RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH7C (Mus musculus)

Ensembl gene IDs: ENSMUSG00000101337

Ensembl transcript IDs: ENSMUST00000178395.2, ENSMUST00000189749.7

Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CAAGAGCAGGGAATTTCCGAAGACGAATCCGAAATGCGTCTCCAATaGGACTCATGGCCAGGACCACATGCAGCTGGTTGCGGCAGCGGT +
Preference number: 5 (lower is better)
Translates to: QEQGISEDESEMRLQ*DSWPGPHAAGCGSG
Trigger: ACCGCTGCCGCAACCAGCTGCATGTGGTCCTGGCCATGAGTCCCATTGGAGACGCATTTCGGATTCGTCTTCGGAAATTCCCTGCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp CTGCTGGCAACTTTTAACTGCGGATGCAGTGCCTCCAGCTCACTCTaGATGGTGGCCACCTGGGACGAAGCCGAGTCCAGCTTATCTAAA +
Preference number: 5 (lower is better)
Translates to: LLATFNCGCSASSSL*MVATWDEAESSLSK
Trigger: TTTAGATAAGCTGGACTCGGCTTCGTCCCAGGTGGCCACCATGCAGAGTGAGCTGGAGGCACTGCATCCGCAGTTAAAAGTTGCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp AGAGTCAGAGGGCAACCCAGCGATATTCCAAGCTCGAATCGTCACTaGTTCTCCGAGCGTACCCATAAGAGAGTAGTCATCAGAGCAGGG +
Preference number: 5 (lower is better)
Translates to: RVRGQPSDIPSSNRH*FSERTHKRVVIRAG
Trigger: CCCTGCTCTGATGACTACTCTCTTATGGGTACGCTCGGAGAAGCAGTGACGATTCGAGCTTGGAATATCGCTGGGTTGCCCTCTGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp CTGTCTGTAGTTAGATGTAAAGGCTCCCAGGTAGGCGACAACCCCTaGGGAGATGAGGATATCTCCCGTCAGGTTGATGTACAGATGCCC +
Preference number: 5 (lower is better)
Translates to: LSVVRCKGSQVGDNP*GDEDISRQVDVQMP
Trigger: GGGCATCTGTACATCAACCTGACGGGAGATATCCTCATCTCCTCAGGGGTTGTCGCCTACCTGGGAGCCTTTACATCTAACTACAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp ATCATCATTTCATCAACCTCTCTGCTGGCAACTTTTAACTGCGGATaGAGTGCCTCCAGCTCACTCTGCATGGTGGCCACCTGGGACGAA +
Preference number: 5 (lower is better)
Translates to: IIISSTSLLATFNCG*SASSSLCMVATWDE
Trigger: TTCGTCCCAGGTGGCCACCATGCAGAGTGAGCTGGAGGCACTGCATCCGCAGTTAAAAGTTGCCAGCAGAGAGGTTGATGAAATGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp GAATCTCCAAGCCGAATGCATGTGCTCCCACCCTGCTTGAAGGTCTaGTTCAACAAAAGAGGCTCTAGAATCGGGTCCAGTTCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: ESPSRMHVLPPCLKV*FNKRGSRIGSSSSP
Trigger: GGGAGAAGAACTGGACCCGATTCTAGAGCCTCTTTTGTTGAAGCAGACCTTCAAGCAGGGTGGGAGCACATGCATTCGGCTTGGAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp TCCTCTCTAACTCAACCAACCACTTCTCCACCTGGCCCCTGGCTTTaGCTGTTGAAATGGTATCTACAAGCTCCACGACTTCTCCCTCAC +
Preference number: 5 (lower is better)
Translates to: SSLTQPTTSPPGPWL*LLKWYLQAPRLLPH
Trigger: GTGAGGGAGAAGTCGTGGAGCTTGTAGATACCATTTCAACAGCCAAAGCCAGGGGCCAGGTGGAGAAGTGGTTGGTTGAGTTAGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp AGCTCGCATCCCATAGTCATAGTGATGCTGGGAGGACAGTTGCTCTaGGCACAAGCGGTATGTTGCCACAATCTTTATGGACAGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SSHPIVIVMLGGQLL*AQAVCCHNLYGQWP
Trigger: AGGCCACTGTCCATAAAGATTGTGGCAACATACCGCTTGTGCTCAGAGCAACTGTCCTCCCAGCATCACTATGACTATGGGATGCGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000178395.2
ENSMUST00000189749.7
CDS GCA 90 bp ACAGCAGTTAACAAGAGCAGGGAATTTCCGAAGACGAATCCGAAATaGGTCTCCAATGGGACTCATGGCCAGGACCACATGCAGCTGGTT +
Preference number: 5 (lower is better)
Translates to: TAVNKSREFPKTNPK*VSNGTHGQDHMQLV
Trigger: AACCAGCTGCATGTGGTCCTGGCCATGAGTCCCATTGGAGACGCATTTCGGATTCGTCTTCGGAAATTCCCTGCTCTTGTTAACTGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp GGTTGGTCAGAGGGAAGAATCATGGCAATCACGAAATTTGTAGAGTaGCCAGTGGTGGAGAGTGTGCCCCTCCTCTCGCTTGTCTTATAC +
Preference number: 5 (lower is better)
Translates to: GWSEGRIMAITKFVE*PVVESVPLLSLVLY
Trigger: GTATAAGACAAGCGAGAGGAGGGGCACACTCTCCACCACTGGCCACTCTACAAATTTCGTGATTGCCATGATTCTTCCCTCTGACCAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp ACAAGCGGTATGTTGCCACAATCTTTATGGACAGTGGCCTCGCAGTaGCAAAGCCACAAGAGTACAGCACTATCTCCGCAATCATGGCGT +
Preference number: 5 (lower is better)
Translates to: TSGMLPQSLWTVASQ*QSHKSTALSPQSWR
Trigger: ACGCCATGATTGCGGAGATAGTGCTGTACTCTTGTGGCTTTGTCACTGCGAGGCCACTGTCCATAAAGATTGTGGCAACATACCGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000178395.2
ENSMUST00000189749.7
CDS TCA 90 bp CAATTGTGGAATCTCCAAGCCGAATGCATGTGCTCCCACCCTGCTTaGAGGTCTGCTTCAACAAAAGAGGCTCTAGAATCGGGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: QLWNLQAECMCSHPA*RSASTKEALESGPV
Trigger: AACTGGACCCGATTCTAGAGCCTCTTTTGTTGAAGCAGACCTTCAAGCAGGGTGGGAGCACATGCATTCGGCTTGGAGATTCCACAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp GCTCTAGTTGATTCAGGAGGTTGGGCGATGAGGTCTGTGAAGTCTTaGATGGAGACAAGAATGAGGTCCTGCAGCTGTAAGGTCATGAGT +
Preference number: 5 (lower is better)
Translates to: ALVDSGGWAMRSVKS*METRMRSCSCKVMS
Trigger: ACTCATGACCTTACAGCTGCAGGACCTCATTCTTGTCTCCATGCAAGACTTCACAGACCTCATCGCCCAACCTCCTGAATCAACTAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp TACTCAATTGTGGAATCTCCAAGCCGAATGCATGTGCTCCCACCCTaGTTGAAGGTCTGCTTCAACAAAAGAGGCTCTAGAATCGGGTCC +
Preference number: 5 (lower is better)
Translates to: YSIVESPSRMHVLPP*LKVCFNKRGSRIGS
Trigger: GGACCCGATTCTAGAGCCTCTTTTGTTGAAGCAGACCTTCAAGCAGGGTGGGAGCACATGCATTCGGCTTGGAGATTCCACAATTGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp ATCCCTCCAGGTTTTATCCACAGCTTTGAATCGTCTGCCTTCCTCTaGCATTTGGGACATAATGTCCGGAGAGCTGAAAATGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: IPPGFIHSFESSAFL*HLGHNVRRAENGLQ
Trigger: CTGGAGCCCATTTTCAGCTCTCCGGACATTATGTCCCAAATGCCAGAGGAAGGCAGACGATTCAAAGCTGTGGATAAAACCTGGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp CAACCAACCACTTCTCCACCTGGCCCCTGGCTTTGGCTGTTGAAATaGTATCTACAAGCTCCACGACTTCTCCCTCACTACTCTTCATAT +
Preference number: 5 (lower is better)
Translates to: QPTTSPPGPWLWLLK*YLQAPRLLPHYSSY
Trigger: ATATGAAGAGTAGTGAGGGAGAAGTCGTGGAGCTTGTAGATACCATTTCAACAGCCAAAGCCAGGGGCCAGGTGGAGAAGTGGTTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp ATTATTATCATCATTTCATCAACCTCTCTGCTGGCAACTTTTAACTaGGGATGCAGTGCCTCCAGCTCACTCTGCATGGTGGCCACCTGG +
Preference number: 5 (lower is better)
Translates to: IIIIISSTSLLATFN*GCSASSSLCMVATW
Trigger: CCAGGTGGCCACCATGCAGAGTGAGCTGGAGGCACTGCATCCGCAGTTAAAAGTTGCCAGCAGAGAGGTTGATGAAATGATGATAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp GGCTTCGGCCAAGTCGGCATCACATTCATCTTTGATGGCTTTGGCTaGCATGGCTTGATCGTTCGCTACTGTTTCATCAGCTTTCACAAT +
Preference number: 5 (lower is better)
Translates to: GFGQVGITFIFDGFG*HGLIVRYCFISFHN
Trigger: ATTGTGAAAGCTGATGAAACAGTAGCGAACGATCAAGCCATGGCAGCCAAAGCCATCAAAGATGAATGTGATGCCGACTTGGCCGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp GACTTAATCATAGTCCTCTCTAACTCAACCAACCACTTCTCCACCTaGCCCCTGGCTTTGGCTGTTGAAATGGTATCTACAAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: DLIIVLSNSTNHFST*PLALAVEMVSTSST
Trigger: CGTGGAGCTTGTAGATACCATTTCAACAGCCAAAGCCAGGGGCCAGGTGGAGAAGTGGTTGGTTGAGTTAGAGAGGACTATGATTAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp CTGGTCCTTAGTGATGTCGGCATTGGCATTCATCCCAAAGACTTCTaGTGCTGGGATCAGTGGCAAAGTCTTTGTGTAGTCGATGTAGCT +
Preference number: 5 (lower is better)
Translates to: LVLSDVGIGIHPKDF*CWDQWQSLCVVDVA
Trigger: AGCTACATCGACTACACAAAGACTTTGCCACTGATCCCAGCACCAGAAGTCTTTGGGATGAATGCCAATGCCGACATCACTAAGGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp GACTGGGTAAGGAGAATGTTATCAAACAGCAGCTGCGTCTCCGACTaGTCCTTAGTGATGTCGGCATTGGCATTCATCCCAAAGACTTCT +
Preference number: 5 (lower is better)
Translates to: DWVRRMLSNSSCVSD*SLVMSALAFIPKTS
Trigger: AGAAGTCTTTGGGATGAATGCCAATGCCGACATCACTAAGGACCAGTCGGAGACGCAGCTGCTGTTTGATAACATTCTCCTTACCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp TATACTGATGGGACCCAGCCATACGCCTCCTCTTCTGCATTGAACTaGTCAATCTTGTCTGCTGCTGCATCCAACTTGCTATTTAGCACC +
Preference number: 5 (lower is better)
Translates to: YTDGTQPYASSSALN*SILSAAASNLLFST
Trigger: GGTGCTAAATAGCAAGTTGGATGCAGCAGCAGACAAGATTGATCAGTTCAATGCAGAAGAGGAGGCGTATGGCTGGGTCCCATCAGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp GTCGGCATTGGCATTCATCCCAAAGACTTCTGGTGCTGGGATCAGTaGCAAAGTCTTTGTGTAGTCGATGTAGCTTTTGTGATCACCAGA +
Preference number: 5 (lower is better)
Translates to: VGIGIHPKDFWCWDQ*QSLCVVDVAFVITR
