RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022262

Ensembl transcript IDs: ENSMUST00000067048.8

Found 762 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAGGAAGTGTATGGGATaGTGTCATCTCATTCATTGC +
Preference number: 2 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFRKCMG*CHLIHC
Trigger: GCAATGAATGAGATGACATCATCCCATACACTTCCT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
3UTR-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTGTCATCTCATTCATTaGACACAACACAGTCTGACT +
Preference number: 2 (lower is better)
Translates to: TETTFTQASHVTLENLAACHLIH*TQHSLT
Trigger: AGTCAGACTGTGTTGTGTGCAATGAATGAGATGACA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
3UTR-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAGTCTGACTTATATATaGCCAGCACTGACAGAGAAA +
Preference number: 2 (lower is better)
Translates to: KVTETTFTQASHVTLENLSLTYI*PALTEK
Trigger: TTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
3UTR-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTATCCTTCTGGCTACTaGATTTTAAATTGCTGTCTT +
Preference number: 2 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFYPSGY*ILNCCL
Trigger: AAGACAGCAATTTAAAATGCAGTAGCCAGAAGGATA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
3UTR TCA 72 bp CCTTTGGAATCCCTCACACACCTTGTAGGGCAGTTTTaGTCATCCCTATCCTTCTGGCTACTGCATTTTAAA +
Preference number: 3 (lower is better)
Translates to: PLESLTHLVGQF*SSLSFWLLHFK
Trigger: TTTAAAATGCAGTAGCCAGAAGGATAGGGATGATCAAAACTGCCCTACAAGGTGTGTGAGGGATTCCAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGTGGCAGGTGCAGTGTaGGCCCTTCTCGAGAGCGCA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPVAGAV*ALLESA
Trigger: TGCGCTCTCGAGAAGGGCCCACACTGCACCTGCCAC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCAACAGCTTCCTCGCATaGACCTCCTGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPNSFLA*TSWPWP
Trigger: GGGCCAGGGCCAGGAGGTCCATGCGAGGAAGCTGTT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCAGGATTCACCCCTCCTaGGGAACCACAGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPRIHPS*GTTVPC
Trigger: GCAGGGCACTGTGGTTCCTCAGGAGGGGTGAATCCT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGTCAGCTGTGGCAGGTaGAGTGTGGGCCCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPVSCGR*SVGPSR
Trigger: TCGAGAAGGGCCCACACTGCACCTGCCACAGCTGAC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCTGCCGCTGGCTTCCTaGGGCTTCAATCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPLPLAS*GFNPLA
Trigger: GGCAAGTGGATTGAAGCCCCAGGAAGCCAGCGGCAG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGATTTGGGCGTCACGTaGGTAGAGCGCCGGAACCTC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPDLGVT*VERRNL
Trigger: GAGGTTCCGGCGCTCTACCCACGTGACGCCCAAATC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGGGCCTGAGCTGTCTTaGGGTCCACAGCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPGPELS*GPQQQC
Trigger: ACATTGCTGCTGTGGACCTCAAGACAGCTCAGGCCC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGGAACCACAGTGCCCTaGTTCTGCTCCCTCCACATC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPGTTVP*FCSLHI
Trigger: GATGTGGAGGGAGCAGAAGCAGGGCACTGTGGTTCC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGAGGCTGGCTCCAGATaGTGGCAGTCCCATTGTTGG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPEAGSR*WQSHCW
Trigger: CCAACAATGGGACTGCCACCATCTGGAGCCAGCCTC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTGGGAATGGCCAGAGTaGCACTTGCCCGGAAAATGG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPWEWPE*HLPGKW
Trigger: CCATTTTCCGGGCAAGTGTCACTCTGGCCATTCCCA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGCAGGTGGTCTTCCCTaGCCCACTAGGCCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAAGGLP*PTRPQG
Trigger: ACCCTGGGGCCTAGTGGGTCAGGGAAGACCACCTGC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGCTGTGGTATGTCATTaGGTCCACCCCCAGGATGGA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPAVVCH*VHPQDG
Trigger: TCCATCCTGGGGGTGGACGCAATGACATACCACAGC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCATCGGCCCATGTCCTTaGTGGTCTCTGTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPIGPCP*WSLSCL
Trigger: CAGGCAAGACAGAGACCACCAAGGACATGGGCCGAT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGGCCGCAGCAAGCAATaGCAGCGCAGCCTTCACGTC +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAGRSKQ*QRSLHV
Trigger: GACGTGAAGGCTGCGCTGGCATTGCTTGCTGCGGCC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCCAGACGGGCCCTCTTaGCTTCCTTCTCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPPDGPS*LPSLLS
Trigger: TGAAAGAAGAGAAGGAAGCCAAGAGGGCCCGTCTGG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTCCTCCAGGATGGCGTaGATGCGGAACTCAATCAAG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSSRMA*MRNSIK
Trigger: CTTGATTGAGTTCCGCATCCACGCCATCCTGGAGGA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTCTGCAGGTCCTGCATaGCCAGGATGTGACGATTCT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSAGPA*PGCDDS
Trigger: AGAATCGTCACATCCTGGCCATGCAGGACCTGCAGA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTGGAAACCGGGTTCTTaGATATTTGCAGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPWKPGS*IFAAAW
Trigger: CCAGGCAGCTGCAAATATTCAAGAACCCGGTTTCCA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTGCATGGCCAGGATGTaGCGATTCTCTTGCACTATC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPCMARM*RFSCTI
Trigger: GATAGTGCAAGAGAATCGTCACATCCTGGCCATGCA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGCCAAGGCCTCAGAATaGCCTTCTCTTCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPAKASE*PSLLPE
Trigger: TTCAGGAAGAAGAGAAGGGCATTCTGAGGCCTTGGC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGGCACAGTAGTAGCCTaGCCCAATCACACCAAAGAT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPGTVVA*PNHTKD
Trigger: ATCTTTGGTGTGATTGGGGCAGGCTACTACTGTGCC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATCAGGTGAGGGGGTCTaGCCAGGGTGCGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGSGEGV*PGCALW
Trigger: CCACAGTGCGCACCCTGGGCAGACCCCCTCACCTGA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCAAGGTCTGCTTCTCTaGCATGGCCTGTTCATACTC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPQGLLL*HGLFIL
Trigger: GAGTATGAACAGGCCATGGCAGAGAAGCAGACCTTG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTCAATAGGTCCCACTTaGAAGTCGGTGGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSIGPT*KSVEIC
Trigger: GCAGATCTCCACCGACTTCCAAGTGGGACCTATTGA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAGCGTCCGTCAGCTGTaGCAGGTGCAGTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKISVRQL*QVQCGP
Trigger: GGGCCCACACTGCACCTGCCACAGCTGACGGACGCT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTACTCTCCCCAGTAGCTaGTCCTCCAGGCCCTTCACG +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAATLPSS*SSRPFT
Trigger: CGTGAAGGGCCTGGAGGACCAGCTACTGGGGAGAGT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCATCCTCCATTTGCCATaGTCTGGTGCAACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPILHLP*SGATAS
Trigger: GGAAGCTGTTGCACCAGACCATGGCAAATGGAGGAT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAACCCCAGCCATGGCTTaGGGCCCTGAGAGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKITPAMA*GPESWD
Trigger: ATCCCAGCTCTCAGGGCCTCAAGCCATGGCTGGGGT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGCAGCTCCAGGTCCTTaGTCTTTGCAAAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPAAPGP*SLQRHF
Trigger: AAAATGCCTTTGCAAAGATCAAGGACCTGGAGCTGC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCCTCCATGCTGGCGATaGCTTCGGAGGTACTGTCTC +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAPPCWR*LRRYCL
Trigger: GAGACAGTACCTCCGAAGTCATCGCCAGCATGGAGG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGCTCATTGGCAAACTTaGTGGACATCTGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPAHWQT*WTSEGE
Trigger: CTCTCCTTCAGATGTCCATCAAGTTTGCCAATGAGC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGGTGTGGGAGTCCGATaGCTGGCCCAGAATCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFGVGVR*LAQNLQ
Trigger: CTGGAGATTCTGGGCCAGGCATCGGACTCCCACACC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCACCTGTAGCTTCTGGTaGATCCCTCAAGAAATCCAC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPTCSFW*IPQEIH
Trigger: GTGGATTTCTTGAGGGATGCACCAGAAGCTACAGGT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCAGCTTTGACCTTCTCTaGAGCCTGTGCCTTCATTGT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSFDLL*SLCLHC
Trigger: ACAATGAAGGCACAGGCTGCAGAGAAGGTCAAAGCT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGTCGACAATGGCCTGTaGTTTGTCCTTTACCTTCTG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPVDNGL*FVLYLL
Trigger: CAGAAGGTAAAGGACAAAGCACAGGCCATTGTCGAC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGGGGTCTGCCCAGGGTaGGCACTGTGGCAATGTCAG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIGVCPG*ALWQCQ
Trigger: CTGACATTGCCACAGTGCGCACCCTGGGCAGACCCC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGTGTCTTTGGGGAACTaGTGTAGGTTCTGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPVSLGN*CRFWRK
Trigger: CTTTCTCCAGAACCTACAGCAGTTCCCCAAAGACAC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTCAGCCTGGGCTTTCTaGAGGTCCTGCATGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSAWAF*RSCMAR
Trigger: CCTGGCCATGCAGGACCTGCAGAAAGCCCAGGCTGA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACCAGAGGACCGAACTTaGGCCGCTCCTGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIPEDRT*AAPGQW
Trigger: CCACTGTCCAGGAGCGGCGCAAGTTCGGTCCTCTGG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCATGTACTCCAGCAATaGACAGCACTCACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPHVLQQ*TALTEV
Trigger: GACTTCAGTGAGTGCTGTCCATTGCTGGAGTACATG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTGGGAGTCCGATGCCTaGCCCAGAATCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAWESDA*PRISSR
Trigger: TCTGCTGGAGATTCTGGGCCAGGCATCGGACTCCCA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTGCAGTTTGGAGCCATaGGGATCCGGTCGCCATTGG +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAACSLEP*GSGRHW
Trigger: CCAATGGCGACCGGATCCCCATGGCTCCAAACTGCA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCATCCATATTCTGGGGTaGTGTCAGGTGGGTACACAT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPIHILG*CQVGTH
Trigger: ATGTGTACCCACCTGACACCACCCCAGAATATGGAT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCGTCCACCCCCAGGATaGATCATGGCTGCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAARPPPG*IMAAKN
Trigger: GTTCTTGGCAGCCATGATCCATCCTGGGGGTGGACG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCACAGGTTGTCATTGGTaGGCGGGCGCCTGGGATGCT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFTGCHW*AGAWDA
Trigger: AGCATCCCAGGCGCCCGCCCACCAATGACAACCTGT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCAGTATTCATTCTGTTaGCCAGGCTCTGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPQYSFC*PGSALP
Trigger: TGGAAGTGCAGAGCCTGGCCAACAGAATGAATACTG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACTCGCATGGACCTCCTaGCCCTGGCCCATGGACACA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGLAWTS*PWPMDT
Trigger: TGTGTCCATGGGCCAGGGCCAGGAGGTCCATGCGAG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCCACCGCATATAGCATaGGCTTCCACTGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFPPHIA*ASTGPP
Trigger: TGGGGGCCCAGTGGAAGCCCATGCTATATGCGGTGG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGCCGCTCCTGGACAGTaGAGTGTAGGAAGGCCACCG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGAAPGQ*SVGRPP
Trigger: CGGTGGCCTTCCTACACTCCACTGTCCAGGAGCGGC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCATCCTCATTTCTCTGTaGGGCTTTCCACAATCTGTC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPILISL*GFPQSV
Trigger: GACAGATTGTGGAAAGCCTCACAGAGAAATGAGGAT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACCTTGGGCCATCGGCTaGACCAGTCGATGGTGCATC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIPWAIG*TSRWCI
Trigger: GATGCACCATCGACTGGTTCAGCCGATGGCCCAAGG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACAAAGGCCTCCCCAGTaGAAGGCTGTCCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLQRPPQ*KAVLQV
Trigger: CACCTGGAGGACAGCCTTTCACTGGGGAGGCCTTTG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACAGGGGCTCCTCCCATaGTCATGCCCAGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLQGLLP*SCPELE
Trigger: CTCAAGCTCTGGGCATGAGCATGGGAGGAGCCCCTG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATGGTGGTCTCTGTCTTaGCTGTCCCTGCGGGACCAG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIWWSLS*LSLRDQ
Trigger: CTGGTCCCGCAGGGACAGGCAAGACAGAGACCACCA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGGGACTGGCTCTTTTTaGTGCTCCCAGGGTGCGCAG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLGTGSF*CSQGAQ
Trigger: CTGCGCACCCTGGGAGCAGCAAAAAGAGCCAGTCCC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTCTTTCTCCAGTTCCTaGTTCTCCGTGAGAATGACT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSFSSS*FSVRMT
Trigger: AGTCATTCTCACGGAGAAGCAGGAACTGGAGAAAGA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTGCGGATCACAGGTTTaGCCTCCGCAGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFCGSQV*PPQSSA
Trigger: TGCTGAGGACTGCGGAGGCCAAACCTGTGATCCGCA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAACAGCCAGGCCCGGCTaGAGGGCTTCATCCACTCTA +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKITARPG*RASSTL
Trigger: TAGAGTGGATGAAGCCCTCCAGCCGGGCCTGGCTGT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATGCAGTTGCTGTCAATaGCAGAGAGCTGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKICSCCQ*QRAGPG
Trigger: GCCGGGGCCAGCTCTCTGCCATTGACAGCAACTGCA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGCAAATGGGCCTGGATaGTGTGGGAGTCCGATGCCT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFANGPG*CGSPMP
Trigger: AGGCATCGGACTCCCACACCATCCAGGCCCATTTGC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCAGTTTCCAAGGAGGGTaGTTAATTAAGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSFQGG*LIKPAS
Trigger: GGAAGCTGGCTTAATTAACCACCCTCCTTGGAAACT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCATTTCTCTTCTGCGATaGCTTTGTCCTTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPISLLR*LCPWRC
Trigger: GCATCTCCAAGGACAAAGCCATCGCAGAAGAGAAAT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCCTGCCAGGAAGGCATaGTGCAGCCTTTGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFPARKA*CSLCPR
Trigger: ACGTGGACAAAGGCTGCACCATGCCTTCCTGGCAGG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAGCATGGGCTTCCACTaGGCCCCCACACTCACATCC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKISMGFH*APTLTS
Trigger: GGATGTGAGTGTGGGGGCCCAGTGGAAGCCCATGCT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGAGCCCAAACACCTCTaGGCTGTCATAGGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAEPKHL*AVIGRQ
Trigger: TTGCCTGCCTATGACAGCCCAGAGGTGTTTGGGCTC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCAAAATGTTCATGGGCTaGAATGGTCCCATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPKMFMG*NGPIFC
Trigger: GCAGAAGATGGGACCATTCCAGCCCATGAACATTTT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTGCATAACAATCTCCTaGGGCTGGCTCCAGATGGTG +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAACITIS*GWLQMV
Trigger: CACCATCTGGAGCCAGCCTCAGGAGATTGTTATGCA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTCTCCAACACAACACTaGACCACATTTGGTATCTCA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSPTQH*TTFGIS
Trigger: TGAGATACCAAATGTGGTTCAGTGTTGTGTTGGAGA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTCAGCTACCCCATCCTaGAAAGAGCCCATGCACTGG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSATPS*KEPMHW
Trigger: CCAGTGCATGGGCTCTTTTCAGGATGGGGTAGCTGA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACTCCCATGGAGTCCATaGTGTACTTGCGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLLPWSP*CTCEPG
Trigger: CCCAGGCTCGCAAGTACATCATGGACTCCATGGGAG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACAGTGTTCAGGGGCCTaGGCTGTCTTGAGGTCCACA +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIQCSGA*AVLRST
Trigger: TGTGGACCTCAAGACAGCTCAGGCCCCTGAACACTG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCACAGGAAGCTACAATTaGAAACAGATAGTCATGCCG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPTGSYN*KQIVMP
Trigger: CGGCATGACTATCTGTTTGCAATTGTAGCTTCCTGT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAGCCTTTGTTTCCAGTaGTCCAGCTCTGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGSLCFQ*SSSARG
Trigger: GCCCCGAGCAGAGCTGGAGCACTGGAAACAAAGGCT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGCTTCCTTGGGCAGCTaGTTGGCAATGTCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGASLGS*LAMSPP
Trigger: GGGAGGAGACATTGCCAAGCAGCTGCCCAAGGAAGC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTAAGTGTGGCAGTAGCTaGCCCATGGTCTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAKCGSS*PMVSSP
Trigger: TGGAGATGAGACCATGGGGCAGCTACTGCCACACTT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCAGAATAATGGAGATTTaGTGGGCTGCAACTGACAGA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPRIMEI*WAATDR
Trigger: TCTGTCAGTTGCAGCCCAGCAAATCTCCATTATTCT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGAACTGACAGAATGTTaGGGAGACCAAAGTCATAGT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPELTEC*GDQSHS
Trigger: ACTATGACTTTGGTCTCCGCAACATTCTGTCAGTTC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCACTGGCTCTTTTTGCTaGTCCCAGGGTGCGCAGAAC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFTGSFC*SQGAQN
Trigger: GTTCTGCGCACCCTGGGAGCAGCAAAAAGAGCCAGT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTTCAGTTTGGTCATCTaGCACAGACGGCGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFFSLVI*HRRRVR
Trigger: CCTGACGCGCCGTCTGTGGCAGATGACCAAACTGAA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTGCCAGTGCCACGGATaGTCTCGTTATAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAACQCHG*SRYRAA
Trigger: TGCAGCTCTATAACGAGAGCATCCGTGGCACTGGCA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGTGATCCCTTTGCCTTaGTGGCCAGCAGTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFVIPLP*WPAVLY
Trigger: GTACAGGACTGCTGGCCAGCAAGGCAAAGGGATCAC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTAAAAGCAGTGGGGTCTaGCATTGGAAACCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAKSSGV*HWKPRR
Trigger: CCTCCTGGGTTTCCAATGGCAGACCCCACTGCTTTT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCAGCATCTTCCACTTCTaGTTTGTTCAGGTCCAAACA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSIFHF*FVQVQT
Trigger: TGTTTGGACCTGAACAAACCAGAAGTGGAAGATGCT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTTGGCCAGACGTCGGTaGAAAGTTTCAAATTTTCCA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPLARRR*KVSNFP
Trigger: TGGAAAATTTGAAACTTTCCACCGACGTCTGGCCAA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAGATCTTCCCAGCTATaGGGGGCTGGTTGCGAGCCA +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIRSSQL*GAGCEP
Trigger: TGGCTCGCAACCAGCCCCCCATAGCTGGGAAGATCT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCTGGAAGAGTTGCATTaGCTGCTCCAGCCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAALEELH*LLQPVE
Trigger: TTCCACAGGCTGGAGCAGCCAATGCAACTCTTCCAG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACCTTGGGCAGCTGCTTaGCAATGTCTCCTCCCACGA +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIPWAAA*QCLLPR
Trigger: TCGTGGGAGGAGACATTGCCAAGCAGCTGCCCAAGG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGCTTTCATCAGGGTGTaGATGCAGGTGGTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAAFIRV*MQVVFP
Trigger: AGGGAAGACCACCTGCATCCACACCCTGATGAAAGC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACCCGAGCAAAGAGGTTaGAGACCTCGCCCGATGACA +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIPEQRG*RPRPMT
Trigger: TGTCATCGGGCGAGGTCTCCAACCTCTTTGCTCGGG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACAAGCTCTGCTTGCTTaGCATCCAGCTCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLQALLA*HPAQPG
Trigger: CCCAGGCTGAGCTGGATGCCAAGCAAGCAGAGCTTG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCCTGGCCCTGGCCCATaGACACATAGCGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFPGPGP*THSVFL
Trigger: TAGAAACACGCTATGTGTCCATGGGCCAGGGCCAGG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGCGTCAGAACTCGGGTaGCACTCTGCTTCCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGASELG*HSASRV
Trigger: AACTCTGGAAGCAGAGTGTCACCCGAGTTCTGACGC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTTTCAAACAACTGGATaGCTTTCAGTTTCCAAGGAG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPFQTTG*LSVSKE
Trigger: CTCCTTGGAAACTGAAAGTCATCCAGTTGTTTGAAA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATCTGCACCTCAGCTTTaGCCTTCTCTGCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKISAPQL*PSLQPV
Trigger: CACAGGCTGCAGAGAAGGTCAAAGCTGAGGTGCAGA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGCATTGACCCTCCTCTaGAACAGCAGCAGCACACAG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGALTLL*NSSSTQ
Trigger: CTGTGTGCTGCTGCTGTTTCAGAGGAGGGTCAATGC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATGCTACGGACAAGGCTaGGTACCCTCTGCATCCTGT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGCYGQG*VPSASC
Trigger: ACAGGATGCAGAGGGTACTCAGCCTTGTCCGTAGCA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAGCCTGTGGAATAGCTaGCGGGCCCACAAGATCTTC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGSLWNS*RAHKIF
Trigger: GAAGATCTTGTGGGCCCGGCAGCTATTCCACAGGCT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCAAACAACTCCCCTGTaGCTGGAGCCTTCACCAATA +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAQTTPL*LEPSPI
Trigger: TATTGGTGAAGGCTCCAGGCACAGGGGAGTTGTTTG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTGTGGGAGAAGTGAATaGGTCTGCGAATGGCCTCAA +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAACGRSE*VCEWPQ
Trigger: TTGAGGCCATTCGCAGACGCATTCACTTCTCCCACA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGGCCAGAGTGACACTTaGCCGGAAAATGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIGQSDT*PENGQM
Trigger: CATCTGCCCATTTTCCGGGCAAGTGTCACTCTGGCC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCCAGACTTCCACATTaGCCTCTGCCATCACAGGCT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLARLPH*PLPSQA
Trigger: AGCCTGTGATGGCAGAGGGCAATGTGGAAGTCTGGC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACTCCTCCCATGCTCATaGCCAGAGCTTGAGCCAATG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLLLPCS*PELEPM
Trigger: CATTGGCTCAAGCTCTGGGCATGAGCATGGGAGGAG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCCAGGACCCAGACTGTaGCAGTCCTTTGAATATCCG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFPGPRL*QSFEYP
Trigger: CGGATATTCAAAGGACTGGCACAGTCTGGGTCCTGG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATCATCAGGGTGTGGATaGAGGTGGTCTTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLSSGCG*RWSSLT
Trigger: GGTCAGGGAAGACCACCTGCATCCACACCCTGATGA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGAGGACCATATGTCGTaGCCATGCGTTTATCCACGT +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAEDHMS*PCVYPR
Trigger: ACGTGGATAAACGCATGGGCACGACATATGGTCCTC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCCATGTCCATGCCAGTaGCACGGATGCTCTCGTTAT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFPCPCQ*HGCSRY
Trigger: ATAACGAGAGCATCCGTGGCACTGGCATGGACATGG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCCAGGAAGGCATGGTaGAGCCTTTGTCCACGTCAA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLARKAW*SLCPRQ
Trigger: TTGACGTGGACAAAGGCTGCACCATGCCTTCCTGGC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGGCCTGTTCATACTCTaGCTGCACCACATCAAGCTC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFGLFIL*LHHIKL
Trigger: GAGCTTGATGTGGTGCAGGCAGAGTATGAACAGGCC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCATCCTTCTTTTGTTTaGAGTTACATCCTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPHPSFV*SYILQE
Trigger: CTCTTGGAGGATGTAACTGCAAACAAAAGAAGGATG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAGGCTGAGTACCCTCTaGATCCTGTCAATCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFRLSTL*ILSISC
Trigger: GCAGGAGATTGACAGGATGCAGAGGGTACTCAGCCT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTTCTGGCATCAAACATaGAATCCAGAGCATCTCTTA +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPFWHQT*NPEHLL
Trigger: TAAGAGATGCTCTGGATTGCATGTTTGATGCCAGAA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCCATTGTTGGTGATATaGGCTTTACATGCAGATATC +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPPLLVI*ALHADI
