ARFFQSSINVFMISF*CRATSTLVDTLLKK Trigger: CTTTTTCAACAATGTGTCCACAAGCGTTGAAGTAGCCCTGCAGCAGAATGAGATCATGAACACGTTTATCGACGACTGGAAGAACCTCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 90 bp | ATATCCCAAAAACAAATCGTGCAGTCTGCTGAGCATGTGACGAGCTaGCAATTTATTCCACTTCGGTTCTCAAAGACGGATCCCATCCTG | + |
Preference number: 5 (lower is better) Translates to: ISQKQIVQSAEHVTS*QFIPLRFSKTDPIL Trigger: CAGGATGGGATCCGTCTTTGAGAACCGAAGTGGAATAAATTGTCAGCTCGTCACATGCTCAGCAGACTGCACGATTTGTTTTTGGGATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 90 bp | AGGTTCTTCCAGTCGTCGATAAACGTGTTCATGATCTCATTCTGCTaGAGGGCTACTTCAACGCTTGTGGACACATTGTTGAAAAAGTCG | + |
Preference number: 5 (lower is better) Translates to: RFFQSSINVFMISFC*RATSTLVDTLLKKS Trigger: CGACTTTTTCAACAATGTGTCCACAAGCGTTGAAGTAGCCCTGCAGCAGAATGAGATCATGAACACGTTTATCGACGACTGGAAGAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 90 bp | TCGAATGAGTCGGGCAGCCAGTGTATATCCGTGATTACTTTCCTATaGCCATTTTCAATGGAAGACACTGCACAGTGTCTGATGTACATC | + |
Preference number: 5 (lower is better) Translates to: SNESGSQCISVITFL*PFSMEDTAQCLMYI Trigger: GATGTACATCAGACACTGTGCAGTGTCTTCCATTGAAAATGGCCATAGGAAAGTAATCACGGATATACACTGGCTGCCCGACTCATTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 90 bp | TTGCAAAGAAAAGGGTCTTCGCCCAGGCTCAGCTTGGTTGGACAGTaGTCTAAACTTGTATCACCCTTAGACAGTTTTAATCTAGACAGG | + |
Preference number: 5 (lower is better) Translates to: LQRKGSSPRLSLVGQ*SKLVSPLDSFNLDR Trigger: CCTGTCTAGATTAAAACTGTCTAAGGGTGATACAAGTTTAGACCACTGTCCAACCAAGCTGAGCCTGGGCGAAGACCCTTTTCTTTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | TCAGCTTGCTATCTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGACGTACACGTCTTCTaGGACGTGCTCCTTGGGCTC | + |
Preference number: 5 (lower is better) Translates to: SACYLTLHKIKRTLSKERDVHVF*DVLLGL Trigger: GAGCCCAAGGAGCACGTCCAAGAAGACGTGTACGTC...CCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAGATAGCAAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 90 bp | GTAGGCATCTTTTACGCTAGAGGCATTCTGGTCACTGAAAGTCACTaGTGCACCAAATTCACTCCGTTTTCTAGAAATCATGTAGGTCAC | + |
Preference number: 5 (lower is better) Translates to: VGIFYARGILVTESH*CTKFTPFSRNHVGH Trigger: GTGACCTACATGATTTCTAGAAAACGGAGTGAATTTGGTGCACCAGTGACTTTCAGTGACCAGAATGCCTCTAGCGTAAAAGATGCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 90 bp | TTTGACTGGGTGGAAGTCAGATACTGCGGCTCGGTTTTGCAAGTCTaGCAAGATATCTTCCTTTTTGATAAGCTTATACGTTTGTTCGTC | + |
Preference number: 5 (lower is better) Translates to: FDWVEVRYCGSVLQV*QDIFLFDKLIRLFV Trigger: GACGAACAAACGTATAAGCTTATCAAAAAGGAAGATATCTTGGCAGACTTGCAAAACCGAGCCGCAGTATCTGACTTCCACCCAGTCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | CTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGTGCTTCATATTCTTTTaGCCCTTTTTCTGGCCCTTG | + |