Trigger: TCTGGTGATCACAAAAGCTACATCGACTACACAAAGACTTTGCCACTGATCCCAGCACCAGAAGTCTTTGGGATGAATGCCAATGCCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp AAAGACCTCCTCCATGGCTTTGGCAAGACTTCTATTTCAGCACGGTaGGGTGGGAGTTCAGTTATCTTGCCATCATCGTCTTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: KDLLHGFGKTSISAR*GGSSVILPSSSFSL
Trigger: CAGAGAAAAAGACGATGATGGCAAGATAACTGAACTCCCACCTCACCGTGCTGAAATAGAAGTCTTGCCAAAGCCATGGAGGAGGTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp AAGAACCAGCCTCATGATGAAACCTGGATGTTCAAAAGCTCTAGTTaGTTCAGGAGGTTGGGCGATGAGGTCTGTGAAGTCTTGCATGGA +
Preference number: 5 (lower is better)
Translates to: KNQPHDETWMFKSSS*FRRLGDEVCEVLHG
Trigger: TCCATGCAAGACTTCACAGACCTCATCGCCCAACCTCCTGAATCAACTAGAGCTTTTGAACATCCAGGTTTCATCATGAGGCTGGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp GAGGATATACTGATGGGACCCAGCCATACGCCTCCTCTTCTGCATTaGACTGATCAATCTTGTCTGCTGCTGCATCCAACTTGCTATTTA +
Preference number: 5 (lower is better)
Translates to: EDILMGPSHTPPLLH*TDQSCLLLHPTCYL
Trigger: TAAATAGCAAGTTGGATGCAGCAGCAGACAAGATTGATCAGTTCAATGCAGAAGAGGAGGCGTATGGCTGGGTCCCATCAGTATATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp GATCACTTGGATGAGAGGGATGTACTGCTTGAACTCCTCCACCATTaGTTGCACTTTCTTGGTCATTGCCAGCGCATTTGGAGAATCATG +
Preference number: 5 (lower is better)
Translates to: DHLDERDVLLELLHH*LHFLGHCQRIWRIM
Trigger: CATGATTCTCCAAATGCGCTGGCAATGACCAAGAAAGTGCAATCAATGGTGGAGGAGTTCAAGCAGTACATCCCTCTCATCCAAGTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp TGCTTATTCAACTCAAGTGTGTCTTGGAGTTTGGCCAACTTGTCCTaGACCTCATACAGGGCAGCCTGCTTCTTTCTAAGGCCTTCCATA +
Preference number: 5 (lower is better)
Translates to: CLFNSSVSWSLANLS*TSYRAACFFLRPSI
Trigger: TATGGAAGGCCTTAGAAAGAAGCAGGCTGCCCTGTATGAGGTTCAGGACAAGTTGGCCAAACTCCAAGACACACTTGAGTTGAATAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp GGCAGCTTGGCCTTTTCTTTGCTGGATAGTTTATCCATAGGCAACTaGGGTAGGAATCTCGCTGGCATCTTTGATTTGCCTTTAGTGGAT +
Preference number: 5 (lower is better)
Translates to: GSLAFSLLDSLSIGN*GRNLAGIFDLPLVD
Trigger: ATCCACTAAAGGCAAATCAAAGATGCCAGCGAGATTCCTACCGCAGTTGCCTATGGATAAACTATCCAGCAAAGAAAAGGCCAAGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp TACTATCAAGGCTTGCTTTTCTTCTTCAAGATCTGGCCTTTCCCGTaGCACTACGATTCCCAAAAGTTGATCCTGCATTCCCTCAGGAGT +
Preference number: 5 (lower is better)
Translates to: YYQGLLFFFKIWPFP*HYDSQKLILHSLRS
Trigger: ACTCCTGAGGGAATGCAGGATCAACTTTTGGGAATCGTAGTGGCACGGGAAAGGCCAGATCTTGAAGAAGAAAAGCAAGCCTTGATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp GTCTGGCCTCAAGCAGCGGATAATAAGCATCCTCTGAAAGTCGTTTaGTTTATTTTCCCAATCTTCGGGAAACATCTCATGGTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: VWPQAADNKHPLKVV*FIFPIFGKHLMVWL
Trigger: GAGCCACACCATGAGATGTTTCCCGAAGATTGGGAAAATAAAGCAAACGACTTTCAGAGGATGCTTATTATCCGCTGCTTGAGGCCAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp GTCCTTAGTGATGTCGGCATTGGCATTCATCCCAAAGACTTCTGGTaGTGGGATCAGTGGCAAAGTCTTTGTGTAGTCGATGTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: VLSDVGIGIHPKDFW*WDQWQSLCVVDVAF
Trigger: AAAAGCTACATCGACTACACAAAGACTTTGCCACTGATCCCAGCACCAGAAGTCTTTGGGATGAATGCCAATGCCGACATCACTAAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp ATTGCTGCAGGAATTTTAGTCTTTCGAGGAAGTCATTCACATAGCTaGCTAGTGGCTTCAGGCTTGGGTAGGATTTGCCCATCCACATTG +
Preference number: 5 (lower is better)
Translates to: IAAGILVFRGSHSHS*LVASGLGRICPSTL
Trigger: CAATGTGGATGGGCAAATCCTACCCAAGCCTGAAGCCACTAGGCAGCTATGTGAATGACTTCCTCGAAAGACTAAAATTCCTGCAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp AGATCACTTTCAGATCTTCATGCCACTCATGGCTACCGTAGCCCTTaGAGATTTCCACCTGGAATAGTGAATAATCAGCCATGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: RSLSDLHATHGYRSP*RFPPGIVNNQPCVQ
Trigger: CTGCACACATGGCTGATTATTCACTATTCCAGGTGGAAATCTCCAAGGGCTACGGTAGCCATGAGTGGCATGAAGATCTGAAAGTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp CATCTCTTGGACAAGGACAGTGTTCATGCTCTGAGTGTAGGTTGTTaGGTATCTCCGCATGGCAGCCTCAATATCAAAGTTGTTTGGAAG +
Preference number: 5 (lower is better)
Translates to: HLLDKDSVHALSVGC*VSPHGSLNIKVVWK
Trigger: CTTCCAAACAACTTTGATATTGAGGCTGCCATGCGGAGATACCCAACAACCTACACTCAGAGCATGAACACTGTCCTTGTCCAAGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp ATAAGGGTTCAAAGCATCCTGGATCTTTTTACGTTGAGGATATACTaGTGGGACCCAGCCATACGCCTCCTCTTCTGCATTGAACTGATC +
Preference number: 5 (lower is better)
Translates to: IRVQSILDLFTLRIY*WDPAIRLLFCIELI
Trigger: GATCAGTTCAATGCAGAAGAGGAGGCGTATGGCTGGGTCCCATCAGTATATCCTCAACGTAAAAAGATCCAGGATGCTTTGAACCCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp TTCAGCCTCTCCAGCATTCGCTCGATAGTCACAACTGCCAGGACTTaGTTATCTTGTACAACCGTTTTCATCATATCCCTCCAGGTTTTA +
Preference number: 5 (lower is better)
Translates to: FSLSSIRSIVTTART*LSCTTVFIISLQVL
Trigger: TAAAACCTGGAGGGATATGATGAAAACGGTTGTACAAGATAAGCAAGTCCTGGCAGTTGTGACTATCGAGCGAATGCTGGAGAGGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp GTTGGACTTTTTCAGCCTCTCCAGCATTCGCTCGATAGTCACAACTaGCAGGACTTGCTTATCTTGTACAACCGTTTTCATCATATCCCT +
Preference number: 5 (lower is better)
Translates to: VGLFQPLQHSLDSHN*QDLLILYNRFHHIP
Trigger: AGGGATATGATGAAAACGGTTGTACAAGATAAGCAAGTCCTGGCAGTTGTGACTATCGAGCGAATGCTGGAGAGGCTGAAAAAGTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp TCCTCTCGCTTGTCTTATACAGTGGAGCAACATAACTTGGTCGTTTaGATATGTCTGACTTTTTGCATGGCTTTAGCCACATCACGGGGA +
Preference number: 5 (lower is better)
Translates to: SSRLSYTVEQHNLVV*ICLTFCMALATSRG
Trigger: TCCCCGTGATGTGGCTAAAGCCATGCAAAAAGTCAGACATATCCAAACGACCAAGTTATGTTGCTCCACTGTATAAGACAAGCGAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp AGGAACTCATCAATATCACGCTCAGCTTTTCCAGTAATCAAGAACTaGTACTTGTCATACATTTTGAGGTGCTCGGTTGGTGCCACGCTC +
Preference number: 5 (lower is better)
Translates to: RNSSISRSAFPVIKN*YLSYILRCSVGATL
Trigger: GAGCGTGGCACCAACCGAGCACCTCAAAATGTATGACAAGTATCAGTTCTTGATTACTGGAAAAGCTGAGCGTGATATTGATGAGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp TCTTCAAGATCTGGCCTTTCCCGTGCCACTACGATTCCCAAAAGTTaGTCCTGCATTCCCTCAGGAGTTATCATGAAGTTTAACAATGTG +
Preference number: 5 (lower is better)
Translates to: SSRSGLSRATTIPKS*SCIPSGVIMKFNNV
Trigger: CACATTGTTAAACTTCATGATAACTCCTGAGGGAATGCAGGATCAACTTTTGGGAATCGTAGTGGCACGGGAAAGGCCAGATCTTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp ATTTGTATTGTGGATTTTCAACTAATTCTGTGCAGAAGAATTTGTTaGGAATGCTACGCAGTGTGCGCCGGTCCCAGTCATCAGTCACCC +
Preference number: 5 (lower is better)
Translates to: ICIVDFQLILCRRIC*ECYAVCAGPSHQSP
Trigger: GGGTGACTGATGACTGGGACCGGCGCACACTGCGTAGCATTCTCAACAAATTCTTCTGCACAGAATTAGTTGAAAATCCACAATACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp ATACCGCTCTCATCAATGACATCGGACTCTAAACCACCATCTTGTTaGATAATGACTTTGACAAGGGTGCTTCTGAGATTCTCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: IPLSSMTSDSKPPSC*IMTLTRVLLRFSLS
Trigger: GGAGAGAGAGAATCTCAGAAGCACCCTTGTCAAAGTCATTATGCAACAAGATGGTGGTTTAGAGTCCGATGTCATTGATGAGAGCGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp GTGATTGCGGAACATCTTGGCTATCAGTTTCCCACAGATGATATCTaGTCTCTTCACCAACGATTTGATCAGTTCCTCACAGTGCATTTC +
Preference number: 5 (lower is better)
Translates to: VIAEHLGYQFPTDDI*SLHQRFDQFLTVHF
Trigger: GAAATGCACTGTGAGGAACTGATCAAATCGTTGGTGAAGAGAGCAGATATCATCTGTGGGAAACTGATAGCCAAGATGTTCCGCAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp ACAGTGGAGCAACATAACTTGGTCGTTTGGATATGTCTGACTTTTTaGATGGCTTTAGCCACATCACGGGGACTGTGTCATACAGAACTT +
Preference number: 5 (lower is better)
Translates to: TVEQHNLVVWICLTF*MALATSRGLCHTEL
Trigger: AAGTTCTGTATGACACAGTCCCCGTGATGTGGCTAAAGCCATGCAAAAAGTCAGACATATCCAAACGACCAAGTTATGTTGCTCCACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp ATACAGCCCTCTCCAGTAATTCCCAACATCTGTTTCTACTTGATCTaGGTTCACCTTGTGGTATGGTCCTTCAGTCCACCATTTGTGTTT +
Preference number: 5 (lower is better)
Translates to: IQPSPVIPNICFYLI*VHLVVWSFSPPFVF
Trigger: AAACACAAATGGTGGACTGAAGGACCATACCACAAGGTGAACCCAGATCAAGTAGAAACAGATGTTGGGAATTACTGGAGAGGGCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp TCCGTGGCTGCTTCAAGATTCGAGAAATTCTGCTTATGTGTTCTATaGCAAATCGGAACAAGACGAGGTTCATGGGCTTTTTGCTCATGT +
Preference number: 5 (lower is better)
Translates to: SVAASRFEKFCLCVL*QIGTRRGSWAFCSC