Trigger: GATATCTGCATGTAAAGCCCATATCACCAACAATGG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGGACTGGCGTTCTCATaGCAGACGTTTTCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIGLAFS*QTFSAA
Trigger: AGCAGCCGAAAACGTCTGCCATGAGAACGCCAGTCC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCCACTTGGAAGTCGGTaGAGATCTGCTGCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFPLGSR*RSAAPL
Trigger: TAAGGGAGCAGCAGATCTCCACCGACTTCCAAGTGG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAGCGCTTGGCTTCCTTaGGCAGCTGCTTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKISAWLP*AAAWQC
Trigger: ACATTGCCAAGCAGCTGCCCAAGGAAGCCAAGCGCT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCCTAAAAACTCATTCTaGTATATGAAAGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPPKNSF*YMKATS
Trigger: CGACGTGGCTTTCATATACCAGAATGAGTTTTTAGG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCCTCTGAAACATCACTaGGGTGGTCGCCGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAPLKHH*GGRRRK
Trigger: TTTTCTTCGGCGACCACCCCAGTGATGTTTCAGAGG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCCGAGCACTTATTTCTaGGGTATAGGCTGGATTCGG +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAPSTYF*GIGWIR
Trigger: CCGAATCCAGCCTATACCCCAGAAATAAGTGCTCGG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAACTTGCGCCGCTCCTaGACAGTGGAGTGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLNLRRS*TVECRK
Trigger: CTTCCTACACTCCACTGTCCAGGAGCGGCGCAAGTT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAATGTCAGCATTGGGGTaGAGCCCAAACACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGMSALG*SPNTSG
Trigger: CCCAGAGGTGTTTGGGCTCCACCCCAATGCTGACAT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGTCATCCAAAAGCAGTaGGGTCTGCCATTGGAAACC +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAVIQKQ*GLPLET
Trigger: GGTTTCCAATGGCAGACCCCACTGCTTTTGGATGAC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAACTGTTCTGTGCACCTaGCAAGATGCCCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGTVLCT*QDAHKA
Trigger: GGCTTTGTGGGCATCTTGTCAGGTGCACAGAACAGT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTTCCTTCCGTAGCTaGCTGTTCTCAGCAAGGATC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLASFRS*LFSARI
Trigger: GATCCTTGCTGAGAACAGTCAGCTACGGAAGGAAGC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCACTCAATCAAGTCATTaGCCCGGTCAAGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFTQSSH*PGQAAA
Trigger: AGCTGCTGCTTGACCGGGTCAATGACTTGATTGAGT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCTCCCGAGAGGAGATTaGCAGAATCCGATCATAGAT +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAALPRGD*QNPIID
Trigger: ATCTATGATCGGATTCTGTCAATCTCCTCTCGGGAG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACCAGTACCTCCATCTTaGACTCCAGGTTCTGGATGC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIPVPPS*TPGSGC
Trigger: GCATCCAGAACCTGGAGTTCAAGATGGAGGTACTGG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGTCAATGGTATAGGATaGGAGGAAGTGTTCCGACAC +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAVNGIG*EEVFRH
Trigger: GTGTCGGAACACTTCCTCTCATCCTATACCATTGAC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCTGATCAAGGATGTCTaGAAACTGTTTAAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPLIKDV*KLFKFA
Trigger: AGCAAACTTAAACAGTTTTCAGACATCCTTGATCAG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTCTTTCCCAAAGCAATaGTGGAATCTGTGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSFPKQ*WNLWGR
Trigger: CCGACCCCACAGATTCCATCATTGCTTTGGGAAAGA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTGGGTTTGGATTCAATaGGTTTCATGTTCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPWVWIQ*VSCSFC
Trigger: ACAAAAGGAACATGAAACTCATTGAATCCAAACCCA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAACAGTGCCCTGCTTCTaGTCCCTCCACATCCTGATA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLTVPCF*SLHILI
Trigger: TATCAGGATGTGGAGGGAGCAGAAGCAGGGCACTGT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGTGCACCTGACAAGATaGCCACAAAGCCTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLVHLTR*PQSLPE
Trigger: CTCTGGAAGGCTTTGTGGGCATCTTGTCAGGTGCAC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCTCAGCACAAAGGGATaGTGCTGGAAGAGTTGCATT +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAALSTKG*CWKSCI
Trigger: AATGCAACTCTTCCAGCAGCATCCCTTTGTGCTGAG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGCTTTGTTCAGCGTCTaGTGTATGTCTTCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFALFSV*CMSSRA
Trigger: TGCCCTGGAAGACATACAGCAGACGCTGAACAAAGC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTTCCACATTGCCCTCTaGCATCACAGGCTTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFFHIAL*HHRLVQ
Trigger: TTGGACAAGCCTGTGATGGCAGAGGGCAATGTGGAA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAGAACACCATGTCCATaGCAGTGCCACGGATGCTCT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLRTPCP*QCHGCS
Trigger: AGAGCATCCGTGGCACTGGCATGGACATGGTGTTCT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAAGCAGAGCACAATGTaGAGGTTTCCTCGGACCCTG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLKQSTM*RFPRTL
Trigger: CAGGGTCCGAGGAAACCTGCACATTGTGCTCTGCTT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAGCGTGGATGCTGTCTaGATCTTATGCCTACACCGG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKISVDAV*ILCLHR
Trigger: CCGGTGTAGGCATAAGATGCAGACAGCATCCACGCT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATCGCTCCTTTTCACCTaGCAAGCCACTGATGAGCGT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLSLLFT*QATDER
Trigger: ACGCTCATCAGTGGCTTGGCAGGTGAAAAGGAGCGA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAACATGTCCCGCTTCTaGAAGAGGGCAGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLNMSRF*KRAAAN
Trigger: GTTTGCAGCTGCCCTCTTCCAGAAGCGGGACATGTT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTCATTTCCTCCAGGATaGCGTGGATGCGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSFPPG*RGCGTQ
Trigger: TTGAGTTCCGCATCCACGCCATCCTGGAGGAAATGA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCACTTGCCCGGAAAATaGGCAGATGGTTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFHLPGK*ADGSAL
Trigger: CAAAGCAGAACCATCTGCCCATTTTCCGGGCAAGTG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAACTGCTGGCAGTCTTaGAGGAACACCTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGNCWQS*RNTSTV
Trigger: CACAGTGGAGGTGTTCCTCCAAGACTGCCAGCAGTT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCAAGACTTATCTATATTaGAAAAGCGCTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPKTYLY*KSAWLP
Trigger: AGGAAGCCAAGCGCTTTTCCAATATAGATAAGTCTT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACCTGTGAGCGACTTCTaGCAGATTTCCAACTGGTCC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIPVSDF*QISNWS
Trigger: GGACCAGTTGGAAATCTGCCAGAAGTCGCTCACAGG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATTCAGCAAATGGGCCTaGATGGTGTGGGAGTCCGAT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGFSKWA*MVWESD
Trigger: ATCGGACTCCCACACCATCCAGGCCCATTTGCTGAA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACTGTATCCGTGGGACTaGCTCTTTTTGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGLYPWD*LFLLLP
Trigger: TGGGAGCAGCAAAAAGAGCCAGTCCCACGGATACAG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACCCCAGGATGGATCATaGCTGCCAAGAACTGGATGT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGPQDGS*LPRTGC
Trigger: ACATCCAGTTCTTGGCAGCCATGATCCATCCTGGGG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGGAGCATCTTCAGTTTaGTCATCTGCCACAGACGGC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLGASSV*SSATDG
Trigger: GCCGTCTGTGGCAGATGACCAAACTGAAGATGCTCC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGATGAGTGGTGTCCGTaGGTCAGATTCCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIDEWCP*VRFLPC
Trigger: ACATGGGAGGAATCTGACCCACGGACACCACTCATC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCAGTCCCATTGTTGGTaGTATGGGCTTTACATGCAG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFQSHCW*YGLYMQ
Trigger: CTGCATGTAAAGCCCATATCACCAACAATGGGACTG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCTCTGCAGGTCATTATaGAGCTCATTAATCCGCTTG +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAALCRSL*SSLIRL
Trigger: CAAGCGGATTAATGAGCTTCATAATGACCTGCAGAG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACCCTTCTCTTCTTCCTaGAGTGTTACCGCTAGGACT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLPFSSS*SVTART
Trigger: AGTCCTAGCGGTAACACTTCAGGAAGAAGAGAAGGG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACTCCACCTCAGCGTCTaGATCACTGTCTTCGTTGTT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLLHLSV*ITVFVV
Trigger: AACAACGAAGACAGTGATTCAGACGCTGAGGTGGAG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTGTTGTCCCACTCATTaGTCACTTGCCTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAACCPTH*SLASAF
Trigger: AAAAGCTGAGGCAAGTGATCAATGAGTGGGACAACA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCATGTGCCCGTGTCATaGTCTTCACCCAAGACTTAT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFHVPVS*SSPKTY
Trigger: ATAAGTCTTGGGTGAAGATCATGACACGGGCACATG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACCTCAACCTGTTTACTaGTTGCTGTCTCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGPQPVY*LLSPAQ
Trigger: CTGAGCTGGAGACAGCAATCAGTAAACAGGTTGAGG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGTCCATGGAAGCATCTaGAGGCAAGGTACAGTTGAA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFVHGSI*RQGTVE
Trigger: TTCAACTGTACCTTGCCTTCAGATGCTTCCATGGAC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTTTATCAGAGCATCTTaGACTTCCTCCGAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFFIRAS*TSSEKP
Trigger: GGGCTTCTCGGAGGAAGTTCAAGATGCTCTGATAAA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACCTCCTCTACCAAACTaGCAACAGCCTTATCGAACC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGPPLPN*QQPYRT
Trigger: GGTTCGATAAGGCTGTTGTCAGTTTGGTAGAGGAGG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAGGTATAGCCAGCGATaGATGAAGCCAACCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFRYSQR*MKPTLS
Trigger: TGACAAGGTTGGCTTCATTCATCGCTGGCTATACCT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAACTTGATGGACATCTaGAGGAGAGTGATGGGGAAC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFNLMDI*RRVMGN
Trigger: GTTCCCCATCACTCTCCTTCAGATGTCCATCAAGTT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAAGAGTTGCATTGGCTaGTCCAGCCTGTGGAATAGC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIKSCIG*SSLWNS
Trigger: GCTATTCCACAGGCTGGAGCAGCCAATGCAACTCTT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCTGTGGGGCTGTGATTaGTTTGGGATTCATCCTCAT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFLWGCD*FGIHPH
Trigger: ATGAGGATGAATCCCAAAGCAATCACAGCCCCACAG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAGGATGGATCATGGCTaGCAAGAACTGGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLRMDHG*QELDVH
Trigger: GTGGACATCCAGTTCTTGGCAGCCATGATCCATCCT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATTCCTGCCAGTTCTTTaGTCAAGGCTGCCACCGATT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLFLPVL*SRLPPI
Trigger: AATCGGTGGCAGCCTTGAGCAAAGAACTGGCAGGAA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGTCCTTGGAGATaGTGTCGACAATGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKILCPWR*CRQWPV
Trigger: CACAGGCCATTGTCGACAGCATCTCCAAGGACAAAG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATACCCATCCTCCATTTaGCATGGTCTGGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLYPSSI*HGLVQQ
Trigger: CTGTTGCACCAGACCATGGCAAATGGAGGATGGGTA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTGCAGTATTGTTTTCTaGAAAAATCCTTATGACAGG +
Preference number: 4 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPCSIVF*KNPYDR
Trigger: CCTGTCATAAGGATTTTTGCAGAAAACAATACTGCA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACGGTCACGAACACCTTaGGCTTTTTCATCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGRSRTP*AFSSFR
Trigger: CCGGAAAGATGAAAAAGCCCAAGGTGTTCGTGACCG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAAACCTTCAGAAGCTTaGACTTGGCCGCAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGKPSEA*TWPQQA
Trigger: TGCTTGCTGCGGCCAAGTCCAAGCTTCTGAAGGTTT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGCAGCAACAATGTCCTaGTACTTAGTCGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFAATMS*YLVAMS
Trigger: AGACATGGCGACTAAGTACCAGGACATTGTTGCTGC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGCATCTGTGTTCTGGTaGTTAAAGTGGGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIASVFW*LKWESS
Trigger: GCTGCTCTCCCACTTTAACCACCAGAACACAGATGC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGAATGCGTCTGCGAATaGCCTCAAGTGTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGECVCE*PQVYSW
Trigger: CCAGGAATACACTTGAGGCCATTCGCAGACGCATTC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCGGAAAATGGGCAGATaGTTCTGCTTTGCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFRKMGR*FCFALD
Trigger: GTCTAAGGCAAAGCAGAACCATCTGCCCATTTTCCG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACATGCATCTTTCTCTTaGACAACAGCTCGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIHASFS*TTARCS
Trigger: GGAGCAGCGAGCTGTTGTCCAAGAGAAAGATGCATG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAGTGTCGTTCCACCATaGCGTTACTGGCCATGTACT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLSVVPP*RYWPCT
Trigger: AGTACATGGCCAGTAACGCCATGGTGGAACGACACT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTGGATTCTGTATCCGTaGGACTGGCTCTTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFWILYP*DWLFLL
Trigger: CAGCAAAAAGAGCCAGTCCCACGGATACAGAATCCA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTTCCACAATCTGTCATaGCTTTCATCAGGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAFHNLS*LSSGCG
Trigger: TCCACACCCTGATGAAAGCCATGACAGATTGTGGAA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATCGACCAAACATCTGTaGGGCTGTGATTGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKISTKHL*GCDCFG
Trigger: CCCAAAGCAATCACAGCCCCACAGATGTTTGGTCGA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAACAATCTTGCAGTTTaGAGCCATGGGGATCCGGTC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLNNLAV*SHGDPV
Trigger: GACCGGATCCCCATGGCTCCAAACTGCAAGATTGTT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACCACACTCCACATCATaGCAAAGACAAACAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLPHSTS*QRQTAS
Trigger: GGAGGCTGTTTGTCTTTGCCATGATGTGGAGTGTGG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTGGGTACACATATTCTaGGGTACACAGGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFWVHIF*GTQAPM
Trigger: CATTGGAGCCTGTGTACCCCAGAATATGTGTACCCA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATCTCTTCAAGCGCTGTaGTATGTCATTGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKISLQAL*YVIAST
Trigger: GGTGGACGCAATGACATACCACAGCGCTTGAAGAGA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTGGCTCATAAAGCTTTaGCATTTCAGCATCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAWLIKL*HFSISL
Trigger: GAGGCTGATGCTGAAATGCCAAAGCTTTATGAGCCA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATGTCTGCTTTCTCATTaGCCACCTGCAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLCLLSH*PPAAPS
Trigger: AGAAGGAGCTGCAGGTGGCCAATGAGAAAGCAGACA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACTTGCACTATCAAGTTaGCCTTCAGAGGGAGCACCT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGLALSS*PSEGAP
Trigger: AGGTGCTCCCTCTGAAGGCCAACTTGATAGTGCAAG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATCTGCTTCTCTGCCATaGCCTGTTCATACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKISASLP*PVHTLP
Trigger: AGGCAGAGTATGAACAGGCCATGGCAGAGAAGCAGA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTCATTTGGAAGGCCTTaGAGGTTCCATTCGCTGATA +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAASFGRP*RFHSLI
Trigger: TATCAGCGAATGGAACCTCCAAGGCCTTCCAAATGA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGGACAGGTCATCATTTaGAAGGCCTTGGAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGGQVII*KALEVP
Trigger: TGGAACCTCCAAGGCCTTCCAAATGATGACCTGTCC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACCTCTTGCTTGTAATTaGGCTCTTGACAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGPLACN*ALDRPG
Trigger: GCCAGGTCTGTCAAGAGCCCAATTACAAGCAAGAGG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
3UTR CAA 72 bp TCCAAGGAAGTGTATGGGATGATGTCATCTCATTCATaGCACACAACACAGTCTGACTTATATATGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SKEVYGMMSSHS*HTTQSDLYMPS
Trigger: GCTGGGCATATATAAGTCAGACTGTGTTGTGTGCAATGAATGAGATGACATCATCCCATACACTTCCTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCACAGGTAGACCCAACTaGGACATGCATTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFTGRPN*DMHCVS
Trigger: AGAAACACAATGCATGTCTCAGTTGGGTCTACCTGT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACACTGCACCCATTTTTaGATCTGGGCTTTGAATGGC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGHCTHF*IWALNG
Trigger: GCCATTCAAAGCCCAGATTCAAAAATGGGTGCAGTG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACTCAATGATGTCTGTTaGGTTGGAAAGGCACTGCAC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGLNDVC*VGKALH
Trigger: GTGCAGTGCCTTTCCAACTCAACAGACATCATTGAG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAGCTCTAGGAAGGCCTaGTTGGTCTTCTGCATGATT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLSSRKA*LVFCMI
Trigger: AATCATGCAGAAGACCAATCAGGCCTTCCTAGAGCT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGAACCATTGCATCTATaGAGAACACCATGTCCATGC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFEPLHL*RTPCPC
Trigger: GCATGGACATGGTGTTCTTCATAGATGCAATGGTTC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAATAGCCAGCGATGAATaGAGCCAACCTTGTCAAGCT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLIASDE*SQPCQA
Trigger: AGCTTGACAAGGTTGGCTTCATTCATCGCTGGCTAT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCCTGTGCCTTCATTGTaGCTTCCTTTAAAACCGTGT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFPVPSL*LPLKPC
Trigger: ACACGGTTTTAAAGGAAGTCACAATGAAGGCACAGG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACAATTTTCACCGCATTaGCCCTCCTCTGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLQFSPH*PSSETA
Trigger: TGCTGTTTCAGAGGAGGGTCAATGCGGTGAAAATTG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAAATGGACCAGAGTATaGCAGAAAAGCCGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLKWTRV*QKSRSQ
Trigger: CTGGCTACGGCTTTTCTGTCATACTCTGGTCCATTT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCACATCCTCCAAGAGATaGGTTCGTTCTTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFTSSKR*VRSFSS
Trigger: ACTGGAGAAAGAACGAACTCATCTCTTGGAGGATGT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGTATTCCTCCCGGGCTaGGTTAATTTGAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAVFLPG*VNLNFC
Trigger: ACAGAAATTCAAATTAACTCAGCCCGGGAGGAATAC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACTCGGGCAGCATACTTaGATACCTCATAGGTCATGT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLLGQHT*IPHRSC
Trigger: ACATGACCTATGAGGTATTCAAGTATGCTGCCCGAG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATCAGAAGGAGGCGTCTaGAGCAGTCGAGAGATTTAT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGSEGGV*SSREIY
Trigger: ATAAATCTCTCGACTGCTTCAGACGCCTCCTTCTGA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAACATCTGAAGGAGAGTaGTGGGGAACTGCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGTSEGE*WGTACE
Trigger: TTCACAAGCAGTTCCCCATCACTCTCCTTCAGATGT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTAGGATACACCCTTCTTaGCATCCATATCATCTAGGT +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAARIHPS*HPYHLG
Trigger: ACCTAGATGATATGGATGTCAAGAAGGGTGTATCCT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATGTCAATCTCCTGCCTaGGGAAAATGTTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGCQSPA*GKCSWA
Trigger: AGCCCATGAACATTTTCCTCAGGCAGGAGATTGACA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACTATCCTGTTATAGCTaGGGATCACAGGTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGLSCYS*GSQVWP
Trigger: AGGCCAAACCTGTGATCCGCAGCTATAACAGGATAG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGCTGACAAAGAGCCATaGTACTCATTTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIADKEP*YSFPPG
Trigger: TCCTGGAGGAAATGAGTAGCATGGCTCTTTGTCAGC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCTTCTTTCTTGCAGTTaGTGTCAATGGCAGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFLLSCS*CQWQRA
Trigger: AGCTCTCTGCCATTGACAGCAACTGCAAGAAAGAAG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGGGTTCTTGAATATTTaGAGCTGCCTGGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIGFLNI*SCLANH
Trigger: GTGATTCGCCAGGCAGCTGCAAATATTCAAGAACCC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAACCTTGTCAAGCTCTaGTTTCCTGATCCACCCACA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGNLVKL*FPDPPT
Trigger: TGTGGGTGGATCAGGAAAGCAGAGCTTGACAAGGTT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACCTGAAAAGAGCCCATaGACTGGACCAATTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIPEKSP*TGPIPS
Trigger: AGAAGGAATTGGTCCAGTGCATGGGCTCTTTTCAGG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACTCCTTCTCTTTTCCTaGCAGTTCTTTGCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLLLLFS*QFFAQG
Trigger: GCCTTGAGCAAAGAACTGGCAGGAAAAGAGAAGGAG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATTCTCATTGGCCACCTaGAGCTCCTTCTCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIFSLAT*SSFSFP
Trigger: AGGAAAAGAGAAGGAGCTGCAGGTGGCCAATGAGAA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATGTTCATACTCTGCCTaGACCACATCAAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKICSYSA*TTSSSA
Trigger: AGCAGAGCTTGATGTGGTGCAGGCAGAGTATGAACA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAACTGATGAGCGTGGATaGTGTCTGCATCTTATGCCT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGTDERG*CLHLMP
Trigger: AGGCATAAGATGCAGACAGCATCCACGCTCATCAGT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAGGCGGAAAGTGTCATaGACAGTCTCCGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLRRKVS*TVSVSV
Trigger: TACAGAAACGGAGACTGTGCATGACACTTTCCGCCT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCGTGGCATTGAAGTCTaGTTGGTTAAATTCGTAAGG +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAARGIEV*LVKFVR
Trigger: CCTTACGAATTTAACCAAGCAGACTTCAATGCCACG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCCAACCCCTCTATTTTaGAATCTTGCAGGACTGAGT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFPTPLF*NLAGLS
Trigger: ACTCAGTCCTGCAAGATTCCAAAATAGAGGGGTTGG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCACATCAACTGCTCGATaGCAGGAGGCATTTTCAACT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFTSTAR*QEAFST
Trigger: AGTTGAAAATGCCTCCTGCCATCGAGCAGTTGATGT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAATGGCTGCCAAGAACTaGATGTCCACAATGCTAGTG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIMAAKN*MSTMLV
Trigger: CACTAGCATTGTGGACATCCAGTTCTTGGCAGCCAT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCAAAGATCTTGTCCATaGAAGCATCTGAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFQRSCP*KHLKAR
Trigger: CCTTGCCTTCAGATGCTTCCATGGACAAGATCTTTG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAGGCTGTCCTCCAGGTaGTTTCTAAAGTACTTGTGG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGRLSSR*FLKYLW
Trigger: CCACAAGTACTTTAGAAACCACCTGGAGGACAGCCT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTTGACTAGGTTCCTCTaGATGTCAATCTTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAALTRFL*MSIFRV
Trigger: CACCCTAAAGATTGACATCCAGAGGAACCTAGTCAA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAAGTCAAGTCCCAGGTaGCAGTTCTGTAGAAGTACC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIKSSPR*QFCRST
Trigger: GGTACTTCTACAGAACTGCCACCTGGGACTTGACTT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGTTCATGGGCTGGAATaGTCCCATCTTCTGCAATCT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLVHGLE*SHLLQS
Trigger: AGATTGCAGAAGATGGGACCATTCCAGCCCATGAAC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAACCGAGCAGGGATTCTaGCATCAAACATGCAATCCA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGTEQGF*HQTCNP
Trigger: TGGATTGCATGTTTGATGCCAGAATCCCTGCTCGGT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACAAGTCTGTTCGAACTaGCTTCTTGTAGATGGGGCA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGQVCSN*LLVDGA
Trigger: TGCCCCATCTACAAGAAGCCAGTTCGAACAGACTTG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACCTGATAGTAAAACATaGGATGACGGAGTCCACCAA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGPDSKT*DDGVHQ
