RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052273

Ensembl transcript IDs: ENSMUST00000046993.4, ENSMUST00000208701.2, ENSMUST00000208910.2, ENSMUST00000209154.3, ENSMUST00000213149.2

Found 700 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTTCCAGCCCAGCTGGTGGGCCTCCATGTAGATCATCCCACACCTaGTCACGGTGGCGGGGGAGGCCTGCTCCAGATCTGCTGGCTCAA +
Preference number: 1 (lower is better)
Translates to: ASSPAGGPPCRSSHT*SRWRGRPAPDLLAQ
Trigger: TTGAGCCAGCAGATCTGGAGCAGGCCTCCCCCGCCACCGTGAGCAGGTGTGGGATGATCTACATGGAGGCCCACCAGCTGGGCTGGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp AGGGCCTGGTGGGTTCTGCATGGACTTCACCAGCGTGATGTCAGATaGGTTCAGGGTGTCGAGGGCAGCAAGGGCAGCCTCAAGTGCTGG +
Preference number: 1 (lower is better)
Translates to: RAWWVLHGLHQRDVR*VQGVEGSKGSLKCW
Trigger: CCAGCACTTGAGGCTGCCCTTGCTGCCCTCGACACCCTGAACCCATCTGACATCACGCTGGTGAAGTCCATGCAGAACCCACCAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp GGAAGCTTGGAGAGTATATCCTGGGCCAGCTCCTCAACCACTTCCTaGGGAGACTTCCCACTCCCTCCGGACTGTCTCGGCAGGGTCAGC +
Preference number: 1 (lower is better)
Translates to: GSLESISWASSSTTS*GDFPLPPDCLGRVS
Trigger: GCTGACCCTGCCGAGACAGTCCGGAGGGAGTGGGAAGTCTCCTCAGGAAGTGGTTGAGGAGCTGGCCCAGGATATACTCTCCAAGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp GGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTaGGAGATGGCAGCAGCAGCATTAGCCTCCTTCTCATCTGCCTGC +
Preference number: 1 (lower is better)
Translates to: GMASARSPSHSFLIA*EMAAAALASFSSAC
Trigger: GCAGGCAGATGAGAAGGAGGCTAATGCTGCTGCTGCCATCTCTCAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp CCTTCTGGGTCACAAAAAGCTGGGCACAGGTGGGGATCCATTTGGTaGGTAGAATATGACGCGCCTCCCGGCAGTGCTTCTGGACCACCT +
Preference number: 1 (lower is better)
Translates to: PSGSQKAGHRWGSIW*VEYDAPPGSASGPP
Trigger: AGGTGGTCCAGAAGCACTGCCGGGAGGCGCGTCATATTCTACTCACCAAATGGATCCCCACCTGTGCCCAGCTTTTTGTGACCCAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp ACAAAAAGCTGGGCACAGGTGGGGATCCATTTGGTGAGTAGAATATaGCGCGCCTCCCGGCAGTGCTTCTGGACCACCTCCTTGTACTCG +
Preference number: 1 (lower is better)
Translates to: TKSWAQVGIHLVSRI*RASRQCFWTTSLYS
Trigger: CGAGTACAAGGAGGTGGTCCAGAAGCACTGCCGGGAGGCGCGTCATATTCTACTCACCAAATGGATCCCCACCTGTGCCCAGCTTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp GGCACGTGGTCTCTGTGGGCTTTATCTCATAGCCAACAATGTCACTaGTCTGTTGCCAGTGCCGATCCTTCATCCCGGGGTTGCAGGCGA +
Preference number: 1 (lower is better)
Translates to: GTWSLWALSHSQQCH*SVASADPSSRGCRR
Trigger: TCGCCTGCAACCCCGGGATGAAGGATCGGCACTGGCAACAGATCAGTGACATTGTTGGCTATGAGATAAAGCCCACAGAGACCACGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp ACGCAAATGCTCTCCATAACCAGCTTGACAGGGCCTGGTGGGTTCTaGATGGACTTCACCAGCGTGATGTCAGATGGGTTCAGGGTGTCG +
Preference number: 1 (lower is better)
Translates to: TQMLSITSLTGPGGF*MDFTSVMSDGFRVS
Trigger: CGACACCCTGAACCCATCTGACATCACGCTGGTGAAGTCCATGCAGAACCCACCAGGCCCTGTCAAGCTGGTTATGGAGAGCATTTGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp TGCCCTGAAACAGGGGGACATCTTGAGCCAAGAACTTGGCCAGGTTaGCATCCAGCAAGGCCCGGAGCAACAGAACACTCTCATTCTCCT +
Preference number: 1 (lower is better)
Translates to: CPETGGHLEPRTWPG*HPARPGATEHSHSP
Trigger: AGGAGAATGAGAGTGTTCTGTTGCTCCGGGCCTTGCTGGATGTCAACCTGGCCAAGTTCTTGGCTCAAGATGTCCCCCTGTTTCAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp TTCTGTGTGCTCCTTAGTGAGACAGCGGGGCAAAGTATCCATGTATaGGTCCTTCAAGGGCTTCCAGCCCAGCTGGTGGGCCTCCATGTA +
Preference number: 1 (lower is better)
Translates to: FCVLLSETAGQSIHV*VLQGLPAQLVGLHV
Trigger: TACATGGAGGCCCACCAGCTGGGCTGGAAGCCCTTGAAGGACTCATACATGGATACTTTGCCCCGCTGTCTCACTAAGGAGCACACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp CCCCTTCATGACGCAAATGCTCTCCATAACCAGCTTGACAGGGCCTaGTGGGTTCTGCATGGACTTCACCAGCGTGATGTCAGATGGGTT +
Preference number: 1 (lower is better)
Translates to: PLHDANALHNQLDRA*WVLHGLHQRDVRWV
Trigger: AACCCATCTGACATCACGCTGGTGAAGTCCATGCAGAACCCACCAGGCCCTGTCAAGCTGGTTATGGAGAGCATTTGCGTCATGAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp AGATCTTGGAGTCGGTCTTCCACCAGCTTCAGCTCCGCCCGTTTCTaGTTCAGTTTTTGCATTTGGATCTCCAGCTTCCCCTCAGCCTCC +
Preference number: 1 (lower is better)
Translates to: RSWSRSSTSFSSARF*FSFCIWISSFPSAS
Trigger: GGAGGCTGAGGGGAAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTGGTGGAAGACCGACTCCAAGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp CCTTGCTGGCAGCTGCCCCAATGGGCTCCAGCTTATCAACAAATTTaGCGAATCCATATTCCAGCATATTGGCGAGGCACGTGGTCTCTG +
Preference number: 1 (lower is better)
Translates to: PCWQLPQWAPAYQQI*RIHIPAYWRGTWSL
Trigger: CAGAGACCACGTGCCTCGCCAATATGCTGGAATATGGATTCGGCAAATTTGTTGATAAGCTGGAGCCCATTGGGGCAGCTGCCAGCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp CCTCGCCCCACTGCTCAGCTTCCCTCGAACCAGCTCAACGATCTGTaGGATCTGGTCATTGCTCTTTTTCAGAAAGTCTGTAAGGGTGTC +
Preference number: 1 (lower is better)
Translates to: PRPTAQLPSNQLNDL*DLVIALFQKVCKGV
Trigger: GACACCCTTACAGACTTTCTGAAAAAGAGCAATGACCAGATCGCACAGATCGTTGAGCTGGTTCGAGGGAAGCTGAGCAGTGGGGCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp CTGCCCGAATGTTGTCATCAAGCTCCACGTCCTCCAGGAATTTGTTaGCCACCAACTCTAAGGCATCGGTTGGCCAGGACTGGAACCAAT +
Preference number: 1 (lower is better)
Translates to: LPECCHQAPRPPGIC*PPTLRHRLARTGTN
Trigger: ATTGGTTCCAGTCCTGGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGCTTGATGACAACATTCGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp CTTCATGACGCAAATGCTCTCCATAACCAGCTTGACAGGGCCTGGTaGGTTCTGCATGGACTTCACCAGCGTGATGTCAGATGGGTTCAG +
Preference number: 1 (lower is better)
Translates to: LHDANALHNQLDRAW*VLHGLHQRDVRWVQ
Trigger: CTGAACCCATCTGACATCACGCTGGTGAAGTCCATGCAGAACCCACCAGGCCCTGTCAAGCTGGTTATGGAGAGCATTTGCGTCATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp TCGTTCAGCCCCCGCTGGATGTCTTCCAATAGAACATTGGCTTCCTaGAGCTTCTCAGTCATTCTTGGCTGGTCAGCTGCCACCATTACC +
Preference number: 1 (lower is better)
Translates to: SFSPRWMSSNRTLAS*SFSVILGWSAATIT
Trigger: GGTAATGGTGGCAGCTGACCAGCCAAGAATGACTGAGAAGCTTCAGGAAGCCAATGTTCTATTGGAAGACATCCAGCGGGGGCTGAACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp CTGAGGCTGAAGGGCAGTGAGCTCTACCTGCATGACAGCCACTTGTaGAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAAGTAGCGGTT +
Preference number: 1 (lower is better)
Translates to: LRLKGSELYLHDSHL*RCKFQFLQACQVAV
Trigger: AACCGCTACTTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGGCTGTCATGCAGGTAGAGCTCACTGCCCTTCAGCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp AGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCCACCGTaGAGGCACCCAGGTAAGCCACGGTCCCAGAGGCTAGCAAAACAT +
Preference number: 1 (lower is better)
Translates to: RKPTIHFGIGPDNPP*RHPGKPRSQRLAKH
Trigger: ATGTTTTGCTAGCCTCTGGGACCGTGGCTTACCTGGGTGCCTTCACGGTGGATTATCGGGCCCAATGCCAAAATGAATGGTTGGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp ACATCATGGGATTCACTGTGTGCAAATGCTCCTCATTCCACTTCTTaGTACTCTGGTAGATGTTGTGCCAGGGCACAGGGGCCCGGATCA +
Preference number: 1 (lower is better)
Translates to: TSWDSLCANAPHSTS*YSGRCCARAQGPGS
Trigger: TGATCCGGGCCCCTGTGCCCTGGCACAACATCTACCAGAGTACCAAGAAGTGGAATGAGGAGCATTTGCACACAGTGAATCCCATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp GCTTGTTCCCGGAAAGCATTGGCCAGGACACCATCTGTCCACTCATaGCTCACAGCATCAAAGCAGCCATACAGTTGCCCCATTGTGATA +
Preference number: 1 (lower is better)
Translates to: ACSRKALARTPSVHS*LTASKQPYSCPIVI
Trigger: TATCACAATGGGGCAACTGTATGGCTGCTTTGATGCTGTGAGCCATGAGTGGACAGATGGTGTCCTGGCCAATGCTTTCCGGGAACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp GAGAAGGCAAGGTGGATGGGAGATGTTTGCACCACAAATTTGCAATaGAGCCGACTAAAGTCCAGACAGGGCTGCACAAGCCACGTGAAC +
Preference number: 1 (lower is better)
Translates to: EKARWMGDVCTTNLQ*SRLKSRQGCTSHVN
Trigger: GTTCACGTGGCTTGTGCAGCCCTGTCTGGACTTTAGTCGGCTCCATTGCAAATTTGTGGTGCAAACATCTCCCATCCACCTTGCCTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp AGTCAACCGATAGCTTCTTCACGCTCTCCTGGAAGTACTTGCACATaGAGACGACCTCTGCCCGAATGTTGTCATCAAGCTCCACGTCCT +
Preference number: 1 (lower is better)
Translates to: SQPIASSRSPGSTCT*RRPLPECCHQAPRP
Trigger: AGGACGTGGAGCTTGATGACAACATTCGGGCAGAGGTCGTCTCCATGTGCAAGTACTTCCAGGAGAGCGTGAAGAAGCTATCGGTTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp CTTGTAGCCAGGTGGCAGTTCTGTAGGACCACCCAGGTCCCTTCATaGATGGCTTTGTTGATCATATTGGCAGCAATAGGACCTTGGCCT +
Preference number: 1 (lower is better)
Translates to: LVARWQFCRTTQVPS*MALLIILAAIGPWP
Trigger: AGGCCAAGGTCCTATTGCTGCCAATATGATCAACAAAGCCATCCATGAAGGGACCTGGGTGGTCCTACAGAACTGCCACCTGGCTACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp AGCTGGTTGGTTTCCTGGTTGTCCTTGGTGATGTCAGCATTCTCATaGAGACCAAATACTTCAGGGTGTGCTGTGATGGGGAGGGTCCTG +
Preference number: 1 (lower is better)
Translates to: SWLVSWLSLVMSAFS*RPNTSGCAVMGRVL
Trigger: CAGGACCCTCCCCATCACAGCACACCCTGAAGTATTTGGTCTCCATGAGAATGCTGACATCACCAAGGACAACCAGGAAACCAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp GATGTCCCGGATTTCATCCAGCAGGGAGGAGTACAGCCGCATCATTaGGAAGGCAAGGTGGATGGGAGATGTTTGCACCACAAATTTGCA +
Preference number: 1 (lower is better)
Translates to: DVPDFIQQGGVQPHH*EGKVDGRCLHHKFA
Trigger: TGCAAATTTGTGGTGCAAACATCTCCCATCCACCTTGCCTTCTCAATGATGCGGCTGTACTCCTCCCTGCTGGATGAAATCCGGGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp GAAGAAGGACTGCCGGGCAGTCTCCATTGTGGGAATGATGAGGTCTaGTACCTTTGCATTCGCAGGAATAGTCTCCTCCTCCTTGGTGAT +
Preference number: 1 (lower is better)
Translates to: EEGLPGSLHCGNDEV*YLCIRRNSLLLLGD
Trigger: ATCACCAAGGAGGAGGAGACTATTCCTGCGAATGCAAAGGTATCAGACCTCATCATTCCCACAATGGAGACTGCCCGGCAGTCCTTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp CCTGAGGGTCAATCATCAAAGGCCAGCGCCTGGAATTGGACACAATaGTGCCATTGTCAACAGAGAAGGAGTCAACAGGAAGCCCTGCTA +
Preference number: 1 (lower is better)
Translates to: PEGQSSKASAWNWTQ*CHCQQRRSQQEALL
Trigger: TAGCAGGGCTTCCTGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTGGCCTTTGATGATTGACCCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp GCAGCACTCCTTGGAAGAGCTGGTTGGTTTCCTGGTTGTCCTTGGTaGTGTCAGCATTCTCATGGAGACCAAATACTTCAGGGTGTGCTG +
Preference number: 1 (lower is better)
Translates to: AALLGRAGWFPGCPW*CQHSHGDQILQGVL
Trigger: CAGCACACCCTGAAGTATTTGGTCTCCATGAGAATGCTGACATCACCAAGGACAACCAGGAAACCAACCAGCTCTTCCAAGGAGTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp CCTGCTGCAACATCACATCCATCTGTTGTTCTGGACTCATGGGTCTaGTTTCTGGGTGGGTCACACATAGAGCACCTTGCTTCCATCCAA +
Preference number: 1 (lower is better)
Translates to: PAATSHPSVVLDSWV*FLGGSHIEHLASIQ
Trigger: TTGGATGGAAGCAAGGTGCTCTATGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGATGGATGTGATGTTGCAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp GCTGACTTTCCAGCTCCAGCTCCAGCTCCAGCTGCTTGTAAACACTaGCAGTCAACAGCAGAGACACAGACTCAAGGGGTATGTATATAC +
Preference number: 1 (lower is better)
Translates to: ADFPAPAPAPAACKH*QSTAETQTQGVCIY
Trigger: GTATATACATACCCCTTGAGTCTGTGTCTCTGCTGTTGACTGGCAGTGTTTACAAGCAGCTGGAGCTGGAGCTGGAGCTGGAAAGTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp GAGTACAGCCGCATCATTGAGAAGGCAAGGTGGATGGGAGATGTTTaGACCACAAATTTGCAATGGAGCCGACTAAAGTCCAGACAGGGC +
Preference number: 1 (lower is better)
Translates to: EYSRIIEKARWMGDV*TTNLQWSRLKSRQG
Trigger: GCCCTGTCTGGACTTTAGTCGGCTCCATTGCAAATTTGTGGTGCAAACATCTCCCATCCACCTTGCCTTCTCAATGATGCGGCTGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp CATTCTCTGCTAAGCGCTTGGGCGCAGGCACATCGATCAAGGTCTTaGTCAACTTGTAGGTTGTCCTCCACATATTCCCTATCTCCTCTG +
Preference number: 1 (lower is better)
Translates to: HSLLSAWAQAHRSRS*STCRLSSTYSLSPL
Trigger: CAGAGGAGATAGGGAATATGTGGAGGACAACCTACAAGTTGACCAAGACCTTGATCGATGTGCCTGCGCCCAAGCGCTTAGCAGAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp ATTTGCGGTCATCAGTTATGGAAGACGCTTGTTCCCGGAAAGCATTaGCCAGGACACCATCTGTCCACTCATGGCTCACAGCATCAAAGC +
Preference number: 1 (lower is better)
Translates to: ICGHQLWKTLVPGKH*PGHHLSTHGSQHQS
Trigger: GCTTTGATGCTGTGAGCCATGAGTGGACAGATGGTGTCCTGGCCAATGCTTTCCGGGAACAAGCGTCTTCCATAACTGATGACCGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp TCATCCAGCAGGGAGGAGTACAGCCGCATCATTGAGAAGGCAAGGTaGATGGGAGATGTTTGCACCACAAATTTGCAATGGAGCCGACTA +
Preference number: 1 (lower is better)
Translates to: SSSREEYSRIIEKAR*MGDVCTTNLQWSRL
Trigger: TAGTCGGCTCCATTGCAAATTTGTGGTGCAAACATCTCCCATCCACCTTGCCTTCTCAATGATGCGGCTGTACTCCTCCCTGCTGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp TGGATCCAAAGCCGGATAAATTTTTCCAAATCCTGTAGGTGGGTGTaGGGACACAGCAGTACTCCCTGGATCACCCGTGAGAAATCCCGA +
Preference number: 1 (lower is better)
Translates to: WIQSRINFSKSCRWV*GHSSTPWITREKSR
Trigger: TCGGGATTTCTCACGGGTGATCCAGGGAGTACTGCTGTGTCCCCACACCCACCTACAGGATTTGGAAAAATTTATCCGGCTTTGGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp GAAGAAGAGGCTACGGATGTTGTCATCAGTTATCTTCCCGGTGGGTaGCAGGTGGATGAGCACCTTCTCCATGGTCTGCTTGAAGCAATT +
Preference number: 1 (lower is better)
Translates to: EEEATDVVISYLPGG*QVDEHLLHGLLEAI
Trigger: AATTGCTTCAAGCAGACCATGGAGAAGGTGCTCATCCACCTGTCACCCACCGGGAAGATAACTGATGACAACATCCGTAGCCTCTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp CAAACTTCAGCAGACCTGCCATTGGGTCTGCACCTGGAGACAGTATaGAAATCAATGGTACGCAGCAACTGGAATCACCGTAGGATCCCT +