Preference number: 5 (lower is better) Translates to: LTLHKIKRTLSKEREGQRCFIFF*PFFWPL Trigger: CAAGGGCCAGAAAAAGGGCAAAAAGAATATGAAGCA...CCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | TCAGCTTGCTATCTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGTGCTCACGGATTTCTTaGCGCTGCTGGACGTATTCC | + |
Preference number: 5 (lower is better) Translates to: SACYLTLHKIKRTLSKERCSRIS*RCWTYS Trigger: GGAATACGTCCAGCAGCGCAAAGAAATCCGTGAGCA...CCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAGATAGCAAGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | CTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGAATGGACGACGTACCTaGTATTTTGCAAAGAAAAGG | + |
Preference number: 5 (lower is better) Translates to: LTLHKIKRTLSKEREGQRNGRRT*YFAKKR Trigger: CCTTTTCTTTGCAAAATACAAGGTACGTCGTCCATT...CCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | CTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGGAAGGCCAGCGGGATAAGCTTATACGTTaGTTCGTCTGTCATATCTTC | + |
Preference number: 5 (lower is better) Translates to: LTLHKIKRTLSKEREGQRDKLIR*FVCHIF Trigger: GAAGATATGACAGACGAACAAACGTATAAGCTTATC...CCGCTGGCCTTCCCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 90 bp | TTACTTTCCTATGGCCATTTTCAATGGAAGACACTGCACAGTGTCTaGTGTACATCGATTCTTTATTGCTGTCTGGTTCAAGGAGAAACA | + |
Preference number: 5 (lower is better) Translates to: LLSYGHFQWKTLHSV*CTSILYCCLVQGET Trigger: TGTTTCTCCTTGAACCAGACAGCAATAAAGAATCGATGTACATCAGACACTGTGCAGTGTCTTCCATTGAAAATGGCCATAGGAAAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 90 bp | TATATCCGTGATTACTTTCCTATGGCCATTTTCAATGGAAGACACTaGACAGTGTCTGATGTACATCGATTCTTTATTGCTGTCTGGTTC | + |
Preference number: 5 (lower is better) Translates to: YIRDYFPMAIFNGRH*TVSDVHRFFIAVWF Trigger: GAACCAGACAGCAATAAAGAATCGATGTACATCAGACACTGTGCAGTGTCTTCCATTGAAAATGGCCATAGGAAAGTAATCACGGATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS-3UTR CAA 90 bp | TCAGCTTGCTATCTTACCTTACATAAAATAAAACGCACACTCAGTAAAGAGAGGTACATCGATTCTTTATaGCTGTCTGGTTCAAGGAGA | + |
Preference number: 5 (lower is better) Translates to: SACYLTLHKIKRTLSKERYIDSL*LSGSRR Trigger: TCTCCTTGAACCAGACAGCAATAAAGAATCGATGTA...CCTCTCTTTACTGAGTGTGCGTTTTATTTTATGTAAGGTAAGATAGCAAGCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | CAGGGACCAGTGTCCTGCCGTGTACCTTTTCGGTCCGCAGCACGTTaGAAGGAGCGGTCCCGTCATGACCTCCTCCTTCCAGATAGCCAC | + |
Preference number: 6 (lower is better) Translates to: QGPVSCRVPFRSAAR*KERSRHDLLLPDSH Trigger: GTGGCTATCTGGAAGGAGGAGGTCATGACGGGACCGCTCCTTCAAACGTGCTGCGGACCGAAAAGGTACACGGCAGGACACTGGTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 72 bp | TGTCCTGCCGTGTACCTTTTCGGTCCGCAGCACGTTTaGAGGAGCGGTCCCGTCATGACCTCCTCCTTCCAG | + |