Trigger: ACATGAGCAAAAAGCCCATGAACCTCGTCTTGTTCCGATTTGCCATAGAACACATAAGCAGAATTTCTCGAATCTTGAAGCAGCCACGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp AATGAAAGGGCGTCCCAACTTCTTGATTATGAATTCCTGCAGCATTaGAATAACCTTGTCTGGCCTCAAGCAGCGGATAATAAGCATCCT +
Preference number: 5 (lower is better)
Translates to: NERASQLLDYEFLQH*NNLVWPQAADNKHP
Trigger: AGGATGCTTATTATCCGCTGCTTGAGGCCAGACAAGGTTATTCCAATGCTGCAGGAATTCATAATCAAGAAGTTGGGACGCCCTTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp GGACAGTGTTCATGCTCTGAGTGTAGGTTGTTGGGTATCTCCGCATaGCAGCCTCAATATCAAAGTTGTTTGGAAGTTTACTCAGGATAT +
Preference number: 5 (lower is better)
Translates to: GQCSCSECRLLGISA*QPQYQSCLEVYSGY
Trigger: ATATCCTGAGTAAACTTCCAAACAACTTTGATATTGAGGCTGCCATGCGGAGATACCCAACAACCTACACTCAGAGCATGAACACTGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp AGAAGAAGTCGGTCATTTGCAAATTCATGGTGTGGCAGTTGTCTCTaGTGGCAGCCAGCAGATCATTGTAATCTGGCTTTGGTAATTTCA +
Preference number: 5 (lower is better)
Translates to: RRSRSFANSWCGSCL*WQPADHCNLALVIS
Trigger: TGAAATTACCAAAGCCAGATTACAATGATCTGCTGGCTGCCATCAGAGACAACTGCCACACCATGAATTTGCAAATGACCGACTTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp GGAATAACCTTGTCTGGCCTCAAGCAGCGGATAATAAGCATCCTCTaGAAGTCGTTTGCTTTATTTTCCCAATCTTCGGGAAACATCTCA +
Preference number: 5 (lower is better)
Translates to: GITLSGLKQRIISIL*KSFALFSQSSGNIS
Trigger: TGAGATGTTTCCCGAAGATTGGGAAAATAAAGCAAACGACTTTCAGAGGATGCTTATTATCCGCTGCTTGAGGCCAGACAAGGTTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp GGGTTTTCCTGTTTGATATTTAAATGGAATGATGGAGCAGTCTGCTaGCACTGGTGCTTGACTCCTGTCAAAGTTAACTGTGGTAAGACT +
Preference number: 5 (lower is better)
Translates to: GFSCLIFKWNDGAVC*HWCLTPVKVNCGKT
Trigger: AGTCTTACCACAGTTAACTTTGACAGGAGTCAAGCACCAGTGGCAGCAGACTGCTCCATCATTCCATTTAAATATCAAACAGGAAAACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp TGTGTTCTATGGCAAATCGGAACAAGACGAGGTTCATGGGCTTTTTaGTCATGTTGTTATATTCATCCAGATGGCCTTCGACAATCATCC +
Preference number: 5 (lower is better)
Translates to: CVLWQIGTRRGSWAF*SCCYIHPDGLRQSS
Trigger: GGATGATTGTCGAAGGCCATCTGGATGAATATAACAACATGAGCAAAAAGCCCATGAACCTCGTCTTGTTCCGATTTGCCATAGAACACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp TTCCAGTTCCTGTTGGTCCTACAAATATTGAAGGCTTTTGATGAGTaGTCAGTAAATGCATTAGAGCAGAGTAACGGACTGTGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FQFLLVLQILKAFDE*SVNALEQSNGLCPE
Trigger: CTCTGGACACAGTCCGTTACTCTGCTCTAATGCATTTACTGACCACTCATCAAAAGCCTTCAATATTTGTAGGACCAACAGGAACTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp GGTTGTTGGGTATCTCCGCATGGCAGCCTCAATATCAAAGTTGTTTaGAAGTTTACTCAGGATATCTCCAGCAACCTCATTTACTACTTC +
Preference number: 5 (lower is better)
Translates to: GCWVSPHGSLNIKVV*KFTQDISSNLIYYF
Trigger: GAAGTAGTAAATGAGGTTGCTGGAGATATCCTGAGTAAACTTCCAAACAACTTTGATATTGAGGCTGCCATGCGGAGATACCCAACAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp GAGAGAGGGACCATTCTATCAAACAAGCCTTCTATAAATTCCTTCTaGATGATACTGACTGACTGTGGTAACGTGTTTATCCAGGACACC +
Preference number: 5 (lower is better)
Translates to: ERGTILSNKPSINSF*MILTDCGNVFIQDT
Trigger: GGTGTCCTGGATAAACACGTTACCACAGTCAGTCAGTATCATTCAGAAGGAATTTATAGAAGGCTTGTTTGATAGAATGGTCCCTCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp CATCCATCACTTCATAGTCAAACGCAAGAAGATCAATTGGAATTGTaGATTTTCTCGCATAGTTCTGCTGCGCACCAGTCAGGAAAGCTT +
Preference number: 5 (lower is better)
Translates to: HPSLHSQTQEDQLEL*IFSHSSAAHQSGKL
Trigger: AAGCTTTCCTGACTGGTGCGCAGCAGAACTATGCGAGAAAATTCACAATTCCAATTGATCTTCTTGCGTTTGACTATGAAGTGATGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp ATTGGGTTTTCCTGTTTGATATTTAAATGGAATGATGGAGCAGTCTaGTGCCACTGGTGCTTGACTCCTGTCAAAGTTAACTGTGGTAAG +
Preference number: 5 (lower is better)
Translates to: IGFSCLIFKWNDGAV*CHWCLTPVKVNCGK
Trigger: CTTACCACAGTTAACTTTGACAGGAGTCAAGCACCAGTGGCAGCAGACTGCTCCATCATTCCATTTAAATATCAAACAGGAAAACCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp ATGATATCTGCTCTCTTCACCAACGATTTGATCAGTTCCTCACAGTaGATTTCAAACATTCCCAAACGAACAGCCTTTCGAGATGTGTAC +
Preference number: 5 (lower is better)
Translates to: MISALFTNDLISSSQ*ISNIPKRTAFRDVY
Trigger: GTACACATCTCGAAAGGCTGTTCGTTTGGGAATGTTTGAAATGCACTGTGAGGAACTGATCAAATCGTTGGTGAAGAGAGCAGATATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp TCCTGTTTGATATTTAAATGGAATGATGGAGCAGTCTGCTGCCACTaGTGCTTGACTCCTGTCAAAGTTAACTGTGGTAAGACTGTTGTA +
Preference number: 5 (lower is better)
Translates to: SCLIFKWNDGAVCCH*CLTPVKVNCGKTVV
Trigger: TACAACAGTCTTACCACAGTTAACTTTGACAGGAGTCAAGCACCAGTGGCAGCAGACTGCTCCATCATTCCATTTAAATATCAAACAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp TGCTCATGTTGTTATATTCATCCAGATGGCCTTCGACAATCATCCTaGGAGCATCCACATTTTCAACTTCTCTATAGCCAAAATCTTCCC +
Preference number: 5 (lower is better)
Translates to: CSCCYIHPDGLRQSS*EHPHFQLLYSQNLP
Trigger: GGGAAGATTTTGGCTATAGAGAAGTTGAAAATGTGGATGCTCTCAGGATGATTGTCGAAGGCCATCTGGATGAATATAACAACATGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 90 bp ATCTCATCTGACAAGACCATGATGCTATTAGTCATAACTTTTAGATaGTGTGGAACCAATTGTAATACATGCTCCAGCCAAGAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: ISSDKTMMLLVITFR*CGTNCNTCSSQESS
Trigger: GGAAGACTCTTGGCTGGAGCATGTATTACAATTGGTTCCACAGCATCTAAAAGTTATGACTAATAGCATCATGGTCTTGTCAGATGAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 90 bp TCAGCAAAGTCATCCATAAAACAGTCTATGAGATTCATTAAGGAATaGACCAAGTTTGTATCTGAAGTAGGAGAGAGCTCCTTTGTATGC +
Preference number: 5 (lower is better)
Translates to: SAKSSIKQSMRFIKE*TKFVSEVGESSFVC
Trigger: GCATACAAAGGAGCTCTCTCCTACTTCAGATACAAACTTGGTCCATTCCTTAATGAATCTCATAGACTGTTTTATGGATGACTTTGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 90 bp TTTCGACATAATGATATTCTGAGTTTGGGCTGCTGTAGTTTGGGCTaGGAAGTTAACTATAAGAGGTTTGTAGATGTCCTTATTGAGTTG +
Preference number: 5 (lower is better)
Translates to: FRHNDILSLGCCSLG*EVNYKRFVDVLIEL
Trigger: CAACTCAATAAGGACATCTACAAACCTCTTATAGTTAACTTCTCAGCCCAAACTACAGCAGCCCAAACTCAGAATATCATTATGTCGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TCTCCCGTCAGGTTGATGTACAGATGCCCAAGCTCCAGCGCGGAGTaGCTCCATCGGGTTTTCTCACCTCCCAGGCCCCCGATCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SPVRLMYRCPSSSAE*LHRVFSPPRPPISC
Trigger: GCAGCTGATCGGGGGCCTGGGAGGTGAGAAAACCCGATGGAGCAACTCCGCGCTGGAGCTTGGGCATCTGTACATCAACCTGACGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp TTAACTGCGGATGCAGTGCCTCCAGCTCACTCTGCATaGTGGCCACCTGGGACGAAGCCGAGTCCAGCTTAT +
Preference number: 6 (lower is better)
Translates to: LTADAVPPAHSA*WPPGTKPSPAY
Trigger: ATAAGCTGGACTCGGCTTCGTCCCAGGTGGCCACCATGCAGAGTGAGCTGGAGGCACTGCATCCGCAGTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp TCATCAACCTCTCTGCTGGCAACTTTTAACTGCGGATaGAGTGCCTCCAGCTCACTCTGCATGGTGGCCACC +
Preference number: 6 (lower is better)
Translates to: SSTSLLATFNCG*SASSSLCMVAT
Trigger: GGTGGCCACCATGCAGAGTGAGCTGGAGGCACTGCATCCGCAGTTAAAAGTTGCCAGCAGAGAGGTTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp GAGATGAGGATATCTCCCGTCAGGTTGATGTACAGATaGCCAAGCTCCAGCGCGGAGTTGCTCCATCGGGTT +
Preference number: 6 (lower is better)
Translates to: EMRISPVRLMYR*PSSSAELLHRV
Trigger: AACCCGATGGAGCAACTCCGCGCTGGAGCTTGGGCATCTGTACATCAACCTGACGGGAGATATCCTCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp TCAGGGTATCAAGGGCAGCCAGTGCAGACTCCAGGATaGGTAAGGCTTCGGCCAAGTCGGCATCACATTCAT +
Preference number: 6 (lower is better)
Translates to: SGYQGQPVQTPG*VRLRPSRHHIH
Trigger: ATGAATGTGATGCCGACTTGGCCGAAGCCTTACCCATCCTGGAGTCTGCACTGGCTGCCCTTGATACCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp AATGCGTCTCCAATGGGACTCATGGCCAGGACCACATaGAGCTGGTTGCGGCAGCGGTCAATAAACATGTTG +
Preference number: 6 (lower is better)
Translates to: NASPMGLMARTT*SWLRQRSINML
Trigger: CAACATGTTTATTGACCGCTGCCGCAACCAGCTGCATGTGGTCCTGGCCATGAGTCCCATTGGAGACGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp CAGTGCCTGGGGTGCAGACCAGGATTACAGATCACTTaGATGAGAGGGATGTACTGCTTGAACTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: QCLGCRPGLQIT*MRGMYCLNSST
Trigger: GGTGGAGGAGTTCAAGCAGTACATCCCTCTCATCCAAGTGATCTGTAATCCTGGTCTGCACCCCAGGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp CATGTAACGAGGAGTTATTGGATTTCGGCCACCACCTaGAGGGCCCATAGCGCACATGATCTGGATGTCCAC +