Preference number: 1 (lower is better)
Translates to: QTSADLPLGLHLETV*KSMVRSNWNHRRIP
Trigger: AGGGATCCTACGGTGATTCCAGTTGCTGCGTACCATTGATTTTCATACTGTCTCCAGGTGCAGACCCAATGGCAGGTCTGCTGAAGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp GTGAATTCTGAGAACAGGGAGGGATCAGACCCTCTGAAAAACATCTaGCAGAGGTCAGGTCTCAGGATTCACTGGAGAGATGCCAATTGG +
Preference number: 1 (lower is better)
Translates to: VNSENREGSDPLKNI*QRSGLRIHWRDANW
Trigger: CCAATTGGCATCTCTCCAGTGAATCCTGAGACCTGACCTCTGGCAGATGTTTTTCAGAGGGTCTGATCCCTCCCTGTTCTCAGAATTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR GCA 90 bp CAGAACACTCTCATTCTCCTCAGGGTACTTAAGCTTCAGATTGCCTaGAGCTGTGAGCACAGACTTGACAGCCCGCATGCCATAGTCATA +
Preference number: 1 (lower is better)
Translates to: QNTLILLRVLKLQIA*SCEHRLDSPHAIVI
Trigger: TATGACTATGGCATGCGGGCTGTCAAGTCTGTGCTCACAGCTGCAGGCAATCTGAAGCTTAAGTACCCTGAGGAGAATGAGAGTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp CACACCAAGGAGAAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTaGTGGCTTGACAGACCTTCATATATCTCCATTTCCTCCTCCTGG +
Preference number: 1 (lower is better)
Translates to: HTKEKRNRPCSQRKI*WLDRPSYISISSSW
Trigger: CCAGGAGGAGGAAATGGAGATATATGAAGGTCTGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTCTCCTTGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp TGTAGTAGTCAACCGATAGCTTCTTCACGCTCTCCTGGAAGTACTTaGACATGGAGACGACCTCTGCCCGAATGTTGTCATCAAGCTCCA +
Preference number: 1 (lower is better)
Translates to: CSSQPIASSRSPGST*TWRRPLPECCHQAP
Trigger: TGGAGCTTGATGACAACATTCGGGCAGAGGTCGTCTCCATGTGCAAGTACTTCCAGGAGAGCGTGAAGAAGCTATCGGTTGACTACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp ACCTCATGGATCCAAAGCCGGATAAATTTTTCCAAATCCTGTAGGTaGGTGTGGGGACACAGCAGTACTCCCTGGATCACCCGTGAGAAA +
Preference number: 1 (lower is better)
Translates to: TSWIQSRINFSKSCR*VWGHSSTPWITREK
Trigger: TTTCTCACGGGTGATCCAGGGAGTACTGCTGTGTCCCCACACCCACCTACAGGATTTGGAAAAATTTATCCGGCTTTGGATCCATGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp CAGACCTGCCATTGGGTCTGCACCTGGAGACAGTATGAAAATCAATaGTACGCAGCAACTGGAATCACCGTAGGATCCCTGGAGATCAAA +
Preference number: 1 (lower is better)
Translates to: QTCHWVCTWRQYENQ*YAATGITVGSLEIK
Trigger: TTTGATCTCCAGGGATCCTACGGTGATTCCAGTTGCTGCGTACCATTGATTTTCATACTGTCTCCAGGTGCAGACCCAATGGCAGGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp GTAGACATTTTTGGGAAGGTGGAGAAGGAAGTCATTGGTGATAGCTaGTTTGCCAGTGCCTGTGGGACCCACGAACAATATCGGGATCTC +
Preference number: 1 (lower is better)
Translates to: VDIFGKVEKEVIGDS*FASACGTHEQYRDL
Trigger: GAGATCCCGATATTGTTCGTGGGTCCCACAGGCACTGGCAAATCAGCTATCACCAATGACTTCCTTCTCCACCTTCCCAAAAATGTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp CTGGTTATCCGAGAAGAGGAACACAGTACTCTTGGTGGCCACTCCTaGCTGCAACATTATCTTTTTCAGGTCCTCTCTCCAGTCGCTGTT +
Preference number: 1 (lower is better)
Translates to: LVIREEEHSTLGGHS*LQHYLFQVLSPVAV
Trigger: AACAGCGACTGGAGAGAGGACCTGAAAAAGATAATGTTGCAGTCAGGAGTGGCCACCAAGAGTACTGTGTTCCTCTTCTCGGATAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp CTGCCATATAACTGGCTTTGTACAGCTCTGGAAGAACAAAGGGTCTaGGATTGGGTCATTGAGGTAGGAACGCAGAAGGTTGGCCCTAAG +
Preference number: 1 (lower is better)
Translates to: LPYNWLCTALEEQRV*DWVIEVGTQKVGPK
Trigger: CTTAGGGCCAACCTTCTGCGTTCCTACCTCAATGACCCAATCTCAGACCCTTTGTTCTTCCAGAGCTGTACAAAGCCAGTTATATGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp TGTCCATCTGTCCTTCTCTCCTCCAAGGCCACTGATAAGCTTCTCTaGCCTGACGAGCTTCTGGGAGCAGATTTCTATATTTTTCTCCAG +
Preference number: 1 (lower is better)
Translates to: CPSVLLSSKATDKLL*PDELLGADFYIFLQ
Trigger: CTGGAGAAAAATATAGAAATCTGCTCCCAGAAGCTCGTCAGGGCAGAGAAGCTTATCAGTGGCCTTGGAGGAGAGAAGGACAGATGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp CCACTGCTCAGCTTCCCTCGAACCAGCTCAACGATCTGTGCGATCTaGTCATTGCTCTTTTTCAGAAAGTCTGTAAGGGTGTCTTCAACT +
Preference number: 1 (lower is better)
Translates to: PLLSFPRTSSTICAI*SLLFFRKSVRVSST
Trigger: AGTTGAAGACACCCTTACAGACTTTCTGAAAAAGAGCAATGACCAGATCGCACAGATCGTTGAGCTGGTTCGAGGGAAGCTGAGCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp CAATCTCACCCCATGACTTCTCTGATAACCATTCTGGAGCTGGGTTaGGGAAAGGATTGTCCAAGGCCACACCTCCAGTTAAAAGGAAGT +
Preference number: 1 (lower is better)
Translates to: QSHPMTSLITILELG*GKDCPRPHLQLKGS
Trigger: ACTTCCTTTTAACTGGAGGTGTGGCCTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATGGGGTGAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp AGCTGCCACCATTACCCTTGTATCGTTTACCGCCTGGGCCATGAGTaGTTTCCAGTAAGTATCCACAGTGGTAAATTTCTTGCCCTCTTC +
Preference number: 1 (lower is better)
Translates to: SCHHYPCIVYRLGHE*FPVSIHSGKFLALF
Trigger: GAAGAGGGCAAGAAATTTACCACTGTGGATACTTACTGGAAATCACTCATGGCCCAGGCGGTAAACGATACAAGGGTAATGGTGGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp TGGATGGCTTTGTTGATCATATTGGCAGCAATAGGACCTTGGCCTTaGCCAAGGGAGATGGTCTGTGTTTTAGTGCCTCCCATGCTAACA +
Preference number: 1 (lower is better)
Translates to: WMALLIILAAIGPWP*PREMVCVLVPPMLT
Trigger: TGTTAGCATGGGAGGCACTAAAACACAGACCATCTCCCTTGGTCAAGGCCAAGGTCCTATTGCTGCCAATATGATCAACAAAGCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp AGTCTGCCTTCATCTTCTCCAAGTTTTTCTCCAGAGAATACTCCTTaGTGGCAGCTGCCCCAATGGGCTCCAGCTTATCAACAAATTTGC +
Preference number: 1 (lower is better)
Translates to: SLPSSSPSFSPENTP*WQLPQWAPAYQQIC
Trigger: GCAAATTTGTTGATAAGCTGGAGCCCATTGGGGCAGCTGCCAGCAAGGAGTATTCTCTGGAGAAAAACTTGGAGAAGATGAAGGCAGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp ATTTTCACCCAGTCTCATGTACTCCACCCCCTGCTGTTTGAATGTTaGCTTCAGCAAGATGGGTTCAATAAAGGCATCCAGCTCTTCTCC +
Preference number: 1 (lower is better)
Translates to: IFTQSHVLHPLLFEC*LQQDGFNKGIQLFS
Trigger: GGAGAAGAGCTGGATGCCTTTATTGAACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACATGAGACTGGGTGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp CTTGGTGATGTCAGCATTCTCATGGAGACCAAATACTTCAGGGTGTaGTGTGATGGGGAGGGTCCTGAGATACTCAATGTAAGACTGGTA +
Preference number: 1 (lower is better)
Translates to: LGDVSILMETKYFRV*CDGEGPEILNVRLV
Trigger: TACCAGTCTTACATTGAGTATCTCAGGACCCTCCCCATCACAGCACACCCTGAAGTATTTGGTCTCCATGAGAATGCTGACATCACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp ATCACATCCATCTGTTGTTCTGGACTCATGGGTCTGCTTTCTGGGTaGGTCACACATAGAGCACCTTGCTTCCATCCAATCTCCTCTATT +
Preference number: 1 (lower is better)
Translates to: ITSICCSGLMGLLSG*VTHRAPCFHPISSI
Trigger: AATAGAGGAGATTGGATGGAAGCAAGGTGCTCTATGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGATGGATGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp AAGCGAAGTATTCCTCAATGTTCCGAGAGGAGTCATAGTCATTCTTaGGAGCGAAGTGAACCCAGTGCTCCTTCTGGGTCACAAAAAGCT +
Preference number: 1 (lower is better)
Translates to: KRSIPQCSERSHSHS*ERSEPSAPSGSQKA
Trigger: AGCTTTTTGTGACCCAGAAGGAGCACTGGGTTCACTTCGCTCCCAAGAATGACTATGACTCCTCTCGGAACATTGAGGAATACTTCGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp GCCGGGGAGAGTTTCCCAGGTACTCGTAGCCATACAAGGCTTCTGTaGTTATCATTTGCACATGAACGTTCTTTTCCGTCCAATAGTATC +
Preference number: 1 (lower is better)
Translates to: AGESFPGTRSHTRLL*LSFAHERSFPSNSI
Trigger: GATACTATTGGACGGAAAAGAACGTTCATGTGCAAATGATAACCACAGAAGCCTTGTATGGCTACGAGTACCTGGGAAACTCTCCCCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp TCACTGGAGAGATGCCAATTGGAAGCCCTGTACTTTTCAAGAAAATaGCTCATGACCTATTTAGGACAGATGCCAGACACAGGCTGCCTC +
Preference number: 1 (lower is better)
Translates to: SLERCQLEALYFSRK*LMTYLGQMPDTGCL
Trigger: GAGGCAGCCTGTGTCTGGCATCTGTCCTAAATAGGTCATGAGTCATTTTCTTGAAAAGTACAGGGCTTCCAATTGGCATCTCTCCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR TCA 90 bp GGGCACATCGCCTGTGTTCAGAAGCATGTTGATGTCTTCCACAAATaGCTCATGCTTGATCTGGTTATCCGAGAAGAGGAACACAGTACT +
Preference number: 1 (lower is better)
Translates to: GHIACVQKHVDVFHK*LMLDLVIREEEHST
Trigger: AGTACTGTGTTCCTCTTCTCGGATAACCAGATCAAGCATGAGTCATTTGTGGAAGACATCAACATGCTTCTGAACACAGGCGATGTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp TCTCCAGTGAATTTTTCTTTCTGTTCATCAGTTCAAACTCGTCATTaGGATCTTGGAGTCGGTCTTCCACCAGCTTCAGCTCCGCCCGTT +
Preference number: 1 (lower is better)
Translates to: SPVNFSFCSSVQTRH*DLGVGLPPASAPPV
Trigger: AACGGGCGGAGCTGAAGCTGGTGGAAGACCGACTCCAAGATCTCAATGACGAGTTTGAACTGATGAACAGAAAGAAAAATTCACTGGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp TTGTCGGGCCGCAAACATCGAAGGATTGCTATCTTTTCCAGTGTTTaGAGGAAAAACCAAGGTGAAGGTAGTGACTCTTCATGTGGCCAG +
Preference number: 1 (lower is better)
Translates to: LSGRKHRRIAIFSSV*RKNQGEGSDSSCGQ
Trigger: CTGGCCACATGAAGAGTCACTACCTTCACCTTGGTTTTTCCTTCAAACACTGGAAAAGATAGCAATCCTTCGATGTTTGCGGCCCGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp ACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATaGTGCACTCTCTCCGGGTTTCAGCCAAATAATGGGCAATGGGTC +
Preference number: 1 (lower is better)
Translates to: TRLIHWTHINVLMQE*CTLSGFQPNNGQWV
Trigger: GACCCATTGCCCATTATTTGGCTGAAACCCGGAGAGAGTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp CGATCCTTCATCCCGGGGTTGCAGGCGATATTCAGGATGGGAATATaGTGCTTGAACTTCTCAATCTTCAACTTGACATTCTCTGCTAAG +
Preference number: 1 (lower is better)
Translates to: RSFIPGLQAIFRMGI*CLNFSIFNLTFSAK
Trigger: CTTAGCAGAGAATGTCAAGTTGAAGATTGAGAAGTTCAAGCAGCATATTCCCATCCTGAATATCGCCTGCAACCCCGGGATGAAGGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp CCAGGGCACTGGCTGCAGCTTCATTTTTCTGATGTTGTTGTTCAATaGTTCCAGGAAAACTTCGTAGTCTGGCTTTGGAAGAACAACTCC +
Preference number: 1 (lower is better)
Translates to: PGHWLQLHFSDVVVQ*FQENFVVWLWKNNS
Trigger: GGAGTTGTTCTTCCAAAGCCAGACTACGAAGTTTTCCTGGAAGCATTGAACAACAACATCAGAAAAATGAAGCTGCAGCCAGTGCCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp GCTCCAGCTTATCAACAAATTTGCCGAATCCATATTCCAGCATATTaGCGAGGCACGTGGTCTCTGTGGGCTTTATCTCATAGCCAACAA +
Preference number: 1 (lower is better)
Translates to: APAYQQICRIHIPAY*RGTWSLWALSHSQQ
Trigger: TTGTTGGCTATGAGATAAAGCCCACAGAGACCACGTGCCTCGCCAATATGCTGGAATATGGATTCGGCAAATTTGTTGATAAGCTGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp GAATTTTTCTTTCTGTTCATCAGTTCAAACTCGTCATTGAGATCTTaGAGTCGGTCTTCCACCAGCTTCAGCTCCGCCCGTTTCTGGTTC +
Preference number: 1 (lower is better)
Translates to: EFFFLFISSNSSLRS*SRSSTSFSSARFWF
Trigger: GAACCAGAAACGGGCGGAGCTGAAGCTGGTGGAAGACCGACTCCAAGATCTCAATGACGAGTTTGAACTGATGAACAGAAAGAAAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp TATCGTAGCTGTGAAATCCACTGGAAGTCATTTAGACTGTTGATATaGTCATGCCTCAGTTTGGCCACCACATCACGAGCATGGACATCG +
Preference number: 1 (lower is better)
Translates to: YRSCEIHWKSFRLLI*SCLSLATTSRAWTS
Trigger: CGATGTCCATGCTCGTGATGTGGTGGCCAAACTGAGGCATGATCATATCAACAGTCTAAATGACTTCCAGTGGATTTCACAGCTACGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp CAGGCAGATGATACATTTTTAATGACAGCTGGCTGGAAATCAGGGTaGTCAATAAACCTTTCCCGGATTCGCTTCATGATCACCGAAGGG +
Preference number: 1 (lower is better)
Translates to: QADDTFLMTAGWKSG*SINLSRIRFMITEG
Trigger: CCCTTCGGTGATCATGAAGCGAATCCGGGAAAGGTTTATTGATCACCCTGATTTCCAGCCAGCTGTCATTAAAAATGTATCATCTGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp TCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTTaGTGGCTGTCTCATCTTCGAGGATGTTGCCCTCACACAGGGATA +
Preference number: 1 (lower is better)
Translates to: SQRSPQTELSKRTKF*WLSHLRGCCPHTGI
Trigger: TATCCCTGTGTGAGGGCAACATCCTCGAAGATGAGACAGCCATCAAAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp GTAAATCACCCAGAGCTGCAGCCAGAACTTTATAAGCTGATGTCTTaGCACCCATTGGATCTCCAACAATCATGTAGCCATGTCTTACCA +
Preference number: 1 (lower is better)
Translates to: VNHPELQPELYKLMS*HPLDLQQSCSHVLP
Trigger: TGGTAAGACATGGCTACATGATTGTTGGAGATCCAATGGGTGGCAAGACATCAGCTTATAAAGTTCTGGCTGCAGCTCTGGGTGATTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp AGAAAAAGATGGCTGCAGAATGAACAGCGACAGGCTTGTAGCCCATaGGGGTCTCATCAATTTGGGTTTCTGTCACAGATGCTATTTCTT +
Preference number: 1 (lower is better)
Translates to: RKRWLQNEQRQACSP*GSHQFGFLSQMLFL
Trigger: AAGAAATAGCATCTGTGACAGAAACCCAAATTGATGAGACCCGCATGGGCTACAAGCCTGTCGCTGTTCATTCTGCAGCCATCTTTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp TTCTGGGAAGATGTTGTTTTTGGTGAGTTTCACACTCTTGGGCCTTaGGTTACGATCATCCATGCCCATGATCAGGTTGCGGAAAAATAC +
Preference number: 1 (lower is better)
Translates to: FWEDVVFGEFHTLGP*VTIIHAHDQVAEKY
Trigger: GTATTTTTCCGCAACCTGATCATGGGCATGGATGATCGTAACCCAAGGCCCAAGAGTGTGAAACTCACCAAAAACAACATCTTCCCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp AACTCAGATGGCTTCTGCTCTTTACTTTCTATTTCCATCTCCTGCTaGAACATCACATCCATCTGTTGTTCTGGACTCATGGGTCTGCTT +
Preference number: 1 (lower is better)
Translates to: NSDGFCSLLSISISC*NITSICCSGLMGLL
Trigger: AAGCAGACCCATGAGTCCAGAACAACAGATGGATGTGATGTTGCAGCAGGAGATGGAAATAGAAAGTAAAGAGCAGAAGCCATCTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp TCTAACTCAGATGGCTTCTGCTCTTTACTTTCTATTTCCATCTCCTaGTGCAACATCACATCCATCTGTTGTTCTGGACTCATGGGTCTG +
Preference number: 1 (lower is better)
Translates to: SNSDGFCSLLSISIS*CNITSICCSGLMGL
Trigger: CAGACCCATGAGTCCAGAACAACAGATGGATGTGATGTTGCAGCAGGAGATGGAAATAGAAAGTAAAGAGCAGAAGCCATCTGAGTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp GATTTCGGCTACTTTCAAAGACATCTTCTATTCACTGGGCAAGTCTaGATAATCCATCAGGAACTCAAGCCGTTCACTTGCATCTCTGAG +
Preference number: 1 (lower is better)