Preference number: 6 (lower is better) Translates to: CPAVYLFGPQHV*RSGPVMTSSFQ Trigger: CTGGAAGGAGGAGGTCATGACGGGACCGCTCCTTCAAACGTGCTGCGGACCGAAAAGGTACACGGCAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | GTGTCCTGCCGTGTACCTTTTCGGTCCGCAGCACGTTaGAAGGAGCGGTCCCGTCATGACCTCCTCCTTCCA | + |
Preference number: 6 (lower is better) Translates to: VSCRVPFRSAAR*KERSRHDLLLP Trigger: TGGAAGGAGGAGGTCATGACGGGACCGCTCCTTCAAACGTGCTGCGGACCGAAAAGGTACACGGCAGGACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 72 bp | GTAGAACACTCCAGGCCTCGTCAGGGACCAGTGTCCTaGCGTGTACCTTTTCGGTCCGCAGCACGTTTGAAG | + |
Preference number: 6 (lower is better) Translates to: VEHSRPRQGPVS*RVPFRSAARLK Trigger: CTTCAAACGTGCTGCGGACCGAAAAGGTACACGGCAGGACACTGGTCCCTGACGAGGCCTGGAGTGTTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 72 bp | TCTCTACCGGTGATTGCTGGGAGTTTGCGTTGTTGGTaGCTGTGGTTGCTGCTGAGGCTGCAGCTGCAGCTG | + |
Preference number: 6 (lower is better) Translates to: SLPVIAGSLRCW*LWLLLRLQLQL Trigger: CAGCTGCAGCTGCAGCCTCAGCAGCAACCACAGCCACCAACAACGCAAACTCCCAGCAATCACCGGTAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 72 bp | AAGCAGAAGATGTCATCCGGGCTCTCCAGCATCAACTaGGGGTGGATGGGGTCGGAGAAGCTCCAGAAGAGG | + |
Preference number: 6 (lower is better) Translates to: KQKMSSGLSSIN*GWMGSEKLQKR Trigger: CCTCTTCTGGAGCTTCTCCGACCCCATCCACCCTCAGTTGATGCTGGAGAGCCCGGATGACATCTTCTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 72 bp | TCTTCTCTACCGGTGATTGCTGGGAGTTTGCGTTGTTaGTGGCTGTGGTTGCTGCTGAGGCTGCAGCTGCAG | + |
Preference number: 6 (lower is better) Translates to: SSLPVIAGSLRC*WLWLLLRLQLQ Trigger: CTGCAGCTGCAGCCTCAGCAGCAACCACAGCCACCAACAACGCAAACTCCCAGCAATCACCGGTAGAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 72 bp | ACTCCTTCAGATGGGTGTCAGTCTTGTCCCCAAAGGTaGTCTCCTCCTCTGCGAGGTTCTTCCAGTCGTCGA | + |
Preference number: 6 (lower is better) Translates to: TPSDGCQSCPQR*SPPLRGSSSRR Trigger: TCGACGACTGGAAGAACCTCGCAGAGGAGGAGAGCACCTTTGGGGACAAGACTGACACCCATCTGAAGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 72 bp | GCCGCCCGTCTTGATGTTCTCTATGCGGTCCGCGTGTaGCGTGATATCCCACAAGACGATCTGTCCGTTAAT | + |
Preference number: 6 (lower is better) Translates to: AARLDVLYAVRV*RDIPQDDLSVN Trigger: ATTAACGGACAGATCGTCTTGTGGGATATCACGGCACACGCGGACCGCATAGAGAACATCAAGACGGGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | TTCCAGATAGCCACATTCCATCCCCCAACAGTGAGGACGATGTCATaGAAGAAAGGCGACCTCTGGATGGTGTGGACAGCCCCATCGTGG | + |
Preference number: 6 (lower is better) Translates to: FQIATFHPPTVRTMS*KKGDLWMVWTAPSW Trigger: CCACGATGGGGCTGTCCACACCATCCAGAGGTCGCCTTTCTTCAATGACATCGTCCTCACTGTTGGGGGATGGAATGTGGCTATCTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 72 bp | GCTGAGGCTGCAGCTGCAGCTGTGACTGCAGGTTTTTaGGGCCGGATATCCCAAAAACAAATCGTGCAGTCT | + |