Preference number: 6 (lower is better)
Translates to: HVTRSYWISATT*RAHSAHDLDVH
Trigger: GTGGACATCCAGATCATGTGCGCTATGGGCCCTCCAGGTGGTGGCCGAAATCCAATAACTCCTCGTTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp CCAGTGCCTGGGGTGCAGACCAGGATTACAGATCACTaGGATGAGAGGGATGTACTGCTTGAACTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: PVPGVQTRITDH*DERDVLLELLH
Trigger: GTGGAGGAGTTCAAGCAGTACATCCCTCTCATCCAAGTGATCTGTAATCCTGGTCTGCACCCCAGGCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp AGCCGAATGCATGTGCTCCCACCCTGCTTGAAGGTCTaGTTCAACAAAAGAGGCTCTAGAATCGGGTCCAGT +
Preference number: 6 (lower is better)
Translates to: SRMHVLPPCLKV*FNKRGSRIGSS
Trigger: ACTGGACCCGATTCTAGAGCCTCTTTTGTTGAAGCAGACCTTCAAGCAGGGTGGGAGCACATGCATTCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp AGTGGCCAGTGGTGGAGAGTGTGCCCCTCCTCTCGCTaGTCTTATACAGTGGAGCAACATAACTTGGTCGTT +
Preference number: 6 (lower is better)
Translates to: SGQWWRVCPSSR*SYTVEQHNLVV
Trigger: AACGACCAAGTTATGTTGCTCCACTGTATAAGACAAGCGAGAGGAGGGGCACACTCTCCACCACTGGCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp GTCCTCTCTAACTCAACCAACCACTTCTCCACCTGGCCCCTGGCTTaGGCTGTTGAAATGGTATCTACAAGCTCCACGACTTCTCCCTCA +
Preference number: 6 (lower is better)
Translates to: VLSNSTNHFSTWPLA*AVEMVSTSSTTSPS
Trigger: TGAGGGAGAAGTCGTGGAGCTTGTAGATACCATTTCAACAGCCAAAGCCAGGGGCCAGGTGGAGAAGTGGTTGGTTGAGTTAGAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TCAAACAGCAGCTGCGTCTCCGACTGGTCCTTAGTGATGTCGGCATaGGCATTCATCCCAAAGACTTCTGGTGCTGGGATCAGTGGCAAA +
Preference number: 6 (lower is better)
Translates to: SNSSCVSDWSLVMSA*AFIPKTSGAGISGK
Trigger: TTTGCCACTGATCCCAGCACCAGAAGTCTTTGGGATGAATGCCAATGCCGACATCACTAAGGACCAGTCGGAGACGCAGCTGCTGTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp CTAACTCAACCAACCACTTCTCCACCTGGCCCCTGGCTTTGGCTGTaGAAATGGTATCTACAAGCTCCACGACTTCTCCCTCACTACTCT +
Preference number: 6 (lower is better)
Translates to: LTQPTTSPPGPWLWL*KWYLQAPRLLPHYS
Trigger: AGAGTAGTGAGGGAGAAGTCGTGGAGCTTGTAGATACCATTTCAACAGCCAAAGCCAGGGGCCAGGTGGAGAAGTGGTTGGTTGAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TGTGAATTTTCTCGCATAGTTCTGCTGCGCACCAGTCAGGAAAGCTaGTGTGAAGAAGAAGCCAGAAAGCCAGAAGACTGGAGGGGGACC +
Preference number: 6 (lower is better)
Translates to: CEFSRIVLLRTSQES*CEEEARKPEDWRGT
Trigger: GGTCCCCCTCCAGTCTTCTGGCTTTCTGGCTTCTTCTTCACACAAGCTTTCCTGACTGGTGCGCAGCAGAACTATGCGAGAAAATTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp GGGACCCAGCCATACGCCTCCTCTTCTGCATTGAACTaGTCAATCTTGTCTGCTGCTGCATCCAACTTGCTA +
Preference number: 6 (lower is better)
Translates to: GTQPYASSSALN*SILSAAASNLL
Trigger: TAGCAAGTTGGATGCAGCAGCAGACAAGATTGATCAGTTCAATGCAGAAGAGGAGGCGTATGGCTGGGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp GTAAGGCTTCGGCCAAGTCGGCATCACATTCATCTTTaGTGGCTTTGGCTGCCATGGCTTGATCGTTCGCTA +
Preference number: 6 (lower is better)
Translates to: VRLRPSRHHIHL*WLWLPWLDRSL
Trigger: TAGCGAACGATCAAGCCATGGCAGCCAAAGCCATCAAAGATGAATGTGATGCCGACTTGGCCGAAGCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp TGCGATAACCCACTTGCACAGACCCTCAGCAGCTGTTaGAGCATTCCGGATCTTCTCTGGAACAAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: CDNPLAQTLSSC*SIPDLLWNKVW
Trigger: CCAGACTTTGTTCCAGAGAAGATCCGGAATGCTTCAACAGCTGCTGAGGGTCTGTGCAAGTGGGTTATCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp AACAAGAGCAGGGAATTTCCGAAGACGAATCCGAAATaGGTCTCCAATGGGACTCATGGCCAGGACCACATG +
Preference number: 6 (lower is better)
Translates to: NKSREFPKTNPK*VSNGTHGQDHM
Trigger: CATGTGGTCCTGGCCATGAGTCCCATTGGAGACGCATTTCGGATTCGTCTTCGGAAATTCCCTGCTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp TGGCTTCAGGCTTGGGTAGGATTTGCCCATCCACATTaGTGGGATTTTGACATTCAGGATGCTGCTCACCAC +
Preference number: 6 (lower is better)
Translates to: WLQAWVGFAHPH*WDFDIQDAAHH
Trigger: GTGGTGAGCAGCATCCTGAATGTCAAAATCCCAGCAATGTGGATGGGCAAATCCTACCCAAGCCTGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp GCACAAGCGGTATGTTGCCACAATCTTTATGGACAGTaGCCTCGCAGTGACAAAGCCACAAGAGTACAGCAC +
Preference number: 6 (lower is better)
Translates to: AQAVCCHNLYGQ*PRSDKATRVQH
Trigger: GTGCTGTACTCTTGTGGCTTTGTCACTGCGAGGCCACTGTCCATAAAGATTGTGGCAACATACCGCTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000178395.2
ENSMUST00000189749.7
CDS CCA 72 bp TCCACAGCTTTGAATCGTCTGCCTTCCTCTGGCATTTaGGACATAATGTCCGGAGAGCTGAAAATGGGCTCC +
Preference number: 6 (lower is better)
Translates to: STALNRLPSSGI*DIMSGELKMGS
Trigger: GGAGCCCATTTTCAGCTCTCCGGACATTATGTCCCAAATGCCAGAGGAAGGCAGACGATTCAAAGCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp TCTCCAATGGGACTCATGGCCAGGACCACATGCAGCTaGTTGCGGCAGCGGTCAATAAACATGTTGAAAAGA +
Preference number: 6 (lower is better)
Translates to: SPMGLMARTTCS*LRQRSINMLKR
Trigger: TCTTTTCAACATGTTTATTGACCGCTGCCGCAACCAGCTGCATGTGGTCCTGGCCATGAGTCCCATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp AGCTTGTGTGAAGAAGAAGCCAGAAAGCCAGAAGACTaGAGGGGGACCAACCTCATACCATTGCTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: SLCEEEARKPED*RGTNLIPLLQE
Trigger: TTCCTGCAGCAATGGTATGAGGTTGGTCCCCCTCCAGTCTTCTGGCTTTCTGGCTTCTTCTTCACACAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp ACATGCAGCTGGTTGCGGCAGCGGTCAATAAACATGTaGAAAAGAGCTATGGGGCTCCCGTCTGTCTGTTTG +
Preference number: 6 (lower is better)
Translates to: TCSWLRQRSINM*KRAMGLPSVCL
Trigger: CAAACAGACAGACGGGAGCCCCATAGCTCTTTTCAACATGTTTATTGACCGCTGCCGCAACCAGCTGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TCAATTGTGGAATCTCCAAGCCGAATGCATGTGCTCCCACCCTGCTaGAAGGTCTGCTTCAACAAAAGAGGCTCTAGAATCGGGTCCAGT +
Preference number: 6 (lower is better)
Translates to: SIVESPSRMHVLPPC*KVCFNKRGSRIGSS
Trigger: ACTGGACCCGATTCTAGAGCCTCTTTTGTTGAAGCAGACCTTCAAGCAGGGTGGGAGCACATGCATTCGGCTTGGAGATTCCACAATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TTGACACAGCAGTGCCACACCCCGTCCAATCCAGTGTTCCTTGGGTaGGTCAGAGGGAAGAATCATGGCAATCACGAAATTTGTAGAGTG +
Preference number: 6 (lower is better)
Translates to: LTQQCHTPSNPVFLG*VRGKNHGNHEICRV
Trigger: CACTCTACAAATTTCGTGATTGCCATGATTCTTCCCTCTGACCAACCCAAGGAACACTGGATTGGACGGGGTGTGGCACTGCTGTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp AATCTCCAAGCCGAATGCATGTGCTCCCACCCTGCTTaGAGGTCTGCTTCAACAAAAGAGGCTCTAGAATCG +
Preference number: 6 (lower is better)
Translates to: NLQAECMCSHPA*RSASTKEALES
Trigger: CGATTCTAGAGCCTCTTTTGTTGAAGCAGACCTTCAAGCAGGGTGGGAGCACATGCATTCGGCTTGGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp TTGGGTAGGATTTGCCCATCCACATTGCTGGGATTTTaGCATTCAGGATGCTGCTCACCACTTCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: LGRICPSTLLGF*HSGCCSPLPPA
Trigger: AGCTGGAGGAAGTGGTGAGCAGCATCCTGAATGTCAAAATCCCAGCAATGTGGATGGGCAAATCCTACCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp ATCATTTCATCAACCTCTCTGCTGGCAACTTTTAACTaGGGATGCAGTGCCTCCAGCTCACTCTGCATGGTG +
Preference number: 6 (lower is better)
Translates to: IISSTSLLATFN*GCSASSSLCMV
Trigger: CACCATGCAGAGTGAGCTGGAGGCACTGCATCCGCAGTTAAAAGTTGCCAGCAGAGAGGTTGATGAAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp GTCATCAGCGAATTTCAGAAGAGCATTCATGGGATCTaGTCCAGGGGAGAGCACAAAGATCAACGGTGCACA +
Preference number: 6 (lower is better)
Translates to: VISEFQKSIHGI*SRGEHKDQRCT
Trigger: TGTGCACCGTTGATCTTTGTGCTCTCCCCTGGAGCAGATCCCATGAATGCTCTTCTGAAATTCGCTGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp CTTCAGGCTTGGGTAGGATTTGCCCATCCACATTGCTaGGATTTTGACATTCAGGATGCTGCTCACCACTTC +
Preference number: 6 (lower is better)
Translates to: LQAWVGFAHPHC*DFDIQDAAHHF
Trigger: GAAGTGGTGAGCAGCATCCTGAATGTCAAAATCCCAGCAATGTGGATGGGCAAATCCTACCCAAGCCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp ATCCACAGCTTTGAATCGTCTGCCTTCCTCTGGCATTaGGGACATAATGTCCGGAGAGCTGAAAATGGGCTC +
Preference number: 6 (lower is better)
Translates to: IHSFESSAFLWH*GHNVRRAENGL
Trigger: GAGCCCATTTTCAGCTCTCCGGACATTATGTCCCAAATGCCAGAGGAAGGCAGACGATTCAAAGCTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp GAATCTCCAAGCCGAATGCATGTGCTCCCACCCTGCTaGAAGGTCTGCTTCAACAAAAGAGGCTCTAGAATC +
Preference number: 6 (lower is better)