Translates to: DFGYFQRHLLFTGQV*IIHQELKPFTCISE
Trigger: CTCAGAGATGCAAGTGAACGGCTTGAGTTCCTGATGGATTATGCAGACTTGCCCAGTGAATAGAAGATGTCTTTGAAAGTAGCCGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp AAGTTAACAGATGAGATTATGCTGAGTCCCAGTTTTGACTCAGAGTaGGATAGAGAAGAGATGGCCCAAGAGCCTTCTTCACTAACTCCT +
Preference number: 1 (lower is better)
Translates to: KLTDEIMLSPSFDSE*DREEMAQEPSSLTP
Trigger: AGGAGTTAGTGAAGAAGGCTCTTGGGCCATCTCTTCTCTATCCCACTCTGAGTCAAAACTGGGACTCAGCATAATCTCATCTGTTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR CCA 90 bp CTCATGAGCAGATTTCGGCTACTTTCAAAGACATCTTCTATTCACTaGGCAAGTCTGCATAATCCATCAGGAACTCAAGCCGTTCACTTG +
Preference number: 1 (lower is better)
Translates to: LMSRFRLLSKTSSIH*ASLHNPSGTQAVHL
Trigger: CAAGTGAACGGCTTGAGTTCCTGATGGATTATGCAGACTTGCCCAGTGAATAGAAGATGTCTTTGAAAGTAGCCGAAATCTGCTCATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp ATATCTTCGGAGCTGAAGATCGGTTCCAGGTACAACCAAGTTACTTaGCATTTTAACCAGGCATCCAAATTTTCTTGTACCCGCACTAGC +
Preference number: 1 (lower is better)
Translates to: ISSELKIGSRYNQVT*HFNQASKFSCTRTS
Trigger: GCTAGTGCGGGTACAAGAAAATTTGGATGCCTGGTTAAAATGCCAAGTAACTTGGTTGTACCTGGAACCGATCTTCAGCTCCGAAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 90 bp TTCGCATCATCACCTCCTCGTTCTCCGGGGCAATCATGTCTTTTCTaGTACCATTGGTCAAATAGTAGTAATATCTCTCCAGGTCTAACT +
Preference number: 1 (lower is better)
Translates to: FASSPPRSPGQSCLF*YHWSNSSNISPGLT
Trigger: AGTTAGACCTGGAGAGATATTACTACTATTTGACCAATGGTATCAGAAAAGACATGATTGCCCCGGAGAACGAGGAGGTGATGATGCGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp ATTCGCAGGAATAGTCTCCTCCTCCTTGGTGATATATTCTGTCCATaGATTCCAGTGTCCACCCCCTTGTTTGAGGAAGTAAAAATCATA +
Preference number: 1 (lower is better)
Translates to: IRRNSLLLLGDIFCP*IPVSTPLFEEVKII
Trigger: TATGATTTTTACTTCCTCAAACAAGGGGGTGGACACTGGAATGCATGGACAGAATATATCACCAAGGAGGAGGAGACTATTCCTGCGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 90 bp CATCATCTCATAGATCTGGATAATCTTCCCAATGAACCAGGGCACTaGCTGCAGCTTCATTTTTCTGATGTTGTTGTTCAATGCTTCCAG +
Preference number: 1 (lower is better)
Translates to: HHLIDLDNLPNEPGH*LQLHFSDVVVQCFQ
Trigger: CTGGAAGCATTGAACAACAACATCAGAAAAATGAAGCTGCAGCCAGTGCCCTGGTTCATTGGGAAGATTATCCAGATCTATGAGATGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp GAGTATTCAATAATATTTTCACCCAGTCTCATGTACTCCACCCCCTaGTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCAATAAAGGCA +
Preference number: 1 (lower is better)
Translates to: EYSIIFSPSLMYSTP*CLNVAFSKMGSIKA
Trigger: TGCCTTTATTGAACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACATGAGACTGGGTGAAAATATTATTGAATACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 90 bp ACATTACTACACAGCCTTACTAAGTATATCCATTGGCCAAGTATGTaGCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCT +
Preference number: 1 (lower is better)
Translates to: TLLHSLTKYIHWPSM*HKPPGCDIFLVFTP
Trigger: AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTTAGTAAGGCTGTGTAGTAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR CCA 90 bp TCAGAAATGTTCACATTACTACACAGCCTTACTAAGTATATCCATTaGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTA +
Preference number: 1 (lower is better)
Translates to: SEMFTLLHSLTKYIH*PSMCHKPPGCDIFL
Trigger: TAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTTAGTAAGGCTGTGTAGTAATGTGAACATTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR-3UTR CCA 90 bp CTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGGCCACACCTCCAGTTAAAAGGACACACCTGCTCACGGTaGCGGGGGAGGCCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LELGWGKDCPRPHLQLKGHTCSR*RGRPAP
Trigger: TGGAGCAGGCCTCCCCCGCCACCGTGAGCAGGTGTG...TCCTTTTAACTGGAGGTGTGGCCTTGGACAATCCTTTCCCCAACCCAGCTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp CTTCCCACTCCCTCCGGACTGTCTCGGCAGGGTCAGCAGCACTCCTaGGAAGAGCTGGTTGGTTTCCTGGTTGTCCTTGGTGATGTCAGC +
Preference number: 2 (lower is better)
Translates to: LPTPSGLSRQGQQHS*EELVGFLVVLGDVS
Trigger: GCTGACATCACCAAGGACAACCAGGAAACCAACCAGCTCTTCCAAGGAGTGCTGCTGACCCTGCCGAGACAGTCCGGAGGGAGTGGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp AAGTGCTGGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTGCCTCAGAGGTTTGGATaGGCTGAGGCTGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: KCWHGLGQVSLTLILDRLPQRFG*AEAEGQ
Trigger: CTGCCCTTCAGCCTCAGCTCATCCAAACCTCTGAGG...CAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp AAGTGCTGGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTGTGGGTGACAGGTGGATaGGCACCTTCTCCATGGTCT +
Preference number: 2 (lower is better)
Translates to: KCWHGLGQVSLTLILDRLWVTGG*APSPWS
Trigger: AGACCATGGAGAAGGTGCTCATCCACCTGTCACCCA...CAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CCTCTCTGGCTTCAGCCCCTTCATGACGCAAATGCTCTCCATAACCAGCTTGACGGGCCTGGTGGGTTCTaGATGGACTTCACCAGCGTG +
Preference number: 2 (lower is better)
Translates to: PLWLQPLHDANALHNQLDGPGGF*MDFTSV
Trigger: CACGCTGGTGAAGTCCATGCAGAACCCACCAGGCCC...GTCAAGCTGGTTATGGAGAGCATTTGCGTCATGAAGGGGCTGAAGCCAGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp AAGTGCTGGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTGACACAGATAACTACCTaGCCTGGCCACTCCAAGACC +
Preference number: 2 (lower is better)
Translates to: KCWHGLGQVSLTLILDRLTQITT*PGHSKT
Trigger: GGTCTTGGAGTGGCCAGGCCAGGTAGTTATCTGTGT...CAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp AAGTGCTGGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTGTCCAAATCCTGTAGGTaGGTGTGGGGACACAGCAGT +
Preference number: 2 (lower is better)
Translates to: KCWHGLGQVSLTLILDRLSKSCR*VWGHSS
Trigger: ACTGCTGTGTCCCCACACCCACCTACAGGATTTGGA...CAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TCTGGCTTCAGCCCCTTCATGACGCAAATGCTCTCCATAACCAGCTaGACAGGGCCTGGTGGGTTCTGCATGGACTTCACCAGCGTGATG +
Preference number: 2 (lower is better)
Translates to: SGFSPFMTQMLSITS*TGPGGFCMDFTSVM
Trigger: CATCACGCTGGTGAAGTCCATGCAGAACCCACCAGGCCCTGTCAAGCTGGTTATGGAGAGCATTTGCGTCATGAAGGGGCTGAAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp ATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCCAAACTGCAGGGCAGAACTTGGCCAGGTTaGCATCCAGCAAGGCCCGGA +
Preference number: 2 (lower is better)
Translates to: IQLFSNVFQQDRGAKLQGRTWPG*HPARPG
Trigger: TCCGGGCCTTGCTGGATGTCAACCTGGCCAAGTTCT...GCCCTGCAGTTTGGCACCCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp GCTCCACGTCCTCCAGGAATTTGTTGGCCACCAACTCTAAGGCATCGGTTGGCCTGGGTCACAAAAAGCTaGGCACAGGTGGGGATCCAT +
Preference number: 2 (lower is better)
Translates to: APRPPGICWPPTLRHRLAWVTKS*AQVGIH
Trigger: ATGGATCCCCACCTGTGCCCAGCTTTTTGTGACCCA...GGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CCTCTCTGGCTTCAGCCCCTTCATGACGCAAATGCTCTCCATAACCAGCTTGACTCCTGTAGGTGGGTGTaGGGACACAGCAGTACTCCC +
Preference number: 2 (lower is better)
Translates to: PLWLQPLHDANALHNQLDSCRWV*GHSSTP
Trigger: GGGAGTACTGCTGTGTCCCCACACCCACCTACAGGA...GTCAAGCTGGTTATGGAGAGCATTTGCGTCATGAAGGGGCTGAAGCCAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGGTGATGGGTAGGACTTaGCTGCCCACATGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMVMGRT*LPTWLA
Trigger: TGCCAGCCATGTGGGCAGCCAAGTCCTACCCATCAC...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ACCTCTGCCCGAATGTTGTCATCAAGCTCCACGTCCTCCAGGAATTaGTTGGCCACCAACTCTAAGGCATCGGTTGGCCAGGACTGGAAC +
Preference number: 2 (lower is better)
Translates to: TSARMLSSSSTSSRN*LATNSKASVGQDWN
Trigger: GTTCCAGTCCTGGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGCTTGATGACAACATTCGGGCAGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CCTCTCTGGCTTCAGCCCCTTCATGACGCAAATGCTCTCCATAACCAGCTTGACTTCTTGGGAGCGAAGTaGACCCAGTGCTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: PLWLQPLHDANALHNQLDFLGAK*TQCSFW
Trigger: CCAGAAGGAGCACTGGGTTCACTTCGCTCCCAAGAA...GTCAAGCTGGTTATGGAGAGCATTTGCGTCATGAAGGGGCTGAAGCCAGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp AAGTGCTGGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTGCTTTCAGGAATTCACTaGTGCCCTTCTCTGCCATGT +
Preference number: 2 (lower is better)
Translates to: KCWHGLGQVSLTLILDRLLSGIH*CPSLPC
Trigger: ACATGGCAGAGAAGGGCATCAGTGAATTCCTGAAAG...CAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp GCTCCACGTCCTCCAGGAATTTGTTGGCCACCAACTCTAAGGCATCGGTTGGCCGGGAATGATGAGGTCTaGTACCTTTGCATTCGCAGG +
Preference number: 2 (lower is better)
Translates to: APRPPGICWPPTLRHRLAGNDEV*YLCIRR
Trigger: CCTGCGAATGCAAAGGTATCAGACCTCATCATTCCC...GGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TGTCCTGGCCGCTGTTTGCATCTTTTCCACGAGGTCAGCCTTCTCATCTGCTGGAAGTCCAGACAGGGCTaGACAAGCCACGTGAACATG +
Preference number: 2 (lower is better)
Translates to: CPGRCLHLFHEVSLLICWKSRQG*TSHVNM
Trigger: CATGTTCACGTGGCTTGTGCAGCCCTGTCTGGACTT...CCAGCAGATGAGAAGGCTGACCTCGTGGAAAAGATGCAAACAGCGGCCAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp AAGTGCTGGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTGGATATATTCTGTCCATaGATTCCAGTGTCCACCCCC +
Preference number: 2 (lower is better)
Translates to: KCWHGLGQVSLTLILDRLDIFCP*IPVSTP
Trigger: GGGGGTGGACACTGGAATGCATGGACAGAATATATC...CAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACGGCAGCCTCAAGTGCTaGCATGGCCTCGGCCAGGTC +
Preference number: 2 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDGSLKC*HGLGQV
Trigger: GACCTGGCCGAGGCCATGCCAGCACTTGAGGCTGCC...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCCAAACTGCAGGGCCAGCTTGACAGGGCCTaGTGGGTTCTGCATGGACTT +
Preference number: 2 (lower is better)
Translates to: IQLFSNVFQQDRGAKLQGQLDRA*WVLHGL
Trigger: AAGTCCATGCAGAACCCACCAGGCCCTGTCAAGCTG...GCCCTGCAGTTTGGCACCCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TCTGCCCGAATGTTGTCATCAAGCTCCACGTCCTCCAGGAATTTGTaGGCCACCAACTCTAAGGCATCGGTTGGCCAGGACTGGAACCAA +
Preference number: 2 (lower is better)
Translates to: SARMLSSSSTSSRNL*ATNSKASVGQDWNQ
Trigger: TTGGTTCCAGTCCTGGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGCTTGATGACAACATTCGGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CAGAGGTCAGGTCTCAGGATTCACTGGAGAGATGCCAATTGGAAGCCCTGTACTACCTACACAGCTCTGTaGGGCCATTTCCTCCTGACC +
Preference number: 2 (lower is better)
Translates to: QRSGLRIHWRDANWKPCTTYTAL*GHFLLT
Trigger: GGTCAGGAGGAAATGGCCTCACAGAGCTGTGTAGGT...AGTACAGGGCTTCCAATTGGCATCTCTCCAGTGAATCCTGAGACCTGACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR TCA 90 bp GCTCCACGTCCTCCAGGAATTTGTTGGCCACCAACTCTAAGGCATCGGTTGGCCGATCCCTCTTGCTCATaGGCAGATTTCGGCTACTTT +
Preference number: 2 (lower is better)
Translates to: APRPPGICWPPTLRHRLADPSCS*ADFGYF
Trigger: AAAGTAGCCGAAATCTGCTCATGAGCAAGAGGGATC...GGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCAATGCTTCCAGGAAAACTTCGTAGTCTGGCTTTGGAAGAACAACTCCAGGAACGCGCCTCCCGGCAGTaGTTCTGGACCACCTCCTTG +
Preference number: 2 (lower is better)
Translates to: SMLPGKLRSLALEEQLQERASRQ*FWTTSL
Trigger: CAAGGAGGTGGTCCAGAAGCACTGCCGGGAGGCGCG...TTCCTGGAGTTGTTCTTCCAAAGCCAGACTACGAAGTTTTCCTGGAAGCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp GATTTGCCAGTGCCTGTGGGACCCACGAACAATATCGGGATCTCATGGTCCAGGTATTGGCGAGGCACGTaGTCTCTGTGGGCTTTATCT +
Preference number: 2 (lower is better)
Translates to: DLPVPVGPTNNIGISWSRYWRGT*SLWALS
Trigger: AGATAAAGCCCACAGAGACCACGTGCCTCGCCAATA...CCTGGACCATGAGATCCCGATATTGTTCGTGGGTCCCACAGGCACTGGCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp GATTTGCCAGTGCCTGTGGGACCCACGAACAATATCGGGATCTCATGGTCCAGGCTTCTCAGTCATTCTTaGCTGGTCAGCTGCCACCAT +
Preference number: 2 (lower is better)
Translates to: DLPVPVGPTNNIGISWSRLLSHS*LVSCHH
Trigger: ATGGTGGCAGCTGACCAGCCAAGAATGACTGAGAAG...CCTGGACCATGAGATCCCGATATTGTTCGTGGGTCCCACAGGCACTGGCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCCAAACTGCAGGGCGCACTTCTTCAAGTGTaGCTGTACTCGGAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: IQLFSNVFQQDRGAKLQGALLQV*LYSEWV
Trigger: GACCCACTCCGAGTACAGCCACACTTGAAGAAGTGC...GCCCTGCAGTTTGGCACCCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TGTCCTGGCCGCTGTTTGCATCTTTTCCACGAGGTCAGCCTTCTCATCTGCTGGGTGGCAACAATCTTCTaGGCAAGACTTCTGGAGTCC +
Preference number: 2 (lower is better)
Translates to: CPGRCLHLFHEVSLLICWVATIF*ARLLES
Trigger: GGACTCCAGAAGTCTTGCCCAGAAGATTGTTGCCAC...CCAGCAGATGAGAAGGCTGACCTCGTGGAAAAGATGCAAACAGCGGCCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGTCGGTTGGCCAGGACTaGAACCAATCAATGGTGCAG +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMSVGQD*NQSMVQ
Trigger: CTGCACCATTGATTGGTTCCAGTCCTGGCCAACCGA...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp GGTCTCTGTGGGCTTTATCTCATAGCCAACAATGTCACTGATCTGTaGCCAGTGCCGATCCTTCATCCCGGGGTTGCAGGCGATATTCAG +
Preference number: 2 (lower is better)
Translates to: GLCGLYLIANNVTDL*PVPILHPGVAGDIQ
Trigger: CTGAATATCGCCTGCAACCCCGGGATGAAGGATCGGCACTGGCAACAGATCAGTGACATTGTTGGCTATGAGATAAAGCCCACAGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TCCTTGCTGGCAGCTGCCCCAATGGGCTCCAGCTTATCAACAAATTaGCCGAATCCATATTCCAGCATATTGGCGAGGCACGTGGTCTCT +
Preference number: 2 (lower is better)
Translates to: SLLAAAPMGSSLSTN*PNPYSSILARHVVS