Preference number: 6 (lower is better) Translates to: AEAAAAAVTAGF*GRISQKQIVQS Trigger: AGACTGCACGATTTGTTTTTGGGATATCCGGCCCCAAAAACCTGCAGTCACAGCTGCAGCTGCAGCCTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | TTCTTCTTCTCTACCGGTGATTGCTGGGAGTTTGCGTaGTTGGTGGCTGTGGTTGCTGCTGAGGCTGCAGCT | + |
Preference number: 6 (lower is better) Translates to: FFFSTGDCWEFA*LVAVVAAEAAA Trigger: AGCTGCAGCCTCAGCAGCAACCACAGCCACCAACAACGCAAACTCCCAGCAATCACCGGTAGAGAAGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | TCCCACAAGACGATCTGTCCGTTAATGCAGCCTCCGGCGATGATATaGGGGTCACTTGGACAGAACTCGAAGCAGAAGATGTCATCCGGG | + |
Preference number: 6 (lower is better) Translates to: SHKTICPLMQPPAMI*GSLGQNSKQKMSSG Trigger: CCCGGATGACATCTTCTGCTTCGAGTTCTGTCCAAGTGACCCCAATATCATCGCCGGAGGCTGCATTAACGGACAGATCGTCTTGTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | AACATGGGCTTGAGAGAGGTCTTTTTACTTCTGTGGCCGCCCGTCTaGATGTTCTCTATGCGGTCCGCGTGTGCCGTGATATCCCACAAG | + |
Preference number: 6 (lower is better) Translates to: NMGLREVFLLLWPPV*MFSMRSACAVISHK Trigger: CTTGTGGGATATCACGGCACACGCGGACCGCATAGAGAACATCAAGACGGGCGGCCACAGAAGTAAAAAGACCTCTCTCAAGCCCATGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | TCTTCTTTCTTCTTCTCTACCGGTGATTGCTGGGAGTTTGCGTTGTaGGTGGCTGTGGTTGCTGCTGAGGCTGCAGCTGCAGCTGTGACT | + |
Preference number: 6 (lower is better) Translates to: SSFFFSTGDCWEFAL*VAVVAAEAAAAAVT Trigger: AGTCACAGCTGCAGCTGCAGCCTCAGCAGCAACCACAGCCACCAACAACGCAAACTCCCAGCAATCACCGGTAGAGAAGAAGAAAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 72 bp | ATTCCTGGACAGATTCTTCCTCAATTTCTTTCTCGCTaGCCAGCGACACCCATGGCTTGGAGACGGGAGGAT | + |
Preference number: 6 (lower is better) Translates to: IPGQILPQFLSR*PATPMAWRRED Trigger: ATCCTCCCGTCTCCAAGCCATGGGTGTCGCTGGGCAGCGAGAAAGAAATTGAGGAAGAATCTGTCCAGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 72 bp | GCCACAGACACGACTATGAGCCCGAAGATGGTCGGGTaGCAAGAGACACAGGTAATCATTTTCTCCATGGTG | + |
Preference number: 6 (lower is better) Translates to: ATDTTMSPKMVG*QETQVIIFSMV Trigger: CACCATGGAGAAAATGATTACCTGTGTCTCTTGGCACCCGACCATCTTCGGGCTCATAGTCGTGTCTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 72 bp | GTTAATGCAGCCTCCGGCGATGATATTGGGGTCACTTaGACAGAACTCGAAGCAGAAGATGTCATCCGGGCT | + |
Preference number: 6 (lower is better) Translates to: VNAASGDDIGVT*TELEAEDVIRA Trigger: AGCCCGGATGACATCTTCTGCTTCGAGTTCTGTCCAAGTGACCCCAATATCATCGCCGGAGGCTGCATTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 72 bp | GGTGATCATGGTGATGCAGATATTCTGGGACTGGGCTaGCTCGTGAGTTTTCTCCAGGAGGTCCCAGATATC | + |
Preference number: 6 (lower is better) Translates to: GDHGDADILGLG*LVSFLQEVPDI Trigger: GATATCTGGGACCTCCTGGAGAAAACTCACGAGCCAGCCCAGTCCCAGAATATCTGCATCACCATGATCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | CTTCTTTCTTCTTCTCTACCGGTGATTGCTGGGAGTTaGCGTTGTTGGTGGCTGTGGTTGCTGCTGAGGCTG | + |