Translates to: ESPSRMHVLPPC*KVCFNKRGSRI
Trigger: GATTCTAGAGCCTCTTTTGTTGAAGCAGACCTTCAAGCAGGGTGGGAGCACATGCATTCGGCTTGGAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp GGAAGTCATTCACATAGCTGCCTAGTGGCTTCAGGCTaGGGTAGGATTTGCCCATCCACATTGCTGGGATTT +
Preference number: 6 (lower is better)
Translates to: GSHSHSCLVASG*GRICPSTLLGF
Trigger: AAATCCCAGCAATGTGGATGGGCAAATCCTACCCAAGCCTGAAGCCACTAGGCAGCTATGTGAATGACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp CCCATAGTCATAGTGATGCTGGGAGGACAGTTGCTCTaGGCACAAGCGGTATGTTGCCACAATCTTTATGGA +
Preference number: 6 (lower is better)
Translates to: PIVIVMLGGQLL*AQAVCCHNLYG
Trigger: TCCATAAAGATTGTGGCAACATACCGCTTGTGCTCAGAGCAACTGTCCTCCCAGCATCACTATGACTATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000178395.2
ENSMUST00000189749.7
CDS TCA 72 bp CTCCATGGCTTTGGCAAGACTTCTATTTCAGCACGGTaGGGTGGGAGTTCAGTTATCTTGCCATCATCGTCT +
Preference number: 6 (lower is better)
Translates to: LHGFGKTSISAR*GGSSVILPSSS
Trigger: AGACGATGATGGCAAGATAACTGAACTCCCACCTCACCGTGCTGAAATAGAAGTCTTGCCAAAGCCATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp TCCAGTACCACAAGGGCTCCCAGAGTAACACGGTTCTaGTTGGACAATTTGCCACGAACCAATGTGACAATA +
Preference number: 6 (lower is better)
Translates to: SSTTRAPRVTRF*LDNLPRTNVTI
Trigger: TATTGTCACATTGGTTCGTGGCAAATTGTCCAAGCAGAACCGTGTTACTCTGGGAGCCCTTGTGGTACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp CAAGTCGGCATCACATTCATCTTTGATGGCTTTGGCTaGCATGGCTTGATCGTTCGCTACTGTTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: QVGITFIFDGFG*HGLIVRYCFIS
Trigger: GCTGATGAAACAGTAGCGAACGATCAAGCCATGGCAGCCAAAGCCATCAAAGATGAATGTGATGCCGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp GGCAAATCTCATCCCAGGACTTTTGAGGAAGCCATGTaGAAGGGTTGGTATAAGGATTATCCAGCCCAATGC +
Preference number: 6 (lower is better)
Translates to: GKSHPRTFEEAM*KGWYKDYPAQC
Trigger: GCATTGGGCTGGATAATCCTTATACCAACCCTTGCACATGGCTTCCTCAAAAGTCCTGGGATGAGATTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp GATGTCGGCATTGGCATTCATCCCAAAGACTTCTGGTaGTGGGATCAGTGGCAAAGTCTTTGTGTAGTCGAT +
Preference number: 6 (lower is better)
Translates to: DVGIGIHPKDFW*WDQWQSLCVVD
Trigger: ATCGACTACACAAAGACTTTGCCACTGATCCCAGCACCAGAAGTCTTTGGGATGAATGCCAATGCCGACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp ATCCCTTTCAATATGCAGACAGCTTCCATGACAAGTTaGACGCCAGCAGGGGGACTCTTCATGGACTTCACA +
Preference number: 6 (lower is better)
Translates to: IPFNMQTASMTS*TPAGGLFMDFT
Trigger: TGTGAAGTCCATGAAGAGTCCCCCTGCTGGCGTCAAACTTGTCATGGAAGCTGTCTGCATATTGAAAGGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp GGACAAGGACAGTGTTCATGCTCTGAGTGTAGGTTGTaGGGTATCTCCGCATGGCAGCCTCAATATCAAAGT +
Preference number: 6 (lower is better)
Translates to: GQGQCSCSECRL*GISAWQPQYQS
Trigger: ACTTTGATATTGAGGCTGCCATGCGGAGATACCCAACAACCTACACTCAGAGCATGAACACTGTCCTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp CTTGGACAAGGACAGTGTTCATGCTCTGAGTGTAGGTaGTTGGGTATCTCCGCATGGCAGCCTCAATATCAA +
Preference number: 6 (lower is better)
Translates to: LGQGQCSCSECR*LGISAWQPQYQ
Trigger: TTGATATTGAGGCTGCCATGCGGAGATACCCAACAACCTACACTCAGAGCATGAACACTGTCCTTGTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp CATCTCGTAGATCTGAAGGATCTTCTCAGAGAAGAAGTCGGTCATTaGCAAATTCATGGTGTGGCAGTTGTCTCTGATGGCAGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: HLVDLKDLLREEVGH*QIHGVAVVSDGSQQ
Trigger: CTGCTGGCTGCCATCAGAGACAACTGCCACACCATGAATTTGCAAATGACCGACTTCTTCTCTGAGAAGATCCTTCAGATCTACGAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TCAGCTTTGATCCCTTTCAATATGCAGACAGCTTCCATGACAAGTTaGACGCCAGCAGGGGGACTCTTCATGGACTTCACAACGGTGATA +
Preference number: 6 (lower is better)
Translates to: SALIPFNMQTASMTS*TPAGGLFMDFTTVI
Trigger: TATCACCGTTGTGAAGTCCATGAAGAGTCCCCCTGCTGGCGTCAAACTTGTCATGGAAGCTGTCTGCATATTGAAAGGGATCAAAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp GTCCCATCTCTTGGACAAGGACAGTGTTCATGCTCTGAGTGTAGGTaGTTGGGTATCTCCGCATGGCAGCCTCAATATCAAAGTTGTTTG +
Preference number: 6 (lower is better)
Translates to: VPSLGQGQCSCSECR*LGISAWQPQYQSCL
Trigger: CAAACAACTTTGATATTGAGGCTGCCATGCGGAGATACCCAACAACCTACACTCAGAGCATGAACACTGTCCTTGTCCAAGAGATGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp AGAGGGATGTACTGCTTGAACTCCTCCACCATTGATTGCACTTTCTaGGTCATTGCCAGCGCATTTGGAGAATCATGGAAGACCTTCTCT +
Preference number: 6 (lower is better)
Translates to: RGMYCLNSSTIDCTF*VIASAFGESWKTFS
Trigger: AGAGAAGGTCTTCCATGATTCTCCAAATGCGCTGGCAATGACCAAGAAAGTGCAATCAATGGTGGAGGAGTTCAAGCAGTACATCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TGCCAAGTAGTCTTCAAGGGCCTGATGCCCCTTAGGTATAGCAGTTaGGACTTCTACCGTCCAAAAGGTTTGAGATACACAGAGAACAGT +
Preference number: 6 (lower is better)
Translates to: CQVVFKGLMPLRYSS*DFYRPKGLRYTENS
Trigger: ACTGTTCTCTGTGTATCTCAAACCTTTTGGACGGTAGAAGTCCAAACTGCTATACCTAAGGGGCATCAGGCCCTTGAAGACTACTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp CCATCTCTTGGACAAGGACAGTGTTCATGCTCTGAGTGTAGGTTGTaGGGTATCTCCGCATGGCAGCCTCAATATCAAAGTTGTTTGGAA +
Preference number: 6 (lower is better)
Translates to: PSLGQGQCSCSECRL*GISAWQPQYQSCLE
Trigger: TTCCAAACAACTTTGATATTGAGGCTGCCATGCGGAGATACCCAACAACCTACACTCAGAGCATGAACACTGTCCTTGTCCAAGAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp CCTCATGATGAAACCTGGATGTTCAAAAGCTCTAGTTaGTTCAGGAGGTTGGGCGATGAGGTCTGTGAAGTC +
Preference number: 6 (lower is better)
Translates to: PHDETWMFKSSS*FRRLGDEVCEV
Trigger: GACTTCACAGACCTCATCGCCCAACCTCCTGAATCAACTAGAGCTTTTGAACATCCAGGTTTCATCATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp CAAAGCATCCTGGATCTTTTTACGTTGAGGATATACTaGTGGGACCCAGCCATACGCCTCCTCTTCTGCATT +
Preference number: 6 (lower is better)
Translates to: QSILDLFTLRIY*WDPAIRLLFCI
Trigger: AATGCAGAAGAGGAGGCGTATGGCTGGGTCCCATCAGTATATCCTCAACGTAAAAAGATCCAGGATGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp CGGTCATTTGCAAATTCATGGTGTGGCAGTTGTCTCTaGTGGCAGCCAGCAGATCATTGTAATCTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: RSFANSWCGSCL*WQPADHCNLAL
Trigger: CAAAGCCAGATTACAATGATCTGCTGGCTGCCATCAGAGACAACTGCCACACCATGAATTTGCAAATGACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp CACTGGTCTTCCCTCCAAATGGCTCTCCAACAATCATaGAACCATGGCGCACAATCATCATCTCGTAGATCT +
Preference number: 6 (lower is better)
Translates to: HWSSLQMALQQS*NHGAQSSSRRS
Trigger: AGATCTACGAGATGATGATTGTGCGCCATGGTTTCATGATTGTTGGAGAGCCATTTGGAGGGAAGACCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp TCTGGCCTTTCCCGTGCCACTACGATTCCCAAAAGTTaGTCCTGCATTCCCTCAGGAGTTATCATGAAGTTT +
Preference number: 6 (lower is better)
Translates to: SGLSRATTIPKS*SCIPSGVIMKF
Trigger: AAACTTCATGATAACTCCTGAGGGAATGCAGGATCAACTTTTGGGAATCGTAGTGGCACGGGAAAGGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp ACAGCTTTCTCTAACATCTTCATAGCGATGGGCCCTTaGCCTTGGCCCAGAGATAGAGAGCTAAGTTTTGAG +
Preference number: 6 (lower is better)
Translates to: TAFSNIFIAMGP*PWPRDRELSFE
Trigger: CTCAAAACTTAGCTCTCTATCTCTGGGCCAAGGTCAAGGGCCCATCGCTATGAAGATGTTAGAGAAAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp CCACAGATCCAGCACAGCCAGCATCATAGGGTTCATTaGATTCAAGTGATCCCTAATGTAACTGCATGCAGA +
Preference number: 6 (lower is better)
Translates to: PQIQHSQHHRVH*IQVIPNVTACR
Trigger: TCTGCATGCAGTTACATTAGGGATCACTTGAATGCAATGAACCCTATGATGCTGGCTGTGCTGGATCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp TTGTCTGCTGCTGCATCCAACTTGCTATTTAGCACCTaGGCCTTTTGCAAGTACCTTTGCATATCCATCAGG +
Preference number: 6 (lower is better)
Translates to: LSAAASNLLFST*AFCKYLCISIR
Trigger: CCTGATGGATATGCAAAGGTACTTGCAAAAGGCCCAGGTGCTAAATAGCAAGTTGGATGCAGCAGCAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp TCAGAGAAGAAGTCGGTCATTTGCAAATTCATGGTGTaGCAGTTGTCTCTGATGGCAGCCAGCAGATCATTG +
Preference number: 6 (lower is better)
Translates to: SEKKSVICKFMV*QLSLMAASRSL
Trigger: CAATGATCTGCTGGCTGCCATCAGAGACAACTGCCACACCATGAATTTGCAAATGACCGACTTCTTCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp GACAAGGACAGTGTTCATGCTCTGAGTGTAGGTTGTTaGGTATCTCCGCATGGCAGCCTCAATATCAAAGTT +
Preference number: 6 (lower is better)
Translates to: DKDSVHALSVGC*VSPHGSLNIKV