Trigger: AGAGACCACGTGCCTCGCCAATATGCTGGAATATGGATTCGGCAAATTTGTTGATAAGCTGGAGCCCATTGGGGCAGCTGCCAGCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp GGATGTCCCGGATTTCATCCAGCAGGGAGGAGTACAGCCGCATCATaGAGAAGGCAAGGTGGATGGGAGATGTTTGCACCACAAATTTGC +
Preference number: 2 (lower is better)
Translates to: GCPGFHPAGRSTAAS*RRQGGWEMFAPQIC
Trigger: GCAAATTTGTGGTGCAAACATCTCCCATCCACCTTGCCTTCTCAATGATGCGGCTGTACTCCTCCCTGCTGGATGAAATCCGGGACATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TGGGATGACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATaGGGCCCGATAATCCACCGTGAAGGCACCCAGGTAAGCCACGGT +
Preference number: 2 (lower is better)
Translates to: WDDLVLTGNQPFILA*GPIIHREGTQVSHG
Trigger: ACCGTGGCTTACCTGGGTGCCTTCACGGTGGATTATCGGGCCCAATGCCAAAATGAATGGTTGGTTTCCTGTAAGGACAAGGTCATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGTGGCCAAAGGCACGGTaGTGTGCATGGATGCAATTT +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMWPKAR*CAWMQF
Trigger: AAATTGCATCCATGCACATCACCGTGCCTTTGGCCA...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGCCCGATAATCCACCGTaGAGGCACCCAGGTAAGCCA +
Preference number: 2 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKPDNPP*RHPGKP
Trigger: TGGCTTACCTGGGTGCCTTCACGGTGGATTATCGGG...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp ATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCCAAACTGCAGGGCACTGATGCCCTTCTCTaGCATGTTGTCCAGCAAGTC +
Preference number: 2 (lower is better)
Translates to: IQLFSNVFQQDRGAKLQGTDALL*HVVQQV
Trigger: GACTTGCTGGACAACATGGCAGAGAAGGGCATCAGT...GCCCTGCAGTTTGGCACCCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp ATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCCAAACTGCAGGGCTCTTGGCTGGTCAGCTaGCACCATTACCCTTGTATC +
Preference number: 2 (lower is better)
Translates to: IQLFSNVFQQDRGAKLQGSWLVS*HHYPCI
Trigger: GATACAAGGGTAATGGTGGCAGCTGACCAGCCAAGA...GCCCTGCAGTTTGGCACCCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATGTCTTGCCACCCATTGGATCTCCAACAATCATGTAGCCATGTCTTACCAGCAGGCCTTGAGGTTATCTaGCAGCTCAGCCCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: MSCHPLDLQQSCSHVLPAGLEVI*QLSPAS
Trigger: GCTGGCAGGGCTGAGCTGCCAGATAACCTCAAGGCC...TGCTGGTAAGACATGGCTACATGATTGTTGGAGATCCAATGGGTGGCAAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTGTTCCCGGAAAGCATTaGCCAGGACACCATCTGTCC +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLVPGKH*PGHHLS
Trigger: GGACAGATGGTGTCCTGGCCAATGCTTTCCGGGAAC...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGATTTGCCAGTGCCTGTaGGACCCACGAACAATATCG +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMICQCL*DPRTIS
Trigger: CGATATTGTTCGTGGGTCCCACAGGCACTGGCAAAT...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGCTGCTTTCTTCCCTATaGGAGGCCCAAAAAGGCCTT +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMLLSSL*EAQKGL
Trigger: AAGGCCTTTTTGGGCCTCCCATAGGGAAGAAAGCAG...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTCTTGACAGGGCCTGGTaGGTTCTGCATGGACTTCAC +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLLDRAW*VLHGLH
Trigger: GTGAAGTCCATGCAGAACCCACCAGGCCCTGTCAAG...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TGTGACCCACAGCTGCTCGTAGGGGATTTTGTTGATCATCAGGGTTaGAAGAAGAGGGAAGGAGCTCTTCTCCTTCTCCAGCAGCTCTTC +
Preference number: 2 (lower is better)
Translates to: CDPQLLVGDFVDHQG*KKREGALLLLQQLF
Trigger: GAAGAGCTGCTGGAGAAGGAGAAGAGCTCCTTCCCTCTTCTTCAAACCCTGATGATCAACAAAATCCCCTACGAGCAGCTGTGGGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp GCTTGGGCGCAGGCACATCGATCAAGGTCTTGGTCAACTTGTAGGTaGTCCTCCACATATTCCCTATCTCCTCTGCGATTTGCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: AWAQAHRSRSWSTCR*SSTYSLSPLRFAQH
Trigger: ATGCTGAGCAAATCGCAGAGGAGATAGGGAATATGTGGAGGACAACCTACAAGTTGACCAAGACCTTGATCGATGTGCCTGCGCCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp CATTTGCGGTCATCAGTTATGGAAGACGCTTGTTCCCGGAAAGCATaGGCCAGGACACCATCTGTCCACTCATGGCTCACAGCATCAAAG +
Preference number: 2 (lower is better)
Translates to: HLRSSVMEDACSRKA*ARTPSVHSWLTASK
Trigger: CTTTGATGCTGTGAGCCATGAGTGGACAGATGGTGTCCTGGCCAATGCTTTCCGGGAACAAGCGTCTTCCATAACTGATGACCGCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp CTCCAGCTCAATTTTCACCATCATCATCGCTGTATCCTCAGAGGTTaGGATGAGCTGAGGCTGAAGGGCAGTGAGCTCTACCTGCATGAC +
Preference number: 2 (lower is better)
Translates to: LQLNFHHHHRCILRG*DELRLKGSELYLHD
Trigger: GTCATGCAGGTAGAGCTCACTGCCCTTCAGCCTCAGCTCATCCAAACCTCTGAGGATACAGCGATGATGATGGTGAAAATTGAGCTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGGGAGCTGTAGGGACATaGAGGAAGCAACAGAAGCGA +
Preference number: 2 (lower is better)
Translates to: WRELARSSPLQLCKLSGLGAVGT*RKQQKR
Trigger: TCGCTTCTGTTGCTTCCTTCATGTCCCTACAGCTCC...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp GATTTGCCAGTGCCTGTGGGACCCACGAACAATATCGGGATCTCATGGTCCAGGATTCATCCACTCCTCTaGCTTGGTGCTGAACTCATA +
Preference number: 2 (lower is better)
Translates to: DLPVPVGPTNNIGISWSRIHPLL*LGAELI
Trigger: TATGAGTTCAGCACCAAGTCAGAGGAGTGGATGAAT...CCTGGACCATGAGATCCCGATATTGTTCGTGGGTCCCACAGGCACTGGCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGGTCATTGGTGATAGCTaGTTTGCCAGTGCCTGTGGG +
Preference number: 2 (lower is better)
Translates to: WRELARSSPLQLCKLSGLVIGDS*FASACG
Trigger: CCCACAGGCACTGGCAAATCAGCTATCACCAATGAC...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACCTGGCCAACATCACCTaGTCCACCTGCTGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHLANIT*STCCSH
Trigger: GTGGCTGCAGCAGGTGGAGCAGGTGATGTTGGCCAG...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp ATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCCAAACTGCAGGGCTTGAAGACCACACACTaGTTGGCCAAAGCTTTAGCC +
Preference number: 2 (lower is better)
Translates to: IQLFSNVFQQDRGAKLQGLKTTH*LAKALA
Trigger: GGCTAAAGCTTTGGCCAAGCAGTGTGTGGTCTTCAA...GCCCTGCAGTTTGGCACCCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CCTCTCTGGCTTCAGCCCCTTCATGACGCAAATGCTCTCCATAACCAGCTTGACAAAAGAAACAGGCCTTaGAGCCAGAGGAAGATCTGC +
Preference number: 2 (lower is better)
Translates to: PLWLQPLHDANALHNQLDKRNRP*SQRKIC
Trigger: GCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTT...GTCAAGCTGGTTATGGAGAGCATTTGCGTCATGAAGGGGCTGAAGCCAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGGTAAATTGTCTGGGTTaGTTGGACCAGCATCTTCCC +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMVNCLG*LDQHLP
Trigger: GGGAAGATGCTGGTCCAAGCAACCCAGACAATTTAC...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACTCCCGGCAGTGCTTCTaGACCACCTCCTTGTACTCG +
Preference number: 2 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDSRQCF*TTSLYS
Trigger: CGAGTACAAGGAGGTGGTCCAGAAGCACTGCCGGGA...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp GCTCCACGTCCTCCAGGAATTTGTTGGCCACCAACTCTAAGGCATCGGTTGGCCCCAGATCTAGGTTCTTaGAGAGGTCATGAAGCTTTT +
Preference number: 2 (lower is better)
Translates to: APRPPGICWPPTLRHRLAPDLGS*RGHEAF
Trigger: AAAAGCTTCATGACCTCTCCAAGAACCTAGATCTGG...GGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACGATAACTACCTGGCCTaGCCACTCCAAGACCCAGGC +
Preference number: 2 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDDNYLA*PLQDPG
Trigger: GCCTGGGTCTTGGAGTGGCCAGGCCAGGTAGTTATC...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CCACTTGTGAAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAAGTAGCGGTTCCAGCACAGGCGGTAGGTaGCAACAATCTTCTGGGCAA +
Preference number: 2 (lower is better)
Translates to: PLVKMQIPVSASLPSSGSSTGGR*QQSSGQ
Trigger: TTGCCCAGAAGATTGTTGCCACCTACCGCCTGTGCT...GGAACCGCTACTTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGCCCCGATTGGACTCATaGCTAATGAGAAATAGGCTC +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMPRLDS*LMRNRL
Trigger: GAGCCTATTTCTCATTAGCCATGAGTCCAATCGGGG...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACACCTCAAGTGCTGGCATaGCCTCGGCCAGGTCTCCCT +
Preference number: 2 (lower is better)
Translates to: MLFLASQRSPQTELSKRTPQVLA*PRPGLP
Trigger: AGGGAGACCTGGCCGAGGCCATGCCAGCACTTGAGG...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACTCAGTCGCTCCCGTTTaGGAGCCACAACCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDSVAPV*EPQPWP
Trigger: TGGCCAAGGTTGTGGCTCCCAAACGGGAGCGACTGA...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGCTTTACAGTAGAACATaGACAGGAGGGACAGCAGGA +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMLYSRT*TGGTAG
Trigger: TCCTGCTGTCCCTCCTGTCCATGTTCTACTGTAAAG...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ACAATGTCACTGATCTGTTGCCAGTGCCGATCCTTCATCCCGGGGTaGCAGGCGATATTCAGGATGGGAATATGCTGCTTGAACTTCTCA +
Preference number: 2 (lower is better)
Translates to: TMSLICCQCRSFIPG*QAIFRMGICCLNFS
Trigger: TGAGAAGTTCAAGCAGCATATTCCCATCCTGAATATCGCCTGCAACCCCGGGATGAAGGATCGGCACTGGCAACAGATCAGTGACATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ACCATCTGTCCACTCATGGCTCACAGCATCAAAGCAGCCATACAGTaGCCCCATTGTGATAGCCTTGGGGTTGATGATCTTGAACTCCAC +
Preference number: 2 (lower is better)
Translates to: TICPLMAHSIKAAIQ*PHCDSLGVDDLELH
Trigger: GTGGAGTTCAAGATCATCAACCCCAAGGCTATCACAATGGGGCAACTGTATGGCTGCTTTGATGCTGTGAGCCATGAGTGGACAGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ATCATTGAGAAGGCAAGGTGGATGGGAGATGTTTGCACCACAAATTaGCAATGGAGCCGACTAAAGTCCAGACAGGGCTGCACAAGCCAC +
Preference number: 2 (lower is better)
Translates to: IIEKARWMGDVCTTN*QWSRLKSRQGCTSH
Trigger: GTGGCTTGTGCAGCCCTGTCTGGACTTTAGTCGGCTCCATTGCAAATTTGTGGTGCAAACATCTCCCATCCACCTTGCCTTCTCAATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CATTACCTCCTCCAGGTTAAAGTCGTTGGGAAGCTTGGAGAGTATATCCTGGGCCAGGAGCTCATCATTTaGCAGGAAGAAGAACCTGGG +
Preference number: 2 (lower is better)
Translates to: HYLLQVKVVGKLGEYILGQELII*QEEEPG
Trigger: CCCAGGTTCTTCTTCCTGTCAAATGATGAGCTCCTG...GCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp AAGTGCTGGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTGAGTCATTTAGACTGTTaGTATGATCATGCCTCAGTT +
Preference number: 2 (lower is better)
Translates to: KCWHGLGQVSLTLILDRLSHLDC*YDHASV
Trigger: AACTGAGGCATGATCATATCAACAGTCTAAATGACT...CAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGTTCGGAATAAGGCCTTaGGGTTATCTGGCAGCTCAG +
Preference number: 2 (lower is better)
Translates to: WRELARSSPLQLCKLSGLFGIRP*GYLAAQ
Trigger: CTGAGCTGCCAGATAACCTCAAGGCCTTATTCCGAA...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CCTCTCTGGCTTCAGCCCCTTCATGACGCAAATGCTCTCCATAACCAGCTTGACATAGTGATGTTGAGATaGGAGTTGCTCAGAGCACAG +
Preference number: 2 (lower is better)
Translates to: PLWLQPLHDANALHNQLDIVMLR*ELLRAQ
Trigger: CTGTGCTCTGAGCAACTCTCATCTCAACATCACTAT...GTCAAGCTGGTTATGGAGAGCATTTGCGTCATGAAGGGGCTGAAGCCAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CATTACCTCCTCCAGGTTAAAGTCGTTGGGAAGCTTGGAGAGTATATCCTGGGCACAATGCCAAGGAGTTaGTCTTGGAGACCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: HYLLQVKVVGKLGEYILGTMPRS*SWRPKG
Trigger: ACCCTTGGGTCTCCAAGATCAACTCCTTGGCATTGT...GCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTCTGGACTCATGGGTCTaGTTTCTGGGTGGGTCACAC +
Preference number: 2 (lower is better)
Translates to: SELVFSGTITSSQIFSNALDSWV*FLGGSH
Trigger: GTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAG...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp GACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCCCTTCATCCCGGGGTTaGAGGCGATATTCAGGATGG +
Preference number: 2 (lower is better)
Translates to: DLVLTGNQPFILALGPIIPSSRG*RRYSGW
Trigger: CCATCCTGAATATCGCCTGCAACCCCGGGATGAAGG...GATTATCGGGCCCAATGCCAAAATGAATGGTTGGTTTCCTGTAAGGACAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TGTCCTGGCCGCTGTTTGCATCTTTTCCACGAGGTCAGCCTTCTCATCTGCTGGTATAAGCTGATGTCTTaGCACCCATTGGATCTCCAA +
Preference number: 2 (lower is better)
Translates to: CPGRCLHLFHEVSLLICWYKLMS*HPLDLQ
Trigger: TTGGAGATCCAATGGGTGGCAAGACATCAGCTTATA...CCAGCAGATGAGAAGGCTGACCTCGTGGAAAAGATGCAAACAGCGGCCAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGGGTCTGCTTTCTGGGTaGGTCACACATAGAGCACCT +
Preference number: 2 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKGLLSG*VTHRAP
Trigger: AGGTGCTCTATGTGTGACCCACCCAGAAAGCAGACC...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACAACCCAGTGCTCCTTCTaGGTCACAAAAAGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: QRLELDTMMPLSTEKESTTQCSF*VTKSWA
Trigger: TGCCCAGCTTTTTGTGACCCAGAAGGAGCACTGGGT...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TGTCCTGGCCGCTGTTTGCATCTTTTCCACGAGGTCAGCCTTCTCATCTGCTGGTGCAAATGCTGGTATTaGTTTCCCGGTTTACATCCA +
Preference number: 2 (lower is better)
Translates to: CPGRCLHLFHEVSLLICWCKCWY*FPGLHP
Trigger: TGGATGTAAACCGGGAAACCAATACCAGCATTTGCA...CCAGCAGATGAGAAGGCTGACCTCGTGGAAAAGATGCAAACAGCGGCCAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTGTATCGTTTACCGCCTaGGCCATGAGTGATTTCCAG +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLVSFTA*AMSDFQ
Trigger: CTGGAAATCACTCATGGCCCAGGCGGTAAACGATAC...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTGATCATGCCTCAGTTTaGCCACCACATCACGAGCAT +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLDHASV*PPHHEH
Trigger: ATGCTCGTGATGTGGTGGCCAAACTGAGGCATGATC...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTGGACTCTGCAGATCCTaGAGATGTGCTCAATGGCAA +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLGLCRS*RCAQWQ