Trigger: TTGGTGGACTCCGTCATCTCATGTTTTACTATCAGG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGGAATCTTGCAGGACTaGGTATGTCTTGAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGGILQD*VCLEGS
Trigger: ACTACCTTCAAGACATACTCAGTCCTGCAAGATTCC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATGTTTATTAGCTCATTaGCTGCTTCCTCCACAAGGG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKICLLAH*LLPPQG
Trigger: CCCTTGTGGAGGAAGCAGTCAATGAGCTAATAAACA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTATTCTTCGACAACTGTaGGAATGTTTTCCATCTCAG +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAILRQL*ECFPSQ
Trigger: CTGAGATGGAAAACATTCTCACAGTTGTCGAAGAAT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACGGGTCCATAGCATCTaGATTCCTAATAATCCAACC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLRVHSI*IPNNPT
Trigger: GGTTGGATTATTAGGAATTCAGATGCTATGGACCCG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAGGATCTTGTCAGAGTaGTCTGGAAAGAGGTATAGC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIRILSE*SGKRYS
Trigger: GCTATACCTCTTTCCAGATCACTCTGACAAGATCCT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCGGGCTGAGTTAATTTaGATTTCTGTCTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFRAELI*ISVSPE
Trigger: TTCTGGAGAGACAGAAATTCAAATTAACTCAGCCCG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGAAACTCCTCATGTTTaGCTAGGTTCCTCTGGATGT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLETPHV*LGSSGC
Trigger: ACATCCAGAGGAACCTAGTCAAACATGAGGAGTTTC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATATCGTAGTCATCAGTaGCTCTGCCTCCATACTGAA +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIYRSHQ*LCLHTE
Trigger: TTCAGTATGGAGGCAGAGTCACTGATGACTACGATA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGATGAAGAACACACATaGTCCCATAAGAGCAACGTC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGDEEHT*SHKSNV
Trigger: GACGTTGCTCTTATGGGAGCATGTGTGTTCTTCATC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAGAAGTGAATGCGTCTaGGAATGGCCTCAAGTGTAT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIRSECV*EWPQVY
Trigger: ATACACTTGAGGCCATTCGCAGACGCATTCACTTCT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAATCTCCAGAGTTTCTTaGAGCTCATTTTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLISRVS*SSFSST
Trigger: GGTGGAGGAAAATGAGCTGCAAGAAACTCTGGAGAT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCACTCATTGATCACTTaGCTCAGCTTTTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFHSLIT*LSFCSM
Trigger: CATTGAGCAAAAGCTGAGGCAAGTGATCAATGAGTG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGTTTTGGCTGTCCCTTaGTCACCAATTAACAGCACA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLVLAVP*SPINST
Trigger: TGTGCTGTTAATTGGTGAGCAAGGGACAGCCAAAAC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATTGTCCTTTACCTTCTaGACCTCAGCTTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKILSFTF*TSALTF
Trigger: GAAGGTCAAAGCTGAGGTGCAGAAGGTAAAGGACAA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAATGGTCCCATCTTCTaGAATCTCTCCTTCACTTCA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFNGPIF*NLSFTS
Trigger: TGAAGTGAAGGAGAGATTGCAGAAGATGGGACCATT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACGTAATGGCTTTGGATaGGTCAGACCTGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLRNGFG*VRPDEE
Trigger: TTCTTCATCAGGTCTGACCCATCCAAAGCCATTACG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGAGCCAAGTAGTCCGTaGGTTCCTTCAGAGATTTTA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLEPSSP*VPSEIL
Trigger: TAAAATCTCTGAAGGAACCCACGGACTACTTGGCTC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATCCCTTTGGTGCACATaGATAGTAATCAGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGSLWCT*IVIRVS
Trigger: CGAGACTCTGATTACTATCCATGTGCACCAAAGGGA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACCAGATGGCATCAACTaGACCATCAAGAACAATCCA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLPDGIN*TIKNNP
Trigger: TGGATTGTTCTTGATGGTCCAGTTGATGCCATCTGG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATTCACCTGTAGCTTCTaGTGCATCCCTCAAGAAATC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGFTCSF*CIPQEI
Trigger: GATTTCTTGAGGGATGCACCAGAAGCTACAGGTGAA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAAAGAGCCCATGCACTaGACCAATTCCTTCTTGATC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIKEPMH*TNSFLI
Trigger: GATCAAGAAGGAATTGGTCCAGTGCATGGGCTCTTT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAGATGCTGTCGACAATaGCCTGTGCTTTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLRCCRQ*PVLCPL
Trigger: TAAAGGACAAAGCACAGGCCATTGTCGACAGCATCT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAAGCCCATCCTTTGTTaGCTCGAGTTATTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIKPILC*LELFPV
Trigger: GACAGGAAATAACTCGAGCCAACAAAGGATGGGCTT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCATGATGTCACATTTTTaGAGGTTCACCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFMMSHF*RFTFSF
Trigger: GAAGGAGAAGGTGAACCTTCAAAAATGTGACATCAT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTTACAAACAGAGATGTaGTCTTCTCAGAGGTGTTAT +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAALQTEM*SSQRCY
Trigger: ATAACACCTCTGAGAAGATCACATCTCTGTTTGTAA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATTTTGTTTTGTCTCCTaGAAGCAGGATTGGTATCCC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGFCFVS*KQDWYP
Trigger: GGGATACCAATCCTGCTTTCAGGAGACAAAACAAAA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACTATCACTTCTTCATTaGTCGTGTCTTTGGGGAACT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGLSLLH*SCLWGT
Trigger: AGTTCCCCAAAGACACGATCAATGAAGAAGTGATAG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATGTGGTTTAGAGATGTaGTCTGGAGTTCATTTTGGC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGCGLEM*SGVHFG
Trigger: GCCAAAATGAACTCCAGATCACATCTCTAAACCACA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTCTATTTTGGAATCTTaGAGGACTGAGTATGTCTTG +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAASILES*RTEYVL
Trigger: CAAGACATACTCAGTCCTGCAAGATTCCAAAATAGA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGGAAGCCTCAAGACCTaGATGAATTTCTTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGGSLKT*MNFFNL
Trigger: CAGATTGAAGAAATTCATGCAGGTCTTGAGGCTTCC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGATGTATTCAGGCTCTaGATTAATTTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIDVFRL*INFLLQ
Trigger: CTGGAGCAGGAAATTAATGCAGAGCCTGAATACATC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATTGAATATTTGCAGCTaGCTGGCGAATCACAAGATG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLLNICS*LANHKM
Trigger: CATCTTGTGATTCGCCAGGCAGCTGCAAATATTCAA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAATGTTCCCCTTTCTTTaGTTTCAGTGTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGMFPFL*FQCLPP
Trigger: TGGAGGAAGACACTGAAAGCAAAGAAAGGGGAACAT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAACAATCCACTACAGGTaGTTTCTCTTCACCAAACTC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKITIHYR*FLFTKL
Trigger: GAGTTTGGTGAAGAGAAAGCACCTGTAGTGGATTGT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGTGAACAGGAATTTATaGTCTTCATATAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIVNRNL*SSYRPR
Trigger: CCGAGGCCTATATGAAGAGCATAAATTCCTGTTCAC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAGCCATCCACTGTACTaGATTTTGGAATGTTGTATC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSHPLY*ILECCI
Trigger: GATACAACATTCCAAAATGCAGTACAGTGGATGGCT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAATCCTGTCAATCTCCTaGCTGAGGAAAATGTTCATG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIILSIS*LRKMFM
Trigger: CATGAACATTTTCCTCAGGCAGGAGATTGACAGGAT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAGGATACGGTGTAACTaGCAAACCAAAAAGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIRIRCN*QTKKFL
Trigger: GAGGAACTTTTTGGTTTGCCAGTTACACCGTATCCT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAATCTGGGCTTTGAATaGCATATTGTACCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFNLGFE*HIVPVA
Trigger: AGCAACAGGTACAATATGCCATTCAAAGCCCAGATT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCATATTTGCAGCTGCCTaGCGAATCACAAGATGTAAT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFIFAAA*RITRCN
Trigger: ATTACATCTTGTGATTCGCCAGGCAGCTGCAAATAT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAATAATGGAGATTTGCTaGGCTGCAACTGACAGAACT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLIMEIC*AATDRT
Trigger: AGTTCTGTCAGTTGCAGCCCAGCAAATCTCCATTAT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCTTCATCAATCAGTTTaGAAAGATTCATGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFLHQSV*KDSCPA
Trigger: TGCGGGACATGAATCTTTCCAAACTGATTGATGAAG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAAGCGGCTCCTCTTCTaGGTTTTCTTTATCAAACCA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLKRLLF*VFFIKP
Trigger: TGGTTTGATAAAGAAAACCCAGAAGAGGAGCCGCTT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATCCATTCTTTCAATCTaGTTACCCTCAAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGSILSI*LPSRRA
Trigger: TGCTCTTCTTGAGGGTAATCAGATTGAAAGAATGGA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACTCCTCCAGTGTAGGTaGTGTATTTACGATATATGT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGLLQCR*CIYDIC
Trigger: ACATATATCGTAAATACATCACCTACACTGGAGGAG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATCATCCAGTTCTCAATaGTGTCTGTTGAGTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLSSSSQ*CLLSWK
Trigger: TTTCCAACTCAACAGACATCATTGAGAACTGGATGA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGATCACCCCATTCGTTaGTTACAGGCATATTTAAAT +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFDHPIR*LQAYLN
Trigger: ATTTAAATATGCCTGTAATCAACGAATGGGGTGATC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTCATTCCTTGATATCTaGTCAAGGATGTCTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSFLDI*SRMSEN
Trigger: GTTTTCAGACATCCTTGATCAGATATCAAGGAATGA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCAAACATGTTTTCACTaGACCAAACCTTTGCAAATG +
Preference number: 4 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFQTCFH*TKPLQM
Trigger: CATTTGCAAAGGTTTGGTTCAGTGAAAACATGTTTG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATTAGAGCTTGCCTCGTaGTTGGAATCTTTTCAAATG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLLELAS*LESFQM
Trigger: CATTTGAAAAGATTCCAAGCACGAGGCAAGCTCTAA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATTCTTTCTTCTTTCTTaGAGTTGCTGTCAATGGCAG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIFFLLS*SCCQWQ
Trigger: CTGCCATTGACAGCAACTGCAAGAAAGAAGAAAGAA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATGTAGAAGATTCAGCTaGCTCTTTATCTCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKICRRFS*LFISRS
Trigger: GCTTCTTGAGATAAAGAGGCAGCTGAATCTTCTACA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAAGATGTCCCTTTGGTaGACATGGATAGTAATCAGA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGKMSLW*TWIVIR
Trigger: TCTGATTACTATCCATGTGCACCAAAGGGACATCTT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGAGCCGTTTAGTTTGTaGAGCAAACTCTTTACTTTG +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLEPFSL*SKLFTL
Trigger: CAAAGTAAAGAGTTTGCTGCACAAACTAAACGGCTC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACAACCGAGGATCTCTTaGAGTATTGTTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLQPRIS*SIVFCK
Trigger: TTTGCAGAAAACAATACTGCAAGAGATCCTCGGTTG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACCTCAAGTGTATTCCTaGTCACTTTCAAAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLPQVYS*SLSKEH
Trigger: ATGCTCTTTTGAAAGTGACCAGGAATACACTTGAGG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGGATGGGTAAGTTTATaGATGCTATCTCCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIGWVSL*MLSPEF
Trigger: AAACTCTGGAGATAGCATCCATAAACTTACCCATCC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTGTATATAGAGCAATaGAACCCACACGGATGTATT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKILYIEQ*NPHGCI
Trigger: AATACATCCGTGTGGGTTCCATTGCTCTATATACAG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACAAATTCTGGGTTCATaGTCACATTATCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIQILGS*SHYLHQ
Trigger: CTGATGGAGATAATGTGACCATGAACCCAGAATTTG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTAAAAAGTCCAAATTCTaGGTTCATGGTCACATTATC +
Preference number: 4 (lower is better)
Translates to: TETTFTQASHVTLENLAAKKSKF*VHGHII
Trigger: GATAATGTGACCATGAACCCAGAATTTGGACTTTTT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACACATTGTCCACATTTaGCACAAGGATAGATCCATA +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIHIVHI*HKDRSI
Trigger: TATGGATCTATCCTTGTGCCAAATGTGGACAATGTG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACATGCAGATATCATCTaGTTTGTCACCTTTACAAAC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGHADII*FVTFTN
Trigger: GTTTGTAAAGGTGACAAATCAGATGATATCTGCATG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGATTGGTCTTCTGCATaGTTTTCTTATCAAACTTGG +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIDWSSA*FSYQTW
Trigger: CCAAGTTTGATAAGAAAATCATGCAGAAGACCAATC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAGATTCTTCACCATGTaGCTTTCAGGGTCAAATTTT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLRFFTM*LSGSNF
Trigger: AAAATTTGACCCTGAAAGTCACATGGTGAAGAATCT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR TCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACATCTTTTCATTCCTTaGTATCTGATCAAGGATGTC +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLHLFIP*YLIKDV
Trigger: GACATCCTTGATCAGATATCAAGGAATGAAAAGATG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAAGCAAAGGGTTTTGTaGAATAAAGGTCATGATGGT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLKQRVL*NKGHDG
Trigger: ACCATCATGACCTTTATTGCACAAAACCCTTTGCTT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAGATCCTTTGTCATTTaGAGGAATTCTTCACAAGTC +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGRSFVI*RNSSQV
Trigger: GACTTGTGAAGAATTCCTCCAAATGACAAAGGATCT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGAAAATAAAGAATCCTaGACTCAAACTCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGENKES*TQTQEA
Trigger: TGCTTCCTGAGTTTGAGTCCAGGATTCTTTATTTTC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATTCCGACACCTGTTTTaGAATTCTAAGAGTTCATTG +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGFRHLF*NSKSSL
Trigger: CAATGAACTCTTAGAATTCCAAAACAGGTGTCGGAA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATGCGTTTCAAACAACTaGATGACTTTCAGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGCVSNN*MTFSFQ
Trigger: TTGGAAACTGAAAGTCATCCAGTTGTTTGAAACGCA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATTTAGAGATGTGATCTaGAGTTCATTTTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIFRDVI*SSFWLS
Trigger: AGAGAGCCAAAATGAACTCCAGATCACATCTCTAAA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR GCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACTCTGCACTTCCATGTaGTTTTCTTCATATATGAAT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGLCTSM*FSSYMN
Trigger: ATTCATATATGAAGAAAAGCACATGGAAGTGCAGAG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAACAATAATTCCATTCTaGATGGACAGGTCATCATTT +
Preference number: 4 (lower is better)
Translates to: KVTETTFTQASHVTLENLTIIPF*MDRSSF
Trigger: AAATGATGACCTGTCCATCCAGAATGGAATTATTGT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CCA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGTAAAAGGTGAAATCTaGTCCAAACATGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: LTYICPALTEKRRLKYFGVKGEI*SKHVFT
Trigger: AGTGAAAACATGTTTGGACCAGATTTCACCTTTTAC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp ACAGCCTCCCGTGTCTCGTCCCCTCCACCGGAGCTGTCCTTGGGCTaGATGCCCAGGATAGTGTCCAGCACATCCTTGGCCAGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: TASRVSSPPPELSLG*MPRIVSSTSLASLL
Trigger: GAGCAAGCTGGCCAAGGATGTGCTGGACACTATCCTGGGCATCCAGCCCAAGGACAGCTCCGGTGGAGGGGACGAGACACGGGAGGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp GCGCAGCCAGAGTTCCATCCTCCGGCGACCTTCCAACTCCAGGACTaGGCCCACACTCCACATCATGGCAAAGACAAACAGCCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: AQPEFHPPATFQLQD*AHTPHHGKDKQPPQ
Trigger: CTGGGGAGGCTGTTTGTCTTTGCCATGATGTGGAGTGTGGGCGCAGTCCTGGAGTTGGAAGGTCGCCGGAGGATGGAACTCTGGCTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp TTGGCCTCCGCAGTCCTCAGCACAAAGGGATGCTGCTGGAAGAGTTaGATTGGCTGCTCCAGCCTGTGGAATAGCTGCCGGGCCCACAAG +
Preference number: 5 (lower is better)
Translates to: LASAVLSTKGCCWKS*IGCSSLWNSCRAHK
Trigger: CTTGTGGGCCCGGCAGCTATTCCACAGGCTGGAGCAGCCAATGCAACTCTTCCAGCAGCATCCCTTTGTGCTGAGGACTGCGGAGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TGCCCACAAAGCCTTCCAGAGAGCTCAGGAACTCCTGCCGAATGCTaGATGCATCCTGTAGCCCCTCGAGCTCACCCCAGCCATGGCTTG +
Preference number: 5 (lower is better)
Translates to: CPQSLPESSGTPAEC*MHPVAPRAHPSHGL
Trigger: CAAGCCATGGCTGGGGTGAGCTCGAGGGGCTACAGGATGCATCCAGCATTCGGCAGGAGTTCCTGAGCTCTCTGGAAGGCTTTGTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp GGATATTCCACCCCAGAGGACCGAACTTGCGCCGCTCCTGGACAGTaGAGTGTAGGAAGGCCACCGCATATAGCATGGGCTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: GYSTPEDRTCAAPGQ*SVGRPPHIAWASTG
Trigger: CCCAGTGGAAGCCCATGCTATATGCGGTGGCCTTCCTACACTCCACTGTCCAGGAGCGGCGCAAGTTCGGTCCTCTGGGGTGGAATATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp CCTGACAAGATGCCCACAAAGCCTTCCAGAGAGCTCAGGAACTCCTaGCGAATGCTGGATGCATCCTGTAGCCCCTCGAGCTCACCCCAG +
Preference number: 5 (lower is better)
Translates to: PDKMPTKPSRELRNS*RMLDASCSPSSSPQ
Trigger: CTGGGGTGAGCTCGAGGGGCTACAGGATGCATCCAGCATTCGGCAGGAGTTCCTGAGCTCTCTGGAAGGCTTTGTGGGCATCTTGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CCCCCAATATTCAGGGACGTCCAAGTCAGGACAGCCAGGCCCGGCTaGAGGGCTTCATCCACTCTAGCCAGGTGTGGAAACATCAACTGC +
Preference number: 5 (lower is better)
Translates to: PPIFRDVQVRTARPG*RASSTLARCGNINC
Trigger: GCAGTTGATGTTTCCACACCTGGCTAGAGTGGATGAAGCCCTCCAGCCGGGCCTGGCTGTCCTGACTTGGACGTCCCTGAATATTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp GCAGTCCTCAGCACAAAGGGATGCTGCTGGAAGAGTTGCATTGGCTaGTCCAGCCTGTGGAATAGCTGCCGGGCCCACAAGATCTTCCCA +
Preference number: 5 (lower is better)
Translates to: AVLSTKGCCWKSCIG*SSLWNSCRAHKIFP
Trigger: TGGGAAGATCTTGTGGGCCCGGCAGCTATTCCACAGGCTGGAGCAGCCAATGCAACTCTTCCAGCAGCATCCCTTTGTGCTGAGGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp GCCATGGCCTGTTCATACTCTGCCTGCACCACATCAAGCTCTGCTTaGTTGGCATCCAGCTCAGCCTGGGCTTTCTGCAGGTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: AMACSYSACTTSSSA*LASSSAWAFCRSCM
Trigger: CATGCAGGACCTGCAGAAAGCCCAGGCTGAGCTGGATGCCAAGCAAGCAGAGCTTGATGTGGTGCAGGCAGAGTATGAACAGGCCATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp CTCTGCCATGGCCTGTTCATACTCTGCCTGCACCACATCAAGCTCTaGTTGCTTGGCATCCAGCTCAGCCTGGGCTTTCTGCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LCHGLFILCLHHIKL*LLGIQLSLGFLQVL
Trigger: CAGGACCTGCAGAAAGCCCAGGCTGAGCTGGATGCCAAGCAAGCAGAGCTTGATGTGGTGCAGGCAGAGTATGAACAGGCCATGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TCCGGAAACTGGGCTGCAGAGCGCCTAACTCATTCTGAACATCACTaGCCCGGGCCAGCAGCTTCTCCCAAGCATAGCGCAAAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: SGNWAAERLTHSEHH*PGPAASPKHSAKCP
Trigger: TGGACACTTTGCGCTATGCTTGGGAGAAGCTGCTGGCCCGGGCCAGTGATGTTCAGAATGAGTTAGGCGCTCTGCAGCCCAGTTTCCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp TCCAGCTCTGCTCGGGGCCCCACATCGTCCGCTTCCTTCCGTAGCTaGCTGTTCTCAGCAAGGATCTGCTCCATCTGTTTGATCCACACT +
Preference number: 5 (lower is better)
Translates to: SSSARGPTSSASFRS*LFSARICSICLIHT
Trigger: AGTGTGGATCAAACAGATGGAGCAGATCCTTGCTGAGAACAGTCAGCTACGGAAGGAAGCGGACGATGTGGGGCCCCGAGCAGAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp TCCAGCTCAGCCTGGGCTTTCTGCAGGTCCTGCATGGCCAGGATGTaGCGATTCTCTTGCACTATCAAGTTGGCCTTCAGAGGGAGCACC +
Preference number: 5 (lower is better)
Translates to: SSSAWAFCRSCMARM*RFSCTIKLAFRGST
Trigger: GGTGCTCCCTCTGAAGGCCAACTTGATAGTGCAAGAGAATCGTCACATCCTGGCCATGCAGGACCTGCAGAAAGCCCAGGCTGAGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp TCATTGCCCACATCCAGACTGTGCCCAGTGAGAGCAGTGATCCTCTaGCAGTGTCGTTCCACCATGGCGTTACTGGCCATGTACTCCAGC +
Preference number: 5 (lower is better)
Translates to: SLPTSRLCPVRAVIL*QCRSTMALLAMYSS
Trigger: GCTGGAGTACATGGCCAGTAACGCCATGGTGGAACGACACTGGCAGAGGATCACTGCTCTCACTGGGCACAGTCTGGATGTGGGCAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp CCTGACCCACTAGGCCCCAGGGTCATCATGCCGTGCCTCACCCTCTaGGTTTCAAACAACTGGATGACTTTCAGTTTCCAAGGAGGGTGG +
Preference number: 5 (lower is better)
Translates to: PDPLGPRVIMPCLTL*VSNNWMTFSFQGGW
Trigger: CCACCCTCCTTGGAAACTGAAAGTCATCCAGTTGTTTGAAACGCAGAGGGTGAGGCACGGCATGATGACCCTGGGGCCTAGTGGGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp GAAGCCAGGCCCTGTGGTAGAGGACCTCAAACTCCAAGAGGACCTTaGCTATCCTGTTATAGCTGCGGATCACAGGTTTGGCCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: EARPCGRGPQTPRGP*LSCYSCGSQVWPPQ
Trigger: CTGCGGAGGCCAAACCTGTGATCCGCAGCTATAACAGGATAGCCAAGGTCCTCTTGGAGTTTGAGGTCCTCTACCACAGGGCCTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp GACAGCCAGGCCCGGCTGGAGGGCTTCATCCACTCTAGCCAGGTGTaGAAACATCAACTGCTCGATGGCAGGAGGCATTTTCAACTTCAC +
Preference number: 5 (lower is better)
Translates to: DSQARLEGFIHSSQV*KHQLLDGRRHFQLH
Trigger: GTGAAGTTGAAAATGCCTCCTGCCATCGAGCAGTTGATGTTTCCACACCTGGCTAGAGTGGATGAAGCCCTCCAGCCGGGCCTGGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CACACCACCATATGTCCTTCTCAGTCCCGCCCGGAGGCCCTGAGGTaGCTCATTGGCAAACTTGATGGACATCTGAAGGAGAGTGATGGG +
Preference number: 5 (lower is better)
Translates to: HTTICPSQSRPEALR*LIGKLDGHLKESDG
Trigger: CCCATCACTCTCCTTCAGATGTCCATCAAGTTTGCCAATGAGCCACCTCAGGGCCTCCGGGCGGGACTGAGAAGGACATATGGTGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp CACCTTGGGCTTTTTCATCTTTCCGGAGGCAGGATTCACCCCTCCTaGGGAACCACAGTGCCCTGCTTCTGCTCCCTCCACATCCTGATA +
Preference number: 5 (lower is better)
Translates to: HLGLFHLSGGRIHPS*GTTVPCFCSLHILI
Trigger: TATCAGGATGTGGAGGGAGCAGAAGCAGGGCACTGTGGTTCCTCAGGAGGGGTGAATCCTGCCTCCGGAAAGATGAAAAAGCCCAAGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp AGAGAGCTGGCCCCGGCATTGAAGGAAGATGCCAAGGCCTCAGAATaGCCTTCTCTTCTTCCTGAAGTGTTACCGCTAGGACTGGCGTTC +
Preference number: 5 (lower is better)
Translates to: RELAPALKEDAKASE*PSLLPEVLPLGLAF
Trigger: GAACGCCAGTCCTAGCGGTAACACTTCAGGAAGAAGAGAAGGGCATTCTGAGGCCTTGGCATCTTCCTTCAATGCCGGGGCCAGCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp TCAAGCAAGGTCTGCTTCTCTGCCATGGCCTGTTCATACTCTGCCTaGACCACATCAAGCTCTGCTTGCTTGGCATCCAGCTCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSKVCFSAMACSYSA*TTSSSACLASSSAW
Trigger: CCAGGCTGAGCTGGATGCCAAGCAAGCAGAGCTTGATGTGGTGCAGGCAGAGTATGAACAGGCCATGGCAGAGAAGCAGACCTTGCTTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp TCACCTGCCAAGCCACTGATGAGCGTGGATGCTGTCTGCATCTTATaGCTACACCGGTCCGCATCTTCAAGCAAGGTCTGCTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SPAKPLMSVDAVCIL*LHRSASSSKVCFSA
Trigger: GGCAGAGAAGCAGACCTTGCTTGAAGATGCGGACCGGTGTAGGCATAAGATGCAGACAGCATCCACGCTCATCAGTGGCTTGGCAGGTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp CGCTCCTTTTCACCTGCCAAGCCACTGATGAGCGTGGATGCTGTCTaGATCTTATGCCTACACCGGTCCGCATCTTCAAGCAAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: RSFSPAKPLMSVDAV*ILCLHRSASSSKVC
Trigger: GCAGACCTTGCTTGAAGATGCGGACCGGTGTAGGCATAAGATGCAGACAGCATCCACGCTCATCAGTGGCTTGGCAGGTGAAAAGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp AGGCCCCCATCTGCCGTGTCTAACGTGTTAAAGCTCACCTCCCGGTaGATGTTCTCAGGCGTAATGGCTTTGGATGGGTCAGACCTGATG +
Preference number: 5 (lower is better)
Translates to: RPPSAVSNVLKLTSR*MFSGVMALDGSDLM
Trigger: CATCAGGTCTGACCCATCCAAAGCCATTACGCCTGAGAACATCCACCGGGAGGTGAGCTTTAACACGTTAGACACGGCAGATGGGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CACATATTCTGGGGTACACAGGCTCCAATGCCTCCAAGTACCGTTTaGCGCGACATAGTAGTCGAACATGGTGTCCCCAGCGTCCGTCAG +
Preference number: 5 (lower is better)
Translates to: HIFWGTQAPMPPSTV*RDIVVEHGVPSVRQ
Trigger: CTGACGGACGCTGGGGACACCATGTTCGACTACTATGTCGCGCCAAACGGTACTTGGAGGCATTGGAGCCTGTGTACCCCAGAATATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp GAGAAAAGCAGAGCACAATGTGCAGGTTTCCTCGGACCCTGCTCATaGAATACTCGTACAGGTTGTCATTGGTGGGCGGGCGCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: EKSRAQCAGFLGPCS*NTRTGCHWWAGAWD
Trigger: ATCCCAGGCGCCCGCCCACCAATGACAACCTGTACGAGTATTTCATGAGCAGGGTCCGAGGAAACCTGCACATTGTGCTCTGCTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp CAGGGCAGGAGTCATAGCGATGTTGGGAATGGCCAGAGTGACACTTaGCCGGAAAATGGGCAGATGGTTCTGCTTTGCCTTAGACGCATC +