Preference number: 6 (lower is better) Translates to: LLSSSLPVIAGS*RCWWLWLLLRL Trigger: CAGCCTCAGCAGCAACCACAGCCACCAACAACGCAAACTCCCAGCAATCACCGGTAGAGAAGAAGAAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | TTTTCTTCTTTCTTCTTCTCTACCGGTGATTGCTGGGAGTTTGCGTaGTTGGTGGCTGTGGTTGCTGCTGAGGCTGCAGCTGCAGCTGTG | + |
Preference number: 6 (lower is better) Translates to: FSSFFFSTGDCWEFA*LVAVVAAEAAAAAV Trigger: CACAGCTGCAGCTGCAGCCTCAGCAGCAACCACAGCCACCAACAACGCAAACTCCCAGCAATCACCGGTAGAGAAGAAGAAAGAAGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | CAATGTTTTCTTCTTTCTTCTTCTCTACCGGTGATTGCTGGGAGTTaGCGTTGTTGGTGGCTGTGGTTGCTGCTGAGGCTGCAGCTGCAG | + |
Preference number: 6 (lower is better) Translates to: QCFLLSSSLPVIAGS*RCWWLWLLLRLQLQ Trigger: CTGCAGCTGCAGCCTCAGCAGCAACCACAGCCACCAACAACGCAAACTCCCAGCAATCACCGGTAGAGAAGAAGAAAGAAGAAAACATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | ACGATCTGTCCGTTAATGCAGCCTCCGGCGATGATATaGGGGTCACTTGGACAGAACTCGAAGCAGAAGATG | + |
Preference number: 6 (lower is better) Translates to: TICPLMQPPAMI*GSLGQNSKQKM Trigger: CATCTTCTGCTTCGAGTTCTGTCCAAGTGACCCCAATATCATCGCCGGAGGCTGCATTAACGGACAGATCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | CCCACGAAGAACTTCGTGCAGAAGTCCTCTATCGGCTaGAGGATATTGGCTATCCCTGCTTCCAGGTTTTGG | + |
Preference number: 6 (lower is better) Translates to: PTKNFVQKSSIG*RILAIPASRFW Trigger: CCAAAACCTGGAAGCAGGGATAGCCAATATCCTCAAGCCGATAGAGGACTTCTGCACGAAGTTCTTCGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 72 bp | CCACGAAGAACTTCGTGCAGAAGTCCTCTATCGGCTTaGGGATATTGGCTATCCCTGCTTCCAGGTTTTGGT | + |
Preference number: 6 (lower is better) Translates to: PRRTSCRSPLSA*GYWLSLLPGFG Trigger: ACCAAAACCTGGAAGCAGGGATAGCCAATATCCTCAAGCCGATAGAGGACTTCTGCACGAAGTTCTTCGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 72 bp | ATGGTGATGCAGATATTCTGGGACTGGGCTGGCTCGTaGGTTTTCTCCAGGAGGTCCCAGATATCGACATTT | + |
Preference number: 6 (lower is better) Translates to: MVMQIFWDWAGS*VFSRRSQISTF Trigger: AAATGTCGATATCTGGGACCTCCTGGAGAAAACTCACGAGCCAGCCCAGTCCCAGAATATCTGCATCACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 72 bp | CTTTATTGCTGTCTGGTTCAAGGAGAAACATGGGCTTaGGAGAGGTCTTTTTACTTCTGTGGCCGCCCGTCT | + |
Preference number: 6 (lower is better) Translates to: LYCCLVQGETWA*ERSFYFCGRPS Trigger: AGACGGGCGGCCACAGAAGTAAAAAGACCTCTCTCAAGCCCATGTTTCTCCTTGAACCAGACAGCAATAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 72 bp | GGGCCGGATATCCCAAAAACAAATCGTGCAGTCTGCTaGGCATGTGACGAGCTGACAATTTATTCCACTTCG | + |
Preference number: 6 (lower is better) Translates to: GPDIPKTNRAVC*ACDELTIYSTS Trigger: CGAAGTGGAATAAATTGTCAGCTCGTCACATGCTCAGCAGACTGCACGATTTGTTTTTGGGATATCCGGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | ACCAGTTCCAGGGCCATATCTATCTTTTCTTGCTCACGGATTTCTTaGCGCTGCTGGACGTATTCCAGGTGTCTGACTTCTCTCTCAAAG | + |