Trigger: TTGCCATTGAGCACATCTCCAGGATCTGCAGAGTCC...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp CTCAGCTTCCCTCGAACCAGCTCAACGATCTGTGCGATCTGGTCATaGCTCTTTTTCAGAAAGTCTGTAAGGGTGTCTTCAACTAGGGCT +
Preference number: 2 (lower is better)
Translates to: LSFPRTSSTICAIWS*LFFRKSVRVSSTRA
Trigger: AGCCCTAGTTGAAGACACCCTTACAGACTTTCTGAAAAAGAGCAATGACCAGATCGCACAGATCGTTGAGCTGGTTCGAGGGAAGCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp GCATCAAAGCAGCCATACAGTTGCCCCATTGTGATAGCCTTGGGGTaGATGATCTTGAACTCCACAGCAAACTCTTCCATCTGGTTGGCT +
Preference number: 2 (lower is better)
Translates to: ASKQPYSCPIVIALG*MILNSTANSSIWLA
Trigger: AGCCAACCAGATGGAAGAGTTTGCTGTGGAGTTCAAGATCATCAACCCCAAGGCTATCACAATGGGGCAACTGTATGGCTGCTTTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp CTCACAGCATCAAAGCAGCCATACAGTTGCCCCATTGTGATAGCCTaGGGGTTGATGATCTTGAACTCCACAGCAAACTCTTCCATCTGG +
Preference number: 2 (lower is better)
Translates to: LTASKQPYSCPIVIA*GLMILNSTANSSIW
Trigger: CCAGATGGAAGAGTTTGCTGTGGAGTTCAAGATCATCAACCCCAAGGCTATCACAATGGGGCAACTGTATGGCTGCTTTGATGCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ACATTTTTGGGAAGGTGGAGAAGGAAGTCATTGGTGATAGCTGATTaGCCAGTGCCTGTGGGACCCACGAACAATATCGGGATCTCATGG +
Preference number: 2 (lower is better)
Translates to: TFLGRWRRKSLVIAD*PVPVGPTNNIGISW
Trigger: CCATGAGATCCCGATATTGTTCGTGGGTCCCACAGGCACTGGCAAATCAGCTATCACCAATGACTTCCTTCTCCACCTTCCCAAAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp AACAGGGAGGGATCAGACCCTCTGAAAAACATCTGCCAGAGGTCAGGTCTCAGGCTAACTCCTAATTGGTaGTTTGGAAAACTCACTCGC +
Preference number: 2 (lower is better)
Translates to: NREGSDPLKNICQRSGLRLTPNW*FGKLTR
Trigger: GCGAGTGAGTTTTCCAAATCACCAATTAGGAGTTAG...CCTGAGACCTGACCTCTGGCAGATGTTTTTCAGAGGGTCTGATCCCTCCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR TCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGGCTCTTCCTCCTTGTTaGTCAACTCAAATTCTGTCA +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMALPPC*STQILS
Trigger: TGACAGAATTTGAGTTGATCAACAAGGAGGAAGAGC...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTTTGATCATCAGGGTTTaGAGAAGAGGGAAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLLIIRV*RRGKEL
Trigger: GAGCTCCTTCCCTCTTCTTCAAACCCTGATGATCAA...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACCAACGGAGCCTGGGATaGCCTTGTCCTTACAGGAAA +
Preference number: 2 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDQRSLG*PCPYRK
Trigger: TTTCCTGTAAGGACAAGGTCATCCCAGGCTCCGTTG...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CCACTTGTGAAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAAGTAGCGGTTCCAATGAGGTCCATCTCTaGCTGATCCCTCTTGCTCAT +
Preference number: 2 (lower is better)
Translates to: PLVKMQIPVSASLPSSGSNEVHL*LIPLAH
Trigger: ATGAGCAAGAGGGATCAGGCAGAGATGGACCTCATT...GGAACCGCTACTTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp AAGTGCTGGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTGAGTAAAAATCATAGATaGTTCCTCTTTCTGGGAAGA +
Preference number: 2 (lower is better)
Translates to: KCWHGLGQVSLTLILDRLSKNHR*FLFLGR
Trigger: TCTTCCCAGAAAGAGGAAGCATCTATGATTTTTACT...CAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACAACTGATAAGCTTCTCTaGCCTGACGAGCTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: QRLELDTMMPLSTEKESTTDKLL*PDELLG
Trigger: TCCCAGAAGCTCGTCAGGGCAGAGAAGCTTATCAGT...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TGTCCTGGCCGCTGTTTGCATCTTTTCCACGAGGTCAGCCTTCTCATCTGCTGGGCAGTCATCAAAAGTTaGGTTGAAGACAATAATGGG +
Preference number: 2 (lower is better)
Translates to: CPGRCLHLFHEVSLLICWAVIKS*VEDNNG
Trigger: CCCATTATTGTCTTCAACCCAACTTTTGATGACTGC...CCAGCAGATGAGAAGGCTGACCTCGTGGAAAAGATGCAAACAGCGGCCAGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACTCTCTGCTAAGCGCTTaGGCGCAGGCACATCGATCA +
Preference number: 2 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHSLLSA*AQAHRS
Trigger: TGATCGATGTGCCTGCGCCCAAGCGCTTAGCAGAGA...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CCAAGGAGAAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTGCTGGCTTGACAAATGAACCAGGGCACTaGCTGCAGCTTCATTTTTCT +
Preference number: 2 (lower is better)
Translates to: PRRKETGLAARGRSAGLTNEPGH*LQLHFS
Trigger: AGAAAAATGAAGCTGCAGCCAGTGCCCTGGTTCATT...TGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTCTCCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTTCTCTCCTTCTGTCCTaGCCGCTGTTTGCATCTTTT +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLSLLLS*PLFASF
Trigger: AAAAGATGCAAACAGCGGCCAGGACAGAAGGAGAGA...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGAGGCACGGATTTTTATaGGGTCCCCTAAGGTGTTGC +
Preference number: 2 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKRHGFL*GPLRCC
Trigger: GCAACACCTTAGGGGACCCCATAAAAATCCGTGCCT...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGATTTTGATCCCATTCTaGAGAATGCTGACGGGAAAC +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMILIPF*RMLTGN
Trigger: GTTTCCCGTCAGCATTCTCCAGAATGGGATCAAAAT...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TGTCTTCCAATAGAACATTGGCTTCCTGAAGCTTCTCAGTCATTCTaGGCTGGTCAGCTGCCACCATTACCCTTGTATCGTTTACCGCCT +
Preference number: 2 (lower is better)
Translates to: CLPIEHWLPEASQSF*AGQLPPLPLYRLPP
Trigger: AGGCGGTAAACGATACAAGGGTAATGGTGGCAGCTGACCAGCCAAGAATGACTGAGAAGCTTCAGGAAGCCAATGTTCTATTGGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ATGAGGTCTGATACCTTTGCATTCGCAGGAATAGTCTCCTCCTCCTaGGTGATATATTCTGTCCATGCATTCCAGTGTCCACCCCCTTGT +
Preference number: 2 (lower is better)
Translates to: MRSDTFAFAGIVSSS*VIYSVHAFQCPPPC
Trigger: ACAAGGGGGTGGACACTGGAATGCATGGACAGAATATATCACCAAGGAGGAGGAGACTATTCCTGCGAATGCAAAGGTATCAGACCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp GACCCATGGCAGTCACAAGCAGAACATCCACAATGTCCAGCCTGTTaGTGTCTTTCTTGTCAAACCAGTAGCCATGGTCAATCCATTGTC +
Preference number: 2 (lower is better)
Translates to: DPWQSQAEHPQCPAC*CLSCQTSSHGQSIV
Trigger: GACAATGGATTGACCATGGCTACTGGTTTGACAAGAAAGACACAAACAGGCTGGACATTGTGGATGTTCTGCTTGTGACTGCCATGGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ATTTGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATaGTCTGGGTTGCTTGGACCAGCATCTTCCCATACCGTAAGAACA +
Preference number: 2 (lower is better)
Translates to: IWRELARSSPLQLCK*SGLLGPASSHTVRT
Trigger: TGTTCTTACGGTATGGGAAGATGCTGGTCCAAGCAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TCTGCTGGGAAGATGTTGGGCACATCGCCTGTGTTCAGAAGCATGTaGATGTCTTCCACAAATGACTCATGCTTGATCTGGTTATCCGAG +
Preference number: 2 (lower is better)
Translates to: SAGKMLGTSPVFRSM*MSSTNDSCLIWLSE
Trigger: CTCGGATAACCAGATCAAGCATGAGTCATTTGTGGAAGACATCAACATGCTTCTGAACACAGGCGATGTGCCCAACATCTTCCCAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp AGGCCACACCTCCAGTTAAAAGGAAGTACCAAACTTCCTCATCAATaGCCTTTCTTTCCTTCAAGAGGCCAACGGTCAGAAGGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: RPHLQLKGSTKLPHQ*PFFPSRGQRSEGGR
Trigger: TCTCCCTCCTTCTGACCGTTGGCCTCTTGAAGGAAAGAAAGGCAATTGATGAGGAAGTTTGGTACTTCCTTTTAACTGGAGGTGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATaGTCCAAGGCCACACCTCCAGTTAAAAGGAAGTACCAAACTTCC +
Preference number: 2 (lower is better)
Translates to: HDFSDNHSGAGLGKG*SKATPPVKRKYQTS
Trigger: GGAAGTTTGGTACTTCCTTTTAACTGGAGGTGTGGCCTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ATGGATGGCTTTGTTGATCATATTGGCAGCAATAGGACCTTGGCCTaGACCAAGGGAGATGGTCTGTGTTTTAGTGCCTCCCATGCTAAC +
Preference number: 2 (lower is better)
Translates to: MDGFVDHIGSNRTLA*TKGDGLCFSASHAN
Trigger: GTTAGCATGGGAGGCACTAAAACACAGACCATCTCCCTTGGTCAAGGCCAAGGTCCTATTGCTGCCAATATGATCAACAAAGCCATCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp CTATTGAAGACTTCCTCCAGCTCTGAGGACATTAGGACTTGTCCTTaGATGGCTCGGCCAAGATCAATAAGGCTTCTGCGAACCACTTTG +
Preference number: 2 (lower is better)
Translates to: LLKTSSSSEDIRTCP*MARPRSIRLLRTTL
Trigger: CAAAGTGGTTCGCAGAAGCCTTATTGATCTTGGCCGAGCCATCAAAGGACAAGTCCTAATGTCCTCAGAGCTGGAGGAAGTCTTCAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp ATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCCAAACTGCAGGGCCAAACCACAGTTCTTTaGGTTTGTACATCATGGGAT +
Preference number: 2 (lower is better)
Translates to: IQLFSNVFQQDRGAKLQGQTTVL*VCTSWD
Trigger: ATCCCATGATGTACAAACTCAAAGAACTGTGGTTTG...GCCCTGCAGTTTGGCACCCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTTTCAAATCCAGAAGCTaGCTTTCCAGCTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SELVFSGTITSSQIFSNAFKSRS*LSSSSS
Trigger: GGAGCTGGAGCTGGAAAGTCAGCTTCTGGATTTGAA...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAGTACAGCCGCATCATTaGGAAGGCAAGGTGGATGGG +
Preference number: 2 (lower is better)
Translates to: MLFLASQRSPQTELSKRTVQPHH*EGKVDG
Trigger: CCCATCCACCTTGCCTTCTCAATGATGCGGCTGTAC...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTGATCATCCATGCCCATaGTCAGGTTGCGGAAAAATA +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLDHPCP*SGCGKI
Trigger: TATTTTTCCGCAACCTGATCATGGGCATGGATGATC...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGATGGGATTCACTGTGTaGAAATGCTCCTCATTCCAC +
Preference number: 2 (lower is better)
Translates to: WRELARSSPLQLCKLSGLMGFTV*KCSSFH
Trigger: GTGGAATGAGGAGCATTTGCACACAGTGAATCCCAT...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTCTCAAGCCGTTCACTTaGATCTCTGAGTTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: SELVFSGTITSSQIFSNALKPFT*ISELPP
Trigger: AGGAGGCAACTCAGAGATGCAAGTGAACGGCTTGAG...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACAAAGCAGCCATACAGTTaGCCCATTGTGATAGCCTTG +
Preference number: 2 (lower is better)
Translates to: QRLELDTMMPLSTEKESTKQPYS*PIVIAL
Trigger: CAAGGCTATCACAATGGGGCAACTGTATGGCTGCTT...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACTCAACCAGTTCTGTGTaGTCCTTAGTGAGACAGCGG +
Preference number: 2 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDSTSSV*SLVRQR
Trigger: CCGCTGTCTCACTAAGGAGCACACAGAACTGGTTGA...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CCAAGGAGAAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTGCTGGCTTGACATGGATGGGAGATGTTTaGACCACAAATTTGCAATGG +
Preference number: 2 (lower is better)
Translates to: PRRKETGLAARGRSAGLTWMGDV*TTNLQW
Trigger: CCATTGCAAATTTGTGGTGCAAACATCTCCCATCCA...TGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTCTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGGCCACACCTCCAGTTAAAAGGAGGTTTCTGTCACAGATaGTATTTCTTGCTTCTCAGA +
Preference number: 2 (lower is better)
Translates to: LELGWGKDCPRPHLQLKGGFCHR*YFLLLR
Trigger: TCTGAGAAGCAAGAAATAGCATCTGTGACAGAAACC...TCCTTTTAACTGGAGGTGTGGCCTTGGACAATCCTTTCCCCAACCCAGCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CCACTTGTGAAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAAGTAGCGGTTCCATGCTGAGAATCTGTTaGGCTACCACTGACAGTACT +
Preference number: 2 (lower is better)
Translates to: PLVKMQIPVSASLPSSGSMLRIC*ATTDST
Trigger: AGTACTGTCAGTGGTAGCCCAACAGATTCTCAGCAT...GGAACCGCTACTTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTCTGATAATGGCTTGCTaGATGCTGAGAATCTGTTGG +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLLIMAC*MLRICW
Trigger: CCAACAGATTCTCAGCATCCAGCAAGCCATTATCAG...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCCAAACTGCAGGGCAATAAGAGCATAATCTaGCACCATCATGGCTACTGT +
Preference number: 2 (lower is better)
Translates to: IQLFSNVFQQDRGAKLQGNKSII*HHHGYC
Trigger: ACAGTAGCCATGATGGTGCCAGATTATGCTCTTATT...GCCCTGCAGTTTGGCACCCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CCAAGGAGAAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTGCTGGCTTGACATTCGTAGTCTGGCTTTaGAAGAACAACTCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: PRRKETGLAARGRSAGLTFVVWL*KNNSRK
Trigger: TTTCCTGGAGTTGTTCTTCCAAAGCCAGACTACGAA...TGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTCTCCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGACTCTTCCATCTGGTTaGCTGCATGTAAATCACCCA +
Preference number: 2 (lower is better)
Translates to: WRELARSSPLQLCKLSGLTLPSG*LHVNHP
Trigger: TGGGTGATTTACATGCAGCCAACCAGATGGAAGAGT...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGTTCTTCACGCTCTCCTaGAAGTACTTGCACATGGAG +
Preference number: 2 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKFFTLS*KYLHME
Trigger: CTCCATGTGCAAGTACTTCCAGGAGAGCGTGAAGAA...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TTCATCCCGGGGTTGCAGGCGATATTCAGGATGGGAATATGCTGCTaGAACTTCTCAATCTTCAACTTGACATTCTCTGCTAAGCGCTTG +
Preference number: 2 (lower is better)
Translates to: FIPGLQAIFRMGICC*NFSIFNLTFSAKRL
Trigger: CAAGCGCTTAGCAGAGAATGTCAAGTTGAAGATTGAGAAGTTCAAGCAGCATATTCCCATCCTGAATATCGCCTGCAACCCCGGGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp CCAGAGCTGCAGCCAGAACTTTATAAGCTGATGTCTTGCCACCCATaGGATCTCCAACAATCATGTAGCCATGTCTTACCAGCATCATCT +
Preference number: 2 (lower is better)
Translates to: PELQPELYKLMSCHP*DLQQSCSHVLPASS
Trigger: AGATGATGCTGGTAAGACATGGCTACATGATTGTTGGAGATCCAATGGGTGGCAAGACATCAGCTTATAAAGTTCTGGCTGCAGCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TCCATCAAATATAATCCATTTGCGGTCATCAGTTATGGAAGACGCTaGTTCCCGGAAAGCATTGGCCAGGACACCATCTGTCCACTCATG +