Preference number: 5 (lower is better)
Translates to: QGRSHSDVGNGQSDT*PENGQMVLLCLRRI
Trigger: GATGCGTCTAAGGCAAAGCAGAACCATCTGCCCATTTTCCGGGCAAGTGTCACTCTGGCCATTCCCAACATCGCTATGACTCCTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp CGTCCATCGCTCCTTTTCACCTGCCAAGCCACTGATGAGCGTGGATaGTGTCTGCATCTTATGCCTACACCGGTCCGCATCTTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: RPSLLFTCQATDERG*CLHLMPTPVRIFKQ
Trigger: TTGCTTGAAGATGCGGACCGGTGTAGGCATAAGATGCAGACAGCATCCACGCTCATCAGTGGCTTGGCAGGTGAAAAGGAGCGATGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CCAAGAGGACCTTGGCTATCCTGTTATAGCTGCGGATCACAGGTTTaGCCTCCGCAGTCCTCAGCACAAAGGGATGCTGCTGGAAGAGTT +
Preference number: 5 (lower is better)
Translates to: PRGPWLSCYSCGSQV*PPQSSAQRDAAGRV
Trigger: AACTCTTCCAGCAGCATCCCTTTGTGCTGAGGACTGCGGAGGCCAAACCTGTGATCCGCAGCTATAACAGGATAGCCAAGGTCCTCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp GGAGAGGTCTCGAAGGTTGAACACATAGTGGAATTTCGCAGGCGTTaGGAGCATCTTCAGTTTGGTCATCTGCCACAGACGGCGCGTCAG +
Preference number: 5 (lower is better)
Translates to: GEVSKVEHIVEFRRR*EHLQFGHLPQTARQ
Trigger: CTGACGCGCCGTCTGTGGCAGATGACCAAACTGAAGATGCTCCCAACGCCTGCGAAATTCCACTATGTGTTCAACCTTCGAGACCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTGGGACTGGCTCTTTTaGCTGCTCCCAGGGTGCGCA +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPWDWLF*LLPGCA
Trigger: TGCGCACCCTGGGAGCAGCAAAAAGAGCCAGTCCCA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp TCTTTCTTGCAGTTGCTGTCAATGGCAGAGAGCTGGCCCCGGCATTaGAGGAAGATGCCAAGGCCTCAGAATGCCCTTCTCTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SFLQLLSMAESWPRH*RKMPRPQNALLFFL
Trigger: CAGGAAGAAGAGAAGGGCATTCTGAGGCCTTGGCATCTTCCTTCAATGCCGGGGCCAGCTCTCTGCCATTGACAGCAACTGCAAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp TGTTTTCCATCTCAGCCCTGTACTTCCTGTTGCAGTGACGGCCTATaGCCGCCATCCAGGCTTTCGTCTCTGCGGTCAGTGAAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: CFPSQPCTSCCSDGL*PPSRLSSLRSVKAS
Trigger: TGAAGCTTTCACTGACCGCAGAGACGAAAGCCTGGATGGCGGTCATAGGCCGTCACTGCAACAGGAAGTACAGGGCTGAGATGGAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp ACTGTGAGAATGTTTTCCATCTCAGCCCTGTACTTCCTGTTGCAGTaGCGGCCTATGACCGCCATCCAGGCTTTCGTCTCTGCGGTCAGT +
Preference number: 5 (lower is better)
Translates to: TVRMFSISALYFLLQ*RPMTAIQAFVSAVS
Trigger: ACTGACCGCAGAGACGAAAGCCTGGATGGCGGTCATAGGCCGTCACTGCAACAGGAAGTACAGGGCTGAGATGGAAAACATTCTCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp ATGCTTCCACAGCCTGAGGAGTTCGTCTGTGTCTTTGATGACCTCTaGAGTGATGTTCAGCATGCCCTGCCAGATCCTGGAGAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: MLPQPEEFVCVFDDL*SDVQHALPDPGEVS
Trigger: CGAGACCTCTCCAGGATCTGGCAGGGCATGCTGAACATCACTTCAGAGGTCATCAAAGACACAGACGAACTCCTCAGGCTGTGGAAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp GAAGGTTCACCTTCTCCTTCAGACTGTTCTGTGCACCTGACAAGATaGCCACAAAGCCTTCCAGAGAGCTCAGGAACTCCTGCCGAATGC +
Preference number: 5 (lower is better)
Translates to: EGSPSPSDCSVHLTR*PQSLPESSGTPAEC
Trigger: GCATTCGGCAGGAGTTCCTGAGCTCTCTGGAAGGCTTTGTGGGCATCTTGTCAGGTGCACAGAACAGTCTGAAGGAGAAGGTGAACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp AGAGGACCTCAAACTCCAAGAGGACCTTGGCTATCCTGTTATAGCTaGGGATCACAGGTTTGGCCTCCGCAGTCCTCAGCACAAAGGGAT +
Preference number: 5 (lower is better)
Translates to: RGPQTPRGPWLSCYS*GSQVWPPQSSAQRD
Trigger: ATCCCTTTGTGCTGAGGACTGCGGAGGCCAAACCTGTGATCCGCAGCTATAACAGGATAGCCAAGGTCCTCTTGGAGTTTGAGGTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp CTTCACAAGTCAGGGGGTCATCCTGAGGGAGCTGACAAAGAGCCATaGTACTCATTTCCTCCAGGATGGCGTGGATGCGGAACTCAATCA +
Preference number: 5 (lower is better)
Translates to: LHKSGGHPEGADKEP*YSFPPGWRGCGTQS
Trigger: TGATTGAGTTCCGCATCCACGCCATCCTGGAGGAAATGAGTAGCATGGCTCTTTGTCAGCTCCCTCAGGATGACCCCCTGACTTGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp CCCTTGGGGACACTGATGATGCATTCCACGGCTTTGTTCAGCGTCTaGTGTATGTCTTCCAGGGCAGGAGTCATAGCGATGTTGGGAATG +
Preference number: 5 (lower is better)
Translates to: PLGTLMMHSTALFSV*CMSSRAGVIAMLGM
Trigger: CATTCCCAACATCGCTATGACTCCTGCCCTGGAAGACATACAGCAGACGCTGAACAAAGCCGTGGAATGCATCATCAGTGTCCCCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp GAGCTGCAGGAACACACTCAGACGCTCTCGCAGGTGGTTAAGGGATaGGATTGGCTCATAAAGCTTTGGCATTTCAGCATCAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: ELQEHTQTLSQVVKG*DWLIKLWHFSISLL
Trigger: GAGGAGGCTGATGCTGAAATGCCAAAGCTTTATGAGCCAATCGCATCCCTTAACCACCTGCGAGAGCGTCTGAGTGTGTTCCTGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp ATCTTCAAGCAAGGTCTGCTTCTCTGCCATGGCCTGTTCATACTCTaGCTGCACCACATCAAGCTCTGCTTGCTTGGCATCCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: IFKQGLLLCHGLFIL*LHHIKLCLLGIQLS
Trigger: GCTGAGCTGGATGCCAAGCAAGCAGAGCTTGATGTGGTGCAGGCAGAGTATGAACAGGCCATGGCAGAGAAGCAGACCTTGCTTGAAGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp AGTTTCAGCTCAGTCAGGGTGCTACGGACAAGGCTGAGTACCCTCTaGATCCTGTCAATCTCCTGCCTGAGGAAAATGTTCATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: SFSSVRVLRTRLSTL*ILSISCLRKMFMGW
Trigger: CCAGCCCATGAACATTTTCCTCAGGCAGGAGATTGACAGGATGCAGAGGGTACTCAGCCTTGTCCGTAGCACCCTGACTGAGCTGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp GATAGATCCATATTCTGGGGTGGTGTCAGGTGGGTACACATATTCTaGGGTACACAGGCTCCAATGCCTCCAAGTACCGTTTGGCGCGAC +
Preference number: 5 (lower is better)
Translates to: DRSIFWGGVRWVHIF*GTQAPMPPSTVWRD
Trigger: GTCGCGCCAAACGGTACTTGGAGGCATTGGAGCCTGTGTACCCCAGAATATGTGTACCCACCTGACACCACCCCAGAATATGGATCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp AAACGTTGTCTAGAGCAGGGTCTAATTCCTCTCCAACATCCTCGATaGGCAAAGGCCTCCCCAGTGAAAGGCTGTCCTCCAGGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: KRCLEQGLIPLQHPR*AKASPVKGCPPGGF
Trigger: GAAACCACCTGGAGGACAGCCTTTCACTGGGGAGGCCTTTGCTCATCGAGGATGTTGGAGAGGAATTAGACCCTGCTCTAGACAACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TGTCTCTTCAAGCGCTGTGGTATGTCATTGCGTCCACCCCCAGGATaGATCATGGCTGCCAAGAACTGGATGTCCACAATGCTAGTGAAC +
Preference number: 5 (lower is better)
Translates to: CLFKRCGMSLRPPPG*IMAAKNWMSTMLVN
Trigger: GTTCACTAGCATTGTGGACATCCAGTTCTTGGCAGCCATGATCCATCCTGGGGGTGGACGCAATGACATACCACAGCGCTTGAAGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CAGGAACACACTCAGACGCTCTCGCAGGTGGTTAAGGGATGCGATTaGCTCATAAAGCTTTGGCATTTCAGCATCAGCCTCCTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: QEHTQTLSQVVKGCD*LIKLWHFSISLLRC
Trigger: ACACCTGAGGAGGCTGATGCTGAAATGCCAAAGCTTTATGAGCCAATCGCATCCCTTAACCACCTGCGAGAGCGTCTGAGTGTGTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCATGCTGCTGGAAGAGTaGCATTGGCTGCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPMLLEE*HWLLQP
Trigger: AGGCTGGAGCAGCCAATGCAACTCTTCCAGCAGCAT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp ATCTTCCACTTCTGGTTTGTTCAGGTCCAAACAGGAAGCTACAATTaGAAACAGATAGTCATGCCGCCCATCCAGACGGGCCCTCTTGGC +
Preference number: 5 (lower is better)
Translates to: IFHFWFVQVQTGSYN*KQIVMPPIQTGPLG
Trigger: GCCAAGAGGGCCCGTCTGGATGGGCGGCATGACTATCTGTTTGCAATTGTAGCTTCCTGTTTGGACCTGAACAAACCAGAAGTGGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp GGCCAGAGTGACACTTGCCCGGAAAATGGGCAGATGGTTCTGCTTTaGCTTAGACGCATCATTACTGTCCCGGAAGTTAATCATGTGGGA +
Preference number: 5 (lower is better)
Translates to: GQSDTCPENGQMVLL*LRRIITVPEVNHVG
Trigger: TCCCACATGATTAACTTCCGGGACAGTAATGATGCGTCTAAGGCAAAGCAGAACCATCTGCCCATTTTCCGGGCAAGTGTCACTCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp AAAGCTCACCTCCCGGTGGATGTTCTCAGGCGTAATGGCTTTGGATaGGTCAGACCTGATGAAGAACACACATGCTCCCATAAGAGCAAC +
Preference number: 5 (lower is better)
Translates to: KAHLPVDVLRRNGFG*VRPDEEHTCSHKSN
Trigger: GTTGCTCTTATGGGAGCATGTGTGTTCTTCATCAGGTCTGACCCATCCAAAGCCATTACGCCTGAGAACATCCACCGGGAGGTGAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CCAGTGTCGTTCCACCATGGCGTTACTGGCCATGTACTCCAGCAATaGACAGCACTCACTGAAGTCATCAATGGTCTTCTTCAGATCCAG +
Preference number: 5 (lower is better)
Translates to: PVSFHHGVTGHVLQQ*TALTEVINGLLQIQ
Trigger: CTGGATCTGAAGAAGACCATTGATGACTTCAGTGAGTGCTGTCCATTGCTGGAGTACATGGCCAGTAACGCCATGGTGGAACGACACTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TTCTTCTCCAAGTATCCTGTGAGCGACTTCTGGCAGATTTCCAACTaGTCCAGTAAGTGTGGCAGTAGCTGCCCCATGGTCTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: FFSKYPVSDFWQISN*SSKCGSSCPMVSSP
Trigger: TGGAGATGAGACCATGGGGCAGCTACTGCCACACTTACTGGACCAGTTGGAAATCTGCCAGAAGTCGCTCACAGGATACTTGGAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp GGAAAACACAGCCTTTTCTTCTCCAAGTATCCTGTGAGCGACTTCTaGCAGATTTCCAACTGGTCCAGTAAGTGTGGCAGTAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: GKHSLFFSKYPVSDF*QISNWSSKCGSSCP
Trigger: GGGGCAGCTACTGCCACACTTACTGGACCAGTTGGAAATCTGCCAGAAGTCGCTCACAGGATACTTGGAGAAGAAAAGGCTGTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CCCAGGGTCATCATGCCGTGCCTCACCCTCTGCGTTTCAAACAACTaGATGACTTTCAGTTTCCAAGGAGGGTGGTTAATTAAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: PRVIMPCLTLCVSNN*MTFSFQGGWLIKPA
Trigger: AGCTGGCTTAATTAACCACCCTCCTTGGAAACTGAAAGTCATCCAGTTGTTTGAAACGCAGAGGGTGAGGCACGGCATGATGACCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp GTGATCACAAAGGCTTCCAGTACCTCCATCTTGAACTCCAGGTTCTaGATGCTGAACCGATACAGGTCCGGGAAAGTCTCTGCATACAGC +
Preference number: 5 (lower is better)
Translates to: VITKASSTSILNSRF*MLNRYRSGKVSAYS
Trigger: GCTGTATGCAGAGACTTTCCCGGACCTGTATCGGTTCAGCATCCAGAACCTGGAGTTCAAGATGGAGGTACTGGAAGCCTTTGTGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp GGTCCGCACATTGTCCACATTTGGCACAAGGATAGATCCATATTCTaGGGTGGTGTCAGGTGGGTACACATATTCTGGGGTACACAGGCT +
Preference number: 5 (lower is better)
Translates to: GPHIVHIWHKDRSIF*GGVRWVHIFWGTQA
Trigger: AGCCTGTGTACCCCAGAATATGTGTACCCACCTGACACCACCCCAGAATATGGATCTATCCTTGTGCCAAATGTGGACAATGTGCGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp AGGCAAGGTACAGTTGAATATGGAGAACTGTCTCTTCAAGCGCTGTaGTATGTCATTGCGTCCACCCCCAGGATGGATCATGGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: RQGTVEYGELSLQAL*YVIASTPRMDHGCQ
Trigger: TTGGCAGCCATGATCCATCCTGGGGGTGGACGCAATGACATACCACAGCGCTTGAAGAGACAGTTCTCCATATTCAACTGTACCTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp ACGCTCTCGCAGGTGGTTAAGGGATGCGATTGGCTCATAAAGCTTTaGCATTTCAGCATCAGCCTCCTCAGGTGTTTCACCTGTAGCTTC +
Preference number: 5 (lower is better)
Translates to: TLSQVVKGCDWLIKL*HFSISLLRCFTCSF
Trigger: GAAGCTACAGGTGAAACACCTGAGGAGGCTGATGCTGAAATGCCAAAGCTTTATGAGCCAATCGCATCCCTTAACCACCTGCGAGAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGAGCTGGCCCCGGCATaGAAGGAAGATGCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAAELAPA*KEDAKA
Trigger: GGCCTTGGCATCTTCCTTCAATGCCGGGGCCAGCTC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCACTGTCTAACCCCCTaGGGGACACTGATGATGCAT +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPHCLTP*GTLMMH
Trigger: ATGCATCATCAGTGTCCCCAAGGGGGTTAGACAGTG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCAAACTGCTGGCAGTCTaGGAGGAACACCTCCACTGT +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPKLLAV*EEHLHC
Trigger: ACAGTGGAGGTGTTCCTCCAAGACTGCCAGCAGTTT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTCTTGCACTATCAAGTaGGCCTTCAGAGGGAGCACC +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSCTIK*AFRGST
Trigger: GGTGCTCCCTCTGAAGGCCAACTTGATAGTGCAAGA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp CCATGGCGTTACTGGCCATGTACTCCAGCAATGGACAGCACTCACTaGAGTCATCAATGGTCTTCTTCAGATCCAGAAAGGCCTGCCAAT +
Preference number: 5 (lower is better)
Translates to: PWRYWPCTPAMDSTH*SHQWSSSDPERPAN
Trigger: ATTGGCAGGCCTTTCTGGATCTGAAGAAGACCATTGATGACTTCAGTGAGTGCTGTCCATTGCTGGAGTACATGGCCAGTAACGCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp TCCGGGAAAGTCTCTGCATACAGCTGTCGAAGGATTTCAGCCTCTTaGGGAGACCGTCTCTTGAGAAAACCCTCAAGAATAGGACTCCAG +
Preference number: 5 (lower is better)
Translates to: SGKVSAYSCRRISAS*GDRLLRKPSRIGLQ
Trigger: CTGGAGTCCTATTCTTGAGGGTTTTCTCAAGAGACGGTCTCCTCAAGAGGCTGAAATCCTTCGACAGCTGTATGCAGAGACTTTCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp AGGCGTAATGGCTTTGGATGGGTCAGACCTGATGAAGAACACACATaGTCCCATAAGAGCAACGTCTTTCCCTTCGGTCACGAACACCTT +
Preference number: 5 (lower is better)
Translates to: RRNGFGWVRPDEEHT*SHKSNVFPFGHEHL
Trigger: AAGGTGTTCGTGACCGAAGGGAAAGACGTTGCTCTTATGGGAGCATGTGTGTTCTTCATCAGGTCTGACCCATCCAAAGCCATTACGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp GGAATGGCCAGAGTGACACTTGCCCGGAAAATGGGCAGATGGTTCTaGTTTGCCTTAGACGCATCATTACTGTCCCGGAAGTTAATCATG +
Preference number: 5 (lower is better)
Translates to: GMARVTLARKMGRWF*FALDASLLSRKLIM
Trigger: CATGATTAACTTCCGGGACAGTAATGATGCGTCTAAGGCAAAGCAGAACCATCTGCCCATTTTCCGGGCAAGTGTCACTCTGGCCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp TGGCGGGAGAAGCATTGTCAATGTTATGAGGTTCAAAAACAATCTTaGAGTTTGGAGCCATGGGGATCCGGTCGCCATTGGCCAGAGTCA +
Preference number: 5 (lower is better)
Translates to: WREKHCQCYEVQKQS*SLEPWGSGRHWPES
Trigger: TGACTCTGGCCAATGGCGACCGGATCCCCATGGCTCCAAACTGCAAGATTGTTTTTGAACCTCATAACATTGACAATGCTTCTCCCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp TCGCTGGACATGCTAAAGCGGTCAGCTATCACACGTTTACACTCATaGTTCCACAGCCTGAGGAGTTCGTCTGTGTCTTTGATGACCTCT +
Preference number: 5 (lower is better)
Translates to: SLDMLKRSAITRLHS*FHSLRSSSVSLMTS
Trigger: AGAGGTCATCAAAGACACAGACGAACTCCTCAGGCTGTGGAAGCATGAGTGTAAACGTGTGATAGCTGACCGCTTTAGCATGTCCAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CACATTTGGCACAAGGATAGATCCATATTCTGGGGTGGTGTCAGGTaGGTACACATATTCTGGGGTACACAGGCTCCAATGCCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: HIWHKDRSIFWGGVR*VHIFWGTQAPMPPS
Trigger: ACTTGGAGGCATTGGAGCCTGTGTACCCCAGAATATGTGTACCCACCTGACACCACCCCAGAATATGGATCTATCCTTGTGCCAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CTTTGGTCCAGGAACAAAGTCCGGCTACATTCCCACAGACGCGCTTaGCCGTCTCGATGTTGTAGTCGGACATTTCAAAGTAAGGATTCA +
Preference number: 5 (lower is better)
Translates to: LWSRNKVRLHSHRRA*PSRCCSRTFQSKDS
Trigger: TGAATCCTTACTTTGAAATGTCCGACTACAACATCGAGACGGCCAAGCGCGTCTGTGGGAATGTAGCCGGACTTTGTTCCTGGACCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TCTGTAACTACGTCCATTAGCTCATCCAGGAAGTCAAGTCCCAGGTaGCAGTTCTGTAGAAGTACCCATCCTCCATTTGCCATGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SVTTSISSSRKSSPR*QFCRSTHPPFAMVW
Trigger: CCAGACCATGGCAAATGGAGGATGGGTACTTCTACAGAACTGCCACCTGGGACTTGACTTCCTGGATGAGCTAATGGACGTAGTTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TGTCTTGAGGTCCACAGCAGCAATGTAGTTCAAGTCTGTTCGAACTaGCTTCTTGTAGATGGGGCAGCAGTACAACCGAGGATCTCTTGC +
Preference number: 5 (lower is better)
Translates to: CLEVHSSNVVQVCSN*LLVDGAAVQPRISC
Trigger: GCAAGAGATCCTCGGTTGTACTGCTGCCCCATCTACAAGAAGCCAGTTCGAACAGACTTGAACTACATTGCTGCTGTGGACCTCAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTCGGTCACGAACACCTaGGGCTTTTTCATCTTTCCG +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSVTNT*GFFIFP
Trigger: CGGAAAGATGAAAAAGCCCAAGGTGTTCGTGACCGA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACCCAGAGGACCGAACTaGCGCCGCTCCTGGACAGTG +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLPRGPN*RRSWTV
Trigger: CACTGTCCAGGAGCGGCGCAAGTTCGGTCCTCTGGG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp ACATTTTTGAAGGTTCACCTTCTCCTTCAGACTGTTCTGTGCACCTaGCAAGATGCCCACAAAGCCTTCCAGAGAGCTCAGGAACTCCTG +
Preference number: 5 (lower is better)
Translates to: TFLKVHLLLQTVLCT*QDAHKAFQRAQELL
Trigger: CAGGAGTTCCTGAGCTCTCTGGAAGGCTTTGTGGGCATCTTGTCAGGTGCACAGAACAGTCTGAAGGAGAAGGTGAACCTTCAAAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp GCATTTCCCCGAGGAGTGCGTATGACTCGAGAGATCTTGACTAAGTaGACCATTGCATCTATGAAGAACACCATGTCCATGCCAGTGCCA +
Preference number: 5 (lower is better)
Translates to: AFPRGVRMTREILTK*TIASMKNTMSMPVP
Trigger: TGGCACTGGCATGGACATGGTGTTCTTCATAGATGCAATGGTTCACTTAGTCAAGATCTCTCGAGTCATACGCACTCCTCGGGGAAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp CTACCCCATCCTGAAAAGAGCCCATGCACTGGACCAATTCCTTCTTaGTCTCCGCTGTGCAGTCAATGGTATAGGATGAGAGGAAGTGTT +
Preference number: 5 (lower is better)
Translates to: LPHPEKSPCTGPIPS*SPLCSQWYRMRGSV
Trigger: AACACTTCCTCTCATCCTATACCATTGACTGCACAGCGGAGATCAAGAAGGAATTGGTCCAGTGCATGGGCTCTTTTCAGGATGGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp ATGATATTTCGTAACTTAAAGGTCTCATTGCCCACATCCAGACTGTaGCCAGTGAGAGCAGTGATCCTCTGCCAGTGTCGTTCCACCATG +
Preference number: 5 (lower is better)
Translates to: MIFRNLKVSLPTSRL*PVRAVILCQCRSTM
Trigger: CATGGTGGAACGACACTGGCAGAGGATCACTGCTCTCACTGGGCACAGTCTGGATGTGGGCAATGAGACCTTTAAGTTACGAAATATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp ATTGTGACTTCCTTTAAAACCGTGTCTGCTTTCTCATTGGCCACCTaGAGCTCCTTCTCTTTTCCTGCCAGTTCTTTGCTCAAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: IVTSFKTVSAFSLAT*SSFSFPASSLLKAA
Trigger: GGCAGCCTTGAGCAAAGAACTGGCAGGAAAAGAGAAGGAGCTGCAGGTGGCCAATGAGAAAGCAGACACGGTTTTAAAGGAAGTCACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp TTGCTGCCTCTAATTTCTCTTCTGCGATGGCTTTGTCCTTGGAGATaGTGTCGACAATGGCCTGTGCTTTGTCCTTTACCTTCTGCACCT +
Preference number: 5 (lower is better)
Translates to: LLPLISLLRWLCPWR*CRQWPVLCPLPSAP
Trigger: AGGTGCAGAAGGTAAAGGACAAAGCACAGGCCATTGTCGACAGCATCTCCAAGGACAAAGCCATCGCAGAAGAGAAATTAGAGGCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp GTCAGATTCCTCCCATGTCTTTTCCAAGTCCAGGATAACTCCCTCTaGATAGTTTTCTCCCATGGAGTCCATGATGTACTTGCGAGCCTG +
Preference number: 5 (lower is better)
Translates to: VRFLPCLFQVQDNSL*IVFSHGVHDVLASL
Trigger: CAGGCTCGCAAGTACATCATGGACTCCATGGGAGAAAACTATGCAGAGGGAGTTATCCTGGACTTGGAAAAGACATGGGAGGAATCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TTCCTGGTCACTTTCAAAAGAGCATCTGTGTTCTGGTGGTTAAAGTaGGAGAGCAGCTCACGGGCTTCCTCTAACACCTCGGTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: FLVTFKRASVFWWLK*ESSSRASSNTSVSF
Trigger: GAAAGAAACCGAGGTGTTAGAGGAAGCCCGTGAGCTGCTCTCCCACTTTAACCACCAGAACACAGATGCTCTTTTGAAAGTGACCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGCACTGCACCCATTTTaGAATCTGGGCTTTGAATGG +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPALHPF*NLGFEW
Trigger: CCATTCAAAGCCCAGATTCAAAAATGGGTGCAGTGC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTCCTTGGGCAGCTGCTaGGCAATGTCTCCTCCCACG +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSLGSC*AMSPPT
Trigger: CGTGGGAGGAGACATTGCCAAGCAGCTGCCCAAGGA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTCTGCCATCACAGGCTaGTCCAATTCAATTGTCTCG +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPSAITG*SNSIVS
Trigger: CGAGACAATTGAATTGGACAAGCCTGTGATGGCAGA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCCCACGTAGCTCTCTATaGTCCTCTGAAACATCACTG +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPPRSSL*SSETSL
Trigger: CAGTGATGTTTCAGAGGACAATAGAGAGCTACGTGG...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp CACAGTGCCCTGCTTCTGCTCCCTCCACATCCTGATAGTAAAACATaGGATGACGGAGTCCACCAACAGCAAAAAGCTGATCCATTCTTT +
Preference number: 5 (lower is better)
Translates to: HSALLLLPPHPDSKT*DDGVHQQQKADPFF
Trigger: AAAGAATGGATCAGCTTTTTGCTGTTGGTGGACTCCGTCATCTCATGTTTTACTATCAGGATGTGGAGGGAGCAGAAGCAGGGCACTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp AGGTTCTGGAGAAAGTTTCCTGCTGTCATCAATTTCAAAGACTCCTaGCAGGAAGGCATGGTGCAGCCTTTGTCCACGTCAATTTTCACC +
Preference number: 5 (lower is better)
Translates to: RFWRKFPAVINFKDS*QEGMVQPLSTSIFT
Trigger: GGTGAAAATTGACGTGGACAAAGGCTGCACCATGCCTTCCTGGCAGGAGTCTTTGAAATTGATGACAGCAGGAAACTTTCTCCAGAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp ATCCTAATATCATCCAGGTCCTTGATCGGCCGGCTCAGTTTCTTCTaGGATTCTTCGACAACTGTGAGAATGTTTTCCATCTCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: ILISSRSLIGRLSFF*DSSTTVRMFSISAL
Trigger: CAGGGCTGAGATGGAAAACATTCTCACAGTTGTCGAAGAATCCCAGAAGAAACTGAGCCGGCCGATCAAGGACCTGGATGATATTAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TGTGCCAGTCCTTTGAATATCCGCCCAAGTCCTCGGAAATCCATCTaGTCCGAGCAGTTGAAAACTACAACATATTTCCCAAGACATCGG +
Preference number: 5 (lower is better)
Translates to: CASPLNIRPSPRKSI*SEQLKTTTYFPRHR
Trigger: CCGATGTCTTGGGAAATATGTTGTAGTTTTCAACTGCTCGGACCAGATGGATTTCCGAGGACTTGGGCGGATATTCAAAGGACTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp ACAATAATTCCATTCTGGATGGACAGGTCATCATTTGGAAGGCCTTaGAGGTTCCATTCGCTGATAGTAGGGGCATCGATCAGCATCTCG +
Preference number: 5 (lower is better)
Translates to: TIIPFWMDRSSFGRP*RFHSLIVGASISIS
Trigger: CGAGATGCTGATCGATGCCCCTACTATCAGCGAATGGAACCTCCAAGGCCTTCCAAATGATGACCTGTCCATCCAGAATGGAATTATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CTCTGCATCCTGTCAATCTCCTGCCTGAGGAAAATGTTCATGGGCTaGAATGGTCCCATCTTCTGCAATCTCTCCTTCACTTCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: LCILSISCLRKMFMG*NGPIFCNLSFTSKG
Trigger: TCCTTTTGAAGTGAAGGAGAGATTGCAGAAGATGGGACCATTCCAGCCCATGAACATTTTCCTCAGGCAGGAGATTGACAGGATGCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAAGCGCTTGGCTTCCTaGGGCAGCTGCTTGGCAATG +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFKRLAS*GSCLAM
Trigger: CATTGCCAAGCAGCTGCCCAAGGAAGCCAAGCGCTT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATTGGTGGTCTCTGTCTaGCCTGTCCCTGCGGGACCA +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKILVVSV*PVPAGP
Trigger: TGGTCCCGCAGGGACAGGCAAGACAGAGACCACCAA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCGGTAGATCGATACGGTaGAATTCATCAAAGCAACCC +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPGRSIR*NSSKQP
Trigger: GGGTTGCTTTGATGAATTCAACCGTATCGATCTACC...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCTTGGCTCATAAAGCTTaGGCATTTCAGCATCAGCCT +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPLAHKA*AFQHQP
Trigger: AGGCTGATGCTGAAATGCCAAAGCTTTATGAGCCAA...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp TTAGACGCATCATTACTGTCCCGGAAGTTAATCATGTGGGAGAAGTaGATGCGTCTGCGAATGGCCTCAAGTGTATTCCTGGTCACTTTC +
Preference number: 5 (lower is better)
Translates to: LDASLLSRKLIMWEK*MRLRMASSVFLVTF
Trigger: GAAAGTGACCAGGAATACACTTGAGGCCATTCGCAGACGCATTCACTTCTCCCACATGATTAACTTCCGGGACAGTAATGATGCGTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CACGGTGACAGTGAAGTCGATGATGGAGGTCCGAGCACTTATTTCTaGGGTATAGGCTGGATTCGGCAGTTTGGTAGTGATATAAAGTTT +
Preference number: 5 (lower is better)
Translates to: HGDSEVDDGGPSTYF*GIGWIRQFGSDIKF
Trigger: AAACTTTATATCACTACCAAACTGCCGAATCCAGCCTATACCCCAGAAATAAGTGCTCGGACCTCCATCATCGACTTCACTGTCACCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CAGAAGGAGGCGTCTGAAGCAGTCGAGAGATTTATCGTAGGCATTTaGAAGCGGCTCCTCTTCTGGGTTTTCTTTATCAAACCAAACTCT +
Preference number: 5 (lower is better)
Translates to: QKEASEAVERFIVGI*KRLLFWVFFIKPNS
Trigger: AGAGTTTGGTTTGATAAAGAAAACCCAGAAGAGGAGCCGCTTCCAAATGCCTACGATAAATCTCTCGACTGCTTCAGACGCCTCCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CAGCAGCAATGTAGTTCAAGTCTGTTCGAACTGGCTTCTTGTAGATaGGGCAGCAGTACAACCGAGGATCTCTTGCAGTATTGTTTTCTG +
Preference number: 5 (lower is better)
Translates to: QQQCSSSLFELASCR*GSSTTEDLLQYCFL
Trigger: CAGAAAACAATACTGCAAGAGATCCTCGGTTGTACTGCTGCCCCATCTACAAGAAGCCAGTTCGAACAGACTTGAACTACATTGCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCAACAGGAAGCTACAATaGCAAACAGATAGTCATGCC +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPNRKLQ*QTDSHA
Trigger: GGCATGACTATCTGTTTGCAATTGTAGCTTCCTGTT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACATCGGCCCATGTCCTaGGTGGTCTCTGTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIHRPMS*VVSVLP
Trigger: AGGCAAGACAGAGACCACCAAGGACATGGGCCGATG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGGCATGGTGCAGCCTTaGTCCACGTCAATTTTCACC +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAAGMVQP*STSIFT
Trigger: GGTGAAAATTGACGTGGACAAAGGCTGCACCATGCC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp AGTCGCCATGTCTTCCAACCCCTCTATTTTGGAATCTTGCAGGACTaGGTATGTCTTGAAGGTAGTGAAGATGTCCATTATCTTGGCCAG +
Preference number: 5 (lower is better)
Translates to: SRHVFQPLYFGILQD*VCLEGSEDVHYLGQ
Trigger: CTGGCCAAGATAATGGACATCTTCACTACCTTCAAGACATACTCAGTCCTGCAAGATTCCAAAATAGAGGGGTTGGAAGACATGGCGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp CACAGGCTTGTCCAATTCAATTGTCTCGCCCTCCCGAGAGGAGATTaGCAGAATCCGATCATAGATCTTGTCATGGAACTTGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: HRLVQFNCLALPRGD*QNPIIDLVMELDSF
Trigger: AAAACTGTCAAGTTCCATGACAAGATCTATGATCGGATTCTGTCAATCTCCTCTCGGGAGGGCGAGACAATTGAATTGGACAAGCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp TCATTGACTGCTTCCTCCACAAGGGAGCTTTTAAAATGGAGTAGCTaGGCACCACTCACACAGAGATCCTTTGTCATTTGGAGGAATTCT +
Preference number: 5 (lower is better)
Translates to: SLTASSTRELLKWSS*APLTQRSFVIWRNS