Trigger: AACTTTGATATTGAGGCTGCCATGCGGAGATACCCAACAACCTACACTCAGAGCATGAACACTGTCCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp TGTGGTAAGACTGTTGTAGGCAGCTTGGCCTTTTCTTaGCTGGATAGTTTATCCATAGGCAACTGCGGTAGG +
Preference number: 6 (lower is better)
Translates to: CGKTVVGSLAFS*LDSLSIGNCGR
Trigger: CCTACCGCAGTTGCCTATGGATAAACTATCCAGCAAAGAAAAGGCCAAGCTGCCTACAACAGTCTTACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp CAGCCCTCTCCAGTAATTCCCAACATCTGTTTCTACTaGATCTGGGTTCACCTTGTGGTATGGTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: QPSPVIPNICFY*IWVHLVVWSFS
Trigger: ACTGAAGGACCATACCACAAGGTGAACCCAGATCAAGTAGAAACAGATGTTGGGAATTACTGGAGAGGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp ATCTGGCCTTTCCCGTGCCACTACGATTCCCAAAAGTaGATCCTGCATTCCCTCAGGAGTTATCATGAAGTT +
Preference number: 6 (lower is better)
Translates to: IWPFPCHYDSQK*ILHSLRSYHEV
Trigger: AACTTCATGATAACTCCTGAGGGAATGCAGGATCAACTTTTGGGAATCGTAGTGGCACGGGAAAGGCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp CTGCCTTTTGTTGTCAGCTCCTTGTACTATCAAGGCTaGCTTTTCTTCTTCAAGATCTGGCCTTTCCCGTGC +
Preference number: 6 (lower is better)
Translates to: LPFVVSSLYYQG*LFFFKIWPFPC
Trigger: GCACGGGAAAGGCCAGATCTTGAAGAAGAAAAGCAAGCCTTGATAGTACAAGGAGCTGACAACAAAAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp CGGATGATATTAGCTCGCAATCCTTTCGGTGCTTCGTaGGTCATTTTTACTCCATTCTGCAGGACCGACACA +
Preference number: 6 (lower is better)
Translates to: RMILARNPFGAS*VIFTPFCRTDT
Trigger: TGTGTCGGTCCTGCAGAATGGAGTAAAAATGACCAACGAAGCACCGAAAGGATTGCGAGCTAATATCATCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp CAAAGACTTCTGGTGCTGGGATCAGTGGCAAAGTCTTaGTGTAGTCGATGTAGCTTTTGTGATCACCAGAGG +
Preference number: 6 (lower is better)
Translates to: QRLLVLGSVAKS*CSRCSFCDHQR
Trigger: CCTCTGGTGATCACAAAAGCTACATCGACTACACAAAGACTTTGCCACTGATCCCAGCACCAGAAGTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TTTCAGCCTCTCCAGCATTCGCTCGATAGTCACAACTGCCAGGACTaGCTTATCTTGTACAACCGTTTTCATCATATCCCTCCAGGTTTT +
Preference number: 6 (lower is better)
Translates to: FQPLQHSLDSHNCQD*LILYNRFHHIPPGF
Trigger: AAAACCTGGAGGGATATGATGAAAACGGTTGTACAAGATAAGCAAGTCCTGGCAGTTGTGACTATCGAGCGAATGCTGGAGAGGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp GCTGCATCCAACTTGCTATTTAGCACCTGGGCCTTTTaGAAGTACCTTTGCATATCCATCAGGTCTCCAAAT +
Preference number: 6 (lower is better)
Translates to: AASNLLFSTWAF*KYLCISIRSPN
Trigger: ATTTGGAGACCTGATGGATATGCAAAGGTACTTGCAAAAGGCCCAGGTGCTAAATAGCAAGTTGGATGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp CCAGGATTACAGATCACTTGGATGAGAGGGATGTACTaGTTGAACTCCTCCACCATTGATTGCACTTTCTTG +
Preference number: 6 (lower is better)
Translates to: PGLQITWMRGMY*LNSSTIDCTFL
Trigger: CAAGAAAGTGCAATCAATGGTGGAGGAGTTCAAGCAGTACATCCCTCTCATCCAAGTGATCTGTAATCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp TCCAGCATTCGCTCGATAGTCACAACTGCCAGGACTTaGTTATCTTGTACAACCGTTTTCATCATATCCCTC +
Preference number: 6 (lower is better)
Translates to: SSIRSIVTTART*LSCTTVFIISL
Trigger: GAGGGATATGATGAAAACGGTTGTACAAGATAAGCAAGTCCTGGCAGTTGTGACTATCGAGCGAATGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp ATGAAAGGGCGTCCCAACTTCTTGATTATGAATTCCTaGAGCATTGGAATAACCTTGTCTGGCCTCAAGCAG +
Preference number: 6 (lower is better)
Translates to: MKGRPNFLIMNS*SIGITLSGLKQ
Trigger: CTGCTTGAGGCCAGACAAGGTTATTCCAATGCTGCAGGAATTCATAATCAAGAAGTTGGGACGCCCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp TCTCCAGTAATTCCCAACATCTGTTTCTACTTGATCTaGGTTCACCTTGTGGTATGGTCCTTCAGTCCACCA +
Preference number: 6 (lower is better)
Translates to: SPVIPNICFYLI*VHLVVWSFSPP
Trigger: TGGTGGACTGAAGGACCATACCACAAGGTGAACCCAGATCAAGTAGAAACAGATGTTGGGAATTACTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp GGTTTTATCCACAGCTTTGAATCGTCTGCCTTCCTCTaGCATTTGGGACATAATGTCCGGAGAGCTGAAAAT +
Preference number: 6 (lower is better)
Translates to: GFIHSFESSAFL*HLGHNVRRAEN
Trigger: ATTTTCAGCTCTCCGGACATTATGTCCCAAATGCCAGAGGAAGGCAGACGATTCAAAGCTGTGGATAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp GCGTCCCAACTTCTTGATTATGAATTCCTGCAGCATTaGAATAACCTTGTCTGGCCTCAAGCAGCGGATAAT +
Preference number: 6 (lower is better)
Translates to: ASQLLDYEFLQH*NNLVWPQAADN
Trigger: ATTATCCGCTGCTTGAGGCCAGACAAGGTTATTCCAATGCTGCAGGAATTCATAATCAAGAAGTTGGGACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp AGGTATAGCAGTTTGGACTTCTACCGTCCAAAAGGTTaGAGATACACAGAGAACAGTCTGTCCAGGCCAATC +
Preference number: 6 (lower is better)
Translates to: RYSSLDFYRPKG*RYTENSLSRPI
Trigger: GATTGGCCTGGACAGACTGTTCTCTGTGTATCTCAAACCTTTTGGACGGTAGAAGTCCAAACTGCTATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp TGTGGATTTTCAACTAATTCTGTGCAGAAGAATTTGTaGAGAATGCTACGCAGTGTGCGCCGGTCCCAGTCA +
Preference number: 6 (lower is better)
Translates to: CGFSTNSVQKNL*RMLRSVRRSQS
Trigger: TGACTGGGACCGGCGCACACTGCGTAGCATTCTCAACAAATTCTTCTGCACAGAATTAGTTGAAAATCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp GTTGGGTATCTCCGCATGGCAGCCTCAATATCAAAGTaGTTTGGAAGTTTACTCAGGATATCTCCAGCAACC +
Preference number: 6 (lower is better)
Translates to: VGYLRMAASISK*FGSLLRISPAT
Trigger: GGTTGCTGGAGATATCCTGAGTAAACTTCCAAACAACTTTGATATTGAGGCTGCCATGCGGAGATACCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TTGATATTTAAATGGAATGATGGAGCAGTCTGCTGCCACTGGTGCTaGACTCCTGTCAAAGTTAACTGTGGTAAGACTGTTGTAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LIFKWNDGAVCCHWC*TPVKVNCGKTVVGS
Trigger: GCTGCCTACAACAGTCTTACCACAGTTAACTTTGACAGGAGTCAAGCACCAGTGGCAGCAGACTGCTCCATCATTCCATTTAAATATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TTGACAAGGGTGCTTCTGAGATTCTCTCTCTCCTTATGTGGAGATTaGACCTTTGATCTGGAAGTTGATGGTGCAGAACGGTCATCATCA +
Preference number: 6 (lower is better)
Translates to: LTRVLLRFSLSLCGD*TFDLEVDGAERSSS
Trigger: TGATGATGACCGTTCTGCACCATCAACTTCCAGATCAAAGGTCAAATCTCCACATAAGGAGAGAGAGAATCTCAGAAGCACCCTTGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp CTGCTTGGACAATTTGCCACGAACCAATGTGACAATATCATCAATTaGTTGGTTGCATTTTGCCAAGTAGTCTTCAAGGGCCTGATGCCC +
Preference number: 6 (lower is better)
Translates to: LLGQFATNQCDNIIN*LVAFCQVVFKGLMP
Trigger: GGGCATCAGGCCCTTGAAGACTACTTGGCAAAATGCAACCAACAAATTGATGATATTGTCACATTGGTTCGTGGCAAATTGTCCAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp AGTACCACAAGGGCTCCCAGAGTAACACGGTTCTGCTTGGACAATTaGCCACGAACCAATGTGACAATATCATCAATTTGTTGGTTGCAT +
Preference number: 6 (lower is better)
Translates to: STTRAPRVTRFCLDN*PRTNVTISSICWLH
Trigger: ATGCAACCAACAAATTGATGATATTGTCACATTGGTTCGTGGCAAATTGTCCAAGCAGAACCGTGTTACTCTGGGAGCCCTTGTGGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp ATGGCAAATCGGAACAAGACGAGGTTCATGGGCTTTTTGCTCATGTaGTTATATTCATCCAGATGGCCTTCGACAATCATCCTGAGAGCA +
Preference number: 6 (lower is better)
Translates to: MANRNKTRFMGFLLM*LYSSRWPSTIILRA
Trigger: TGCTCTCAGGATGATTGTCGAAGGCCATCTGGATGAATATAACAACATGAGCAAAAAGCCCATGAACCTCGTCTTGTTCCGATTTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp AGGTATGATCGGATGATATTAGCTCGCAATCCTTTCGGTGCTTCGTaGGTCATTTTTACTCCATTCTGCAGGACCGACACAGGGAAATTT +
Preference number: 6 (lower is better)
Translates to: RYDRMILARNPFGAS*VIFTPFCRTDTGKF
Trigger: AAATTTCCCTGTGTCGGTCCTGCAGAATGGAGTAAAAATGACCAACGAAGCACCGAAAGGATTGCGAGCTAATATCATCCGATCATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp AATGTGGTCATCCAGCAACATCTGAATGTCATCGACTaGGGACAAAATGTATGTCCCACTTTCTCTGTAGGG +
Preference number: 6 (lower is better)
Translates to: NVVIQQHLNVID*GQNVCPTFSVG
Trigger: CCCTACAGAGAAAGTGGGACATACATTTTGTCCTCAGTCGATGACATTCAGATGTTGCTGGATGACCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp TCACATTCATCTTTGATGGCTTTGGCTGCCATGGCTTaGTCGTTCGCTACTGTTTCATCAGCTTTCACAATC +
Preference number: 6 (lower is better)
Translates to: SHSSLMALAAMA*SFATVSSAFTI
Trigger: GATTGTGAAAGCTGATGAAACAGTAGCGAACGATCAAGCCATGGCAGCCAAAGCCATCAAAGATGAATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp TTGTCTGGCCTCAAGCAGCGGATAATAAGCATCCTCTaGAAGTCGTTTGCTTTATTTTCCCAATCTTCGGGA +
Preference number: 6 (lower is better)
Translates to: LSGLKQRIISIL*KSFALFSQSSG