Preference number: 2 (lower is better)
Translates to: SIKYNPFAVISYGRR*FPESIGQDTICPLM
Trigger: CATGAGTGGACAGATGGTGTCCTGGCCAATGCTTTCCGGGAACAAGCGTCTTCCATAACTGATGACCGCAAATGGATTATATTTGATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp GACTCATGCTTGATCTGGTTATCCGAGAAGAGGAACACAGTACTCTaGGTGGCCACTCCTGACTGCAACATTATCTTTTTCAGGTCCTCT +
Preference number: 2 (lower is better)
Translates to: DSCLIWLSEKRNTVL*VATPDCNIIFFRSS
Trigger: AGAGGACCTGAAAAAGATAATGTTGCAGTCAGGAGTGGCCACCAAGAGTACTGTGTTCCTCTTCTCGGATAACCAGATCAAGCATGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp CCTGTGTTCAGAAGCATGTTGATGTCTTCCACAAATGACTCATGCTaGATCTGGTTATCCGAGAAGAGGAACACAGTACTCTTGGTGGCC +
Preference number: 2 (lower is better)
Translates to: PVFRSMLMSSTNDSC*IWLSEKRNTVLLVA
Trigger: GGCCACCAAGAGTACTGTGTTCCTCTTCTCGGATAACCAGATCAAGCATGAGTCATTTGTGGAAGACATCAACATGCTTCTGAACACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TTCTCCAGTGAATTTTTCTTTCTGTTCATCAGTTCAAACTCGTCATaGAGATCTTGGAGTCGGTCTTCCACCAGCTTCAGCTCCGCCCGT +
Preference number: 2 (lower is better)
Translates to: FSSEFFFLFISSNSS*RSWSRSSTSFSSAR
Trigger: ACGGGCGGAGCTGAAGCTGGTGGAAGACCGACTCCAAGATCTCAATGACGAGTTTGAACTGATGAACAGAAAGAAAAATTCACTGGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp AGAATGAACAGCGACAGGCTTGTAGCCCATGCGGGTCTCATCAATTaGGGTTTCTGTCACAGATGCTATTTCTTGCTTCTCAGAGATCTC +
Preference number: 2 (lower is better)
Translates to: RMNSDRLVAHAGLIN*GFCHRCYFLLLRDL
Trigger: GAGATCTCTGAGAAGCAAGAAATAGCATCTGTGACAGAAACCCAAATTGATGAGACCCGCATGGGCTACAAGCCTGTCGCTGTTCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp ACTCATGACCTATTTAGGACAGATGCCAGACACAGGCTGCCTCTTGCTCAAACTCAGATGAGATTATGCTaGGTCCCAGTTTTGACTCAG +
Preference number: 2 (lower is better)
Translates to: THDLFRTDARHRLPLAQTQMRLC*VPVLTQ
Trigger: CTGAGTCAAAACTGGGACTCAGCATAATCTCATCTG...AGTTTGAGCAAGAGGCAGCCTGTGTCTGGCATCTGTCCTAAATAGGTCATGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR TCA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGTCCAGGAAACAGATCTaGGATAATGCCCTGAAACAG +
Preference number: 2 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKSRKQI*DNALKQ
Trigger: CTGTTTCAGGGCATTATCTCAGATCTGTTTCCTGGA...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTCACCTGGAGACAGTATaGAAATCAATGGTACGCAGC +
Preference number: 2 (lower is better)
Translates to: SELVFSGTITSSQIFSNAHLETV*KSMVRS
Trigger: GCTGCGTACCATTGATTTTCATACTGTCTCCAGGTG...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCAGGTCTCAGGATTCACTGGAGAGATGCCAATTGGAAGCCCTGTACTTTTCAAACACAGGCTGCCTCTTaGTCAAACTCAGGCTTGAAA +
Preference number: 2 (lower is better)
Translates to: SGLRIHWRDANWKPCTFQTQAAS*SNSGLK
Trigger: TTTCAAGCCTGAGTTTGAGCAAGAGGCAGCCTGTGT...TTGAAAAGTACAGGGCTTCCAATTGGCATCTCTCCAGTGAATCCTGAGACCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR GCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTTCTATTTCCATCTCCTaGTGCAACATCACATCCATC +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLSISIS*CNITSI
Trigger: GATGGATGTGATGTTGCAGCAGGAGATGGAAATAGA...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCCCTCGAACCAGCTCAACGATCTGTGCGATCTGGTCATTGCTCTTTTTCAGAATTCACTGGGCAAGTCTaGATAATCCATCAGGAACTC +
Preference number: 2 (lower is better)
Translates to: SLEPAQRSVRSGHCSFSEFTGQV*IIHQEL
Trigger: GAGTTCCTGATGGATTATGCAGACTTGCCCAGTGAA...TTCTGAAAAAGAGCAATGACCAGATCGCACAGATCGTTGAGCTGGTTCGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACAGTGGCCACTCCTGACTaGAACATTATCTTTTTCAGG +
Preference number: 2 (lower is better)
Translates to: QRLELDTMMPLSTEKESTVATPD*NIIFFR
Trigger: CCTGAAAAAGATAATGTTGCAGTCAGGAGTGGCCAC...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAGTTGTTCTGGACTCATaGGTCTGCTTTCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: MLFLASQRSPQTELSKRTVVLDS*VCFLGG
Trigger: CCCACCCAGAAAGCAGACCCATGAGTCCAGAACAAC...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CCAAGGAGAAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTGCTGGCTTGACATACAACCAAGTTACTTaGCATTTTAACCAGGCATCC +
Preference number: 2 (lower is better)
Translates to: PRRKETGLAARGRSAGLTYNQVT*HFNQAS
Trigger: GGATGCCTGGTTAAAATGCCAAGTAACTTGGTTGTA...TGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTCTCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACACTTCAGACACTTCTCTaGTCCAAAAGATGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: QRLELDTMMPLSTEKESTLQTLL*SKRWRR
Trigger: TCTCCTCCATCTTTTGGACCAGAGAAGTGTCTGAAG...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACTGCGGTCATCAGTTATaGAAGACGCTTGTTCCCGGA +
Preference number: 2 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHCGHQL*KTLVPG
Trigger: TCCGGGAACAAGCGTCTTCCATAACTGATGACCGCA...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGCCAAACAGCATCTACTaGTCCATCAAATATAATCCA +
Preference number: 2 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMPNSIY*SIKYNP
Trigger: TGGATTATATTTGATGGACCAGTAGATGCTGTTTGG...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTAGAAGGCAAGGTGGATaGGAGATGTTTGCACCACAA +
Preference number: 2 (lower is better)
Translates to: SELVFSGTITSSQIFSNARRQGG*EMFAPQ
Trigger: TTGTGGTGCAAACATCTCCCATCCACCTTGCCTTCT...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGACATTTTTGGGAAGGTaGAGAAGGAAGTCATTGGTG +
Preference number: 2 (lower is better)
Translates to: WRELARSSPLQLCKLSGLTFLGR*RRKSLV
Trigger: CACCAATGACTTCCTTCTCCACCTTCCCAAAAATGT...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ATATTCAGGATGGGAATATGCTGCTTGAACTTCTCAATCTTCAACTaGACATTCTCTGCTAAGCGCTTGGGCGCAGGCACATCGATCAAG +
Preference number: 2 (lower is better)
Translates to: IFRMGICCLNFSIFN*TFSAKRLGAGTSIK
Trigger: CTTGATCGATGTGCCTGCGCCCAAGCGCTTAGCAGAGAATGTCAAGTTGAAGATTGAGAAGTTCAAGCAGCATATTCCCATCCTGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ATGCTGGTATCCGTGTCCCTGTACTTCACGAAACTGAAGCACATATaGACCCAGTCTGCCTTCATCTTCTCCAAGTTTTTCTCCAGAGAA +
Preference number: 2 (lower is better)
Translates to: MLVSVSLYFTKLKHI*TQSAFIFSKFFSRE
Trigger: TTCTCTGGAGAAAAACTTGGAGAAGATGAAGGCAGACTGGGTCAATATGTGCTTCAGTTTCGTGAAGTACAGGGACACGGATACCAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGTTATTAGCTGAGGTATaGAGAAGTCCATCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: WRELARSSPLQLCKLSGLLLAEV*RSPSLG
Trigger: ACCAAGAGATGGACTTCTTCATACCTCAGCTAATAA...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACTTACCGCCTGGGCCATaGGTGATTTCCAGTAAGTAT +
Preference number: 2 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHLPPGP*VISSKY
Trigger: ATACTTACTGGAAATCACTCATGGCCCAGGCGGTAA...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACAAGAACATTGGCTTCCTaGAGCTTCTCAGTCATTCTT +
Preference number: 2 (lower is better)
Translates to: QRLELDTMMPLSTEKESTRTLAS*SFSVIL
Trigger: AAGAATGACTGAGAAGCTTCAGGAAGCCAATGTTCT...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGGATGTCTTCCACAAATaGCTCATGCTTGATCTGGTT +
Preference number: 2 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKDVFHK*LMLDLV
Trigger: AACCAGATCAAGCATGAGTCATTTGTGGAAGACATC...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGATTTCCATCTCCTGCTaGAACATCACATCCATCTGT +
Preference number: 2 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKISISC*NITSIC
Trigger: ACAGATGGATGTGATGTTGCAGCAGGAGATGGAAAT...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACACATGGAGACGACCTCTaGCCGAATGTTGTCATCAAG +
Preference number: 2 (lower is better)
Translates to: MLFLASQRSPQTELSKRTHGDDL*PNVVIK
Trigger: CTTGATGACAACATTCGGGCAGAGGTCGTCTCCATG...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACGCACTCTGCTTCTATTaGCTTGATGAACACGGAACC +
Preference number: 2 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHALCFY*LDEHGT
Trigger: GGTTCCGTGTTCATCAAGCCAATAGAAGCAGAGTGC...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATGTCTTGCCACCCATTGGATCTCCAACAATCATGTAGCCATGTCTTACCAGCAACAGGAAGAAGAACCTaGGGAAAAAGAGCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: MSCHPLDLQQSCSHVLPATGRRT*GKRASS
Trigger: AGAAGAGGCTCTTTTTCCCCAGGTTCTTCTTCCTGT...TGCTGGTAAGACATGGCTACATGATTGTTGGAGATCCAATGGGTGGCAAGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACAACGATCTGTGCGATCTaGTCATTGCTCTTTTTCAGA +
Preference number: 2 (lower is better)
Translates to: QRLELDTMMPLSTEKESTTICAI*SLLFFR
Trigger: TCTGAAAAAGAGCAATGACCAGATCGCACAGATCGT...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACAGAAAACTTCGTAGTCTaGCTTTGGAAGAACAACTCC +
Preference number: 2 (lower is better)
Translates to: QRLELDTMMPLSTEKESTENFVV*LWKNNS
Trigger: GGAGTTGTTCTTCCAAAGCCAGACTACGAAGTTTTC...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACAGCTCCGCCCGTTTCTaGTTCAGTTTTTGCATTTGG +
Preference number: 2 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHSSARF*FSFCIW
Trigger: CCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCT...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTACCCAGGTCCCTTCATaGATGGCTTTGTTGATCATA +
Preference number: 2 (lower is better)
Translates to: SELVFSGTITSSQIFSNATQVPS*MALLII
Trigger: TATGATCAACAAAGCCATCCATGAAGGGACCTGGGT...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp ACACTCTTGGGCCTTGGGTTACGATCATCCATGCCCATGATCAGGTaGCGGAAAAATACATCAAATTTCTTTCTGCTCTCAGCATTGATG +
Preference number: 2 (lower is better)
Translates to: TLLGLGLRSSMPMIR*RKNTSNFFLLSALM
Trigger: CATCAATGCTGAGAGCAGAAAGAAATTTGATGTATTTTTCCGCAACCTGATCATGGGCATGGATGATCGTAACCCAAGGCCCAAGAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TCAATAATATTTTCACCCAGTCTCATGTACTCCACCCCCTGCTGTTaGAATGTTGCCTTCAGCAAGATGGGTTCAATAAAGGCATCCAGC +
Preference number: 2 (lower is better)
Translates to: SIIFSPSLMYSTPCC*NVAFSKMGSIKASS
Trigger: GCTGGATGCCTTTATTGAACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACATGAGACTGGGTGAAAATATTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TTCGAAGAGGACAAAATTTTGATGGCTGTCTCATCTTCGAGGATGTaGCCCTCACACAGGGATAGGACCTCTAGAATCTTATCCTCAATC +
Preference number: 2 (lower is better)
Translates to: FEEDKILMAVSSSRM*PSHRDRTSRILSSI
Trigger: GATTGAGGATAAGATTCTAGAGGTCCTATCCCTGTGTGAGGGCAACATCCTCGAAGATGAGACAGCCATCAAAATTTTGTCCTCTTCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp GGAAGCCCTGTACTTTTCAAGAAAATGACTCATGACCTATTTAGGACAGATGCCCCAGGGCACAGTGAATaGGGGGAAAAGTTAACAGAT +
Preference number: 2 (lower is better)
Translates to: GSPVLFKKMTHDLFRTDAPGHSE*GEKLTD
Trigger: ATCTGTTAACTTTTCCCCTCATTCACTGTGCCCTGG...GGCATCTGTCCTAAATAGGTCATGAGTCATTTTCTTGAAAAGTACAGGGCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR TCA 90 bp AGTGAACCAACTTTCACAATCCAGGACATGGTGTTCATTGTGAATTCTGAGAACGTAGCCAGGGCACAGTaGATGAGGGGAAAAGTTAAC +
Preference number: 2 (lower is better)
Translates to: SEPTFTIQDMVFIVNSENVARAQ*MRGKVN
Trigger: GTTAACTTTTCCCCTCATTCACTGTGCCCTGGCTAC...GTTCTCAGAATTCACAATGAACACCATGTCCTGGATTGTGAAAGTTGGTTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR TCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTCATCTCTATGGATTTTaGAAAGTCTCTCCCTTTTCC +
Preference number: 2 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCHLYGF*KVSPFS
Trigger: GGAAAAGGGAGAGACTTTTCAAAATCCATAGAGATG...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR-3UTR TCA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGCAACAATGCTTTTCATaGGGCTATAGTAATAGTCAC +
Preference number: 2 (lower is better)
Translates to: WRELARSSPLQLCKLSGLQQCFS*GYSNSH
Trigger: GTGACTATTACTATAGCCTCATGAAAAGCATTGTTG...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGAACAGTTTCTTTTTCTaGGCTGATCATGCCCTTGAT +
Preference number: 2 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKNSFFF*ADHALD
Trigger: ATCAAGGGCATGATCAGCTCAGAAAAAGAAACTGTT...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TCTGTCATCATTGTCAATCAGGCGGTCATAAAAGACTCGGTAAACCTCATGGATCCACCTCAATCCTGTTaGATTCATCAAAACAGGCCC +
Preference number: 2 (lower is better)
Translates to: SVIIVNQAVIKDSVNLMDPPQSC*IHQNRP
Trigger: GGGCCTGTTTTGATGAATTCAACAGGATTGAGGTGG...ATCCATGAGGTTTACCGAGTCTTTTATGACCGCCTGATTGACAATGATGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTCTTTGTCGTATGTCTTaGGACTTTCCAAGAACTTTA +
Preference number: 2 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLLCRMS*DFPRTL
Trigger: TAAAGTTCTTGGAAAGTCTCAAGACATACGACAAAG...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CATTACCTCCTCCAGGTTAAAGTCGTTGGGAAGCTTGGAGAGTATATCCTGGGCGGTGATGTGCATGGATaGAATTTCATTTTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: HYLLQVKVVGKLGEYILGGDVHG*NFIFPL
Trigger: AAGAGGAAAAATGAAATTGCATCCATGCACATCACC...GCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp CCACTTGTGAAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAAGTAGCGGTTCCGATGTTGTTGTTCAATaGTTCCAGGAAAACTTCGTA +
Preference number: 2 (lower is better)
Translates to: PLVKMQIPVSASLPSSGSDVVVQ*FQENFV
Trigger: TACGAAGTTTTCCTGGAAGCATTGAACAACAACATC...GGAACCGCTACTTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp GACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCATCTACAAACACAACTaGTTTCTTCCCTATGGGAGG +
Preference number: 2 (lower is better)
Translates to: DLVLTGNQPFILALGPIIIYKHN*FLPYGR