Trigger: AGAATTCCTCCAAATGACAAAGGATCTCTGTGTGAGTGGTGCGCAGCTACTCCATTTTAAAAGCTCCCTTGTGGAGGAAGCAGTCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp AGCGGTGTTATGACAAGTCTGTCAGTGCAGCCTAAAAACTCATTCTaGTATATGAAAGCCACGTCGGTGATGTGGATCATCGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SGVMTSLSVQPKNSF*YMKATSVMWIIVLS
Trigger: TGACAAGACGATGATCCACATCACCGACGTGGCTTTCATATACCAGAATGAGTTTTTAGGCTGCACTGACAGACTTGTCATAACACCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp GTTTATCCACGTAGCTCTCTATTGTCCTCTGAAACATCACTGGGGTaGTCGCCGAAGAAAAGTTCAGATTCTTCACCATGTGACTTTCAG +
Preference number: 5 (lower is better)
Translates to: VYPRSSLLSSETSLG*SPKKSSDSSPCDFQ
Trigger: CTGAAAGTCACATGGTGAAGAATCTGAACTTTTCTTCGGCGACCACCCCAGTGATGTTTCAGAGGACAATAGAGAGCTACGTGGATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CATCCTGTCAATCTCCTGCCTGAGGAAAATGTTCATGGGCTGGAATaGTCCCATCTTCTGCAATCTCTCCTTCACTTCAAAAGGACTATA +
Preference number: 5 (lower is better)
Translates to: HPVNLLPEENVHGLE*SHLLQSLLHFKRTI
Trigger: TATAGTCCTTTTGAAGTGAAGGAGAGATTGCAGAAGATGGGACCATTCCAGCCCATGAACATTTTCCTCAGGCAGGAGATTGACAGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATCCAGACGGGCCCTCTaGGCTTCCTTCTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGSRRAL*ASFSSF
Trigger: GAAAGAAGAGAAGGAAGCCAAGAGGGCCCGTCTGGA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTCAGGCGTAATGGCTTaGGATGGGTCAGACCTGATG +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSGVMA*DGSDLM
Trigger: CATCAGGTCTGACCCATCCAAAGCCATTACGCCTGA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACAAACCTTCAGAAGCTaGGACTTGGCCGCAGCAAGC +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIQTFRS*DLAAAS
Trigger: GCTTGCTGCGGCCAAGTCCAAGCTTCTGAAGGTTTG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTCATGCATCTTTCTCTaGGACAACAGCTCGCTGCTC +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAASCIFL*DNSSLL
Trigger: GAGCAGCGAGCTGTTGTCCAAGAGAAAGATGCATGA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCTCAATAGGTCCCACTaGGAAGTCGGTGGAGATCTG +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFLNRSH*EVGGDL
Trigger: CAGATCTCCACCGACTTCCAAGTGGGACCTATTGAG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGCTTGTCCAATTCAATaGTCTCGCCCTCCCGAGAGG +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIACPIQ*SRPPER
Trigger: CCTCTCGGGAGGGCGAGACAATTGAATTGGACAAGC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGCTCATGCCCAGAGCTaGAGCCAATGTGATATAGCA +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAAAHAQS*SQCDIA
Trigger: TGCTATATCACATTGGCTCAAGCTCTGGGCATGAGC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp GGTGCATGTCGGTACAGACCCCACACTTTTTGTAAGACATCAATCAGGATCCCCATCTGGTCCGAGCAGTaGAAAACTACAACATATTTC +
Preference number: 5 (lower is better)
Translates to: GACRYRPHTFCKTSIRIPIWSEQ*KTTTYF
Trigger: GAAATATGTTGTAGTTTTCAACTGCTCGGACCAGAT...GGGGATCCTGATTGATGTCTTACAAAAAGTGTGGGGTCTGTACCGACATGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGCCACAGAGCGGAAGTaGATCTTCAAGTTCTCCGGG +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIATERK*IFKFSG
Trigger: CCCGGAGAACTTGAAGATCAACTTCCGCTCTGTGGC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACATCAGTCCAGTCGTTaGTGGCCACATCGAGTCGAC +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGHQSSR*WPHRVD
Trigger: GTCGACTCGATGTGGCCACAAACGACTGGACTGATG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGGGAGCATCTTCAGTTaGGTCATCTGCCACAGACGG +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLGSIFS*VICHRR
Trigger: CCGTCTGTGGCAGATGACCAAACTGAAGATGCTCCC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAGTGATCCCTTTGCCTaGCTGGCCAGCAGTCCTGTA +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLSDPFA*LASSPV
Trigger: TACAGGACTGCTGGCCAGCAAGGCAAAGGGATCACT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTATAAAAGTGATCCCTTaGCCTTGCTGGCCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAAIKVIP*PCWPAV
Trigger: GACTGCTGGCCAGCAAGGCAAAGGGATCACTTTTAT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCAACTAAAGCATCCTaGGGCCATCGGCTGAACCAG +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLATKAS*GHRLNQ
Trigger: CTGGTTCAGCCGATGGCCCAAGGATGCTTTAGTTGC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTTTCCTGCCAGTTCTTaGCTCAAGGCTGCCACCGAT +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFFPASS*LKAATD
Trigger: ATCGGTGGCAGCCTTGAGCAAAGAACTGGCAGGAAA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp GTTAATGTTTTGTTGTCCCACTCATTGATCACTTGCCTCAGCTTTTaGTCAATGTCTCTCTCCTTCACGGCACTGATGCAAATGTCCTCA +
Preference number: 5 (lower is better)
Translates to: VNVLLSHSLITCLSF*SMSLSFTALMQMSS
Trigger: TGAGGACATTTGCATCAGTGCCGTGAAGGAGAGAGACATTGAGCAAAAGCTGAGGCAAGTGATCAATGAGTGGGACAACAAAACATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TTTATTAGCTCATTGACTGCTTCCTCCACAAGGGAGCTTTTAAAATaGAGTAGCTGCGCACCACTCACACAGAGATCCTTTGTCATTTGG +
Preference number: 5 (lower is better)
Translates to: FISSLTASSTRELLK*SSCAPLTQRSFVIW
Trigger: CCAAATGACAAAGGATCTCTGTGTGAGTGGTGCGCAGCTACTCCATTTTAAAAGCTCCCTTGTGGAGGAAGCAGTCAATGAGCTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CTCTGCGTTTCAAACAACTGGATGACTTTCAGTTTCCAAGGAGGGTaGTTAATTAAGCCAGCTTCCTCAACCTGTTTACTGATTGCTGTC +
Preference number: 5 (lower is better)
Translates to: LCVSNNWMTFSFQGG*LIKPASSTCLLIAV
Trigger: GACAGCAATCAGTAAACAGGTTGAGGAAGCTGGCTTAATTAACCACCCTCCTTGGAAACTGAAAGTCATCCAGTTGTTTGAAACGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TGTCAATGTTATGAGGTTCAAAAACAATCTTGCAGTTTGGAGCCATaGGGATCCGGTCGCCATTGGCCAGAGTCAGGGTTTTATTATCAT +
Preference number: 5 (lower is better)
Translates to: CQCYEVQKQSCSLEP*GSGRHWPESGFYYH
Trigger: ATGATAATAAAACCCTGACTCTGGCCAATGGCGACCGGATCCCCATGGCTCCAAACTGCAAGATTGTTTTTGAACCTCATAACATTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTATCTGCTCCATCTGTTaGATCCACACTCTCATGCAG +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAAICSIC*IHTLMQ
Trigger: CTGCATGAGAGTGTGGATCAAACAGATGGAGCAGAT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAAATCTGGAGAGCCTTaGTTTCCAGTGCTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFKSGEP*FPVLQL
Trigger: GAGCTGGAGCACTGGAAACAAAGGCTCTCCAGATTT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTCCAACCCCTCTATTTaGGAATCTTGCAGGACTGAG +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAASNPSI*ESCRTE
Trigger: CTCAGTCCTGCAAGATTCCAAAATAGAGGGGTTGGA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGGAGTCATAGCGATGTaGGGAATGGCCAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLGVIAM*GMARVT
Trigger: TGTCACTCTGGCCATTCCCAACATCGCTATGACTCC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTTTGTCCATCTCTTCCTaGGCTACCAGAAGTCCATAC +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAALSISS*ATRSPY
Trigger: GTATGGACTTCTGGTAGCCAAGGAAGAGATGGACAA...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGGCATATTGTACCTGTaGCTAAGGAGAGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLGILYL*LRREPS
Trigger: GCTGGGCTCTCTCCTTAGCAACAGGTACAATATGCC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTAACACTGAACCACATTaGGTATCTCATGTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAANTEPH*VSHVPV
Trigger: CACGGGCACATGAGATACCAAATGTGGTTCAGTGTT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGGTTCAAAAACAATCTaGCAGTTTGGAGCCATGGGG +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAAGSKTI*QFGAMG
Trigger: CCCCATGGCTCCAAACTGCAAGATTGTTTTTGAACC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAAACCATCCCATTTCTaGAGACGGTGGCGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLKPSHF*RRWREK
Trigger: CTTCTCCCGCCACCGTCTCAAGAAATGGGATGGTTT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAAGTCGGTCCGCACATaGTCCACATTTGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLKSVRT*STFGTR
Trigger: CCTTGTGCCAAATGTGGACAATGTGCGGACCGACTT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCTTTATCAGAGCATCTaGAACTTCCTCCGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAALYQSI*NFLREA
Trigger: GGCTTCTCGGAGGAAGTTCAAGATGCTCTGATAAAG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACCAGTATTCATTCTGTaGGCCAGGCTCTGCACTTCC +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIPVFIL*ARLCTS
Trigger: GGAAGTGCAGAGCCTGGCCAACAGAATGAATACTGG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATTCTGCACCTCAGCTTaGACCTTCTCTGCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIFCTSA*TFSAAC
Trigger: ACAGGCTGCAGAGAAGGTCAAAGCTGAGGTGCAGAA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCACAATGGCCTGTGCTTaGTCCTTTACCTTCTGCACC +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFTMACA*SFTFCT
Trigger: GGTGCAGAAGGTAAAGGACAAAGCACAGGCCATTGT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCTTCTAGGGCTGGCTTaGCTGCCTCTAATTTCTCTT +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAALLGLA*LPLISL
Trigger: AAGAGAAATTAGAGGCAGCAAAGCCAGCCCTAGAAG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATGGACAGGTCATCATTaGGAAGGCCTTGGAGGTTCC +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIWTGHH*EGLGGS
Trigger: GGAACCTCCAAGGCCTTCCAAATGATGACCTGTCCA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGTACCCATCCTCCATTaGCCATGGTCTGGTGCAACA +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLVPILH*PWSGAT
Trigger: TGTTGCACCAGACCATGGCAAATGGAGGATGGGTAC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAGTTTCATGTTCCTTTaGTCCCAGCCAGCACCCTCA +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSFMFL*SQPAPS
Trigger: TGAGGGTGCTGGCTGGGACAAAAGGAACATGAAACT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp CAACACAACACTGAACCACATTTGGTATCTCATGTGCCCGTGTCATaGTCTTCACCCAAGACTTATCTATATTGGAAAAGCGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: QHNTEPHLVSHVPVS*SSPKTYLYWKSAWL
Trigger: AAGCCAAGCGCTTTTCCAATATAGATAAGTCTTGGGTGAAGATCATGACACGGGCACATGAGATACCAAATGTGGTTCAGTGTTGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp TGGTACTTAGTCGCCATGTCTTCCAACCCCTCTATTTTGGAATCTTaGAGGACTGAGTATGTCTTGAAGGTAGTGAAGATGTCCATTATC +
Preference number: 5 (lower is better)
Translates to: WYLVAMSSNPSILES*RTEYVLKVVKMSII
Trigger: GATAATGGACATCTTCACTACCTTCAAGACATACTCAGTCCTGCAAGATTCCAAAATAGAGGGGTTGGAAGACATGGCGACTAAGTACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp AAGCCACTAAATGTTAATGTTTTGTTGTCCCACTCATTGATCACTTaGCTCAGCTTTTGCTCAATGTCTCTCTCCTTCACGGCACTGATG +
Preference number: 5 (lower is better)
Translates to: KPLNVNVLLSHSLIT*LSFCSMSLSFTALM
Trigger: CATCAGTGCCGTGAAGGAGAGAGACATTGAGCAAAAGCTGAGGCAAGTGATCAATGAGTGGGACAACAAAACATTAACATTTAGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp CAAGAAATCCACAAAATAAGCATCAACTCCACAATCCACTACAGGTaGTTTCTCTTCACCAAACTCCTCCTCTACCAAACTGACAACAGC +
Preference number: 5 (lower is better)
Translates to: QEIHKISINSTIHYR*FLFTKLLLYQTDNS
Trigger: GCTGTTGTCAGTTTGGTAGAGGAGGAGTTTGGTGAAGAGAAAGCACCTGTAGTGGATTGTGGAGTTGATGCTTATTTTGTGGATTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp ATTCAGCTGCCTCTTTATCTCAAGAAGCTGAGGATACGGTGTAACTaGCAAACCAAAAAGTTCCTCTCCTCCAGTGTAGGTGATGTATTT +
Preference number: 5 (lower is better)
Translates to: IQLPLYLKKLRIRCN*QTKKFLSSSVGDVF
Trigger: AAATACATCACCTACACTGGAGGAGAGGAACTTTTTGGTTTGCCAGTTACACCGTATCCTCAGCTTCTTGAGATAAAGAGGCAGCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp GCAGTCGAGAGATTTATCGTAGGCATTTGGAAGCGGCTCCTCTTCTaGGTTTTCTTTATCAAACCAAACTCTCCACATCTTTTCATTCCT +
Preference number: 5 (lower is better)
Translates to: AVERFIVGIWKRLLF*VFFIKPNSPHLFIP
Trigger: AGGAATGAAAAGATGTGGAGAGTTTGGTTTGATAAAGAAAACCCAGAAGAGGAGCCGCTTCCAAATGCCTACGATAAATCTCTCGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTCCTGAAAGCAGGATaGGTATCCCTGCTTGAGCTT +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKILLKAG*VSLLEL
Trigger: AAGCTCAAGCAGGGATACCAATCCTGCTTTCAGGAG...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAACTCAATCAAGTCATaGACCCGGTCAAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKINSIKS*TRSSSS
Trigger: GCTGCTGCTTGACCGGGTCAATGACTTGATTGAGTT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACGCAAAGTGTCCACTTaGTCCATCTCTTCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGRKVST*SISSLA
Trigger: AGCCAAGGAAGAGATGGACAAAGTGGACACTTTGCG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTCCACTCATTGATCACTaGCCTCAGCTTTTGCTCAAT +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAAPLIDH*PQLLLN
Trigger: ATTGAGCAAAAGCTGAGGCAAGTGATCAATGAGTGG...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACCTCCCGAGAGGAGATaGACAGAATCCGATCATAGA +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGPPERR*TESDHR
Trigger: TCTATGATCGGATTCTGTCAATCTCCTCTCGGGAGG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGACGGGTTCTTGAATATTaGCAGCTGCCTGGCGAATCA +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGRVLEY*QLPGES
Trigger: TGATTCGCCAGGCAGCTGCAAATATTCAAGAACCCG...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAAACAATCTTGCAGTTaGGAGCCATGGGGATCCGGT +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGKQSCS*EPWGSG
Trigger: ACCGGATCCCCATGGCTCCAAACTGCAAGATTGTTT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAAGGATTTCAGCCTCTaGAGGAGACCGTCTCTTGAG +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIKDFSL*RRPSLE
Trigger: CTCAAGAGACGGTCTCCTCAAGAGGCTGAAATCCTT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATCCAGTACCTCCATCTaGAACTCCAGGTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGSSTSI*NSRFWM
Trigger: CATCCAGAACCTGGAGTTCAAGATGGAGGTACTGGA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTATTAACAGCACAGCCTaGCCTTGTTTGGCAATGGTT +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAAINSTA*PCLAMV
Trigger: AACCATTGCCAAACAAGGCAAGGCTGTGCTGTTAAT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTTGATGATGACTGTTTaGGCTGTCCCTTGCTCACCA +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFLMMTV*AVPCSP
Trigger: TGGTGAGCAAGGGACAGCCAAAACAGTCATCATCAA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGTTATAGAACCCACTTaGTTCCATCAGCTGTCGGAC +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFVIEPT*FHQLSD
Trigger: GTCCGACAGCTGATGGAACAAAGTGGGTTCTATAAC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTGAAGGCAAGGTACAGTaGAATATGGAGAACTGTCTC +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAAEGKVQ*NMENCL
Trigger: GAGACAGTTCTCCATATTCAACTGTACCTTGCCTTC...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGAGACCCTTGAGTGCTaGTCAGGCGGTAAAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGETLEC*SGGKAN
Trigger: ATTTGCTTTACCGCCTGACAAGCACTCAAGGGTCTC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCCTTGTAATTGGGCTCTaGACAGACCTGGCTAAGGAA +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFLVIGL*TDLAKE
Trigger: TTCCTTAGCCAGGTCTGTCAAGAGCCCAATTACAAG...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTAGAAACTCCTCATGTTaGACTAGGTTCCTCTGGATG +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAARNSSC*TRFLWM
Trigger: CATCCAGAGGAACCTAGTCAAACATGAGGAGTTTCT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCATTTATCGTAGGCATTaGGAAGCGGCTCCTCTTCTG +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFIYRRH*EAAPLL
Trigger: CAGAAGAGGAGCCGCTTCCAAATGCCTACGATAAAT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp CTAGAGCCAAGTAGTCCGTGGGTTCCTTCAGAGATTTTAGTTCAATaGTGTCACATTTTTGAAGGTTCACCTTCTCCTTCAGACTGTTCT +
Preference number: 5 (lower is better)
Translates to: LEPSSPWVPSEILVQ*CHIFEGSPSPSDCS
Trigger: AGAACAGTCTGAAGGAGAAGGTGAACCTTCAAAAATGTGACATCATTGAACTAAAATCTCTGAAGGAACCCACGGACTACTTGGCTCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp TTCGTGGTAATCTCGATCAGCATGTTCAGTAGCTCTAGGAAGGCCTaGTTGGTCTTCTGCATGATTTTCTTATCAAACTTGGCATTTCGA +
Preference number: 5 (lower is better)
Translates to: FVVISISMFSSSRKA*LVFCMIFLSNLAFR
Trigger: TCGAAATGCCAAGTTTGATAAGAAAATCATGCAGAAGACCAATCAGGCCTTCCTAGAGCTACTGAACATGCTGATCGAGATTACCACGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTCTTCCACTTCTGGTTaGTTCAGGTCCAAACAGGAA +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSSTSG*FRSKQE
Trigger: TTCCTGTTTGGACCTGAACAAACCAGAAGTGGAAGA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAAGCAGCTCCAGGTCCTaGATCTTTGCAAAGGCATTT +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLSSSRS*IFAKAF
Trigger: AAATGCCTTTGCAAAGATCAAGGACCTGGAGCTGCT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATCTTCTTTCTTGCAGTaGCTGTCAATGGCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGSSFLQ*LSMAES
Trigger: GCTCTCTGCCATTGACAGCAACTGCAAGAAAGAAGA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGTGATAACTTCCTTCTaGGTGGAGCTGATGACTGTG +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGVITSF*VELMTV
Trigger: CACAGTCATCAGCTCCACCAAGAAGGAAGTTATCAC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAACTTAAAGGTCTCATaGCCCACATCCAGACTGTGC +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGNLKVS*PTSRLC
Trigger: GCACAGTCTGGATGTGGGCAATGAGACCTTTAAGTT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAATGATGTCTGTTGAGTaGGAAAGGCACTGCACCCAT +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGMMSVE*ERHCTH
Trigger: ATGGGTGCAGTGCCTTTCCAACTCAACAGACATCAT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGGGGCTGTGATTGCTTaGGGATTCATCCTCATTTCT +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLGAVIA*GFILIS
Trigger: AGAAATGAGGATGAATCCCAAAGCAATCACAGCCCC...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCAGTTCGTCTGTGTCTTaGATGACCTCTGAAGTGATG +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSSSVS*MTSEVM
Trigger: CATCACTTCAGAGGTCATCAAAGACACAGACGAACT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACCCGATGACAGGACATaGTTCATGTACTCCAGAAAC +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLPDDRT*FMYSRN
Trigger: GTTTCTGGAGTACATGAACAATGTCCTGTCATCGGG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAATCATTTGGAAGGCCTaGGAGGTTCCATTCGCTGAT +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLIIWKA*EVPFAD
Trigger: ATCAGCGAATGGAACCTCCAAGGCCTTCCAAATGAT...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAAATCCAGATCTTGCCTaGAGTCTGAGGGTCAATGAG +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKINPDLA*SLRVNE
Trigger: CTCATTGACCCTCAGACTCAAGGCAAGATCTGGATT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATCCTCAGCTGTCTTTTaGGTGTTGCTCAGCACAATG +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGSSAVF*VLLSTM
Trigger: CATTGTGCTGAGCAACACCAAAAAGACAGCTGAGGA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATCCAAAGCCCATCCTTaGTTGGCTCGAGTTATTTCC +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLSKAHP*LARVIS
Trigger: GGAAATAACTCGAGCCAACAAAGGATGGGCTTTGGA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp TATATTTTCTGTAGAAGATTCAGCTGCCTCTTTATCTCAAGAAGCTaGGGATACGGTGTAACTGGCAAACCAAAAAGTTCCTCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: YIFCRRFSCLFISRS*GYGVTGKPKSSSPP
Trigger: TGGAGGAGAGGAACTTTTTGGTTTGCCAGTTACACCGTATCCTCAGCTTCTTGAGATAAAGAGGCAGCTGAATCTTCTACAGAAAATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp TTAGGTATATTCAGTCTTTCGAATTTCTTCAGCGTGCTTAGAGCTTaGCTCGTGCTTGGAATCTTTTCAAATGTGATGTCCATGAACCTC +
Preference number: 5 (lower is better)
Translates to: LGIFSLSNFFSVLRA*LVLGIFSNVMSMNL
Trigger: GAGGTTCATGGACATCACATTTGAAAAGATTCCAAGCACGAGGCAAGCTCTAAGCACGCTGAAGAAATTCGAAAGACTGAATATACCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TATTCTTATAGTAATTCTGGGTTTGCACTGGGATGGGTAAGTTTATaGATGCTATCTCCAGAGTTTCTTGCAGCTCATTTTCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: YSYSNSGFALGWVSL*MLSPEFLAAHFPPP
Trigger: AGGTGGAGGAAAATGAGCTGCAAGAAACTCTGGAGATAGCATCCATAAACTTACCCATCCCAGTGCAAACCCAGAATTACTATAAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CAAGCTCTGGATGTACTGAAGATAGCCATCCACTGTACTGCATTTTaGAATGTTGTATCCTTGGTAAAAGGTGAAATCTGGTCCAAACAT +
Preference number: 5 (lower is better)
Translates to: QALDVLKIAIHCTAF*NVVSLVKGEIWSKH
Trigger: ATGTTTGGACCAGATTTCACCTTTTACCAAGGATACAACATTCCAAAATGCAGTACAGTGGATGGCTATCTTCAGTACATCCAGAGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGATATCTCCAGAGTTTCTaGCAGCTCATTTTCCTCCAC +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGYLQSF*QLIFLH
Trigger: GTGGAGGAAAATGAGCTGCAAGAAACTCTGGAGATA...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCGCTTTGAATGGCATATaGTACCTGTTGCTAAGGAGA +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFALNGI*YLLLRR
Trigger: TCTCCTTAGCAACAGGTACAATATGCCATTCAAAGC...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTCTTCATCAATCAGTTaGGAAAGATTCATGTCCCGC +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSSSIS*ERFMSR
Trigger: GCGGGACATGAATCTTTCCAAACTGATTGATGAAGA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATATGTTCCCCTTTCTTaGCTTTCAGTGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLYVPLS*LSVSSS
Trigger: GGAGGAAGACACTGAAAGCAAAGAAAGGGGAACATA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACAGCACAGCCTTGCCTaGTTTGGCAATGGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLQHSLA*FGNGFN
Trigger: ATTAAAACCATTGCCAAACAAGGCAAGGCTGTGCTG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAGATGTGACGATTCTCTaGCACTATCAAGTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIDVTIL*HYQVGL
Trigger: AAGGCCAACTTGATAGTGCAAGAGAATCGTCACATC...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAAAAGCCCATCCTTTGTaGGCTCGAGTTATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGKAHPL*ARVISC
Trigger: ACAGGAAATAACTCGAGCCAACAAAGGATGGGCTTT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTAGCTCAAAAAGCACTTaGGGTTTGGATTCAATGAGT +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAASSKST*GLDSMS
Trigger: ACTCATTGAATCCAAACCCAAAGTGCTTTTTGAGCT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CATTCTTTCAATCTGATTACCCTCAAGAAGAGCATCTTCCACTTCTaGTTTGTTCAGGTCCAAACAGGAAGCTACAATTGCAAACAGATA +
Preference number: 5 (lower is better)
Translates to: HSFNLITLKKSIFHF*FVQVQTGSYNCKQI
Trigger: TATCTGTTTGCAATTGTAGCTTCCTGTTTGGACCTGAACAAACCAGAAGTGGAAGATGCTCTTCTTGAGGGTAATCAGATTGAAAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TCTAAGAAGTTATACTCTTTCTTCTTTATGGCAGCAACAATGTCCTaGTACTTAGTCGCCATGTCTTCCAACCCCTCTATTTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: SKKLYSFFFMAATMS*YLVAMSSNPSILES
Trigger: AGATTCCAAAATAGAGGGGTTGGAAGACATGGCGACTAAGTACCAGGACATTGTTGCTGCCATAAAGAAGAAAGAGTATAACTTCTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp CCTTTAATGAGAGTGAGAAACTCCTCATGTTTGACTAGGTTCCTCTaGATGTCAATCTTTAGGGTGAGCAACAAAGTGAACAGGAATTTA +
Preference number: 5 (lower is better)
Translates to: PLMRVRNSSCLTRFL*MSIFRVSNKVNRNL
Trigger: TAAATTCCTGTTCACTTTGTTGCTCACCCTAAAGATTGACATCCAGAGGAACCTAGTCAAACATGAGGAGTTTCTCACTCTCATTAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTAATGATGTCACATTTTaGAAGGTTCACCTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAANDVTF*KVHLLL
Trigger: AAGGAGAAGGTGAACCTTCAAAAATGTGACATCATT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACACAGCTGCTATTTTTaGCATAACAATCTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLHSCYF*HNNLLR
Trigger: CCTCAGGAGATTGTTATGCAAAAAATAGCAGCTGTG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATCACTGAAATTCTTTTaGAACATGTCCCGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLSLKFF*NMSRFW
Trigger: CCAGAAGCGGGACATGTTCAAAAAGAATTTCAGTGA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATTCCTGCTCCAGGCTTaGAAAATAAAGAATCCTGGA +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIFLLQA*KIKNPG
Trigger: TCCAGGATTCTTTATTTTCAAAGCCTGGAGCAGGAA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACAAGACTTATCTATATaGGAAAAGCGCTTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLQDLSI*EKRLAS
Trigger: GGAAGCCAAGCGCTTTTCCAATATAGATAAGTCTTG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAACAGCCTTGCCTTGTTaGGCAATGGTTTTAATTAGG +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGTALPC*AMVLIR
Trigger: CCTAATTAAAACCATTGCCAAACAAGGCAAGGCTGT...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATCTATCACTTCTTCATaGATCGTGTCTTTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLSITSS*IVSLGN
Trigger: GTTCCCCAAAGACACGATCAATGAAGAAGTGATAGA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTATCCTTCATCCTTCTTTaGTTTGCAGTTACATCCTCC +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLSFILL*FAVTSS
Trigger: GGAGGATGTAACTGCAAACAAAAGAAGGATGAAGGA...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCATATTAGCAATCCTCTaGCTTGTAATTGGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFILAIL*LVIGLL
Trigger: CAAGAGCCCAATTACAAGCAAGAGGATTGCTAATAT...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGGCATTGAAGTCTGCTaGGTTAAATTCGTAAGGGAT +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGGIEVC*VKFVRD