Trigger: TCCCGAAGATTGGGAAAATAAAGCAAACGACTTTCAGAGGATGCTTATTATCCGCTGCTTGAGGCCAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp GCTCTCTTCACCAACGATTTGATCAGTTCCTCACAGTaGATTTCAAACATTCCCAAACGAACAGCCTTTCGA +
Preference number: 6 (lower is better)
Translates to: ALFTNDLISSSQ*ISNIPKRTAFR
Trigger: TCGAAAGGCTGTTCGTTTGGGAATGTTTGAAATGCACTGTGAGGAACTGATCAAATCGTTGGTGAAGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp TGGCAAATCGGAACAAGACGAGGTTCATGGGCTTTTTaGTCATGTTGTTATATTCATCCAGATGGCCTTCGA +
Preference number: 6 (lower is better)
Translates to: WQIGTRRGSWAF*SCCYIHPDGLR
Trigger: TCGAAGGCCATCTGGATGAATATAACAACATGAGCAAAAAGCCCATGAACCTCGTCTTGTTCCGATTTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp AGTTCCTCATACTGGTCCAGGAACATGTGGAGTTGCTaGACACTGATTCTTAGATCTGTCTCATTGAATTCG +
Preference number: 6 (lower is better)
Translates to: SSSYWSRNMWSC*TLILRSVSLNS
Trigger: CGAATTCAATGAGACAGATCTAAGAATCAGTGTGCAGCAACTCCACATGTTCCTGGACCAGTATGAGGAACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp CAACATAACTTGGTCGTTTGGATATGTCTGACTTTTTaGATGGCTTTAGCCACATCACGGGGACTGTGTCAT +
Preference number: 6 (lower is better)
Translates to: QHNLVVWICLTF*MALATSRGLCH
Trigger: ATGACACAGTCCCCGTGATGTGGCTAAAGCCATGCAAAAAGTCAGACATATCCAAACGACCAAGTTATGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp TTGTACTATCAAGGCTTGCTTTTCTTCTTCAAGATCTaGCCTTTCCCGTGCCACTACGATTCCCAAAAGTTG +
Preference number: 6 (lower is better)
Translates to: LYYQGLLFFFKI*PFPCHYDSQKL
Trigger: CAACTTTTGGGAATCGTAGTGGCACGGGAAAGGCCAGATCTTGAAGAAGAAAAGCAAGCCTTGATAGTACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp TCATGCTCTGAGTGTAGGTTGTTGGGTATCTCCGCATaGCAGCCTCAATATCAAAGTTGTTTGGAAGTTTAC +
Preference number: 6 (lower is better)
Translates to: SCSECRLLGISA*QPQYQSCLEVY
Trigger: GTAAACTTCCAAACAACTTTGATATTGAGGCTGCCATGCGGAGATACCCAACAACCTACACTCAGAGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp TCGCTCGATAGTCACAACTGCCAGGACTTGCTTATCTaGTACAACCGTTTTCATCATATCCCTCCAGGTTTT +
Preference number: 6 (lower is better)
Translates to: SLDSHNCQDLLI*YNRFHHIPPGF
Trigger: AAAACCTGGAGGGATATGATGAAAACGGTTGTACAAGATAAGCAAGTCCTGGCAGTTGTGACTATCGAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp AGGGCTCCCAGAGTAACACGGTTCTGCTTGGACAATTaGCCACGAACCAATGTGACAATATCATCAATTTGT +
Preference number: 6 (lower is better)
Translates to: RAPRVTRFCLDN*PRTNVTISSIC
Trigger: ACAAATTGATGATATTGTCACATTGGTTCGTGGCAAATTGTCCAAGCAGAACCGTGTTACTCTGGGAGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp CGGAACAAGACGAGGTTCATGGGCTTTTTGCTCATGTaGTTATATTCATCCAGATGGCCTTCGACAATCATC +
Preference number: 6 (lower is better)
Translates to: RNKTRFMGFLLM*LYSSRWPSTII
Trigger: GATGATTGTCGAAGGCCATCTGGATGAATATAACAACATGAGCAAAAAGCCCATGAACCTCGTCTTGTTCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp ATGGCAAATCGGAACAAGACGAGGTTCATGGGCTTTTaGCTCATGTTGTTATATTCATCCAGATGGCCTTCG +
Preference number: 6 (lower is better)
Translates to: MANRNKTRFMGF*LMLLYSSRWPS
Trigger: CGAAGGCCATCTGGATGAATATAACAACATGAGCAAAAAGCCCATGAACCTCGTCTTGTTCCGATTTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp GGTAACTCGTCAGCCAGATTCGGAAATCAGGGTGTGTaGATTCTGGGTTTAACTCCTCACAAACTTTCTCAA +
Preference number: 6 (lower is better)
Translates to: GNSSARFGNQGV*ILGLTPHKLSQ
Trigger: TTGAGAAAGTTTGTGAGGAGTTAAACCCAGAATCAACACACCCTGATTTCCGAATCTGGCTGACGAGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp TATTGTGGATTTTCAACTAATTCTGTGCAGAAGAATTaGTTGAGAATGCTACGCAGTGTGCGCCGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: YCGFSTNSVQKN*LRMLRSVRRSQ
Trigger: CTGGGACCGGCGCACACTGCGTAGCATTCTCAACAAATTCTTCTGCACAGAATTAGTTGAAAATCCACAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp GGTATCTCCGCATGGCAGCCTCAATATCAAAGTTGTTaGGAAGTTTACTCAGGATATCTCCAGCAACCTCAT +
Preference number: 6 (lower is better)
Translates to: GISAWQPQYQSC*EVYSGYLQQPH
Trigger: ATGAGGTTGCTGGAGATATCCTGAGTAAACTTCCAAACAACTTTGATATTGAGGCTGCCATGCGGAGATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp CTTGGACAATTTGCCACGAACCAATGTGACAATATCATCAATTTGTaGGTTGCATTTTGCCAAGTAGTCTTCAAGGGCCTGATGCCCCTT +
Preference number: 6 (lower is better)
Translates to: LGQFATNQCDNIINL*VAFCQVVFKGLMPL
Trigger: AAGGGGCATCAGGCCCTTGAAGACTACTTGGCAAAATGCAACCAACAAATTGATGATATTGTCACATTGGTTCGTGGCAAATTGTCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp CAGAAATCCTCAATTTTCTTCCCTGAACCTGTTGGGTCAGGGATTTaGTCAGCTTTGATCCCTTTCAATATGCAGACAGCTTCCATGACA +
Preference number: 6 (lower is better)
Translates to: QKSSIFFPEPVGSGI*SALIPFNMQTASMT
Trigger: TGTCATGGAAGCTGTCTGCATATTGAAAGGGATCAAAGCTGACAAAATCCCTGACCCAACAGGTTCAGGGAAGAAAATTGAGGATTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp AATTTGTATTGTGGATTTTCAACTAATTCTGTGCAGAAGAATTTGTaGAGAATGCTACGCAGTGTGCGCCGGTCCCAGTCATCAGTCACC +
Preference number: 6 (lower is better)
Translates to: NLYCGFSTNSVQKNL*RMLRSVRRSQSSVT
Trigger: GGTGACTGATGACTGGGACCGGCGCACACTGCGTAGCATTCTCAACAAATTCTTCTGCACAGAATTAGTTGAAAATCCACAATACAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp TCAAACTCATCACATAGCATTGTGCTTTCTTTCTGGTaGTTGCGGAACATCTTGGCTATCAGTTTCCCACAG +
Preference number: 6 (lower is better)
Translates to: SNSSHSIVLSFW*LRNILAISFPQ
Trigger: CTGTGGGAAACTGATAGCCAAGATGTTCCGCAATCACCAGAAAGAAAGCACAATGCTATGTGATGAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp ATCACAGAGCAATCTTTGAGGTCGTACCAATTCCAATaGTCTAGCCACTGTCTAAGTAATTCAATGGGAGGC +
Preference number: 6 (lower is better)
Translates to: ITEQSLRSYQFQ*SSHCLSNSMGG
Trigger: GCCTCCCATTGAATTACTTAGACAGTGGCTAGATCATTGGAATTGGTACGACCTCAAAGATTGCTCTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp TCTATGTCAACTAGACGTAATTTCTTAAAAGTGCTATaGCACAGATCCAGCACAGCCAGCATCATAGGGTTC +
Preference number: 6 (lower is better)
Translates to: SMSTRRNFLKVL*HRSSTASIIGF
Trigger: GAACCCTATGATGCTGGCTGTGCTGGATCTGTGGCATAGCACTTTTAAGAAATTACGTCTAGTTGACATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp GAACATCTTGGCTATCAGTTTCCCACAGATGATATCTaGTCTCTTCACCAACGATTTGATCAGTTCCTCACA +
Preference number: 6 (lower is better)
Translates to: EHLGYQFPTDDI*SLHQRFDQFLT
Trigger: TGTGAGGAACTGATCAAATCGTTGGTGAAGAGAGCAGATATCATCTGTGGGAAACTGATAGCCAAGATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp ATATTTAAATGGAATGATGGAGCAGTCTGCTGCCACTaGTGCTTGACTCCTGTCAAAGTTAACTGTGGTAAG +
Preference number: 6 (lower is better)
Translates to: IFKWNDGAVCCH*CLTPVKVNCGK
Trigger: CTTACCACAGTTAACTTTGACAGGAGTCAAGCACCAGTGGCAGCAGACTGCTCCATCATTCCATTTAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp GTCAAAGTTAACTGTGGTAAGACTGTTGTAGGCAGCTaGGCCTTTTCTTTGCTGGATAGTTTATCCATAGGC +
Preference number: 6 (lower is better)
Translates to: VKVNCGKTVVGS*AFSLLDSLSIG
Trigger: GCCTATGGATAAACTATCCAGCAAAGAAAAGGCCAAGCTGCCTACAACAGTCTTACCACAGTTAACTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp TCGGACTCTAAACCACCATCTTGTTGCATAATGACTTaGACAAGGGTGCTTCTGAGATTCTCTCTCTCCTTA +
Preference number: 6 (lower is better)
Translates to: SDSKPPSCCIMT*TRVLLRFSLSL
Trigger: TAAGGAGAGAGAGAATCTCAGAAGCACCCTTGTCAAAGTCATTATGCAACAAGATGGTGGTTTAGAGTCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp TTCCCACAGATGATATCTGCTCTCTTCACCAACGATTaGATCAGTTCCTCACAGTGCATTTCAAACATTCCC +
Preference number: 6 (lower is better)
Translates to: FPQMISALFTND*ISSSQCISNIP
Trigger: GGGAATGTTTGAAATGCACTGTGAGGAACTGATCAAATCGTTGGTGAAGAGAGCAGATATCATCTGTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp ATCACATTCATCTTTGATGGCTTTGGCTGCCATGGCTaGATCGTTCGCTACTGTTTCATCAGCTTTCACAAT +
Preference number: 6 (lower is better)
Translates to: ITFIFDGFGCHG*IVRYCFISFHN
Trigger: ATTGTGAAAGCTGATGAAACAGTAGCGAACGATCAAGCCATGGCAGCCAAAGCCATCAAAGATGAATGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TCAATGACATCGGACTCTAAACCACCATCTTGTTGCATAATGACTTaGACAAGGGTGCTTCTGAGATTCTCTCTCTCCTTATGTGGAGAT +
Preference number: 6 (lower is better)
Translates to: SMTSDSKPPSCCIMT*TRVLLRFSLSLCGD
Trigger: ATCTCCACATAAGGAGAGAGAGAATCTCAGAAGCACCCTTGTCAAAGTCATTATGCAACAAGATGGTGGTTTAGAGTCCGATGTCATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp GCTATCAGTTTCCCACAGATGATATCTGCTCTCTTCACCAACGATTaGATCAGTTCCTCACAGTGCATTTCAAACATTCCCAAACGAACA +