Trigger: CCTCCCATAGGGAAGAAAGCAGTTGTGTTTGTAGAT...GATTATCGGGCCCAATGCCAAAATGAATGGTTGGTTTCCTGTAAGGACAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TATTTGTTCCATACCTACACACATGTGTTAGGGACAACTGGACAAAAACGTGACGGGATAGAGAAGAGATaGCCCAAGAGCCTTCTTCAC +
Preference number: 2 (lower is better)
Translates to: YLFHTYTHVLGTTGQKRDGIEKR*PKSLLH
Trigger: GTGAAGAAGGCTCTTGGGCCATCTCTTCTCTATCCC...GTCACGTTTTTGTCCAGTTGTCCCTAACACATGTGTGTAGGTATGGAACAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR CCA 90 bp TTAAGGCACATGGACAAATGCCTTAGGCAGGTGTCCTGTGCTTTGTCATATAGTTCCCTTCTCAGAACATaGCCAGAAGCACCTACAAAT +
Preference number: 2 (lower is better)
Translates to: LRHMDKCLRQVSCALSYSSLLRT*PEAPTN
Trigger: ATTTGTAGGTGCTTCTGGCCATGTTCTGAGAAGGGA...ACTATATGACAAAGCACAGGACACCTGCCTAAGGCATTTGTCCATGTGCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR CCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACAAGACATAATGTGATTTaGAGGGAGTTGGCAAGAAGT +
Preference number: 2 (lower is better)
Translates to: QRLELDTMMPLSTEKESTRHNVI*RELARS
Trigger: ACTTCTTGCCAACTCCCTCCAAATCACATTATGTCT...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp AGGAACTCAAGCCGTTCACTTGCATCTCTGAGTTGCCTCCTGAGCTaGAACACAGTGACATCACTGGATTTCTTTAAATATTCGATGAGT +
Preference number: 2 (lower is better)
Translates to: RNSSRSLASLSCLLS*NTVTSLDFFKYSMS
Trigger: ACTCATCGAATATTTAAAGAAATCCAGTGATGTCACTGTGTTCAAGCTCAGGAGGCAACTCAGAGATGCAAGTGAACGGCTTGAGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp CTCCTTGGTGATATATTCTGTCCATGCATTCCAGTGTCCACCCCCTaGTTTGAGGAAGTAAAAATCATAGATGCTTCCTCTTTCTGGGAA +
Preference number: 2 (lower is better)
Translates to: LLGDIFCPCIPVSTP*FEEVKIIDASSFWE
Trigger: TTCCCAGAAAGAGGAAGCATCTATGATTTTTACTTCCTCAAACAAGGGGGTGGACACTGGAATGCATGGACAGAATATATCACCAAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp AATGGTGCTGTACTGATTGCAAATGCTGGTATTGGTTTCCCGGTTTACATCCACCATCCTTATGTATCATaGAGAAAGAAACGAGGTCCC +
Preference number: 2 (lower is better)
Translates to: NGAVLIANAGIGFPVYIHHPYVS*RKKRGP
Trigger: GGGACCTCGTTTCTTTCTTCATGATACATAAGGATG...GTGGATGTAAACCGGGAAACCAATACCAGCATTTGCAATCAGTACAGCACCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TCAATGCTTCCAGGAAAACTTCGTAGTCTGGCTTTGGAAGAACAACTCCAGGAATTCTTGGAGAGGTCATaGAGCTTTTCCACATTGTTC +
Preference number: 2 (lower is better)
Translates to: SMLPGKLRSLALEEQLQEFLERS*SFSTLF
Trigger: GAACAATGTGGAAAAGCTTCATGACCTCTCCAAGAA...TTCCTGGAGTTGTTCTTCCAAAGCCAGACTACGAAGTTTTCCTGGAAGCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACATCATCGAGTATTAATTaGATGTCATCAACTGCACAC +
Preference number: 2 (lower is better)
Translates to: QRLELDTMMPLSTEKESTSSSIN*MSSTAH
Trigger: GTGTGCAGTTGATGACATTCAATTAATACTCGATGA...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGACATTGGCCAAGTATGTaGCATAAACCTCCAGGTTGT +
Preference number: 2 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGHWPSM*HKPPGC
Trigger: ACAACCTGGAGGTTTATGGCACATACTTGGCCAATG...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR-3UTR GCA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACTTCACTGTGTGCAAATaGTCCTCATTCCACTTCTTG +
Preference number: 2 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHFTVCK*SSFHFL
Trigger: CAAGAAGTGGAATGAGGAGCATTTGCACACAGTGAA...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTAAAGGCACGGTGATGTaGATGGATGCAATTTCATTT +
Preference number: 2 (lower is better)
Translates to: SELVFSGTITSSQIFSNAKGTVM*MDAISF
Trigger: AAATGAAATTGCATCCATGCACATCACCGTGCCTTT...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCAATGCTTCCAGGAAAACTTCGTAGTCTGGCTTTGGAAGAACAACTCCAGGAAATTCCCTATCTCCTCTaGGATTTGCTCAGCATTCAT +
Preference number: 2 (lower is better)
Translates to: SMLPGKLRSLALEEQLQEIPYLL*DLLSIH
Trigger: ATGAATGCTGAGCAAATCGCAGAGGAGATAGGGAAT...TTCCTGGAGTTGTTCTTCCAAAGCCAGACTACGAAGTTTTCCTGGAAGCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCAATGCTTCCAGGAAAACTTCGTAGTCTGGCTTTGGAAGAACAACTCCAGGAAGTGCGATCTGGTCATTaGTCTTTTTCAGAAAGTCTG +
Preference number: 2 (lower is better)
Translates to: SMLPGKLRSLALEEQLQEVRSGH*SFSESL
Trigger: CAGACTTTCTGAAAAAGAGCAATGACCAGATCGCAC...TTCCTGGAGTTGTTCTTCCAAAGCCAGACTACGAAGTTTTCCTGGAAGCATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTTCTGCTTCAGGACTCTaGAGATCCTGGAGATGTGCT +
Preference number: 2 (lower is better)
Translates to: FLASQRSPQTELSKRTKFSASGL*RSWRCA
Trigger: AGCACATCTCCAGGATCTGCAGAGTCCTGAAGCAGA...AAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTTTCTGGTTCAGTTTTTaGATTTGGATCTCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: SELVFSGTITSSQIFSNAFWFSF*IWISSF
Trigger: GAAGCTGGAGATCCAAATGCAAAAACTGAACCAGAA...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTCCTTGGCAGCCACAATaGCAAGGAGTTGATCTTGGA +
Preference number: 2 (lower is better)
Translates to: FLASQRSPQTELSKRTKFPWQPQ*QGVDLG
Trigger: TCCAAGATCAACTCCTTGGCATTGTGGCTGCCAAGG...AAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TCAATGCTTCCAGGAAAACTTCGTAGTCTGGCTTTGGAAGAACAACTCCAGGAATTGTCTTTAAGATTTTaGGCTCGCTCACAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: SMLPGKLRSLALEEQLQELSLRF*ARSQRS
Trigger: TGACCTCTGTGAGCGAGCCCAAAATCTTAAAGACAA...TTCCTGGAGTTGTTCTTCCAAAGCCAGACTACGAAGTTTTCCTGGAAGCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TCTGTCATCATTGTCAATCAGGCGGTCATAAAAGACTCGGTAAACCTCATGGATTTTCTTGCCCTCTTCTaGCATCTGGGCTATGATATC +
Preference number: 2 (lower is better)
Translates to: SVIIVNQAVIKDSVNLMDFLALF*HLGYDI
Trigger: GATATCATAGCCCAGATGCCAGAAGAGGGCAAGAAA...ATCCATGAGGTTTACCGAGTCTTTTATGACCGCCTGATTGACAATGATGACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACATTTTTAATGACAGCTaGCTGGAAATCAGGGTGATC +
Preference number: 2 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDIFNDS*LEIRVI
Trigger: GATCACCCTGATTTCCAGCCAGCTGTCATTAAAAAT...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp GCCAGTCAACAGCAGAGACACAGACTCAAGGGGTATGTATATACCTaGGGGATCCCATCAGAATTCTTAATAATTTCCAAGAAGGAATTC +
Preference number: 2 (lower is better)
Translates to: ASQQQRHRLKGYVYT*GIPSEFLIISKKEF
Trigger: GAATTCCTTCTTGGAAATTATTAAGAATTCTGATGGGATCCCCAAGGTATATACATACCCCTTGAGTCTGTGTCTCTGCTGTTGACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp AATGGTGCTGTACTGATTGCAAATGCTGGTATTGGTTTCCCGGTTTACATCCACACAAACCTGAGGTTTTaGAATTCTGCAAACCACAGT +
Preference number: 2 (lower is better)
Translates to: NGAVLIANAGIGFPVYIHTNLRF*NSANHS
Trigger: ACTGTGGTTTGCAGAATTTCAAAACCTCAGGTTTGT...GTGGATGTAAACCGGGAAACCAATACCAGCATTTGCAATCAGTACAGCACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACCTGTTCGAACAAACCTaGGGTTTTGAAATTCTGCAA +
Preference number: 2 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHLFEQT*GFEILQ
Trigger: TTGCAGAATTTCAAAACCTCAGGTTTGTTCGAACAG...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTCGGTTTACATCCACTTaGTACAGAATCAAATTGTCT +
Preference number: 2 (lower is better)
Translates to: SELVFSGTITSSQIFSNARFTST*YRIKLS
Trigger: AGACAATTTGATTCTGTATCAAGTGGATGTAAACCG...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TCTGTCATCATTGTCAATCAGGCGGTCATAAAAGACTCGGTAAACCTCATGGATCTTTGGCTGGCATGTTaGGATCATCTACAAACACAA +
Preference number: 2 (lower is better)
Translates to: SVIIVNQAVIKDSVNLMDLWLAC*DHLQTQ
Trigger: TTGTGTTTGTAGATGATCTCAACATGCCAGCCAAAG...ATCCATGAGGTTTACCGAGTCTTTTATGACCGCCTGATTGACAATGATGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TCTGTCATCATTGTCAATCAGGCGGTCATAAAAGACTCGGTAAACCTCATGGATCATACCGTAAGAACATaGCATCAAACCCTTTCCCAA +
Preference number: 2 (lower is better)
Translates to: SVIIVNQAVIKDSVNLMDHTVRT*HQTLSQ
Trigger: TTGGGAAAGGGTTTGATGTCATGTTCTTACGGTATG...ATCCATGAGGTTTACCGAGTCTTTTATGACCGCCTGATTGACAATGATGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACACATGACAGCCACTTGTaGAGATGCAAATTCCAGTTT +
Preference number: 2 (lower is better)
Translates to: MLFLASQRSPQTELSKRTHDSHL*RCKFQF
Trigger: AAACTGGAATTTGCATCTTCACAAGTGGCTGTCATG...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACAACTCAGATGGCTTCTaGTCTTTACTTTCTATTTCC +
Preference number: 2 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDNSDGF*SLLSIS
Trigger: GGAAATAGAAAGTAAAGAGCAGAAGCCATCTGAGTT...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTTCCTTCTCATCTGCCTaGACCAGAAGTTTCTTGGCA +
Preference number: 2 (lower is better)
Translates to: FLASQRSPQTELSKRTKFSFSSA*TRSFLA
Trigger: TGCCAAGAAACTTCTGGTGCAGGCAGATGAGAAGGA...AAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp GTCTGTATGAATGGAACAGTTTCTTTTTCTGAGCTGATCATGCCCTaGATTTCCAGATTGTCTGTAAACTCCAGTTTGGCAATTCCTTCG +
Preference number: 2 (lower is better)
Translates to: VCMNGTVSFSELIMP*ISRLSVNSSLAIPS
Trigger: CGAAGGAATTGCCAAACTGGAGTTTACAGACAATCTGGAAATCAAGGGCATGATCAGCTCAGAAAAAGAAACTGTTCCATTCATACAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TCAATAAACCTTTCCCGGATTCGCTTCATGATCACCGAAGGGATGTaGTCTTTGTCGTATGTCTTGAGACTTTCCAAGAACTTTAGATCT +
Preference number: 2 (lower is better)
Translates to: SINLSRIRFMITEGM*SLSYVLRLSKNFRS
Trigger: AGATCTAAAGTTCTTGGAAAGTCTCAAGACATACGACAAAGACAACATCCCTTCGGTGATCATGAAGCGAATCCGGGAAAGGTTTATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCTGTCATCATTGTCAATCAGGCGGTCATAAAAGACTCGGTAAACCTCATGGATTTCAGGATGGGAATATaGTGCTTGAACTTCTCAATC +
Preference number: 2 (lower is better)
Translates to: SVIIVNQAVIKDSVNLMDFRMGI*CLNFSI
Trigger: GATTGAGAAGTTCAAGCAGCATATTCCCATCCTGAA...ATCCATGAGGTTTACCGAGTCTTTTATGACCGCCTGATTGACAATGATGACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTCAGATCCTGGAGATGTaGTCAATGGCAAACTTGAAC +
Preference number: 2 (lower is better)
Translates to: FLASQRSPQTELSKRTKFQILEM*SMANLN
Trigger: GTTCAAGTTTGCCATTGAGCACATCTCCAGGATCTG...AAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTATCCATCTGTTGTTCTaGACTCATGGGTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: FLASQRSPQTELSKRTKFIHLLF*THGSAF
Trigger: GAAAGCAGACCCATGAGTCCAGAACAACAGATGGAT...AAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAGCTGTGAAATCCACTaGAAGTCATTTAGACTGTTG +
Preference number: 2 (lower is better)
Translates to: MLFLASQRSPQTELSKRTSCEIH*KSFRLL
Trigger: CAACAGTCTAAATGACTTCCAGTGGATTTCACAGCT...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTAGCTGTTTCTTATTCTaGGCACTTTCTAAAATCAAC +
Preference number: 2 (lower is better)
Translates to: SELVFSGTITSSQIFSNASCFLF*ALSKIN
Trigger: GTTGATTTTAGAAAGTGCCCAGAATAAGAAACAGCT...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp GTACTGATTGCAAATGCTGGTATTGGTTTCCCGGTTTACATCCACTaGATACAGAATCAAATTGTCTTTAAGATTTTGGGCTCGCTCACA +
Preference number: 2 (lower is better)
Translates to: VLIANAGIGFPVYIH*IQNQIVFKILGSLT
Trigger: TGTGAGCGAGCCCAAAATCTTAAAGACAATTTGATTCTGTATCAAGTGGATGTAAACCGGGAAACCAATACCAGCATTTGCAATCAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp GGGTATGTATATACCTTGGGGATCCCATCAGAATTCTTAATAATTTCCAAGAAGTTTCCATTGGGTCCATaGGGATGTAGTCAACAATGC +
Preference number: 2 (lower is better)
Translates to: GYVYTLGIPSEFLIISKKFPLGP*GCSQQC
Trigger: GCATTGTTGACTACATCCTCATGGACCCAATGGAAA...CTTCTTGGAAATTATTAAGAATTCTGATGGGATCCCCAAGGTATATACATACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAGCAGCTTCATTTTTCTaGTGTTGTTGTTCAATGCTT +
Preference number: 2 (lower is better)
Translates to: MLFLASQRSPQTELSKRTAASFF*CCCSML
Trigger: AAGCATTGAACAACAACATCAGAAAAATGAAGCTGC...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR TCA 90 bp TTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTTTTCCTTCACCAGGTTaGAGAAAGTCTGTCTGTCAT +
Preference number: 2 (lower is better)
Translates to: FLASQRSPQTELSKRTKFFPSPG*RKSVCH
Trigger: ATGACAGACAGACTTTCTTCAACCTGGTGAAGGAAA...AAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR GCA 90 bp TCTGTCATCATTGTCAATCAGGCGGTCATAAAAGACTCGGTAAACCTCATGGATGCTTATCAACAAATTTaGCGAATCCATATTCCAGCA +
Preference number: 2 (lower is better)
Translates to: SVIIVNQAVIKDSVNLMDAYQQI*RIHIPA
Trigger: TGCTGGAATATGGATTCGGCAAATTTGTTGATAAGC...ATCCATGAGGTTTACCGAGTCTTTTATGACCGCCTGATTGACAATGATGACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CCA 90 bp TCTGTCATCATTGTCAATCAGGCGGTCATAAAAGACTCGGTAAACCTCATGGATCATACAAGGCTTCTGTaGTTATCATTTGCACATGAA +
Preference number: 2 (lower is better)
Translates to: SVIIVNQAVIKDSVNLMDHTRLL*LSFAHE
Trigger: TTCATGTGCAAATGATAACCACAGAAGCCTTGTATG...ATCCATGAGGTTTACCGAGTCTTTTATGACCGCCTGATTGACAATGATGACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp GCAATAGAACTGAAAATTTTGGTTAAGATTTCATCTTCAAAGGCGTaGATGGAAATGATATTCAGATGGCGAGTGAATCGTCCAGTGATG +
Preference number: 2 (lower is better)
Translates to: AIELKILVKISSSKA*MEMIFRWRVNRPVM
Trigger: CATCACTGGACGATTCACTCGCCATCTGAATATCATTTCCATCAACGCCTTTGAAGATGAAATCTTAACCAAAATTTTCAGTTCTATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 90 bp TCAAACCCTTTCCCAAAATGCCAGTCAGCAATAGAACTGAAAATTTaGGTTAAGATTTCATCTTCAAAGGCGTTGATGGAAATGATATTC +
Preference number: 2 (lower is better)
Translates to: SNPFPKCQSAIELKI*VKISSSKALMEMIF
Trigger: GAATATCATTTCCATCAACGCCTTTGAAGATGAAATCTTAACCAAAATTTTCAGTTCTATTGCTGACTGGCATTTTGGGAAAGGGTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp CCAGCTGGTGGGCCTCCATGTAGATCATCCCACACCTaGTCACGGTGGCGGGGGAGGCCTGCTCCAGATCTG +