Preference number: 6 (lower is better) Translates to: TSSRAISIFSCSRIS*RCWTYSRCLTSLSK Trigger: CTTTGAGAGAGAAGTCAGACACCTGGAATACGTCCAGCAGCGCAAAGAAATCCGTGAGCAAGAAAAGATAGATATGGCCCTGGAACTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | TTTCGCTTTCTTCTTCACCAGTTCCAGGGCCATATCTATCTTTTCTaGCTCACGGATTTCTTTGCGCTGCTGGACGTATTCCAGGTGTCT | + |
Preference number: 6 (lower is better) Translates to: FRFLLHQFQGHIYLF*LTDFFALLDVFQVS Trigger: AGACACCTGGAATACGTCCAGCAGCGCAAAGAAATCCGTGAGCAAGAAAAGATAGATATGGCCCTGGAACTGGTGAAGAAGAAAGCGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 72 bp | CAGTCGTCGATAAACGTGTTCATGATCTCATTCTGCTaGAGGGCTACTTCAACGCTTGTGGACACATTGTTG | + |
Preference number: 6 (lower is better) Translates to: QSSINVFMISFC*RATSTLVDTLL Trigger: CAACAATGTGTCCACAAGCGTTGAAGTAGCCCTGCAGCAGAATGAGATCATGAACACGTTTATCGACGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 72 bp | TTCCAGTCGTCGATAAACGTGTTCATGATCTCATTCTaGTGCAGGGCTACTTCAACGCTTGTGGACACATTG | + |
Preference number: 6 (lower is better) Translates to: FQSSINVFMISF*CRATSTLVDTL Trigger: CAATGTGTCCACAAGCGTTGAAGTAGCCCTGCAGCAGAATGAGATCATGAACACGTTTATCGACGACTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 72 bp | TCGGGCAGCCAGTGTATATCCGTGATTACTTTCCTATaGCCATTTTCAATGGAAGACACTGCACAGTGTCTG | + |
Preference number: 6 (lower is better) Translates to: SGSQCISVITFL*PFSMEDTAQCL Trigger: CAGACACTGTGCAGTGTCTTCCATTGAAAATGGCCATAGGAAAGTAATCACGGATATACACTGGCTGCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 72 bp | ATGTTTTCTTCTTTCTTCTTCTCTACCGGTGATTGCTaGGAGTTTGCGTTGTTGGTGGCTGTGGTTGCTGCT | + |
Preference number: 6 (lower is better) Translates to: MFSSFFFSTGDC*EFALLVAVVAA Trigger: AGCAGCAACCACAGCCACCAACAACGCAAACTCCCAGCAATCACCGGTAGAGAAGAAGAAAGAAGAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | AGGGCCATATCTATCTTTTCTTGCTCACGGATTTCTTaGCGCTGCTGGACGTATTCCAGGTGTCTGACTTCT | + |
Preference number: 6 (lower is better) Translates to: RAISIFSCSRIS*RCWTYSRCLTS Trigger: AGAAGTCAGACACCTGGAATACGTCCAGCAGCGCAAAGAAATCCGTGAGCAAGAAAAGATAGATATGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | TACATCGATTCTTTATTGCTGTCTGGTTCAAGGAGAAACATGGGCTaGAGAGAGGTCTTTTTACTTCTGTGGCCGCCCGTCTTGATGTTC | + |
Preference number: 6 (lower is better) Translates to: YIDSLLLSGSRRNMG*REVFLLLWPPVLMF Trigger: GAACATCAAGACGGGCGGCCACAGAAGTAAAAAGACCTCTCTCAAGCCCATGTTTCTCCTTGAACCAGACAGCAATAAAGAATCGATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 72 bp | TTGACTGGGTGGAAGTCAGATACTGCGGCTCGGTTTTaGAAGTCTGCCAAGATATCTTCCTTTTTGATAAGC | + |
Preference number: 6 (lower is better) Translates to: LTGWKSDTAARF*KSAKISSFLIS Trigger: GCTTATCAAAAAGGAAGATATCTTGGCAGACTTGCAAAACCGAGCCGCAGTATCTGACTTCCACCCAGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 72 bp | TCTATCTTTTCTTGCTCACGGATTTCTTTGCGCTGCTaGACGTATTCCAGGTGTCTGACTTCTCTCTCAAAG | + |