Preference number: 6 (lower is better)
Translates to: AISFPQMISALFTND*ISSSQCISNIPKRT
Trigger: TGTTCGTTTGGGAATGTTTGAAATGCACTGTGAGGAACTGATCAAATCGTTGGTGAAGAGAGCAGATATCATCTGTGGGAAACTGATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp ATGTGTTCTATGGCAAATCGGAACAAGACGAGGTTCATGGGCTTTTaGCTCATGTTGTTATATTCATCCAGATGGCCTTCGACAATCATC +
Preference number: 6 (lower is better)
Translates to: MCSMANRNKTRFMGF*LMLLYSSRWPSTII
Trigger: GATGATTGTCGAAGGCCATCTGGATGAATATAACAACATGAGCAAAAAGCCCATGAACCTCGTCTTGTTCCGATTTGCCATAGAACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TCAAATTTGTATTGTGGATTTTCAACTAATTCTGTGCAGAAGAATTaGTTGAGAATGCTACGCAGTGTGCGCCGGTCCCAGTCATCAGTC +
Preference number: 6 (lower is better)
Translates to: SNLYCGFSTNSVQKN*LRMLRSVRRSQSSV
Trigger: GACTGATGACTGGGACCGGCGCACACTGCGTAGCATTCTCAACAAATTCTTCTGCACAGAATTAGTTGAAAATCCACAATACAAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp AGGTTGTTGGGTATCTCCGCATGGCAGCCTCAATATCAAAGTTGTTaGGAAGTTTACTCAGGATATCTCCAGCAACCTCATTTACTACTT +
Preference number: 6 (lower is better)
Translates to: RLLGISAWQPQYQSC*EVYSGYLQQPHLLL
Trigger: AAGTAGTAAATGAGGTTGCTGGAGATATCCTGAGTAAACTTCCAAACAACTTTGATATTGAGGCTGCCATGCGGAGATACCCAACAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp CACGGTTCTGCTTGGACAATTTGCCACGAACCAATGTaGCAATATCATCAATTTGTTGGTTGCATTTTGCCA +
Preference number: 6 (lower is better)
Translates to: HGSAWTICHEPM*QYHQFVGCILP
Trigger: TGGCAAAATGCAACCAACAAATTGATGATATTGTCACATTGGTTCGTGGCAAATTGTCCAAGCAGAACCGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp CTTCATAGTCAAACGCAAGAAGATCAATTGGAATTGTaGATTTTCTCGCATAGTTCTGCTGCGCACCAGTCA +
Preference number: 6 (lower is better)
Translates to: LHSQTQEDQLEL*IFSHSSAAHQS
Trigger: TGACTGGTGCGCAGCAGAACTATGCGAGAAAATTCACAATTCCAATTGATCTTCTTGCGTTTGACTATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp TGTTTGATATTTAAATGGAATGATGGAGCAGTCTGCTaGCACTGGTGCTTGACTCCTGTCAAAGTTAACTGT +
Preference number: 6 (lower is better)
Translates to: CLIFKWNDGAVC*HWCLTPVKVNC
Trigger: ACAGTTAACTTTGACAGGAGTCAAGCACCAGTGGCAGCAGACTGCTCCATCATTCCATTTAAATATCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp TCATCAATGACATCGGACTCTAAACCACCATCTTGTTaGATAATGACTTTGACAAGGGTGCTTCTGAGATTC +
Preference number: 6 (lower is better)
Translates to: SSMTSDSKPPSC*IMTLTRVLLRF
Trigger: GAATCTCAGAAGCACCCTTGTCAAAGTCATTATGCAACAAGATGGTGGTTTAGAGTCCGATGTCATTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp AAGTTTGTATCTGAAGTAGGAGAGAGCTCCTTTGTATaGCTTCTGATGAATTCAACAGAGAGAGGGACCATT +
Preference number: 6 (lower is better)
Translates to: KFVSEVGESSFV*LLMNSTERGTI
Trigger: AATGGTCCCTCTCTCTGTTGAATTCATCAGAAGGCATACAAAGGAGCTCTCTCCTACTTCAGATACAAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp CTTTTTGCTGCACAAGTCAACCTGGTTTTCCAAGTCTaGTTTCTTCTGCTTATTCAACTCAAGTGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: LFAAQVNLVFQV*FLLLIQLKCVL
Trigger: CAAGACACACTTGAGTTGAATAAGCAGAAGAAAGCAGACTTGGAAAACCAGGTTGACTTGTGCAGCAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp CAAGCAGCGGATAATAAGCATCCTCTGAAAGTCGTTTaGTTTATTTTCCCAATCTTCGGGAAACATCTCATG +
Preference number: 6 (lower is better)
Translates to: QAADNKHPLKVV*FIFPIFGKHLM
Trigger: CATGAGATGTTTCCCGAAGATTGGGAAAATAAAGCAAACGACTTTCAGAGGATGCTTATTATCCGCTGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CCA 72 bp ATGGGCTTTTTGCTCATGTTGTTATATTCATCCAGATaGCCTTCGACAATCATCCTGAGAGCATCCACATTT +
Preference number: 6 (lower is better)
Translates to: MGFLLMLLYSSR*PSTIILRASTF
Trigger: AAATGTGGATGCTCTCAGGATGATTGTCGAAGGCCATCTGGATGAATATAACAACATGAGCAAAAAGCCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp TTATCCAGCCCAATGCCACCAGTGAGTAGAAATCTCCACTCTGTTTaGTTAATCAAGTTGTCATGTATCAGCAGATTCACAGTGAGACAA +
Preference number: 6 (lower is better)
Translates to: LSSPMPPVSRNLHSV*LIKLSCISRFTVRQ
Trigger: TTGTCTCACTGTGAATCTGCTGATACATGACAACTTGATTAACAAAACAGAGTGGAGATTTCTACTCACTGGTGGCATTGGGCTGGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp ACAAAATGTATGTCCCACTTTCTCTGTAGGGATGAATaGCAAACTCCATGGAGTTCCATTCAGTCATCATCT +
Preference number: 6 (lower is better)
Translates to: TKCMSHFLCRDE*QTPWSSIQSSS
Trigger: AGATGATGACTGAATGGAACTCCATGGAGTTTGTCATTCATCCCTACAGAGAAAGTGGGACATACATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp TGTTATATTCATCCAGATGGCCTTCGACAATCATCCTaGGAGCATCCACATTTTCAACTTCTCTATAGCCAA +
Preference number: 6 (lower is better)
Translates to: CYIHPDGLRQSS*EHPHFQLLYSQ
Trigger: TTGGCTATAGAGAAGTTGAAAATGTGGATGCTCTCAGGATGATTGTCGAAGGCCATCTGGATGAATATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp CAATTTGCCACGAACCAATGTGACAATATCATCAATTaGTTGGTTGCATTTTGCCAAGTAGTCTTCAAGGGC +
Preference number: 6 (lower is better)
Translates to: QFATNQCDNIIN*LVAFCQVVFKG
Trigger: GCCCTTGAAGACTACTTGGCAAAATGCAACCAACAAATTGATGATATTGTCACATTGGTTCGTGGCAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp ACTGTGTCCAGAGTTGGCACAATGATCTCATTAAACTGTACATCTTaGGGAATTGGAGGAGTATCTGCCAATTTCTTTATCCATTTATCC +
Preference number: 6 (lower is better)
Translates to: TVSRVGTMISLNCTS*GIGGVSANFFIHLS
Trigger: GGATAAATGGATAAAGAAATTGGCAGATACTCCTCCAATTCCCAAAGATGTACAGTTTAATGAGATCATTGTGCCAACTCTGGACACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp CTTAGATGCCAGGCCAGGATTCTGGAGAAGATTGTGAACATGGACTaGTCACTAAATTCATTGATGGTTACAATATTGAAATGTCTCATG +
Preference number: 6 (lower is better)
Translates to: LRCQARILEKIVNMD*SLNSLMVTILKCLM
Trigger: CATGAGACATTTCAATATTGTAACCATCAATGAATTTAGTGACAAGTCCATGTTCACAATCTTCTCCAGAATCCTGGCCTGGCATCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp AGTCTGTCCAGGCCAATCTCTTACCCAACTAATTCGTaGATATTTTGTATAGGCAGCAATTGCATCTCTAAT +
Preference number: 6 (lower is better)
Translates to: SLSRPISYPTNS*IFCIGSNCISN
Trigger: ATTAGAGATGCAATTGCTGCCTATACAAAATATTCACGAATTAGTTGGGTAAGAGATTGGCCTGGACAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp AATGATATTCTGAGTTTGGGCTGCTGTAGTTTGGGCTaGGAAGTTAACTATAAGAGGTTTGTAGATGTCCTT +
Preference number: 6 (lower is better)
Translates to: NDILSLGCCSLG*EVNYKRFVDVL
Trigger: AAGGACATCTACAAACCTCTTATAGTTAACTTCTCAGCCCAAACTACAGCAGCCCAAACTCAGAATATCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS GCA 72 bp GACAAGACCATGATGCTATTAGTCATAACTTTTAGATaGTGTGGAACCAATTGTAATACATGCTCCAGCCAA +
Preference number: 6 (lower is better)
Translates to: DKTMMLLVITFR*CGTNCNTCSSQ
Trigger: TTGGCTGGAGCATGTATTACAATTGGTTCCACAGCATCTAAAAGTTATGACTAATAGCATCATGGTCTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 90 bp CATTCAGTCATCATCTTATCCATGGCCTTTTCAAGAGAATATTCTTaGCTAGCTGCTTCACTAATGCCTTCAAATCTGTCTAAAAATGGC +
Preference number: 6 (lower is better)
Translates to: HSVIILSMAFSREYS*LAASLMPSNLSKNG
Trigger: GCCATTTTTAGACAGATTTGAAGGCATTAGTGAAGCAGCTAGCAAAGAATATTCTCTTGAAAAGGCCATGGATAAGATGATGACTGAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS TCA 72 bp AAGCATGAAAGAAACAGAGGCCATAAAGCAATTTCTTaGATTCCTCAGGCTTTTTGCAGCTGTCAAAGAATT +
Preference number: 6 (lower is better)
Translates to: KHERNRGHKAIS*IPQAFCSCQRI
Trigger: AATTCTTTGACAGCTGCAAAAAGCCTGAGGAATTCAAGAAATTGCTTTATGGCCTCTGTTTCTTTCATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp AGAGTTGGCACAATGATCTCATTAAACTGTACATCTTaGGGAATTGGAGGAGTATCTGCCAATTTCTTTATC +
Preference number: 6 (lower is better)
Translates to: RVGTMISLNCTS*GIGGVSANFFI
Trigger: GATAAAGAAATTGGCAGATACTCCTCCAATTCCCAAAGATGTACAGTTTAATGAGATCATTGTGCCAACTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp CAGGCCAGGATTCTGGAGAAGATTGTGAACATGGACTaGTCACTAAATTCATTGATGGTTACAATATTGAAA +
Preference number: 6 (lower is better)
Translates to: QARILEKIVNMD*SLNSLMVTILK
Trigger: TTTCAATATTGTAACCATCAATGAATTTAGTGACAAGTCCATGTTCACAATCTTCTCCAGAATCCTGGCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7
CDS CAA 72 bp GTGAGTAGAAATCTCCACTCTGTTTTGTTAATCAAGTaGTCATGTATCAGCAGATTCACAGTGAGACAAAAG +
Preference number: 6 (lower is better)
Translates to: VSRNLHSVLLIK*SCISRFTVRQK
Trigger: CTTTTGTCTCACTGTGAATCTGCTGATACATGACAACTTGATTAACAAAACAGAGTGGAGATTTCTACTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000189749.7