Trigger: ATCCCTTACGAATTTAACCAAGCAGACTTCAATGCC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTGGAATGTTGTATCCTaGGTAAAAGGTGAAATCTGG +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFWNVVS*VKGEIW
Trigger: CCAGATTTCACCTTTTACCAAGGATACAACATTCCA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp AAGGTAACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTACCACTGTACTGCATTTaGGAATGTTGTATCCTTGGT +
Preference number: 5 (lower is better)
Translates to: KVTETTFTQASHVTLENLPLYCI*ECCILG
Trigger: ACCAAGGATACAACATTCCAAAATGCAGTACAGTGG...TAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGTTACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACAGAAACAACCTTCACACAAGCTTCCCATGTTACTTTAGAGAACCTAGCTGCTAAAAGCACTTTGGGTTaGGATTCAATGAGTTTCATG +
Preference number: 5 (lower is better)
Translates to: TETTFTQASHVTLENLAAKSTLG*DSMSFM
Trigger: CATGAAACTCATTGAATCCAAACCCAAAGTGCTTTT...AGCAGCTAGGTTCTCTAAAGTAACATGGGAAGCTTGTGTGAAGGTTGTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 90 bp TCACGTCTGACCAAAGGGTATCTTGATAACTATTCACAGTCTCGATaGCATTGTTGTACAGGCTGTATATTTTCTGTAGAAGATTCAGCT +
Preference number: 5 (lower is better)
Translates to: SRLTKGYLDNYSQSR*HCCTGCIFSVEDSA
Trigger: AGCTGAATCTTCTACAGAAAATATACAGCCTGTACAACAATGTCATCGAGACTGTGAATAGTTATCAAGATACCCTTTGGTCAGACGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 90 bp TGTTGTCAGAAATATTCTTATAGTAATTCTGGGTTTGCACTGGGATaGGTAAGTTTATGGATGCTATCTCCAGAGTTTCTTGCAGCTCAT +
Preference number: 5 (lower is better)
Translates to: CCQKYSYSNSGFALG*VSLWMLSPEFLAAH
Trigger: ATGAGCTGCAAGAAACTCTGGAGATAGCATCCATAAACTTACCCATCCCAGTGCAAACCCAGAATTACTATAAGAATATTTCTGACAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp CTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATACTTTGGAGTCTCGATGACATTGTaGTACAGGCTGTATATTTTC +
Preference number: 5 (lower is better)
Translates to: LTYICPALTEKRRLKYFGVSMTL*YRLYIF
Trigger: GAAAATATACAGCCTGTACAACAATGTCATCGAGAC...TCCAAAGTATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATCATCCTTCTTTTGTTaGCAGTTACATCCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKISSFFC*QLHPPR
Trigger: TCTTGGAGGATGTAACTGCAAACAAAAGAAGGATGA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp TTACCTCAAAAGAAACTACAGCTAGTAATCAGACCTACACCTGAACCCCAATTCTCGTCCTTCATAAATTaGGTGACTTCATTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: LPQKKLQLVIRPTPEPQFSSFIN*VTSLQR
Trigger: TCTTTGCAATGAAGTCACCAAATTTATGAAGGACGA...GAATTGGGGTTCAGGTGTAGGTCTGATTACTAGCTGTAGTTTCTTTTGAGGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 90 bp CTCAGAGGTGTTATAGTAGTGAGAGATGCTGTAAACCATCTTAATTaGATTTATAAGTGTAGGAATCGCATCTATCATAGTTACAGGGTC +
Preference number: 5 (lower is better)
Translates to: LRGVIVVRDAVNHLN*IYKCRNRIYHSYRV
Trigger: GACCCTGTAACTATGATAGATGCGATTCCTACACTTATAAATGCAATTAAGATGGTTTACAGCATCTCTCACTACTATAACACCTCTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATAATTTTCTTATCAAACTaGGCATTTCGAAGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIIFLSN*AFRRAS
Trigger: AGAAGCCCTTCGAAATGCCAAGTTTGATAAGAAAAT...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS-3UTR CAA 90 bp ACACAGTCTGACTTATATATGCCCAGCACTGACAGAGAAACGAAGACTAAAATATGGTTTCTAAAGTACTaGTGGTTTAGAGATGTGATC +
Preference number: 5 (lower is better)
Translates to: TQSDLYMPSTDRETKTKIWFLKY*WFRDVI
Trigger: GATCACATCTCTAAACCACAAGTACTTTAGAAACCA...TATTTTAGTCTTCGTTTCTCTGTCAGTGCTGGGCATATATAAGTCAGACTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CAGATGCTCCGGGTCCACCTCCCCGGCCTGCTCCTTTaGGGGGATCAGGCCTTGCAGCATGTGGGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: QMLRVHLPGLLL*GDQALQHVGAL
Trigger: CAGAGCACCCACATGCTGCAAGGCCTGATCCCCCCAAAGGAGCAGGCCGGGGAGGTGGACCCGGAGCATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp GCCACCACAGCCTCCCGTGTCTCGTCCCCTCCACCGGAGCTGTCCTaGGGCTGGATGCCCAGGATAGTGTCCAGCACATCCTTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: ATTASRVSSPPPELS*GWMPRIVSSTSLAS
Trigger: GCTGGCCAAGGATGTGCTGGACACTATCCTGGGCATCCAGCCCAAGGACAGCTCCGGTGGAGGGGACGAGACACGGGAGGCTGTGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp GCCTCCCGTGTCTCGTCCCCTCCACCGGAGCTGTCCTaGGGCTGGATGCCCAGGATAGTGTCCAGCACATCC +
Preference number: 6 (lower is better)
Translates to: ASRVSSPPPELS*GWMPRIVSSTS
Trigger: GGATGTGCTGGACACTATCCTGGGCATCCAGCCCAAGGACAGCTCCGGTGGAGGGGACGAGACACGGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp AACATGGTGTCCCCAGCGTCCGTCAGCTGTGGCAGGTaGAGTGTGGGCCCTTCTCGAGAGCGCAGCCAGAGT +
Preference number: 6 (lower is better)
Translates to: NMVSPASVSCGR*SVGPSRERSQS
Trigger: ACTCTGGCTGCGCTCTCGAGAAGGGCCCACACTGCACCTGCCACAGCTGACGGACGCTGGGGACACCATGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp GTAGTCGAACATGGTGTCCCCAGCGTCCGTCAGCTGTaGCAGGTGCAGTGTGGGCCCTTCTCGAGAGCGCAG +
Preference number: 6 (lower is better)
Translates to: VVEHGVPSVRQL*QVQCGPFSRAQ
Trigger: CTGCGCTCTCGAGAAGGGCCCACACTGCACCTGCCACAGCTGACGGACGCTGGGGACACCATGTTCGACTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp TGCCCAGGGTGCGCACTGTGGCAATGTCAGAGGGCTTaGTGGTCTGGAGTGCGGCTTCCGCCTCTTCTAGGG +
Preference number: 6 (lower is better)
Translates to: CPGCALWQCQRA*WSGVRLPPLLG
Trigger: CCCTAGAAGAGGCGGAAGCCGCACTCCAGACCATCAAGCCCTCTGACATTGCCACAGTGCGCACCCTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CTCCACATCATGGCAAAGACAAACAGCCTCCCCAGATaGTCCGGGTCCACCTCCCCGGCCTGCTCCTTTGGG +
Preference number: 6 (lower is better)
Translates to: LHIMAKTNSLPR*SGSTSPACSFG
Trigger: CCCAAAGGAGCAGGCCGGGGAGGTGGACCCGGAGCATCTGGGGAGGCTGTTTGTCTTTGCCATGATGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CTGCCCAGGGTGCGCACTGTGGCAATGTCAGAGGGCTaGATGGTCTGGAGTGCGGCTTCCGCCTCTTCTAGG +
Preference number: 6 (lower is better)
Translates to: LPRVRTVAMSEG*MVWSAASASSR
Trigger: CCTAGAAGAGGCGGAAGCCGCACTCCAGACCATCAAGCCCTCTGACATTGCCACAGTGCGCACCCTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AGCCTTCCAGAGAGCTCAGGAACTCCTGCCGAATGCTaGATGCATCCTGTAGCCCCTCGAGCTCACCCCAGC +
Preference number: 6 (lower is better)
Translates to: SLPESSGTPAEC*MHPVAPRAHPS
Trigger: GCTGGGGTGAGCTCGAGGGGCTACAGGATGCATCCAGCATTCGGCAGGAGTTCCTGAGCTCTCTGGAAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TTCAGGGACGTCCAAGTCAGGACAGCCAGGCCCGGCTaGAGGGCTTCATCCACTCTAGCCAGGTGTGGAAAC +
Preference number: 6 (lower is better)
Translates to: FRDVQVRTARPG*RASSTLARCGN
Trigger: GTTTCCACACCTGGCTAGAGTGGATGAAGCCCTCCAGCCGGGCCTGGCTGTCCTGACTTGGACGTCCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ACCCCAGAGGACCGAACTTGCGCCGCTCCTGGACAGTaGAGTGTAGGAAGGCCACCGCATATAGCATGGGCT +
Preference number: 6 (lower is better)
Translates to: TPEDRTCAAPGQ*SVGRPPHIAWA
Trigger: AGCCCATGCTATATGCGGTGGCCTTCCTACACTCCACTGTCCAGGAGCGGCGCAAGTTCGGTCCTCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CAAAGCCTTCCAGAGAGCTCAGGAACTCCTGCCGAATaGTGGATGCATCCTGTAGCCCCTCGAGCTCACCCC +
Preference number: 6 (lower is better)
Translates to: QSLPESSGTPAE*WMHPVAPRAHP
Trigger: GGGGTGAGCTCGAGGGGCTACAGGATGCATCCAGCATTCGGCAGGAGTTCCTGAGCTCTCTGGAAGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GGTTTGGCCTCCGCAGTCCTCAGCACAAAGGGATGCTaGTGGAAGAGTTGCATTGGCTGCTCCAGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: GLASAVLSTKGC*WKSCIGCSSLW
Trigger: CCACAGGCTGGAGCAGCCAATGCAACTCTTCCAGCAGCATCCCTTTGTGCTGAGGACTGCGGAGGCCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp GATGCATCCTGTAGCCCCTCGAGCTCACCCCAGCCATaGCTTGAGGCCCTGAGAGCTGGGATGAAGATGTCT +
Preference number: 6 (lower is better)
Translates to: DASCSPSSSPQP*LEALRAGMKMS
Trigger: AGACATCTTCATCCCAGCTCTCAGGGCCTCAAGCCATGGCTGGGGTGAGCTCGAGGGGCTACAGGATGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TGGGCTGCAGAGCGCCTAACTCATTCTGAACATCACTaGCCCGGGCCAGCAGCTTCTCCCAAGCATAGCGCA +
Preference number: 6 (lower is better)
Translates to: WAAERLTHSEHH*PGPAASPKHSA
Trigger: TGCGCTATGCTTGGGAGAAGCTGCTGGCCCGGGCCAGTGATGTTCAGAATGAGTTAGGCGCTCTGCAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp GTGCGCACTGTGGCAATGTCAGAGGGCTTGATGGTCTaGAGTGCGGCTTCCGCCTCTTCTAGGGCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: VRTVAMSEGLMV*SAASASSRAGF
Trigger: AAAGCCAGCCCTAGAAGAGGCGGAAGCCGCACTCCAGACCATCAAGCCCTCTGACATTGCCACAGTGCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TGTAGGAAGGCCACCGCATATAGCATGGGCTTCCACTaGGCCCCCACACTCACATCCAGTAGGTCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: CRKATAYSMGFH*APTLTSSRSWL
Trigger: GAGCCAGGACCTACTGGATGTGAGTGTGGGGGCCCAGTGGAAGCCCATGCTATATGCGGTGGCCTTCCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CCTCCGCAGTCCTCAGCACAAAGGGATGCTGCTGGAAGAGTTGCATaGGCTGCTCCAGCCTGTGGAATAGCTGCCGGGCCCACAAGATCT +
Preference number: 6 (lower is better)
Translates to: PPQSSAQRDAAGRVA*AAPACGIAAGPTRS
Trigger: AGATCTTGTGGGCCCGGCAGCTATTCCACAGGCTGGAGCAGCCAATGCAACTCTTCCAGCAGCATCCCTTTGTGCTGAGGACTGCGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp ATGGCCTGTTCATACTCTGCCTGCACCACATCAAGCTCTGCTTGCTaGGCATCCAGCTCAGCCTGGGCTTTCTGCAGGTCCTGCATGGCC +
Preference number: 6 (lower is better)
Translates to: MACSYSACTTSSSAC*ASSSAWAFCRSCMA
Trigger: GGCCATGCAGGACCTGCAGAAAGCCCAGGCTGAGCTGGATGCCAAGCAAGCAGAGCTTGATGTGGTGCAGGCAGAGTATGAACAGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp GCTCGGGGCCCCACATCGTCCGCTTCCTTCCGTAGCTaGCTGTTCTCAGCAAGGATCTGCTCCATCTGTTTG +
Preference number: 6 (lower is better)
Translates to: ARGPTSSASFRS*LFSARICSICL
Trigger: CAAACAGATGGAGCAGATCCTTGCTGAGAACAGTCAGCTACGGAAGGAAGCGGACGATGTGGGGCCCCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp ATGCCCACAAAGCCTTCCAGAGAGCTCAGGAACTCCTaGCGAATGCTGGATGCATCCTGTAGCCCCTCGAGC +
Preference number: 6 (lower is better)
Translates to: MPTKPSRELRNS*RMLDASCSPSS
Trigger: GCTCGAGGGGCTACAGGATGCATCCAGCATTCGGCAGGAGTTCCTGAGCTCTCTGGAAGGCTTTGTGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp AGCACAAAGGGATGCTGCTGGAAGAGTTGCATTGGCTaGTCCAGCCTGTGGAATAGCTGCCGGGCCCACAAG +
Preference number: 6 (lower is better)
Translates to: STKGCCWKSCIG*SSLWNSCRAHK
Trigger: CTTGTGGGCCCGGCAGCTATTCCACAGGCTGGAGCAGCCAATGCAACTCTTCCAGCAGCATCCCTTTGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp ACAGGTTTGGCCTCCGCAGTCCTCAGCACAAAGGGATaGTGCTGGAAGAGTTGCATTGGCTGCTCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: TGLASAVLSTKG*CWKSCIGCSSL
Trigger: CAGGCTGGAGCAGCCAATGCAACTCTTCCAGCAGCATCCCTTTGTGCTGAGGACTGCGGAGGCCAAACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TGCTGCTGGAAGAGTTGCATTGGCTGCTCCAGCCTGTaGAATAGCTGCCGGGCCCACAAGATCTTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: CCWKSCIGCSSL*NSCRAHKIFPA
Trigger: AGCTGGGAAGATCTTGTGGGCCCGGCAGCTATTCCACAGGCTGGAGCAGCCAATGCAACTCTTCCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ATATTCCACCCCAGAGGACCGAACTTGCGCCGCTCCTaGACAGTGGAGTGTAGGAAGGCCACCGCATATAGC +
Preference number: 6 (lower is better)
Translates to: IFHPRGPNLRRS*TVECRKATAYS
Trigger: GCTATATGCGGTGGCCTTCCTACACTCCACTGTCCAGGAGCGGCGCAAGTTCGGTCCTCTGGGGTGGAATAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp ACGGCGCGTCAGGGGTACCAGCTTTATCAGAGCATCTaGAACTTCCTCCGAGAAGCCCCGCTGGGCACAGTA +
Preference number: 6 (lower is better)
Translates to: TARQGYQLYQSI*NFLREAPLGTV
Trigger: TACTGTGCCCAGCGGGGCTTCTCGGAGGAAGTTCAAGATGCTCTGATAAAGCTGGTACCCCTGACGCGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp CTTTTTCATCTTTCCGGAGGCAGGATTCACCCCTCCTaGGGAACCACAGTGCCCTGCTTCTGCTCCCTCCAC +
Preference number: 6 (lower is better)
Translates to: LFHLSGGRIHPS*GTTVPCFCSLH
Trigger: GTGGAGGGAGCAGAAGCAGGGCACTGTGGTTCCTCAGGAGGGGTGAATCCTGCCTCCGGAAAGATGAAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp CAGTTGCTGTCAATGGCAGAGAGCTGGCCCCGGCATTaGAGGAAGATGCCAAGGCCTCAGAATGCCCTTCTC +
Preference number: 6 (lower is better)
Translates to: QLLSMAESWPRH*RKMPRPQNALL
Trigger: GAGAAGGGCATTCTGAGGCCTTGGCATCTTCCTTCAATGCCGGGGCCAGCTCTCTGCCATTGACAGCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp ACATCCAGACTGTGCCCAGTGAGAGCAGTGATCCTCTaGCAGTGTCGTTCCACCATGGCGTTACTGGCCATG +
Preference number: 6 (lower is better)
Translates to: TSRLCPVRAVIL*QCRSTMALLAM
Trigger: CATGGCCAGTAACGCCATGGTGGAACGACACTGGCAGAGGATCACTGCTCTCACTGGGCACAGTCTGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TTCCCTGACCCACTAGGCCCCAGGGTCATCATGCCGTaGCTCACCCTCTGCGTTTCAAACAACTGGATGACT +
Preference number: 6 (lower is better)
Translates to: FPDPLGPRVIMP*LTLCVSNNWMT
Trigger: AGTCATCCAGTTGTTTGAAACGCAGAGGGTGAGGCACGGCATGATGACCCTGGGGCCTAGTGGGTCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GAGTTCCATCCTCCGGCGACCTTCCAACTCCAGGACTaGGCCCACACTCCACATCATGGCAAAGACAAACAG +
Preference number: 6 (lower is better)
Translates to: EFHPPATFQLQD*AHTPHHGKDKQ
Trigger: CTGTTTGTCTTTGCCATGATGTGGAGTGTGGGCGCAGTCCTGGAGTTGGAAGGTCGCCGGAGGATGGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TTCCTCCGAGAAGCCCCGCTGGGCACAGTAGTAGCCTaGCCCAATCACACCAAAGATCTTGTCCATGGAAGC +
Preference number: 6 (lower is better)
Translates to: FLREAPLGTVVA*PNHTKDLVHGS
Trigger: GCTTCCATGGACAAGATCTTTGGTGTGATTGGGGCAGGCTACTACTGTGCCCAGCGGGGCTTCTCGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GGCCTGTTCATACTCTGCCTGCACCACATCAAGCTCTaGTTGCTTGGCATCCAGCTCAGCCTGGGCTTTCTG +
Preference number: 6 (lower is better)
Translates to: GLFILCLHHIKL*LLGIQLSLGFL
Trigger: CAGAAAGCCCAGGCTGAGCTGGATGCCAAGCAAGCAGAGCTTGATGTGGTGCAGGCAGAGTATGAACAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TGTAGAAGTACCCATCCTCCATTTGCCATGGTCTGGTaGAACAGCTTCCTCGCATGGACCTCCTGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: CRSTHPPFAMVW*NSFLAWTSWPW
Trigger: CCAGGGCCAGGAGGTCCATGCGAGGAAGCTGTTGCACCAGACCATGGCAAATGGAGGATGGGTACTTCTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp ATTCGTAAGGGATATTCCACCCCAGAGGACCGAACTTaGGCCGCTCCTGGACAGTGGAGTGTAGGAAGGCCA +
Preference number: 6 (lower is better)
Translates to: IRKGYSTPEDRT*AAPGQWSVGRP
Trigger: TGGCCTTCCTACACTCCACTGTCCAGGAGCGGCGCAAGTTCGGTCCTCTGGGGTGGAATATCCCTTACGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TTGGCCTCCGCAGTCCTCAGCACAAAGGGATGCTGCTaGAAGAGTTGCATTGGCTGCTCCAGCCTGTGGAAT +
Preference number: 6 (lower is better)
Translates to: LASAVLSTKGCC*KSCIGCSSLWN
Trigger: ATTCCACAGGCTGGAGCAGCCAATGCAACTCTTCCAGCAGCATCCCTTTGTGCTGAGGACTGCGGAGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp GCCCGGCTGGAGGGCTTCATCCACTCTAGCCAGGTGTaGAAACATCAACTGCTCGATGGCAGGAGGCATTTT +
Preference number: 6 (lower is better)
Translates to: ARLEGFIHSSQV*KHQLLDGRRHF
Trigger: AAAATGCCTCCTGCCATCGAGCAGTTGATGTTTCCACACCTGGCTAGAGTGGATGAAGCCCTCCAGCCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TGGGGTACACAGGCTCCAATGCCTCCAAGTACCGTTTaGCGCGACATAGTAGTCGAACATGGTGTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: WGTQAPMPPSTV*RDIVVEHGVPS
Trigger: GCTGGGGACACCATGTTCGACTACTATGTCGCGCCAAACGGTACTTGGAGGCATTGGAGCCTGTGTACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AGTGGAATTTCGCAGGCGTTGGGAGCATCTTCAGTTTaGTCATCTGCCACAGACGGCGCGTCAGGGGTACCA +
Preference number: 6 (lower is better)
Translates to: SGISQALGASSV*SSATDGASGVP
Trigger: TGGTACCCCTGACGCGCCGTCTGTGGCAGATGACCAAACTGAAGATGCTCCCAACGCCTGCGAAATTCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp GCAGTTGCTGTCAATGGCAGAGAGCTGGCCCCGGCATaGAAGGAAGATGCCAAGGCCTCAGAATGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: AVAVNGRELAPA*KEDAKASECPS
Trigger: AGAAGGGCATTCTGAGGCCTTGGCATCTTCCTTCAATGCCGGGGCCAGCTCTCTGCCATTGACAGCAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CTGGGGTACACAGGCTCCAATGCCTCCAAGTACCGTTaGGCGCGACATAGTAGTCGAACATGGTGTCCCCAG +
Preference number: 6 (lower is better)
Translates to: LGYTGSNASKYR*ARHSSRTWCPQ
Trigger: CTGGGGACACCATGTTCGACTACTATGTCGCGCCAAACGGTACTTGGAGGCATTGGAGCCTGTGTACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp AGCCCAGCAGCATCAAGCTATCCTCCATGCTGGCGATaGCTTCGGAGGTACTGTCTCCTCTCAGGAGGAGTT +
Preference number: 6 (lower is better)
Translates to: SPAASSYPPCWR*LRRYCLLSGGV
Trigger: AACTCCTCCTGAGAGGAGACAGTACCTCCGAAGTCATCGCCAGCATGGAGGATAGCTTGATGCTGCTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TCCTCAATAGGTCCCACTTGGAAGTCGGTGGAGATCTaGTGCTCCCTTATCTCCTTCAGGGCCGCCATTGCT +
Preference number: 6 (lower is better)
Translates to: SSIGPTWKSVEI*CSLISFRAAIA
Trigger: AGCAATGGCGGCCCTGAAGGAGATAAGGGAGCAGCAGATCTCCACCGACTTCCAAGTGGGACCTATTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TCACCTGCCAAGCCACTGATGAGCGTGGATGCTGTCTaGATCTTATGCCTACACCGGTCCGCATCTTCAAGC +
Preference number: 6 (lower is better)
Translates to: SPAKPLMSVDAV*ILCLHRSASSS
Trigger: GCTTGAAGATGCGGACCGGTGTAGGCATAAGATGCAGACAGCATCCACGCTCATCAGTGGCTTGGCAGGTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CTCCTTTTCACCTGCCAAGCCACTGATGAGCGTGGATaGTGTCTGCATCTTATGCCTACACCGGTCCGCATC +
Preference number: 6 (lower is better)
Translates to: LLFTCQATDERG*CLHLMPTPVRI
Trigger: GATGCGGACCGGTGTAGGCATAAGATGCAGACAGCATCCACGCTCATCAGTGGCTTGGCAGGTGAAAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CCTTGGCTATCCTGTTATAGCTGCGGATCACAGGTTTaGCCTCCGCAGTCCTCAGCACAAAGGGATGCTGCT +
Preference number: 6 (lower is better)
Translates to: PWLSCYSCGSQV*PPQSSAQRDAA
Trigger: AGCAGCATCCCTTTGTGCTGAGGACTGCGGAGGCCAAACCTGTGATCCGCAGCTATAACAGGATAGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TTGTCAAACACGTTCAGCAAATGGGCCTGGATGGTGTaGGAGTCCGATGCCTGGCCCAGAATCTCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: LSNTFSKWAWMV*ESDAWPRISSR
Trigger: TCTGCTGGAGATTCTGGGCCAGGCATCGGACTCCCACACCATCCAGGCCCATTTGCTGAACGTGTTTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TTCTGTAGAAGTACCCATCCTCCATTTGCCATGGTCTaGTGCAACAGCTTCCTCGCATGGACCTCCTGGCCC +
Preference number: 6 (lower is better)
Translates to: FCRSTHPPFAMV*CNSFLAWTSWP
Trigger: GGGCCAGGAGGTCCATGCGAGGAAGCTGTTGCACCAGACCATGGCAAATGGAGGATGGGTACTTCTACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ATATGTCCTTCTCAGTCCCGCCCGGAGGCCCTGAGGTaGCTCATTGGCAAACTTGATGGACATCTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: ICPSQSRPEALR*LIGKLDGHLKE
Trigger: CTCCTTCAGATGTCCATCAAGTTTGCCAATGAGCCACCTCAGGGCCTCCGGGCGGGACTGAGAAGGACATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CTGCAGGTCCTGCATGGCCAGGATGTGACGATTCTCTaGCACTATCAAGTTGGCCTTCAGAGGGAGCACCTC +
Preference number: 6 (lower is better)
Translates to: LQVLHGQDVTIL*HYQVGLQREHL
Trigger: GAGGTGCTCCCTCTGAAGGCCAACTTGATAGTGCAAGAGAATCGTCACATCCTGGCCATGCAGGACCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TTCAGCGTCTGCTGTATGTCTTCCAGGGCAGGAGTCATAGCGATGTaGGGAATGGCCAGAGTGACACTTGCCCGGAAAATGGGCAGATGG +
Preference number: 6 (lower is better)
Translates to: FSVCCMSSRAGVIAM*GMARVTLARKMGRW
Trigger: CCATCTGCCCATTTTCCGGGCAAGTGTCACTCTGGCCATTCCCAACATCGCTATGACTCCTGCCCTGGAAGACATACAGCAGACGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CACTGTCTAACCCCCTTGGGGACACTGATGATGCATTCCACGGCTTaGTTCAGCGTCTGCTGTATGTCTTCCAGGGCAGGAGTCATAGCG +
Preference number: 6 (lower is better)
Translates to: HCLTPLGTLMMHSTA*FSVCCMSSRAGVIA
Trigger: CGCTATGACTCCTGCCCTGGAAGACATACAGCAGACGCTGAACAAAGCCGTGGAATGCATCATCAGTGTCCCCAAGGGGGTTAGACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp ACACATATTCTGGGGTACACAGGCTCCAATGCCTCCAAGTACCGTTaGGCGCGACATAGTAGTCGAACATGGTGTCCCCAGCGTCCGTCA +
Preference number: 6 (lower is better)
Translates to: THILGYTGSNASKYR*ARHSSRTWCPQRPS
Trigger: TGACGGACGCTGGGGACACCATGTTCGACTACTATGTCGCGCCAAACGGTACTTGGAGGCATTGGAGCCTGTGTACCCCAGAATATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp CCTTCTCTTCTTTCAGTCGTTGCGTCAGAACTCGGGTaGCACTCTGCTTCCAGAGTTGTCGTCTGCCGATCC +
Preference number: 6 (lower is better)
Translates to: PSLLSVVASELG*HSASRVVVCRS
Trigger: GGATCGGCAGACGACAACTCTGGAAGCAGAGTGTCACCCGAGTTCTGACGCAACGACTGAAAGAAGAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp TCAGTTTGGAAAGATTCATGTCCCGCAGCACGCGCATaGCGATGGTGGATTCTGTATCCGTGGGACTGGCTC +
Preference number: 6 (lower is better)
Translates to: SVWKDSCPAARA*RWWILYPWDWL
Trigger: GAGCCAGTCCCACGGATACAGAATCCACCATCGTCATGCGCGTGCTGCGGGACATGAATCTTTCCAAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp GCCTGGGCTTTCTGCAGGTCCTGCATGGCCAGGATGTaGCGATTCTCTTGCACTATCAAGTTGGCCTTCAGA +
Preference number: 6 (lower is better)
Translates to: AWAFCRSCMARM*RFSCTIKLAFR
Trigger: TCTGAAGGCCAACTTGATAGTGCAAGAGAATCGTCACATCCTGGCCATGCAGGACCTGCAGAAAGCCCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp CTAGAGCAGGGTCTAATTCCTCTCCAACATCCTCGATaGGCAAAGGCCTCCCCAGTGAAAGGCTGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: LEQGLIPLQHPR*AKASPVKGCPP
Trigger: TGGAGGACAGCCTTTCACTGGGGAGGCCTTTGCTCATCGAGGATGTTGGAGAGGAATTAGACCCTGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CAAACTCCAAGAGGACCTTGGCTATCCTGTTATAGCTaGGGATCACAGGTTTGGCCTCCGCAGTCCTCAGCA +
Preference number: 6 (lower is better)
Translates to: QTPRGPWLSCYS*GSQVWPPQSSA
Trigger: TGCTGAGGACTGCGGAGGCCAAACCTGTGATCCGCAGCTATAACAGGATAGCCAAGGTCCTCTTGGAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TCAATAGGTCCCACTTGGAAGTCGGTGGAGATCTGCTaGTCCCTTATCTCCTTCAGGGCCGCCATTGCTATC +
Preference number: 6 (lower is better)
Translates to: SIGPTWKSVEIC*SLISFRAAIAI
Trigger: GATAGCAATGGCGGCCCTGAAGGAGATAAGGGAGCAGCAGATCTCCACCGACTTCCAAGTGGGACCTATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp AAGTCATCAATGGTCTTCTTCAGATCCAGAAAGGCCTaGCAATCCTTCAGGGCCCGAGGCAGCTTCCGACAC +
Preference number: 6 (lower is better)
Translates to: KSSMVFFRSRKA*QSFRARGSFRH
Trigger: GTGTCGGAAGCTGCCTCGGGCCCTGAAGGATTGGCAGGCCTTTCTGGATCTGAAGAAGACCATTGATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TGGAGAACTGTCTCTTCAAGCGCTGTGGTATGTCATTaGGTCCACCCCCAGGATGGATCATGGCTGCCAAGA +
Preference number: 6 (lower is better)
Translates to: WRTVSSSAVVCH*VHPQDGSWLPR
Trigger: TCTTGGCAGCCATGATCCATCCTGGGGGTGGACGCAATGACATACCACAGCGCTTGAAGAGACAGTTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CAAGGTCTGCTTCTCTGCCATGGCCTGTTCATACTCTaGCTGCACCACATCAAGCTCTGCTTGCTTGGCATC +
Preference number: 6 (lower is better)
Translates to: QGLLLCHGLFIL*LHHIKLCLLGI
Trigger: GATGCCAAGCAAGCAGAGCTTGATGTGGTGCAGGCAGAGTATGAACAGGCCATGGCAGAGAAGCAGACCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp AAGCCACTGATGAGCGTGGATGCTGTCTGCATCTTATaGCTACACCGGTCCGCATCTTCAAGCAAGGTCTGC +
Preference number: 6 (lower is better)
Translates to: KPLMSVDAVCIL*LHRSASSSKVC
Trigger: GCAGACCTTGCTTGAAGATGCGGACCGGTGTAGGCATAAGATGCAGACAGCATCCACGCTCATCAGTGGCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ACAGATAGTCATGCCGCCCATCCAGACGGGCCCTCTTaGCTTCCTTCTCTTCTTTCAGTCGTTGCGTCAGAA +
Preference number: 6 (lower is better)
Translates to: TDSHAAHPDGPS*LPSLLSVVASE
Trigger: TTCTGACGCAACGACTGAAAGAAGAGAAGGAAGCCAAGAGGGCCCGTCTGGATGGGCGGCATGACTATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TGTCTGTATCTCTCCAAACCTTCAGAAGCTTGGACTTaGCCGCAGCAAGCAATGCCAGCGCAGCCTTCACGT +
Preference number: 6 (lower is better)
Translates to: CLYLSKPSEAWT*PQQAMPAQPSR
Trigger: ACGTGAAGGCTGCGCTGGCATTGCTTGCTGCGGCCAAGTCCAAGCTTCTGAAGGTTTGGAGAGATACAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp GGCAGTTCTGTAGAAGTACCCATCCTCCATTTGCCATaGTCTGGTGCAACAGCTTCCTCGCATGGACCTCCT +
Preference number: 6 (lower is better)
Translates to: GSSVEVPILHLP*SGATASSHGPP
Trigger: AGGAGGTCCATGCGAGGAAGCTGTTGCACCAGACCATGGCAAATGGAGGATGGGTACTTCTACAGAACTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp ATGTCTGTATCTCTCCAAACCTTCAGAAGCTTGGACTaGGCCGCAGCAAGCAATGCCAGCGCAGCCTTCACG +
Preference number: 6 (lower is better)
Translates to: MSVSLQTFRSLD*AAASNASAAFT
Trigger: CGTGAAGGCTGCGCTGGCATTGCTTGCTGCGGCCAAGTCCAAGCTTCTGAAGGTTTGGAGAGATACAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TTGGACAACAGCTCGCTGCTCCACTGTCTAACCCCCTaGGGGACACTGATGATGCATTCCACGGCTTTGTTC +
Preference number: 6 (lower is better)
Translates to: LDNSSLLHCLTP*GTLMMHSTALF
Trigger: GAACAAAGCCGTGGAATGCATCATCAGTGTCCCCAAGGGGGTTAGACAGTGGAGCAGCGAGCTGTTGTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp ATGGAGAACTGTCTCTTCAAGCGCTGTGGTATGTCATaGCGTCCACCCCCAGGATGGATCATGGCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: MENCLFKRCGMS*RPPPGWIMAAK
Trigger: CTTGGCAGCCATGATCCATCCTGGGGGTGGACGCAATGACATACCACAGCGCTTGAAGAGACAGTTCTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TCTGGAGTGCGGCTTCCGCCTCTTCTAGGGCTGGCTTaGCTGCCTCTAATTTCTCTTCTGCGATGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: SGVRLPPLLGLA*LPLISLLRWLC
Trigger: ACAAAGCCATCGCAGAAGAGAAATTAGAGGCAGCAAAGCCAGCCCTAGAAGAGGCGGAAGCCGCACTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CATGCTCCCATAAGAGCAACGTCTTTCCCTTCGGTCACGAACACCTaGGGCTTTTTCATCTTTCCGGAGGCAGGATTCACCCCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: HAPIRATSFPSVTNT*GFFIFPEAGFTPPE