Preference number: 6 (lower is better) Translates to: SIFSCSRISLRC*TYSRCLTSLSK Trigger: CTTTGAGAGAGAAGTCAGACACCTGGAATACGTCCAGCAGCGCAAAGAAATCCGTGAGCAAGAAAAGATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | TTAGGAAAAGCCCATTTTGTCTGCGTGCTTGTGTCCTaGACTTCAGCAATGACTTGCAAGCCGACATCTTTC | + |
Preference number: 6 (lower is better) Translates to: LGKAHFVCVLVS*TSAMTCKPTSF Trigger: GAAAGATGTCGGCTTGCAAGTCATTGCTGAAGTCAAGGACACAAGCACGCAGACAAAATGGGCTTTTCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | ATTTTGCAAAGAAAAGGGTCTTCGCCCAGGCTCAGCTaGGTTGGACAGTGGTCTAAACTTGTATCACCCTTA | + |
Preference number: 6 (lower is better) Translates to: ILQRKGSSPRLS*VGQWSKLVSPL Trigger: TAAGGGTGATACAAGTTTAGACCACTGTCCAACCAAGCTGAGCCTGGGCGAAGACCCTTTTCTTTGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | GTACCTTGTATTTTGCAAAGAAAAGGGTCTTCGCCCAGGCTCAGCTaGGTTGGACAGTGGTCTAAACTTGTATCACCCTTAGACAGTTTT | + |
Preference number: 6 (lower is better) Translates to: VPCILQRKGSSPRLS*VGQWSKLVSPLDSF Trigger: AAAACTGTCTAAGGGTGATACAAGTTTAGACCACTGTCCAACCAAGCTGAGCCTGGGCGAAGACCCTTTTCTTTGCAAAATACAAGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | CTCGTATTCCAACTTCAGCTCGGCCTCCATTTGCTCTTTTGTCTTTaGATAGATTTTCGCTTTCTTCTTCACCAGTTCCAGGGCCATATC | + |
Preference number: 6 (lower is better) Translates to: LVFQLQLGLHLLFCL*IDFRFLLHQFQGHI Trigger: GATATGGCCCTGGAACTGGTGAAGAAGAAAGCGAAAATCTATCAAAAGACAAAAGAGCAAATGGAGGCCGAGCTGAAGTTGGAATACGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 72 bp | CAAGAGACACAGGTAATCATTTTCTCCATGGTGTTGTaGAGGTCTGTAAAGGACTGGTACTCCTTCAGATGG | + |
Preference number: 6 (lower is better) Translates to: QETQVIIFSMVL*RSVKDWYSFRW Trigger: CCATCTGAAGGAGTACCAGTCCTTTACAGACCTTCACAACACCATGGAGAAAATGATTACCTGTGTCTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 72 bp | ATATCTATCTTTTCTTGCTCACGGATTTCTTTGCGCTaGTGGACGTATTCCAGGTGTCTGACTTCTCTCTCA | + |
Preference number: 6 (lower is better) Translates to: ISIFSCSRISLR*WTYSRCLTSLS Trigger: TGAGAGAGAAGTCAGACACCTGGAATACGTCCAGCAGCGCAAAGAAATCCGTGAGCAAGAAAAGATAGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | TTTGACTGGGTGGAAGTCAGATACTGCGGCTCGGTTTaGCAAGTCTGCCAAGATATCTTCCTTTTTGATAAG | + |
Preference number: 6 (lower is better) Translates to: FDWVEVRYCGSV*QVCQDIFLFDK Trigger: CTTATCAAAAAGGAAGATATCTTGGCAGACTTGCAAAACCGAGCCGCAGTATCTGACTTCCACCCAGTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 72 bp | CCGTTTTCTAGAAATCATGTAGGTCACCCGCTTTCCTaGTTCCTGGACAGATTCTTCCTCAATTTCTTTCTC | + |
Preference number: 6 (lower is better) Translates to: PFSRNHVGHPLS*FLDRFFLNFFL Trigger: GAGAAAGAAATTGAGGAAGAATCTGTCCAGGAATCAGGAAAGCGGGTGACCTACATGATTTCTAGAAAACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 72 bp | TATCCCAAAAACAAATCGTGCAGTCTGCTGAGCATGTaGCGAGCTGACAATTTATTCCACTTCGGTTCTCAA | + |
Preference number: 6 (lower is better) Translates to: YPKNKSCSLLSM*RADNLFHFGSQ Trigger: TTGAGAACCGAAGTGGAATAAATTGTCAGCTCGTCACATGCTCAGCAGACTGCACGATTTGTTTTTGGGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS GCA 72 bp | GTGGAAGTCAGATACTGCGGCTCGGTTTTGCAAGTCTaGCAAGATATCTTCCTTTTTGATAAGCTTATACGT | + |
Preference number: 6 (lower is better) Translates to: VEVRYCGSVLQV*QDIFLFDKLIR Trigger: ACGTATAAGCTTATCAAAAAGGAAGATATCTTGGCAGACTTGCAAAACCGAGCCGCAGTATCTGACTTCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | CTTGTCTCTCAGAATAATATGAATGGACGACGTACCTaGTATTTTGCAAAGAAAAGGGTCTTCGCCCAGGCT | + |
Preference number: 6 (lower is better) Translates to: LVSQNNMNGRRT*YFAKKRVFAQA Trigger: AGCCTGGGCGAAGACCCTTTTCTTTGCAAAATACAAGGTACGTCGTCCATTCATATTATTCTGAGAGACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CCA 72 bp | TTTTACGCTAGAGGCATTCTGGTCACTGAAAGTCACTaGTGCACCAAATTCACTCCGTTTTCTAGAAATCAT | + |
Preference number: 6 (lower is better) Translates to: FYARGILVTESH*CTKFTPFSRNH Trigger: ATGATTTCTAGAAAACGGAGTGAATTTGGTGCACCAGTGACTTTCAGTGACCAGAATGCCTCTAGCGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | CGTATTCCAACTTCAGCTCGGCCTCCATTTGCTCTTTaGTCTTTTGATAGATTTTCGCTTTCTTCTTCACCA | + |
Preference number: 6 (lower is better) Translates to: RIPTSARPPFAL*SFDRFSLSSSP Trigger: TGGTGAAGAAGAAAGCGAAAATCTATCAAAAGACAAAAGAGCAAATGGAGGCCGAGCTGAAGTTGGAATACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS TCA 72 bp | TATGGCCATTTTCAATGGAAGACACTGCACAGTGTCTaGTGTACATCGATTCTTTATTGCTGTCTGGTTCAA | + |
Preference number: 6 (lower is better) Translates to: YGHFQWKTLHSV*CTSILYCCLVQ Trigger: TTGAACCAGACAGCAATAAAGAATCGATGTACATCAGACACTGTGCAGTGTCTTCCATTGAAAATGGCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | GTTTGTTCGTCTGTCATATCTTCATCTACTCGACAGTaGAATATTTCCTGGGTCTTGGTAGTTAATACTAGT | + |
Preference number: 6 (lower is better) Translates to: VCSSVISSSTRQ*NISWVLVVNTS Trigger: ACTAGTATTAACTACCAAGACCCAGGAAATATTCAACTGTCGAGTAGATGAAGATATGACAGACGAACAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 90 bp | TTGCAAGTCTGCCAAGATATCTTCCTTTTTGATAAGCTTATACGTTaGTTCGTCTGTCATATCTTCATCTACTCGACAGTTGAATATTTC | + |
Preference number: 6 (lower is better) Translates to: LQVCQDIFLFDKLIR*FVCHIFIYSTVEYF Trigger: GAAATATTCAACTGTCGAGTAGATGAAGATATGACAGACGAACAAACGTATAAGCTTATCAAAAAGGAAGATATCTTGGCAGACTTGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |
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CDS CAA 72 bp | TGCCAAGATATCTTCCTTTTTGATAAGCTTATACGTTaGTTCGTCTGTCATATCTTCATCTACTCGACAGTT | + |
Preference number: 6 (lower is better) Translates to: CQDIFLFDKLIR*FVCHIFIYSTV Trigger: AACTGTCGAGTAGATGAAGATATGACAGACGAACAAACGTATAAGCTTATCAAAAAGGAAGATATCTTGGCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160285.2 |