Trigger: CTCAGGAGGGGTGAATCCTGCCTCCGGAAAGATGAAAAAGCCCAAGGTGTTCGTGACCGAAGGGAAAGACGTTGCTCTTATGGGAGCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp ATCTTTCTCTTGGACAACAGCTCGCTGCTCCACTGTCTAACCCCCTaGGGGACACTGATGATGCATTCCACGGCTTTGTTCAGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: IFLLDNSSLLHCLTP*GTLMMHSTALFSVC
Trigger: GCAGACGCTGAACAAAGCCGTGGAATGCATCATCAGTGTCCCCAAGGGGGTTAGACAGTGGAGCAGCGAGCTGTTGTCCAAGAGAAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp CAGCCTGAGGAGTTCGTCTGTGTCTTTGATGACCTCTaGAGTGATGTTCAGCATGCCCTGCCAGATCCTGGA +
Preference number: 6 (lower is better)
Translates to: QPEEFVCVFDDL*SDVQHALPDPG
Trigger: TCCAGGATCTGGCAGGGCATGCTGAACATCACTTCAGAGGTCATCAAAGACACAGACGAACTCCTCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp TGGTGCAGCCTTTGTCCACGTCAATTTTCACCGCATTaGCCCTCCTCTGAAACAGCAGCAGCACACAGTCCA +
Preference number: 6 (lower is better)
Translates to: WCSLCPRQFSPH*PSSETAAAHSP
Trigger: TGGACTGTGTGCTGCTGCTGTTTCAGAGGAGGGTCAATGCGGTGAAAATTGACGTGGACAAAGGCTGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CCTTCTCCTTCAGACTGTTCTGTGCACCTGACAAGATaGCCACAAAGCCTTCCAGAGAGCTCAGGAACTCCT +
Preference number: 6 (lower is better)
Translates to: PSPSDCSVHLTR*PQSLPESSGTP
Trigger: AGGAGTTCCTGAGCTCTCTGGAAGGCTTTGTGGGCATCTTGTCAGGTGCACAGAACAGTCTGAAGGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CGTAACTTAAAGGTCTCATTGCCCACATCCAGACTGTaGCCAGTGAGAGCAGTGATCCTCTGCCAGTGTCGT +
Preference number: 6 (lower is better)
Translates to: RNLKVSLPTSRL*PVRAVILCQCR
Trigger: ACGACACTGGCAGAGGATCACTGCTCTCACTGGGCACAGTCTGGATGTGGGCAATGAGACCTTTAAGTTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TTGCTGCTCCCAGGGTGCGCAGAACTGACAGAATGTTaGGGAGACCAAAGTCATAGTGAACCTGCTTCGAGA +
Preference number: 6 (lower is better)
Translates to: LLLPGCAELTEC*GDQSHSEPASR
Trigger: TCTCGAAGCAGGTTCACTATGACTTTGGTCTCCGCAACATTCTGTCAGTTCTGCGCACCCTGGGAGCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CTAGGCCCCAGGGTCATCATGCCGTGCCTCACCCTCTaGGTTTCAAACAACTGGATGACTTTCAGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: LGPRVIMPCLTL*VSNNWMTFSFQ
Trigger: TTGGAAACTGAAAGTCATCCAGTTGTTTGAAACGCAGAGGGTGAGGCACGGCATGATGACCCTGGGGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TCAGTCAGGGTGCTACGGACAAGGCTGAGTACCCTCTaGATCCTGTCAATCTCCTGCCTGAGGAAAATGTTC +
Preference number: 6 (lower is better)
Translates to: SVRVLRTRLSTL*ILSISCLRKMF
Trigger: GAACATTTTCCTCAGGCAGGAGATTGACAGGATGCAGAGGGTACTCAGCCTTGTCCGTAGCACCCTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CTCCCGGTGGATGTTCTCAGGCGTAATGGCTTTGGATaGGTCAGACCTGATGAAGAACACACATGCTCCCAT +
Preference number: 6 (lower is better)
Translates to: LPVDVLRRNGFG*VRPDEEHTCSH
Trigger: ATGGGAGCATGTGTGTTCTTCATCAGGTCTGACCCATCCAAAGCCATTACGCCTGAGAACATCCACCGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TCTGCCGTGTCTAACGTGTTAAAGCTCACCTCCCGGTaGATGTTCTCAGGCGTAATGGCTTTGGATGGGTCA +
Preference number: 6 (lower is better)
Translates to: SAVSNVLKLTSR*MFSGVMALDGS
Trigger: TGACCCATCCAAAGCCATTACGCCTGAGAACATCCACCGGGAGGTGAGCTTTAACACGTTAGACACGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CCCTGTGGTAGAGGACCTCAAACTCCAAGAGGACCTTaGCTATCCTGTTATAGCTGCGGATCACAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: PCGRGPQTPRGP*LSCYSCGSQVW
Trigger: CCAAACCTGTGATCCGCAGCTATAACAGGATAGCCAAGGTCCTCTTGGAGTTTGAGGTCCTCTACCACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TCTTGCAGTTTGGAGCCATGGGGATCCGGTCGCCATTaGCCAGAGTCAGGGTTTTATTATCATCCAGCACAG +
Preference number: 6 (lower is better)
Translates to: SCSLEPWGSGRH*PESGFYYHPAQ
Trigger: CTGTGCTGGATGATAATAAAACCCTGACTCTGGCCAATGGCGACCGGATCCCCATGGCTCCAAACTGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CTCACCTCCCGGTGGATGTTCTCAGGCGTAATGGCTTaGGATGGGTCAGACCTGATGAAGAACACACATGCT +
Preference number: 6 (lower is better)
Translates to: LTSRWMFSGVMA*DGSDLMKNTHA
Trigger: AGCATGTGTGTTCTTCATCAGGTCTGACCCATCCAAAGCCATTACGCCTGAGAACATCCACCGGGAGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TGCTGTATGTCTTCCAGGGCAGGAGTCATAGCGATGTaGGGAATGGCCAGAGTGACACTTGCCCGGAAAATG +
Preference number: 6 (lower is better)
Translates to: CCMSSRAGVIAM*GMARVTLARKM
Trigger: CATTTTCCGGGCAAGTGTCACTCTGGCCATTCCCAACATCGCTATGACTCCTGCCCTGGAAGACATACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp AGGGCCGCCATTGCTATCCTAATATCATCCAGGTCCTaGATCGGCCGGCTCAGTTTCTTCTGGGATTCTTCG +
Preference number: 6 (lower is better)
Translates to: RAAIAILISSRS*IGRLSFFWDSS
Trigger: CGAAGAATCCCAGAAGAAACTGAGCCGGCCGATCAAGGACCTGGATGATATTAGGATAGCAATGGCGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CATTGCCCTCTGCCATCACAGGCTTGTCCAATTCAATaGTCTCGCCCTCCCGAGAGGAGATTGACAGAATCC +
Preference number: 6 (lower is better)
Translates to: HCPLPSQACPIQ*SRPPERRLTES
Trigger: GGATTCTGTCAATCTCCTCTCGGGAGGGCGAGACAATTGAATTGGACAAGCCTGTGATGGCAGAGGGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp GCCACCTGCAGCTCCTTCTCTTTTCCTGCCAGTTCTTaGCTCAAGGCTGCCACCGATTCTGACGCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: ATCSSFSFPASS*LKAATDSDASF
Trigger: AAAAGAAGCGTCAGAATCGGTGGCAGCCTTGAGCAAAGAACTGGCAGGAAAAGAGAAGGAGCTGCAGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TTCTTTCTTGCAGTTGCTGTCAATGGCAGAGAGCTGGCCCCGGCATaGAAGGAAGATGCCAAGGCCTCAGAATGCCCTTCTCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: FFLAVAVNGRELAPA*KEDAKASECPSLLP
Trigger: AGGAAGAAGAGAAGGGCATTCTGAGGCCTTGGCATCTTCCTTCAATGCCGGGGCCAGCTCTCTGCCATTGACAGCAACTGCAAGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CTGGGCTTTCTGCAGGTCCTGCATGGCCAGGATGTGACGATTCTCTaGCACTATCAAGTTGGCCTTCAGAGGGAGCACCTCCTTGTTTAT +
Preference number: 6 (lower is better)
Translates to: LGFLQVLHGQDVTIL*HYQVGLQREHLLVY
Trigger: ATAAACAAGGAGGTGCTCCCTCTGAAGGCCAACTTGATAGTGCAAGAGAATCGTCACATCCTGGCCATGCAGGACCTGCAGAAAGCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CATCTTCCACTTCTGGTTTGTTCAGGTCCAAACAGGAAGCTACAATaGCAAACAGATAGTCATGCCGCCCATCCAGACGGGCCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: HLPLLVCSGPNRKLQ*QTDSHAAHPDGPSW
Trigger: CCAAGAGGGCCCGTCTGGATGGGCGGCATGACTATCTGTTTGCAATTGTAGCTTCCTGTTTGGACCTGAACAAACCAGAAGTGGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TCCATACTTGTTAAGGAGGGCATAGGATTCCTCAATAGGTCCCACTaGGAAGTCGGTGGAGATCTGCTGCTCCCTTATCTCCTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: SILVKEGIGFLNRSH*EVGGDLLLPYLLQG
Trigger: GCCCTGAAGGAGATAAGGGAGCAGCAGATCTCCACCGACTTCCAAGTGGGACCTATTGAGGAATCCTATGCCCTCCTTAACAAGTATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CAGTTGAATATGGAGAACTGTCTCTTCAAGCGCTGTGGTATGTCATaGCGTCCACCCCCAGGATGGATCATGGCTGCCAAGAACTGGATG +
Preference number: 6 (lower is better)
Translates to: QLNMENCLFKRCGMS*RPPPGWIMAAKNWM
Trigger: CATCCAGTTCTTGGCAGCCATGATCCATCCTGGGGGTGGACGCAATGACATACCACAGCGCTTGAAGAGACAGTTCTCCATATTCAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp TTCATCCCGAGCAAAGAGGTTGGAGACCTCGCCCGATaGCAGGACATTGTTCATGTACTCCAGAAACGACTC +
Preference number: 6 (lower is better)
Translates to: FIPSKEVGDLAR*QDIVHVLQKRL
Trigger: GAGTCGTTTCTGGAGTACATGAACAATGTCCTGTCATCGGGCGAGGTCTCCAACCTCTTTGCTCGGGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GGCTTTGGATGGGTCAGACCTGATGAAGAACACACATaGTCCCATAAGAGCAACGTCTTTCCCTTCGGTCAC +
Preference number: 6 (lower is better)
Translates to: GFGWVRPDEEHT*SHKSNVFPFGH
Trigger: GTGACCGAAGGGAAAGACGTTGCTCTTATGGGAGCATGTGTGTTCTTCATCAGGTCTGACCCATCCAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp AGAGTGACACTTGCCCGGAAAATGGGCAGATGGTTCTaGTTTGCCTTAGACGCATCATTACTGTCCCGGAAG +
Preference number: 6 (lower is better)
Translates to: RVTLARKMGRWF*FALDASLLSRK
Trigger: CTTCCGGGACAGTAATGATGCGTCTAAGGCAAAGCAGAACCATCTGCCCATTTTCCGGGCAAGTGTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp AGTCATAGCGATGTTGGGAATGGCCAGAGTGACACTTaGCCGGAAAATGGGCAGATGGTTCTGCTTTGCCTT +
Preference number: 6 (lower is better)
Translates to: SHSDVGNGQSDT*PENGQMVLLCL
Trigger: AAGGCAAAGCAGAACCATCTGCCCATTTTCCGGGCAAGTGTCACTCTGGCCATTCCCAACATCGCTATGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp ACACTGATGATGCATTCCACGGCTTTGTTCAGCGTCTaGTGTATGTCTTCCAGGGCAGGAGTCATAGCGATG +
Preference number: 6 (lower is better)
Translates to: TLMMHSTALFSV*CMSSRAGVIAM
Trigger: CATCGCTATGACTCCTGCCCTGGAAGACATACAGCAGACGCTGAACAAAGCCGTGGAATGCATCATCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp AAGCCTGCCGCTGGCTTCCTGGGGCTTCAATCCACTTaGCATCGGACCATTCAAATCATAGTCCAGGTAAAA +
Preference number: 6 (lower is better)
Translates to: KPAAGFLGLQST*HRTIQIIVQVK
Trigger: TTTTACCTGGACTATGATTTGAATGGTCCGATGGCAAGTGGATTGAAGCCCCAGGAAGCCAGCGGCAGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TATGTCATTGCGTCCACCCCCAGGATGGATCATGGCTaGCAAGAACTGGATGTCCACAATGCTAGTGAACTC +
Preference number: 6 (lower is better)
Translates to: YVIASTPRMDHG*QELDVHNASEL
Trigger: GAGTTCACTAGCATTGTGGACATCCAGTTCTTGGCAGCCATGATCCATCCTGGGGGTGGACGCAATGACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GGCTTTGTCCTTGGAGATGCTGTCGACAATGGCCTGTaGTTTGTCCTTTACCTTCTGCACCTCAGCTTTGAC +
Preference number: 6 (lower is better)
Translates to: GFVLGDAVDNGL*FVLYLLHLSFD
Trigger: GTCAAAGCTGAGGTGCAGAAGGTAAAGGACAAAGCACAGGCCATTGTCGACAGCATCTCCAAGGACAAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp AGCCAGCAGCACATCCCCTACGAGCCGTTTAGTTTGTaGAGCAAACTCTTTACTTTGTTCCGTCCATCGCTC +
Preference number: 6 (lower is better)
Translates to: SQQHIPYEPFSL*SKLFTLFRPSL
Trigger: GAGCGATGGACGGAACAAAGTAAAGAGTTTGCTGCACAAACTAAACGGCTCGTAGGGGATGTGCTGCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CAAAGAGCCATGCTACTCATTTCCTCCAGGATGGCGTaGATGCGGAACTCAATCAAGTCATTGACCCGGTCA +
Preference number: 6 (lower is better)
Translates to: QRAMLLISSRMA*MRNSIKSLTRS
Trigger: TGACCGGGTCAATGACTTGATTGAGTTCCGCATCCACGCCATCCTGGAGGAAATGAGTAGCATGGCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AAGGCTTCCAGTACCTCCATCTTGAACTCCAGGTTCTaGATGCTGAACCGATACAGGTCCGGGAAAGTCTCT +
Preference number: 6 (lower is better)
Translates to: KASSTSILNSRF*MLNRYRSGKVS
Trigger: AGAGACTTTCCCGGACCTGTATCGGTTCAGCATCCAGAACCTGGAGTTCAAGATGGAGGTACTGGAAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ATATTCTGGGGTGGTGTCAGGTGGGTACACATATTCTaGGGTACACAGGCTCCAATGCCTCCAAGTACCGTT +
Preference number: 6 (lower is better)
Translates to: IFWGGVRWVHIF*GTQAPMPPSTV
Trigger: AACGGTACTTGGAGGCATTGGAGCCTGTGTACCCCAGAATATGTGTACCCACCTGACACCACCCCAGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ACTCAGACGCTCTCGCAGGTGGTTAAGGGATGCGATTaGCTCATAAAGCTTTGGCATTTCAGCATCAGCCTC +
Preference number: 6 (lower is better)
Translates to: TQTLSQVVKGCD*LIKLWHFSISL
Trigger: GAGGCTGATGCTGAAATGCCAAAGCTTTATGAGCCAATCGCATCCCTTAACCACCTGCGAGAGCGTCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AGGAACAAAGTCCGGCTACATTCCCACAGACGCGCTTaGCCGTCTCGATGTTGTAGTCGGACATTTCAAAGT +
Preference number: 6 (lower is better)
Translates to: RNKVRLHSHRRA*PSRCCSRTFQS
Trigger: ACTTTGAAATGTCCGACTACAACATCGAGACGGCCAAGCGCGTCTGTGGGAATGTAGCCGGACTTTGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CCATTCTGGATGGACAGGTCATCATTTGGAAGGCCTTaGAGGTTCCATTCGCTGATAGTAGGGGCATCGATC +
Preference number: 6 (lower is better)
Translates to: PFWMDRSSFGRP*RFHSLIVGASI
Trigger: GATCGATGCCCCTACTATCAGCGAATGGAACCTCCAAGGCCTTCCAAATGATGACCTGTCCATCCAGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ACAGCTTCCTCGCATGGACCTCCTGGCCCTGGCCCATaGACACATAGCGTGTTTCTATTTTTAGTCTCTTTC +
Preference number: 6 (lower is better)
Translates to: TASSHGPPGPGP*THSVFLFLVSF
Trigger: GAAAGAGACTAAAAATAGAAACACGCTATGTGTCCATGGGCCAGGGCCAGGAGGTCCATGCGAGGAAGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ACGTCCATTAGCTCATCCAGGAAGTCAAGTCCCAGGTaGCAGTTCTGTAGAAGTACCCATCCTCCATTTGCC +
Preference number: 6 (lower is better)
Translates to: TSISSSRKSSPR*QFCRSTHPPFA
Trigger: GGCAAATGGAGGATGGGTACTTCTACAGAACTGCCACCTGGGACTTGACTTCCTGGATGAGCTAATGGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp GTCCACAGCAGCAATGTAGTTCAAGTCTGTTCGAACTaGCTTCTTGTAGATGGGGCAGCAGTACAACCGAGG +
Preference number: 6 (lower is better)
Translates to: VHSSNVVQVCSN*LLVDGAAVQPR
Trigger: CCTCGGTTGTACTGCTGCCCCATCTACAAGAAGCCAGTTCGAACAGACTTGAACTACATTGCTGCTGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp GTTAAGGAGGGCATAGGATTCCTCAATAGGTCCCACTaGGAAGTCGGTGGAGATCTGCTGCTCCCTTATCTC +
Preference number: 6 (lower is better)
Translates to: VKEGIGFLNRSH*EVGGDLLLPYL
Trigger: GAGATAAGGGAGCAGCAGATCTCCACCGACTTCCAAGTGGGACCTATTGAGGAATCCTATGCCCTCCTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CGCCCAAGTCCTCGGAAATCCATCTGGTCCGAGCAGTaGAAAACTACAACATATTTCCCAAGACATCGGCCC +
Preference number: 6 (lower is better)
Translates to: RPSPRKSIWSEQ*KTTTYFPRHRP
Trigger: GGGCCGATGTCTTGGGAAATATGTTGTAGTTTTCAACTGCTCGGACCAGATGGATTTCCGAGGACTTGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp ATCTTGCAGTTTGGAGCCATGGGGATCCGGTCGCCATaGGCCAGAGTCAGGGTTTTATTATCATCCAGCACA +
Preference number: 6 (lower is better)
Translates to: ILQFGAMGIRSP*ARVRVLLSSST
Trigger: TGTGCTGGATGATAATAAAACCCTGACTCTGGCCAATGGCGACCGGATCCCCATGGCTCCAAACTGCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CGTAGCCAGCAGCACATCCCCTACGAGCCGTTTAGTTaGTGCAGCAAACTCTTTACTTTGTTCCGTCCATCG +
Preference number: 6 (lower is better)
Translates to: RSQQHIPYEPFS*CSKLFTLFRPS
Trigger: CGATGGACGGAACAAAGTAAAGAGTTTGCTGCACAAACTAAACGGCTCGTAGGGGATGTGCTGCTGGCTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp GTGTTAAAGCTCACCTCCCGGTGGATGTTCTCAGGCGTAATGGCTTaGGATGGGTCAGACCTGATGAAGAACACACATGCTCCCATAAGA +
Preference number: 6 (lower is better)
Translates to: VLKLTSRWMFSGVMA*DGSDLMKNTHAPIR
Trigger: TCTTATGGGAGCATGTGTGTTCTTCATCAGGTCTGACCCATCCAAAGCCATTACGCCTGAGAACATCCACCGGGAGGTGAGCTTTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp GCAGGATTGGTATCCCTGCTTGAGCTTAATCACAGCTGCTATTTTTaGCATAACAATCTCCTGAGGCTGGCTCCAGATGGTGGCAGTCCC +
Preference number: 6 (lower is better)
Translates to: AGLVSLLELNHSCYF*HNNLLRLAPDGGSP
Trigger: GGGACTGCCACCATCTGGAGCCAGCCTCAGGAGATTGTTATGCAAAAAATAGCAGCTGTGATTAAGCTCAAGCAGGGATACCAATCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp AGACTTCCACATTGCCCTCTGCCATCACAGGCTTGTCCAATTCAATaGTCTCGCCCTCCCGAGAGGAGATTGACAGAATCCGATCATAGA +
Preference number: 6 (lower is better)
Translates to: RLPHCPLPSQACPIQ*SRPPERRLTESDHR
Trigger: TCTATGATCGGATTCTGTCAATCTCCTCTCGGGAGGGCGAGACAATTGAATTGGACAAGCCTGTGATGGCAGAGGGCAATGTGGAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp AGAGAATTAAGCCAGACTTCCACATTGCCCTCTGCCATCACAGGCTaGTCCAATTCAATTGTCTCGCCCTCCCGAGAGGAGATTGACAGA +
Preference number: 6 (lower is better)
Translates to: RELSQTSTLPSAITG*SNSIVSPSREEIDR
Trigger: TCTGTCAATCTCCTCTCGGGAGGGCGAGACAATTGAATTGGACAAGCCTGTGATGGCAGAGGGCAATGTGGAAGTCTGGCTTAATTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp GTCCGGGAAAGTCTCTGCATACAGCTGTCGAAGGATTTCAGCCTCTaGAGGAGACCGTCTCTTGAGAAAACCCTCAAGAATAGGACTCCA +
Preference number: 6 (lower is better)
Translates to: VRESLCIQLSKDFSL*RRPSLEKTLKNRTP
Trigger: TGGAGTCCTATTCTTGAGGGTTTTCTCAAGAGACGGTCTCCTCAAGAGGCTGAAATCCTTCGACAGCTGTATGCAGAGACTTTCCCGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CACATCCCCTACGAGCCGTTTAGTTTGTGCAGCAAACTCTTTACTTaGTTCCGTCCATCGCTCCTTTTCACCTGCCAAGCCACTGATGAG +
Preference number: 6 (lower is better)
Translates to: HIPYEPFSLCSKLFT*FRPSLLFTCQATDE
Trigger: CTCATCAGTGGCTTGGCAGGTGAAAAGGAGCGATGGACGGAACAAAGTAAAGAGTTTGCTGCACAAACTAAACGGCTCGTAGGGGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp AGCCATTCAAAGTCCGTAGGGCTCTTGACGTGCATGTaGCACAGGTCATCAAAGATGTCCCTTTGGTGCACA +
Preference number: 6 (lower is better)
Translates to: SHSKSVGLLTCM*HRSSKMSLWCT
Trigger: TGTGCACCAAAGGGACATCTTTGATGACCTGTGTCACATGCACGTCAAGAGCCCTACGGACTTTGAATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp GCCCAAGTCCTCGGAAATCCATCTGGTCCGAGCAGTTaGAAACTACAACATATTTCCCAAGACATCGGCCCA +
Preference number: 6 (lower is better)
Translates to: AQVLGNPSGPSS*KLQHISQDIGP
Trigger: TGGGCCGATGTCTTGGGAAATATGTTGTAGTTTTCAACTGCTCGGACCAGATGGATTTCCGAGGACTTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GCTTCATCCACTCTAGCCAGGTGTGGAAACATCAACTaGTCGATGGCAGGAGGCATTTTCAACTTCACTCTC +
Preference number: 6 (lower is better)
Translates to: ASSTLARCGNIN*SMAGGIFNFTL
Trigger: GAGAGTGAAGTTGAAAATGCCTCCTGCCATCGAGCAGTTGATGTTTCCACACCTGGCTAGAGTGGATGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CAGCAGAGAATTAAGCCAGACTTCCACATTGCCCTCTaGCATCACAGGCTTGTCCAATTCAATTGTCTCGCC +
Preference number: 6 (lower is better)
Translates to: QQRIKPDFHIAL*HHRLVQFNCLA
Trigger: GGCGAGACAATTGAATTGGACAAGCCTGTGATGGCAGAGGGCAATGTGGAAGTCTGGCTTAATTCTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TCTTTGATGACCTCTGAAGTGATGTTCAGCATGCCCTaGCAGATCCTGGAGAGGTCTCGAAGGTTGAACACA +
Preference number: 6 (lower is better)
Translates to: SLMTSEVMFSMP*QILERSRRLNT
Trigger: TGTGTTCAACCTTCGAGACCTCTCCAGGATCTGGCAGGGCATGCTGAACATCACTTCAGAGGTCATCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GAACACACTCAGACGCTCTCGCAGGTGGTTAAGGGATaGGATTGGCTCATAAAGCTTTGGCATTTCAGCATC +
Preference number: 6 (lower is better)
Translates to: EHTQTLSQVVKG*DWLIKLWHFSI
Trigger: GATGCTGAAATGCCAAAGCTTTATGAGCCAATCGCATCCCTTAACCACCTGCGAGAGCGTCTGAGTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TTCCTGGTCACTTTCAAAAGAGCATCTGTGTTCTGGTaGTTAAAGTGGGAGAGCAGCTCACGGGCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: FLVTFKRASVFW*LKWESSSRASS
Trigger: AGAGGAAGCCCGTGAGCTGCTCTCCCACTTTAACCACCAGAACACAGATGCTCTTTTGAAAGTGACCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CACAAGGATAGATCCATATTCTGGGGTGGTGTCAGGTaGGTACACATATTCTGGGGTACACAGGCTCCAATG +
Preference number: 6 (lower is better)
Translates to: HKDRSIFWGGVR*VHIFWGTQAPM
Trigger: CATTGGAGCCTGTGTACCCCAGAATATGTGTACCCACCTGACACCACCCCAGAATATGGATCTATCCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TCGAAGGTTGAACACATAGTGGAATTTCGCAGGCGTTaGGAGCATCTTCAGTTTGGTCATCTGCCACAGACG +
Preference number: 6 (lower is better)
Translates to: SKVEHIVEFRRR*EHLQFGHLPQT
Trigger: CGTCTGTGGCAGATGACCAAACTGAAGATGCTCCCAACGCCTGCGAAATTCCACTATGTGTTCAACCTTCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CAGGTGGTTAAGGGATGCGATTGGCTCATAAAGCTTTaGCATTTCAGCATCAGCCTCCTCAGGTGTTTCACC +
Preference number: 6 (lower is better)
Translates to: QVVKGCDWLIKL*HFSISLLRCFT
Trigger: GGTGAAACACCTGAGGAGGCTGATGCTGAAATGCCAAAGCTTTATGAGCCAATCGCATCCCTTAACCACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CTTCTGGTTTGTTCAGGTCCAAACAGGAAGCTACAATaGCAAACAGATAGTCATGCCGCCCATCCAGACGGG +
Preference number: 6 (lower is better)
Translates to: LLVCSGPNRKLQ*QTDSHAAHPDG
Trigger: CCCGTCTGGATGGGCGGCATGACTATCTGTTTGCAATTGTAGCTTCCTGTTTGGACCTGAACAAACCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp ATAAGAGCAACGTCTTTCCCTTCGGTCACGAACACCTaGGGCTTTTTCATCTTTCCGGAGGCAGGATTCACC +
Preference number: 6 (lower is better)
Translates to: IRATSFPSVTNT*GFFIFPEAGFT
Trigger: GGTGAATCCTGCCTCCGGAAAGATGAAAAAGCCCAAGGTGTTCGTGACCGAAGGGAAAGACGTTGCTCTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp GCCCGTGTCATGATCTTCACCCAAGACTTATCTATATaGGAAAAGCGCTTGGCTTCCTTGGGCAGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: ARVMIFTQDLSI*EKRLASLGSCL
Trigger: CAAGCAGCTGCCCAAGGAAGCCAAGCGCTTTTCCAATATAGATAAGTCTTGGGTGAAGATCATGACACGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TTGTCCTTGGAGATGCTGTCGACAATGGCCTGTGCTTaGTCCTTTACCTTCTGCACCTCAGCTTTGACCTTC +
Preference number: 6 (lower is better)
Translates to: LSLEMLSTMACA*SFTFCTSALTF
Trigger: GAAGGTCAAAGCTGAGGTGCAGAAGGTAAAGGACAAAGCACAGGCCATTGTCGACAGCATCTCCAAGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TCCATTCTGGATGGACAGGTCATCATTTGGAAGGCCTaGGAGGTTCCATTCGCTGATAGTAGGGGCATCGAT +
Preference number: 6 (lower is better)
Translates to: SILDGQVIIWKA*EVPFADSRGID
Trigger: ATCGATGCCCCTACTATCAGCGAATGGAACCTCCAAGGCCTTCCAAATGATGACCTGTCCATCCAGAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CATCGGACCATTCAAATCATAGTCCAGGTAAAACTGCTGGCAGTCTaGGAGGAACACCTCCACTGTGCTGATGAGCTCTTTCCGGAAACT +
Preference number: 6 (lower is better)
Translates to: HRTIQIIVQVKLLAV*EEHLHCADELFPET
Trigger: AGTTTCCGGAAAGAGCTCATCAGCACAGTGGAGGTGTTCCTCCAAGACTGCCAGCAGTTTTACCTGGACTATGATTTGAATGGTCCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp CCTGAAAAGAGCCCATGCACTGGACCAATTCCTTCTTaGTCTCCGCTGTGCAGTCAATGGTATAGGATGAGA +
Preference number: 6 (lower is better)
Translates to: PEKSPCTGPIPS*SPLCSQWYRMR
Trigger: TCTCATCCTATACCATTGACTGCACAGCGGAGATCAAGAAGGAATTGGTCCAGTGCATGGGCTCTTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GCTTCCTCCACAAGGGAGCTTTTAAAATGGAGTAGCTaGGCACCACTCACACAGAGATCCTTTGTCATTTGG +
Preference number: 6 (lower is better)
Translates to: ASSTRELLKWSS*APLTQRSFVIW
Trigger: CCAAATGACAAAGGATCTCTGTGTGAGTGGTGCGCAGCTACTCCATTTTAAAAGCTCCCTTGTGGAGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GACACTTGCCCGGAAAATGGGCAGATGGTTCTGCTTTaGCTTAGACGCATCATTACTGTCCCGGAAGTTAAT +
Preference number: 6 (lower is better)
Translates to: DTCPENGQMVLL*LRRIITVPEVN
Trigger: ATTAACTTCCGGGACAGTAATGATGCGTCTAAGGCAAAGCAGAACCATCTGCCCATTTTCCGGGCAAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp ATGCTAAAGCGGTCAGCTATCACACGTTTACACTCATaGTTCCACAGCCTGAGGAGTTCGTCTGTGTCTTTG +
Preference number: 6 (lower is better)
Translates to: MLKRSAITRLHS*FHSLRSSSVSL
Trigger: CAAAGACACAGACGAACTCCTCAGGCTGTGGAAGCATGAGTGTAAACGTGTGATAGCTGACCGCTTTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TCCTTTAAAACCGTGTCTGCTTTCTCATTGGCCACCTaGAGCTCCTTCTCTTTTCCTGCCAGTTCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: SFKTVSAFSLAT*SSFSFPASSLL
Trigger: GAGCAAAGAACTGGCAGGAAAAGAGAAGGAGCTGCAGGTGGCCAATGAGAAAGCAGACACGGTTTTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TCATCCAGGTCCTTGATCGGCCGGCTCAGTTTCTTCTaGGATTCTTCGACAACTGTGAGAATGTTTTCCATC +
Preference number: 6 (lower is better)
Translates to: SSRSLIGRLSFF*DSSTTVRMFSI
Trigger: GATGGAAAACATTCTCACAGTTGTCGAAGAATCCCAGAAGAAACTGAGCCGGCCGATCAAGGACCTGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TTCCACCATGGCGTTACTGGCCATGTACTCCAGCAATaGACAGCACTCACTGAAGTCATCAATGGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: FHHGVTGHVLQQ*TALTEVINGLL
Trigger: AAGAAGACCATTGATGACTTCAGTGAGTGCTGTCCATTGCTGGAGTACATGGCCAGTAACGCCATGGTGGAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AGCCTTTTCTTCTCCAAGTATCCTGTGAGCGACTTCTaGCAGATTTCCAACTGGTCCAGTAAGTGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: SLFFSKYPVSDF*QISNWSSKCGS
Trigger: ACTGCCACACTTACTGGACCAGTTGGAAATCTGCCAGAAGTCGCTCACAGGATACTTGGAGAAGAAAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CTGTCATCAATTTCAAAGACTCCTGCCAGGAAGGCATaGTGCAGCCTTTGTCCACGTCAATTTTCACCGCAT +
Preference number: 6 (lower is better)
Translates to: LSSISKTPARKA*CSLCPRQFSPH
Trigger: ATGCGGTGAAAATTGACGTGGACAAAGGCTGCACCATGCCTTCCTGGCAGGAGTCTTTGAAATTGATGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AGTGAAGTCGATGATGGAGGTCCGAGCACTTATTTCTaGGGTATAGGCTGGATTCGGCAGTTTGGTAGTGAT +
Preference number: 6 (lower is better)
Translates to: SEVDDGGPSTYF*GIGWIRQFGSD
Trigger: ATCACTACCAAACTGCCGAATCCAGCCTATACCCCAGAAATAAGTGCTCGGACCTCCATCATCGACTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CAGTGGGGTCTGCCATTGGAAACCCAGGAGGTGAACTaGCAGTTTCTTTCTAGAAGTTCAGTAAACCAGAAG +
Preference number: 6 (lower is better)
Translates to: QWGLPLETQEVN*QFLSRSSVNQK
Trigger: CTTCTGGTTTACTGAACTTCTAGAAAGAAACTGCCAGTTCACCTCCTGGGTTTCCAATGGCAGACCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp GGAGCTTCCATGATATTTCGTAACTTAAAGGTCTCATaGCCCACATCCAGACTGTGCCCAGTGAGAGCAGTG +
Preference number: 6 (lower is better)
Translates to: GASMIFRNLKVS*PTSRLCPVRAV
Trigger: CACTGCTCTCACTGGGCACAGTCTGGATGTGGGCAATGAGACCTTTAAGTTACGAAATATCATGGAAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TGTCAATGTTATGAGGTTCAAAAACAATCTTGCAGTTaGGAGCCATGGGGATCCGGTCGCCATTGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: CQCYEVQKQSCS*EPWGSGRHWPE
Trigger: CTCTGGCCAATGGCGACCGGATCCCCATGGCTCCAAACTGCAAGATTGTTTTTGAACCTCATAACATTGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp GCAAAGAGGTTGGAGACCTCGCCCGATGACAGGACATaGTTCATGTACTCCAGAAACGACTCCTCTTTAATC +
Preference number: 6 (lower is better)
Translates to: AKRLETSPDDRT*FMYSRNDSSLI
Trigger: GATTAAAGAGGAGTCGTTTCTGGAGTACATGAACAATGTCCTGTCATCGGGCGAGGTCTCCAACCTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TACGAGCCGTTTAGTTTGTGCAGCAAACTCTTTACTTaGTTCCGTCCATCGCTCCTTTTCACCTGCCAAGCC +
Preference number: 6 (lower is better)
Translates to: YEPFSLCSKLFT*FRPSLLFTCQA
Trigger: GGCTTGGCAGGTGAAAAGGAGCGATGGACGGAACAAAGTAAAGAGTTTGCTGCACAAACTAAACGGCTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp AGCTTCTGTGTCACCTCCTCAGCTGTCTTTTTGGTGTaGCTCAGCACAATGATGAGACTCTCATCTTCCACC +
Preference number: 6 (lower is better)
Translates to: SFCVTSSAVFLV*LSTMMRLSSST
Trigger: GGTGGAAGATGAGAGTCTCATCATTGTGCTGAGCAACACCAAAAAGACAGCTGAGGAGGTGACACAGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp AAGAAACCTGTCATCCAAAAGCAGTGGGGTCTGCCATaGGAAACCCAGGAGGTGAACTGGCAGTTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: KKPVIQKQWGLP*ETQEVNWQFLS
Trigger: AGAAAGAAACTGCCAGTTCACCTCCTGGGTTTCCAATGGCAGACCCCACTGCTTTTGGATGACAGGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TTTAGCAGAGGAGCTTCCATGATATTTCGTAACTTAAAGGTCTCATaGCCCACATCCAGACTGTGCCCAGTGAGAGCAGTGATCCTCTGC +
Preference number: 6 (lower is better)
Translates to: FSRGASMIFRNLKVS*PTSRLCPVRAVILC
Trigger: GCAGAGGATCACTGCTCTCACTGGGCACAGTCTGGATGTGGGCAATGAGACCTTTAAGTTACGAAATATCATGGAAGCTCCTCTGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TTGAATATCCGCCCAAGTCCTCGGAAATCCATCTGGTCCGAGCAGTaGAAAACTACAACATATTTCCCAAGACATCGGCCCATGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LNIRPSPRKSIWSEQ*KTTTYFPRHRPMSL
Trigger: CAAGGACATGGGCCGATGTCTTGGGAAATATGTTGTAGTTTTCAACTGCTCGGACCAGATGGATTTCCGAGGACTTGGGCGGATATTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp GAGAAGCATTGTCAATGTTATGAGGTTCAAAAACAATCTTGCAGTTaGGAGCCATGGGGATCCGGTCGCCATTGGCCAGAGTCAGGGTTT +
Preference number: 6 (lower is better)
Translates to: EKHCQCYEVQKQSCS*EPWGSGRHWPESGF
Trigger: AAACCCTGACTCTGGCCAATGGCGACCGGATCCCCATGGCTCCAAACTGCAAGATTGTTTTTGAACCTCATAACATTGACAATGCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TTGGCTGTCCCTTGCTCACCAATTAACAGCACAGCCTTGCCTTGTTaGGCAATGGTTTTAATTAGGAAGTCGGTCCGCACATTGTCCACA +
Preference number: 6 (lower is better)
Translates to: LAVPCSPINSTALPC*AMVLIRKSVRTLST
Trigger: TGTGGACAATGTGCGGACCGACTTCCTAATTAAAACCATTGCCAAACAAGGCAAGGCTGTGCTGTTAATTGGTGAGCAAGGGACAGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TCATCCCGAGCAAAGAGGTTGGAGACCTCGCCCGATGACAGGACATaGTTCATGTACTCCAGAAACGACTCCTCTTTAATCTCATTGTCT +
Preference number: 6 (lower is better)
Translates to: SSRAKRLETSPDDRT*FMYSRNDSSLISLS
Trigger: AGACAATGAGATTAAAGAGGAGTCGTTTCTGGAGTACATGAACAATGTCCTGTCATCGGGCGAGGTCTCCAACCTCTTTGCTCGGGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp GACAATAATTCCATTCTGGATGGACAGGTCATCATTTGGAAGGCCTaGGAGGTTCCATTCGCTGATAGTAGGGGCATCGATCAGCATCTC +
Preference number: 6 (lower is better)
Translates to: DNNSILDGQVIIWKA*EVPFADSRGIDQHL
Trigger: GAGATGCTGATCGATGCCCCTACTATCAGCGAATGGAACCTCCAAGGCCTTCCAAATGATGACCTGTCCATCCAGAATGGAATTATTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TCTTCCAACCCCTCTATTTTGGAATCTTGCAGGACTGAGTATGTCTaGAAGGTAGTGAAGATGTCCATTATCTTGGCCAGACGTCGGTGG +
Preference number: 6 (lower is better)
Translates to: SSNPSILESCRTEYV*KVVKMSIILARRRW
Trigger: CCACCGACGTCTGGCCAAGATAATGGACATCTTCACTACCTTCAAGACATACTCAGTCCTGCAAGATTCCAAAATAGAGGGGTTGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp ATGACTGTTTTGGCTGTCCCTTGCTCACCAATTAACAGCACAGCCTaGCCTTGTTTGGCAATGGTTTTAATTAGGAAGTCGGTCCGCACA +
Preference number: 6 (lower is better)
Translates to: MTVLAVPCSPINSTA*PCLAMVLIRKSVRT
Trigger: TGTGCGGACCGACTTCCTAATTAAAACCATTGCCAAACAAGGCAAGGCTGTGCTGTTAATTGGTGAGCAAGGGACAGCCAAAACAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp CTGCTTCTGCTCCCTCCACATCCTGATAGTAAAACATaGGATGACGGAGTCCACCAACAGCAAAAAGCTGAT +
Preference number: 6 (lower is better)
Translates to: LLLLPPHPDSKT*DDGVHQQQKAD
Trigger: ATCAGCTTTTTGCTGTTGGTGGACTCCGTCATCTCATGTTTTACTATCAGGATGTGGAGGGAGCAGAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp TCATTACTGTCCCGGAAGTTAATCATGTGGGAGAAGTaGATGCGTCTGCGAATGGCCTCAAGTGTATTCCTG +
Preference number: 6 (lower is better)
Translates to: SLLSRKLIMWEK*MRLRMASSVFL
Trigger: CAGGAATACACTTGAGGCCATTCGCAGACGCATTCACTTCTCCCACATGATTAACTTCCGGGACAGTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp GTCTCTGCATACAGCTGTCGAAGGATTTCAGCCTCTTaGGGAGACCGTCTCTTGAGAAAACCCTCAAGAATA +
Preference number: 6 (lower is better)
Translates to: VSAYSCRRISAS*GDRLLRKPSRI
Trigger: TATTCTTGAGGGTTTTCTCAAGAGACGGTCTCCTCAAGAGGCTGAAATCCTTCGACAGCTGTATGCAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TTGTTGTCCCACTCATTGATCACTTGCCTCAGCTTTTaGTCAATGTCTCTCTCCTTCACGGCACTGATGCAA +
Preference number: 6 (lower is better)
Translates to: LLSHSLITCLSF*SMSLSFTALMQ
Trigger: TTGCATCAGTGCCGTGAAGGAGAGAGACATTGAGCAAAAGCTGAGGCAAGTGATCAATGAGTGGGACAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ATGTCACTGAAATTCTTTTTGAACATGTCCCGCTTCTaGAAGAGGGCAGCTGCAAACGGTGACACAGGTAGA +
Preference number: 6 (lower is better)
Translates to: MSLKFFLNMSRF*KRAAANGDTGR
Trigger: TCTACCTGTGTCACCGTTTGCAGCTGCCCTCTTCCAGAAGCGGGACATGTTCAAAAAGAATTTCAGTGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TCATTGACTGCTTCCTCCACAAGGGAGCTTTTAAAATaGAGTAGCTGCGCACCACTCACACAGAGATCCTTT +
Preference number: 6 (lower is better)
Translates to: SLTASSTRELLK*SSCAPLTQRSF
Trigger: AAAGGATCTCTGTGTGAGTGGTGCGCAGCTACTCCATTTTAAAAGCTCCCTTGTGGAGGAAGCAGTCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AGTGAATGCGTCTGCGAATGGCCTCAAGTGTATTCCTaGTCACTTTCAAAAGAGCATCTGTGTTCTGGTGGT +
Preference number: 6 (lower is better)
Translates to: SECVCEWPQVYS*SLSKEHLCSGG
Trigger: ACCACCAGAACACAGATGCTCTTTTGAAAGTGACCAGGAATACACTTGAGGCCATTCGCAGACGCATTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AAGGCACTGCACCCATTTTTGAATCTGGGCTTTGAATaGCATATTGTACCTGTTGCTAAGGAGAGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: KALHPFLNLGFE*HIVPVAKERAQ
Trigger: CTGGGCTCTCTCCTTAGCAACAGGTACAATATGCCATTCAAAGCCCAGATTCAAAAATGGGTGCAGTGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ATCATGCCGTGCCTCACCCTCTGCGTTTCAAACAACTaGATGACTTTCAGTTTCCAAGGAGGGTGGTTAATT +
Preference number: 6 (lower is better)
Translates to: IMPCLTLCVSNN*MTFSFQGGWLI
Trigger: AATTAACCACCCTCCTTGGAAACTGAAAGTCATCCAGTTGTTTGAAACGCAGAGGGTGAGGCACGGCATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ATTGTCCACATTTGGCACAAGGATAGATCCATATTCTaGGGTGGTGTCAGGTGGGTACACATATTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: IVHIWHKDRSIF*GGVRWVHIFWG
Trigger: ACCCCAGAATATGTGTACCCACCTGACACCACCCCAGAATATGGATCTATCCTTGTGCCAAATGTGGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CGTAGCTCTCTATTGTCCTCTGAAACATCACTGGGGTaGTCGCCGAAGAAAAGTTCAGATTCTTCACCATGT +
Preference number: 6 (lower is better)
Translates to: RSSLLSSETSLG*SPKKSSDSSPC
Trigger: ACATGGTGAAGAATCTGAACTTTTCTTCGGCGACCACCCCAGTGATGTTTCAGAGGACAATAGAGAGCTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ATCCACGTAGCTCTCTATTGTCCTCTGAAACATCACTaGGGTGGTCGCCGAAGAAAAGTTCAGATTCTTCAC +
Preference number: 6 (lower is better)
Translates to: IHVALYCPLKHH*GGRRRKVQILH
Trigger: GTGAAGAATCTGAACTTTTCTTCGGCGACCACCCCAGTGATGTTTCAGAGGACAATAGAGAGCTACGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp TGTAGTTCAAGTCTGTTCGAACTGGCTTCTTGTAGATaGGGCAGCAGTACAACCGAGGATCTCTTGCAGTAT +
Preference number: 6 (lower is better)
Translates to: CSSSLFELASCR*GSSTTEDLLQY
Trigger: ATACTGCAAGAGATCCTCGGTTGTACTGCTGCCCCATCTACAAGAAGCCAGTTCGAACAGACTTGAACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp AGTCTCTGCATACAGCTGTCGAAGGATTTCAGCCTCTaGAGGAGACCGTCTCTTGAGAAAACCCTCAAGAAT +
Preference number: 6 (lower is better)
Translates to: SLCIQLSKDFSL*RRPSLEKTLKN
Trigger: ATTCTTGAGGGTTTTCTCAAGAGACGGTCTCCTCAAGAGGCTGAAATCCTTCGACAGCTGTATGCAGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CCTTGCTCACCAATTAACAGCACAGCCTTGCCTTGTTaGGCAATGGTTTTAATTAGGAAGTCGGTCCGCACA +
Preference number: 6 (lower is better)
Translates to: PCSPINSTALPC*AMVLIRKSVRT
Trigger: TGTGCGGACCGACTTCCTAATTAAAACCATTGCCAAACAAGGCAAGGCTGTGCTGTTAATTGGTGAGCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp ATTGTGACTTCCTTTAAAACCGTGTCTGCTTTCTCATaGGCCACCTGCAGCTCCTTCTCTTTTCCTGCCAGT +
Preference number: 6 (lower is better)
Translates to: IVTSFKTVSAFS*ATCSSFSFPAS
Trigger: ACTGGCAGGAAAAGAGAAGGAGCTGCAGGTGGCCAATGAGAAAGCAGACACGGTTTTAAAGGAAGTCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TTGCCTTGTTTGGCAATGGTTTTAATTAGGAAGTCGGTCCGCACATaGTCCACATTTGGCACAAGGATAGATCCATATTCTGGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: LPCLAMVLIRKSVRT*STFGTRIDPYSGVV
Trigger: CACCACCCCAGAATATGGATCTATCCTTGTGCCAAATGTGGACAATGTGCGGACCGACTTCCTAATTAAAACCATTGCCAAACAAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TGGAGGTTCCATTCGCTGATAGTAGGGGCATCGATCAGCATCTCGTaGAGATTTAGACCATTCCCAAACGGGATTTTACGAGCTTTCATT +
Preference number: 6 (lower is better)
Translates to: WRFHSLIVGASISIS*RFRPFPNGILRAFI
Trigger: AATGAAAGCTCGTAAAATCCCGTTTGGGAATGGTCTAAATCTCAACGAGATGCTGATCGATGCCCCTACTATCAGCGAATGGAACCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp GTCCAATTCAATTGTCTCGCCCTCCCGAGAGGAGATTaGCAGAATCCGATCATAGATCTTGTCATGGAACTT +
Preference number: 6 (lower is better)
Translates to: VQFNCLALPRGD*QNPIIDLVMEL
Trigger: AAGTTCCATGACAAGATCTATGATCGGATTCTGTCAATCTCCTCTCGGGAGGGCGAGACAATTGAATTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GTCGCCATGTCTTCCAACCCCTCTATTTTGGAATCTTaGAGGACTGAGTATGTCTTGAAGGTAGTGAAGATG +
Preference number: 6 (lower is better)
Translates to: VAMSSNPSILES*RTEYVLKVVKM
Trigger: CATCTTCACTACCTTCAAGACATACTCAGTCCTGCAAGATTCCAAAATAGAGGGGTTGGAAGACATGGCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CTCCCATGTCTTTTCCAAGTCCAGGATAACTCCCTCTaGATAGTTTTCTCCCATGGAGTCCATGATGTACTT +
Preference number: 6 (lower is better)
Translates to: LPCLFQVQDNSL*IVFSHGVHDVL
Trigger: AAGTACATCATGGACTCCATGGGAGAAAACTATGCAGAGGGAGTTATCCTGGACTTGGAAAAGACATGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp CCTCTTTATCTCAAGAAGCTGAGGATACGGTGTAACTaGCAAACCAAAAAGTTCCTCTCCTCCAGTGTAGGT +
Preference number: 6 (lower is better)
Translates to: PLYLKKLRIRCN*QTKKFLSSSVG
Trigger: ACCTACACTGGAGGAGAGGAACTTTTTGGTTTGCCAGTTACACCGTATCCTCAGCTTCTTGAGATAAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp GCGTCTGAAGCAGTCGAGAGATTTATCGTAGGCATTTaGAAGCGGCTCCTCTTCTGGGTTTTCTTTATCAAA +
Preference number: 6 (lower is better)
Translates to: ASEAVERFIVGI*KRLLFWVFFIK
Trigger: TTTGATAAAGAAAACCCAGAAGAGGAGCCGCTTCCAAATGCCTACGATAAATCTCTCGACTGCTTCAGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AATCTCCTGCCTGAGGAAAATGTTCATGGGCTGGAATaGTCCCATCTTCTGCAATCTCTCCTTCACTTCAAA +
Preference number: 6 (lower is better)
Translates to: NLLPEENVHGLE*SHLLQSLLHFK
Trigger: TTTGAAGTGAAGGAGAGATTGCAGAAGATGGGACCATTCCAGCCCATGAACATTTTCCTCAGGCAGGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TGTCCAATTCAATTGTCTCGCCCTCCCGAGAGGAGATaGACAGAATCCGATCATAGATCTTGTCATGGAACT +
Preference number: 6 (lower is better)
Translates to: CPIQLSRPPERR*TESDHRSCHGT
Trigger: AGTTCCATGACAAGATCTATGATCGGATTCTGTCAATCTCCTCTCGGGAGGGCGAGACAATTGAATTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp ATCTTGTCCATGGAAGCATCTGAAGGCAAGGTACAGTaGAATATGGAGAACTGTCTCTTCAAGCGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: ILSMEASEGKVQ*NMENCLFKRCG
Trigger: ACCACAGCGCTTGAAGAGACAGTTCTCCATATTCAACTGTACCTTGCCTTCAGATGCTTCCATGGACAAGAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp ACAATGTCCTGGTACTTAGTCGCCATGTCTTCCAACCCCTCTATTTaGGAATCTTGCAGGACTGAGTATGTCTTGAAGGTAGTGAAGATG +
Preference number: 6 (lower is better)
Translates to: TMSWYLVAMSSNPSI*ESCRTEYVLKVVKM
Trigger: CATCTTCACTACCTTCAAGACATACTCAGTCCTGCAAGATTCCAAAATAGAGGGGTTGGAAGACATGGCGACTAAGTACCAGGACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp ACACCAAAGATCTTGTCCATGGAAGCATCTGAAGGCAAGGTACAGTaGAATATGGAGAACTGTCTCTTCAAGCGCTGTGGTATGTCATTG +
Preference number: 6 (lower is better)
Translates to: TPKILSMEASEGKVQ*NMENCLFKRCGMSL
Trigger: CAATGACATACCACAGCGCTTGAAGAGACAGTTCTCCATATTCAACTGTACCTTGCCTTCAGATGCTTCCATGGACAAGATCTTTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TTGGTGACTTCATTGCAAAGAACCATATTGTCCAAAGCCCATCCTTaGTTGGCTCGAGTTATTTCCTGTCGCATCGCAGTTAAGAATCCC +
Preference number: 6 (lower is better)
Translates to: LVTSLQRTILSKAHP*LARVISCRIAVKNP
Trigger: GGGATTCTTAACTGCGATGCGACAGGAAATAACTCGAGCCAACAAAGGATGGGCTTTGGACAATATGGTTCTTTGCAATGAAGTCACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp GCCTTGAGTCTGAGGGTCAATGAGCAAAGGATAGCGTaGTGCTTTTGTGACAATAATTCCATTCTGGATGGA +
Preference number: 6 (lower is better)
Translates to: ALSLRVNEQRIA*CFCDNNSILDG
Trigger: TCCATCCAGAATGGAATTATTGTCACAAAAGCATCACGCTATCCTTTGCTCATTGACCCTCAGACTCAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp ATCCTTCTTTTGTTTGCAGTTACATCCTCCAAGAGATaGGTTCGTTCTTTCTCCAGTTCCTGCTTCTCCGTG +
Preference number: 6 (lower is better)
Translates to: ILLLFAVTSSKR*VRSFSSSCFSV
Trigger: CACGGAGAAGCAGGAACTGGAGAAAGAACGAACTCATCTCTTGGAGGATGTAACTGCAAACAAAAGAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TCTATCACTTCTTCATTGATCGTGTCTTTGGGGAACTaGTGTAGGTTCTGGAGAAAGTTTCCTGCTGTCATC +
Preference number: 6 (lower is better)
Translates to: SITSSLIVSLGN*CRFWRKFPAVI
Trigger: GATGACAGCAGGAAACTTTCTCCAGAACCTACAGCAGTTCCCCAAAGACACGATCAATGAAGAAGTGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GTGATTTTGAATGAACTGCACCGTGGCATTGAAGTCTaGTTGGTTAAATTCGTAAGGGATATTCCACCCCAG +
Preference number: 6 (lower is better)
Translates to: VILNELHRGIEV*LVKFVRDIPPQ
Trigger: CTGGGGTGGAATATCCCTTACGAATTTAACCAAGCAGACTTCAATGCCACGGTGCAGTTCATTCAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp ATGACAAGTCTGTCAGTGCAGCCTAAAAACTCATTCTaGTATATGAAAGCCACGTCGGTGATGTGGATCATC +
Preference number: 6 (lower is better)
Translates to: MTSLSVQPKNSF*YMKATSVMWII
Trigger: GATGATCCACATCACCGACGTGGCTTTCATATACCAGAATGAGTTTTTAGGCTGCACTGACAGACTTGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TGGTACTTAGTCGCCATGTCTTCCAACCCCTCTATTTaGGAATCTTGCAGGACTGAGTATGTCTTGAAGGTA +
Preference number: 6 (lower is better)
Translates to: WYLVAMSSNPSI*ESCRTEYVLKV
Trigger: TACCTTCAAGACATACTCAGTCCTGCAAGATTCCAAAATAGAGGGGTTGGAAGACATGGCGACTAAGTACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp ATTTTGAATGAACTGCACCGTGGCATTGAAGTCTGCTaGGTTAAATTCGTAAGGGATATTCCACCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: ILNELHRGIEVC*VKFVRDIPPQR
Trigger: CCTCTGGGGTGGAATATCCCTTACGAATTTAACCAAGCAGACTTCAATGCCACGGTGCAGTTCATTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TCATTGCAAAGAACCATATTGTCCAAAGCCCATCCTTaGTTGGCTCGAGTTATTTCCTGTCGCATCGCAGTT +
Preference number: 6 (lower is better)
Translates to: SLQRTILSKAHP*LARVISCRIAV
Trigger: AACTGCGATGCGACAGGAAATAACTCGAGCCAACAAAGGATGGGCTTTGGACAATATGGTTCTTTGCAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CTGCTGTACAGAGGGTCACAACATTTCTCCAGTGTGTACAAATACTaGACATTGTCTTTTGCTTCATTGGCTGCGTCAGTGATCCTAATG +
Preference number: 6 (lower is better)
Translates to: LLYRGSQHFSSVYKY*TLSFASLAASVILM
Trigger: CATTAGGATCACTGACGCAGCCAATGAAGCAAAAGACAATGTCAAGTATTTGTACACACTGGAGAAATGTTGTGACCCTCTGTACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CGGGTCTTAAAGCCACTAAATGTTAATGTTTTGTTGTCCCACTCATaGATCACTTGCCTCAGCTTTTGCTCAATGTCTCTCTCCTTCACG +
Preference number: 6 (lower is better)
Translates to: RVLKPLNVNVLLSHS*ITCLSFCSMSLSFT
Trigger: CGTGAAGGAGAGAGACATTGAGCAAAAGCTGAGGCAAGTGATCAATGAGTGGGACAACAAAACATTAACATTTAGTGGCTTTAAGACCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp AGGAGGAGTTCTCCACGGGTCTTAAAGCCACTAAATGTTAATGTTTaGTTGTCCCACTCATTGATCACTTGCCTCAGCTTTTGCTCAATG +
Preference number: 6 (lower is better)
Translates to: RRSSPRVLKPLNVNV*LSHSLITCLSFCSM
Trigger: CATTGAGCAAAAGCTGAGGCAAGTGATCAATGAGTGGGACAACAAAACATTAACATTTAGTGGCTTTAAGACCCGTGGAGAACTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp TCCAATGAGGCACCACCTTTAATGAGAGTGAGAAACTCCTCATGTTaGACTAGGTTCCTCTGGATGTCAATCTTTAGGGTGAGCAACAAA +
Preference number: 6 (lower is better)
Translates to: SNEAPPLMRVRNSSC*TRFLWMSIFRVSNK
Trigger: TTTGTTGCTCACCCTAAAGATTGACATCCAGAGGAACCTAGTCAAACATGAGGAGTTTCTCACTCTCATTAAAGGTGGTGCCTCATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp GTAGGAGGAGCAGAAATGTCGTCCTTCATAAATTTGGTGACTTCATaGCAAAGAACCATATTGTCCAAAGCCCATCCTTTGTTGGCTCGA +
Preference number: 6 (lower is better)
Translates to: VGGAEMSSFINLVTS*QRTILSKAHPLLAR
Trigger: TCGAGCCAACAAAGGATGGGCTTTGGACAATATGGTTCTTTGCAATGAAGTCACCAAATTTATGAAGGACGACATTTCTGCTCCTCCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp TGTAGAAGATTCAGCTGCCTCTTTATCTCAAGAAGCTaGGGATACGGTGTAACTGGCAAACCAAAAAGTTCC +
Preference number: 6 (lower is better)
Translates to: CRRFSCLFISRS*GYGVTGKPKSS
Trigger: GGAACTTTTTGGTTTGCCAGTTACACCGTATCCTCAGCTTCTTGAGATAAAGAGGCAGCTGAATCTTCTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp GTTTTGAACGGTCATCCAGTTCTCAATGATGTCTGTTaGGTTGGAAAGGCACTGCACCCATTTTTGAATCTG +
Preference number: 6 (lower is better)
Translates to: VLNGHPVLNDVC*VGKALHPFLNL
Trigger: CAGATTCAAAAATGGGTGCAGTGCCTTTCCAACTCAACAGACATCATTGAGAACTGGATGACCGTTCAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TCCAACACAACACTGAACCACATTTGGTATCTCATGTaGCCGTGTCATGATCTTCACCCAAGACTTATCTAT +
Preference number: 6 (lower is better)
Translates to: SNTTLNHIWYLM*PCHDLHPRLIY
Trigger: ATAGATAAGTCTTGGGTGAAGATCATGACACGGGCACATGAGATACCAAATGTGGTTCAGTGTTGTGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp CACAAAATAAGCATCAACTCCACAATCCACTACAGGTaGTTTCTCTTCACCAAACTCCTCCTCTACCAAACT +
Preference number: 6 (lower is better)
Translates to: HKISINSTIHYR*FLFTKLLLYQT
Trigger: AGTTTGGTAGAGGAGGAGTTTGGTGAAGAGAAAGCACCTGTAGTGGATTGTGGAGTTGATGCTTATTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AATCTGATTACCCTCAAGAAGAGCATCTTCCACTTCTaGTTTGTTCAGGTCCAAACAGGAAGCTACAATTGC +
Preference number: 6 (lower is better)
Translates to: NLITLKKSIFHF*FVQVQTGSYNC
Trigger: GCAATTGTAGCTTCCTGTTTGGACCTGAACAAACCAGAAGTGGAAGATGCTCTTCTTGAGGGTAATCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp GATGGAGGTCCGAGCACTTATTTCTGGGGTATAGGCTaGATTCGGCAGTTTGGTAGTGATATAAAGTTTAAA +
Preference number: 6 (lower is better)
Translates to: DGGPSTYFWGIG*IRQFGSDIKFK
Trigger: TTTAAACTTTATATCACTACCAAACTGCCGAATCCAGCCTATACCCCAGAAATAAGTGCTCGGACCTCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AGAGTGAGAAACTCCTCATGTTTGACTAGGTTCCTCTaGATGTCAATCTTTAGGGTGAGCAACAAAGTGAAC +
Preference number: 6 (lower is better)
Translates to: RVRNSSCLTRFL*MSIFRVSNKVN
Trigger: GTTCACTTTGTTGCTCACCCTAAAGATTGACATCCAGAGGAACCTAGTCAAACATGAGGAGTTTCTCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CCCTCTATTTTGGAATCTTGCAGGACTGAGTATGTCTaGAAGGTAGTGAAGATGTCCATTATCTTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: PSILESCRTEYV*KVVKMSIILAR
Trigger: TCTGGCCAAGATAATGGACATCTTCACTACCTTCAAGACATACTCAGTCCTGCAAGATTCCAAAATAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp CCACGGGTCTTAAAGCCACTAAATGTTAATGTTTTGTaGTCCCACTCATTGATCACTTGCCTCAGCTTTTGC +
Preference number: 6 (lower is better)
Translates to: PRVLKPLNVNVL*SHSLITCLSFC
Trigger: GCAAAAGCTGAGGCAAGTGATCAATGAGTGGGACAACAAAACATTAACATTTAGTGGCTTTAAGACCCGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp AGGAGTTCTCCACGGGTCTTAAAGCCACTAAATGTTAATGTTTTGTaGTCCCACTCATTGATCACTTGCCTCAGCTTTTGCTCAATGTCT +
Preference number: 6 (lower is better)
Translates to: RSSPRVLKPLNVNVL*SHSLITCLSFCSMS
Trigger: AGACATTGAGCAAAAGCTGAGGCAAGTGATCAATGAGTGGGACAACAAAACATTAACATTTAGTGGCTTTAAGACCCGTGGAGAACTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp ACTGAACCACATTTGGTATCTCATGTGCCCGTGTCATaGTCTTCACCCAAGACTTATCTATATTGGAAAAGC +
Preference number: 6 (lower is better)
Translates to: TEPHLVSHVPVS*SSPKTYLYWKS
Trigger: GCTTTTCCAATATAGATAAGTCTTGGGTGAAGATCATGACACGGGCACATGAGATACCAAATGTGGTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp ATCTCGATCAGCATGTTCAGTAGCTCTAGGAAGGCCTaGTTGGTCTTCTGCATGATTTTCTTATCAAACTTG +
Preference number: 6 (lower is better)
Translates to: ISISMFSSSRKA*LVFCMIFLSNL
Trigger: CAAGTTTGATAAGAAAATCATGCAGAAGACCAATCAGGCCTTCCTAGAGCTACTGAACATGCTGATCGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp AATCCTGGACTCAAACTCAGGAAGCAAAGGGTTTTGTaGAATAAAGGTCATGATGGTGTCTTCTTTCTCCTT +
Preference number: 6 (lower is better)
Translates to: NPGLKLRKQRVL*NKGHDGVFFLL
Trigger: AAGGAGAAAGAAGACACCATCATGACCTTTATTGCACAAAACCCTTTGCTTCCTGAGTTTGAGTCCAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp TTATGCTCCTTTTTACACGTGAGAATAATGGAGATTTaGTGGGCTGCAACTGACAGAACTGGTAGATCGATA +
Preference number: 6 (lower is better)
Translates to: LCSFLHVRIMEI*WAATDRTGRSI
Trigger: TATCGATCTACCAGTTCTGTCAGTTGCAGCCCAGCAAATCTCCATTATTCTCACGTGTAAAAAGGAGCATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AGTAATTCTGGGTTTGCACTGGGATGGGTAAGTTTATaGATGCTATCTCCAGAGTTTCTTGCAGCTCATTTT +
Preference number: 6 (lower is better)
Translates to: SNSGFALGWVSL*MLSPEFLAAHF
Trigger: AAAATGAGCTGCAAGAAACTCTGGAGATAGCATCCATAAACTTACCCATCCCAGTGCAAACCCAGAATTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AGATTTATCGTAGGCATTTGGAAGCGGCTCCTCTTCTaGGTTTTCTTTATCAAACCAAACTCTCCACATCTT +
Preference number: 6 (lower is better)
Translates to: RFIVGIWKRLLF*VFFIKPNSPHL
Trigger: AAGATGTGGAGAGTTTGGTTTGATAAAGAAAACCCAGAAGAGGAGCCGCTTCCAAATGCCTACGATAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp AAGAATCCTGGACTCAAACTCAGGAAGCAAAGGGTTTaGTGCAATAAAGGTCATGATGGTGTCTTCTTTCTC +
Preference number: 6 (lower is better)
Translates to: KNPGLKLRKQRV*CNKGHDGVFFL
Trigger: GAGAAAGAAGACACCATCATGACCTTTATTGCACAAAACCCTTTGCTTCCTGAGTTTGAGTCCAGGATTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp GAAATTCAATCAATTGGAAACCGGGTTCTTGAATATTaGCAGCTGCCTGGCGAATCACAAGATGTAATGAGG +
Preference number: 6 (lower is better)
Translates to: EIQSIGNRVLEY*QLPGESQDVMR
Trigger: CCTCATTACATCTTGTGATTCGCCAGGCAGCTGCAAATATTCAAGAACCCGGTTTCCAATTGATTGAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp GGAAGAAAGAAATTCAATCAATTGGAAACCGGGTTCTaGAATATTTGCAGCTGCCTGGCGAATCACAAGATG +
Preference number: 6 (lower is better)
Translates to: GRKKFNQLETGF*NICSCLANHKM
Trigger: CATCTTGTGATTCGCCAGGCAGCTGCAAATATTCAAGAACCCGGTTTCCAATTGATTGAATTTCTTTCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp TTGGCAATGGTTTTAATTAGGAAGTCGGTCCGCACATaGTCCACATTTGGCACAAGGATAGATCCATATTCT +
Preference number: 6 (lower is better)
Translates to: LAMVLIRKSVRT*STFGTRIDPYS
Trigger: AGAATATGGATCTATCCTTGTGCCAAATGTGGACAATGTGCGGACCGACTTCCTAATTAAAACCATTGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp CATTTCTCCAGTGTGTACAAATACTTGACATTGTCTTTTGCTTCATaGGCTGCGTCAGTGATCCTAATGTCTGTATCTCTCCAAACCTTC +
Preference number: 6 (lower is better)
Translates to: HFSSVYKYLTLSFAS*AASVILMSVSLQTF
Trigger: GAAGGTTTGGAGAGATACAGACATTAGGATCACTGACGCAGCCAATGAAGCAAAAGACAATGTCAAGTATTTGTACACACTGGAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 90 bp AGGAAGAAAGAAATTCAATCAATTGGAAACCGGGTTCTTGAATATTaGCAGCTGCCTGGCGAATCACAAGATGTAATGAGGACTGTGACT +
Preference number: 6 (lower is better)
Translates to: RKKEIQSIGNRVLEY*QLPGESQDVMRTVT
Trigger: AGTCACAGTCCTCATTACATCTTGTGATTCGCCAGGCAGCTGCAAATATTCAAGAACCCGGTTTCCAATTGATTGAATTTCTTTCTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS GCA 72 bp GTACAAATACTTGACATTGTCTTTTGCTTCATTGGCTaGGTCAGTGATCCTAATGTCTGTATCTCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: VQILDIVFCFIG*VSDPNVCISPN
Trigger: GTTTGGAGAGATACAGACATTAGGATCACTGACGCAGCCAATGAAGCAAAAGACAATGTCAAGTATTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp AGTGTGTACAAATACTTGACATTGTCTTTTGCTTCATaGGCTGCGTCAGTGATCCTAATGTCTGTATCTCTC +
Preference number: 6 (lower is better)
Translates to: SVYKYLTLSFAS*AASVILMSVSL
Trigger: GAGAGATACAGACATTAGGATCACTGACGCAGCCAATGAAGCAAAAGACAATGTCAAGTATTTGTACACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CAA 72 bp AAGCCACTAAATGTTAATGTTTTGTTGTCCCACTCATaGATCACTTGCCTCAGCTTTTGCTCAATGTCTCTC +
Preference number: 6 (lower is better)
Translates to: KPLNVNVLLSHS*ITCLSFCSMSL
Trigger: GAGAGACATTGAGCAAAAGCTGAGGCAAGTGATCAATGAGTGGGACAACAAAACATTAACATTTAGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp CTGGCAAACCAAAAAGTTCCTCTCCTCCAGTGTAGGTaGTGTATTTACGATATATGTTATCGAATTGATTCT +
Preference number: 6 (lower is better)
Translates to: LANQKVPLLQCR*CIYDICYRIDS
Trigger: AGAATCAATTCGATAACATATATCGTAAATACATCACCTACACTGGAGGAGAGGAACTTTTTGGTTTGCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS TCA 72 bp ACCAAAGGGTATCTTGATAACTATTCACAGTCTCGATaGCATTGTTGTACAGGCTGTATATTTTCTGTAGAA +
Preference number: 6 (lower is better)
Translates to: TKGYLDNYSQSR*HCCTGCIFSVE
Trigger: TTCTACAGAAAATATACAGCCTGTACAACAATGTCATCGAGACTGTGAATAGTTATCAAGATACCCTTTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8
CDS CCA 72 bp AAATATTCTTATAGTAATTCTGGGTTTGCACTGGGATaGGTAAGTTTATGGATGCTATCTCCAGAGTTTCTT +
Preference number: 6 (lower is better)
Translates to: KYSYSNSGFALG*VSLWMLSPEFL
Trigger: AAGAAACTCTGGAGATAGCATCCATAAACTTACCCATCCCAGTGCAAACCCAGAATTACTATAAGAATATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000067048.8