Preference number: 3 (lower is better)
Translates to: PAGGPPCRSSHT*SRWRGRPAPDL
Trigger: CAGATCTGGAGCAGGCCTCCCCCGCCACCGTGAGCAGGTGTGGGATGATCTACATGGAGGCCCACCAGCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp GTTCAGGGTGTCGAGGGCAGCAAGGGCAGCCTCAAGTaGTGGCATGGCCTCGGCCAGGTCTCCCTCACACTC +
Preference number: 3 (lower is better)
Translates to: VQGVEGSKGSLK*WHGLGQVSLTL
Trigger: GAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTTGAGGCTGCCCTTGCTGCCCTCGACACCCTGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp CAGGGTGTCGAGGGCAGCAAGGGCAGCCTCAAGTGCTaGCATGGCCTCGGCCAGGTCTCCCTCACACTCATT +
Preference number: 3 (lower is better)
Translates to: QGVEGSKGSLKC*HGLGQVSLTLI
Trigger: AATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTTGAGGCTGCCCTTGCTGCCCTCGACACCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp CAGGGCCTGGTGGGTTCTGCATGGACTTCACCAGCGTaGTGTCAGATGGGTTCAGGGTGTCGAGGGCAGCAA +
Preference number: 3 (lower is better)
Translates to: QGLVGSAWTSPA*CQMGSGCRGQQ
Trigger: TTGCTGCCCTCGACACCCTGAACCCATCTGACATCACGCTGGTGAAGTCCATGCAGAACCCACCAGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp GAGAGTATATCCTGGGCCAGCTCCTCAACCACTTCCTaGGGAGACTTCCCACTCCCTCCGGACTGTCTCGGC +
Preference number: 3 (lower is better)
Translates to: ESISWASSSTTS*GDFPLPPDCLG
Trigger: GCCGAGACAGTCCGGAGGGAGTGGGAAGTCTCCTCAGGAAGTGGTTGAGGAGCTGGCCCAGGATATACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp TGGGTTCTGCATGGACTTCACCAGCGTGATGTCAGATaGGTTCAGGGTGTCGAGGGCAGCAAGGGCAGCCTC +
Preference number: 3 (lower is better)
Translates to: WVLHGLHQRDVR*VQGVEGSKGSL
Trigger: GAGGCTGCCCTTGCTGCCCTCGACACCCTGAACCCATCTGACATCACGCTGGTGAAGTCCATGCAGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp GCTCCACGTCCTCCAGGAATTTGTTGGCCACCAACTCTAAGGCATCGGTTGGCCAAGAACTTGGCCAGGTaGACATCCAGCAAGGCCCGG +
Preference number: 3 (lower is better)
Translates to: APRPPGICWPPTLRHRLAKNLAR*TSSKAR
Trigger: CCGGGCCTTGCTGGATGTCAACCTGGCCAAGTTCTT...GGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp ATCATCCCACACCTGCTCACGGTGGCGGGGGAGGCCTaGTCCAGATCTGCTGGCTCAAAGATTAGACTCATC +
Preference number: 3 (lower is better)
Translates to: IIPHLLTVAGEA*SRSAGSKIRLI
Trigger: GATGAGTCTAATCTTTGAGCCAGCAGATCTGGAGCAGGCCTCCCCCGCCACCGTGAGCAGGTGTGGGATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp TCCCGGCAGTGCTTCTGGACCACCTCCTTGTACTCGTaGGGCAGCAAGGGCAACTTTCCAGCCAGTAAGTCT +
Preference number: 3 (lower is better)
Translates to: SRQCFWTTSLYS*GSKGNFPASKS
Trigger: AGACTTACTGGCTGGAAAGTTGCCCTTGCTGCCTCACGAGTACAAGGAGGTGGTCCAGAAGCACTGCCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp CTCCTTAGTGAGACAGCGGGGCAAAGTATCCATGTATaGGTCCTTCAAGGGCTTCCAGCCCAGCTGGTGGGC +
Preference number: 3 (lower is better)
Translates to: LLSETAGQSIHV*VLQGLPAQLVG
Trigger: GCCCACCAGCTGGGCTGGAAGCCCTTGAAGGACTCATACATGGATACTTTGCCCCGCTGTCTCACTAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp AGTAGCCATGGTCAATCCATTGTCTCAGCAGCTCGATaGGGGGCTGGGCTCCATACACCTCTTTGGCTGGCA +
Preference number: 3 (lower is better)
Translates to: SSHGQSIVSAAR*GAGLHTPLWLA
Trigger: TGCCAGCCAAAGAGGTGTATGGAGCCCAGCCCCCCATCGAGCTGCTGAGACAATGGATTGACCATGGCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp GATTTGCCAGTGCCTGTGGGACCCACGAACAATATCGGGATCTCATGGTCCAGGACTAGCTCCGCGGTATaGGCAGGGATCTCACTGACT +
Preference number: 3 (lower is better)
Translates to: DLPVPVGPTNNIGISWSRTSSAV*AGISLT
Trigger: AGTCAGTGAGATCCCTGCCAATACCGCGGAGCTAGT...CCTGGACCATGAGATCCCGATATTGTTCGTGGGTCCCACAGGCACTGGCAAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp TCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTaGGAGATGGCAGCAGCAGCATTAGCCTCCTTCTCA +
Preference number: 3 (lower is better)
Translates to: SARSPSHSFLIA*EMAAAALASFS
Trigger: TGAGAAGGAGGCTAATGCTGCTGCTGCCATCTCTCAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp CTCTCCATAACCAGCTTGACAGGGCCTGGTGGGTTCTaGATGGACTTCACCAGCGTGATGTCAGATGGGTTC +
Preference number: 3 (lower is better)
Translates to: LSITSLTGPGGF*MDFTSVMSDGF
Trigger: GAACCCATCTGACATCACGCTGGTGAAGTCCATGCAGAACCCACCAGGCCCTGTCAAGCTGGTTATGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp AGCTGGCACAGTGAGGCCACGCCTCGGTTTATCCAGTaGTTTTGGGGCATGTCTGTTGGTAGCTCAATGGAC +
Preference number: 3 (lower is better)
Translates to: SWHSEATPRFIQ*FWGMSVGSSMD
Trigger: GTCCATTGAGCTACCAACAGACATGCCCCAAAAGCACTGGATAAACCGAGGCGTGGCCTCACTGTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp CTGGTCCAAAAGATGGAGGAGACACAGATAACTACCTaGCCTGGCCACTCCAAGACCCAGGCATTACGAGGG +
Preference number: 3 (lower is better)
Translates to: LVQKMEETQITT*PGHSKTQALRG
Trigger: CCCTCGTAATGCCTGGGTCTTGGAGTGGCCAGGCCAGGTAGTTATCTGTGTCTCCTCCATCTTTTGGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp CGGAAAGCATTGGCCAGGACACCATCTGTCCACTCATaGCTCACAGCATCAAAGCAGCCATACAGTTGCCCC +
Preference number: 3 (lower is better)
Translates to: RKALARTPSVHS*LTASKQPYSCP
Trigger: GGGGCAACTGTATGGCTGCTTTGATGCTGTGAGCCATGAGTGGACAGATGGTGTCCTGGCCAATGCTTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp GACGCAAATGCTCTCCATAACCAGCTTGACAGGGCCTaGTGGGTTCTGCATGGACTTCACCAGCGTGATGTC +
Preference number: 3 (lower is better)
Translates to: DANALHNQLDRA*WVLHGLHQRDV
Trigger: GACATCACGCTGGTGAAGTCCATGCAGAACCCACCAGGCCCTGTCAAGCTGGTTATGGAGAGCATTTGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp TGTCTCGGCAGGGTCAGCAGCACTCCTTGGAAGAGCTaGTTGGTTTCCTGGTTGTCCTTGGTGATGTCAGCA +
Preference number: 3 (lower is better)
Translates to: CLGRVSSTPWKS*LVSWLSLVMSA
Trigger: TGCTGACATCACCAAGGACAACCAGGAAACCAACCAGCTCTTCCAAGGAGTGCTGCTGACCCTGCCGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp CACAGTGAGGCCACGCCTCGGTTTATCCAGTGCTTTTaGGGCATGTCTGTTGGTAGCTCAATGGACAGGACG +
Preference number: 3 (lower is better)
Translates to: HSEATPRFIQCF*GMSVGSSMDRT
Trigger: CGTCCTGTCCATTGAGCTACCAACAGACATGCCCCAAAAGCACTGGATAAACCGAGGCGTGGCCTCACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp TCTCGCATTTGTGACCCCTGCCATCAATTATCCAGCTaGCACAGTGAGGCCACGCCTCGGTTTATCCAGTGC +
Preference number: 3 (lower is better)
Translates to: SRICDPCHQLSS*HSEATPRFIQC
Trigger: GCACTGGATAAACCGAGGCGTGGCCTCACTGTGCCAGCTGGATAATTGATGGCAGGGGTCACAAATGCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp AAGTGCTGGCATGGCCTCGGCCAGGTCTCCCTCACACTCATTCTTGATCGCCTGTACTTAAGCTTCAGATaGCCTGCAGCTGTGAGCACA +
Preference number: 3 (lower is better)
Translates to: KCWHGLGQVSLTLILDRLYLSFR*PAAVST
Trigger: TGTGCTCACAGCTGCAGGCAATCTGAAGCTTAAGTA...CAGGCGATCAAGAATGAGTGTGAGGGAGACCTGGCCGAGGCCATGCCAGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp TCACAAAAAGCTGGGCACAGGTGGGGATCCATTTGGTaGGTAGAATATGACGCGCCTCCCGGCAGTGCTTCT +
Preference number: 3 (lower is better)
Translates to: SQKAGHRWGSIW*VEYDAPPGSAS
Trigger: AGAAGCACTGCCGGGAGGCGCGTCATATTCTACTCACCAAATGGATCCCCACCTGTGCCCAGCTTTTTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp CTCATTCTCCTCAGGGTACTTAAGCTTCAGATTGCCTaGAGCTGTGAGCACAGACTTGACAGCCCGCATGCC +
Preference number: 3 (lower is better)
Translates to: LILLRVLKLQIA*SCEHRLDSPHA
Trigger: GGCATGCGGGCTGTCAAGTCTGTGCTCACAGCTGCAGGCAATCTGAAGCTTAAGTACCCTGAGGAGAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp GCCATTGTCAACAGAGAAGGAGTCAACAGGAAGCCCTaGTATCTGCCAGGCACGGATTTTTATGGGGTCCCC +
Preference number: 3 (lower is better)
Translates to: AIVNREGVNRKP*YLPGTDFYGVP
Trigger: GGGGACCCCATAAAAATCCGTGCCTGGCAGATAGCAGGGCTTCCTGTTGACTCCTTCTCTGTTGACAATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp AGTCGGTCTTCCACCAGCTTCAGCTCCGCCCGTTTCTaGTTCAGTTTTTGCATTTGGATCTCCAGCTTCCCC +
Preference number: 3 (lower is better)
Translates to: SRSSTSFSSARF*FSFCIWISSFP
Trigger: GGGGAAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTGGTGGAAGACCGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATCTGCCAGAGGTCAGGTCTCAGGATTCACTGGAGAGATGCCAATTGGAAGCCCGACACAGGCTGCCTCTaGCTCAAACTCAGGCTTGAA +
Preference number: 3 (lower is better)
Translates to: ICQRSGLRIHWRDANWKPDTGCL*LKLRLE
Trigger: TTCAAGCCTGAGTTTGAGCAAGAGGCAGCCTGTGTC...GGGCTTCCAATTGGCATCTCTCCAGTGAATCCTGAGACCTGACCTCTGGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR CAA 90 bp CCAAGGAGAAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTGCTGGCTTGACATCCAGAGAATACTCCTaGCTGGCAGCTGCCCCAATG +
Preference number: 3 (lower is better)
Translates to: PRRKETGLAARGRSAGLTSREYS*LAAAPM
Trigger: CATTGGGGCAGCTGCCAGCAAGGAGTATTCTCTGGA...TGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTCTCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp GCTCCACGTCCTCCAGGAATTTGTTGGCCACCAACTCTAAGGCATCGGTTGGCCCTTCCTGATAATGGCTaGCTGGATGCTGAGAATCTG +
Preference number: 3 (lower is better)
Translates to: APRPPGICWPPTLRHRLALPDNG*LDAENL
Trigger: CAGATTCTCAGCATCCAGCAAGCCATTATCAGGAAG...GGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TGTCCTGGCCGCTGTTTGCATCTTTTCCACGAGGTCAGCCTTCTCATCTGCTGGGCTCCATACACCTCTTaGGCTGGCATGTTGAGATCA +
Preference number: 3 (lower is better)
Translates to: CPGRCLHLFHEVSLLICWAPYTS*AGMLRS
Trigger: TGATCTCAACATGCCAGCCAAAGAGGTGTATGGAGC...CCAGCAGATGAGAAGGCTGACCTCGTGGAAAAGATGCAAACAGCGGCCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp GATTTCATCCAGCAGGGAGGAGTACAGCCGCATCATTaGGAAGGCAAGGTGGATGGGAGATGTTTGCACCAC +
Preference number: 3 (lower is better)
Translates to: DFIQQGGVQPHH*EGKVDGRCLHH
Trigger: GTGGTGCAAACATCTCCCATCCACCTTGCCTTCTCAATGATGCGGCTGTACTCCTCCCTGCTGGATGAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp CTGCCGGGCAGTCTCCATTGTGGGAATGATGAGGTCTaGTACCTTTGCATTCGCAGGAATAGTCTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: LPGSLHCGNDEV*YLCIRRNSLLL
Trigger: GAGGAGGAGACTATTCCTGCGAATGCAAAGGTATCAGACCTCATCATTCCCACAATGGAGACTGCCCGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp TTCCTGAAGCTTCTCAGTCATTCTTGGCTGGTCAGCTaGCACCATTACCCTTGTATCGTTTACCGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: FLKLLSHSWLVS*HHYPCIVYRLG
Trigger: GCCCAGGCGGTAAACGATACAAGGGTAATGGTGGCAGCTGACCAGCCAAGAATGACTGAGAAGCTTCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp AGCCGGATAAATTTTTCCAAATCCTGTAGGTGGGTGTaGGGACACAGCAGTACTCCCTGGATCACCCGTGAG +
Preference number: 3 (lower is better)
Translates to: SRINFSKSCRWV*GHSSTPWITRE
Trigger: CTCACGGGTGATCCAGGGAGTACTGCTGTGTCCCCACACCCACCTACAGGATTTGGAAAAATTTATCCGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp TGTTGTCATCAAGCTCCACGTCCTCCAGGAATTTGTTaGCCACCAACTCTAAGGCATCGGTTGGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: CCHQAPRPPGIC*PPTLRHRLART
Trigger: AGTCCTGGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGCTTGATGACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGAGTTGCCTCCTGAGCTaGAACACAGTGACATCACTG +
Preference number: 3 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMSCLLS*NTVTSL
Trigger: CAGTGATGTCACTGTGTTCAAGCTCAGGAGGCAACT...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CCAAGGAGAAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTGCTGGCTTGACAAGTACAGCCGCATCATaGAGAAGGCAAGGTGGATGG +
Preference number: 3 (lower is better)
Translates to: PRRKETGLAARGRSAGLTSTAAS*RRQGGW
Trigger: CCATCCACCTTGCCTTCTCAATGATGCGGCTGTACT...TGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTCTCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCCAAACTGCAGGGCGAAAAGAAACAGGCCTaGCAGCCAGAGGAAGATCTG +
Preference number: 3 (lower is better)
Translates to: IQLFSNVFQQDRGAKLQGEKKQA*QPEEDL
Trigger: CAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTC...GCCCTGCAGTTTGGCACCCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CCACTTGTGAAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAAGTAGCGGTTCCCTCCGACGGTCCAGCTaGGACATGATGATATCCTGG +
Preference number: 3 (lower is better)
Translates to: PLVKMQIPVSASLPSSGSLRRSS*DMMISW
Trigger: CCAGGATATCATCATGTCCAAGCTGGACCGTCGGAG...GGAACCGCTACTTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TGTCCTGGCCGCTGTTTGCATCTTTTCCACGAGGTCAGCCTTCTCATCTGCTGGAATTGTCTGGGTTGCTaGGACCAGCATCTTCCCATA +
Preference number: 3 (lower is better)
Translates to: CPGRCLHLFHEVSLLICWNCLGC*DQHLPI
Trigger: TATGGGAAGATGCTGGTCCAAGCAACCCAGACAATT...CCAGCAGATGAGAAGGCTGACCTCGTGGAAAAGATGCAAACAGCGGCCAGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTAGGAACACAGTACTCTaGGTGGCCACTCCTGACTGC +
Preference number: 3 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLRNTVL*VATPDC
Trigger: GCAGTCAGGAGTGGCCACCAAGAGTACTGTGTTCCT...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTACCTCTGCCCGAATGTaGTCATCAAGCTCCACGTCC +
Preference number: 3 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLTSARM*SSSSTS
Trigger: GGACGTGGAGCTTGATGACAACATTCGGGCAGAGGT...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGCCCTTCTCTGCCATGTaGTCCAGCAAGTCATCATAT +
Preference number: 3 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMPFSAM*SSKSSY
Trigger: ATATGATGACTTGCTGGACAACATGGCAGAGAAGGG...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TGTCCTGGCCGCTGTTTGCATCTTTTCCACGAGGTCAGCCTTCTCATCTGCTGGATTGTCTTTAAGATTTaGGGCTCGCTCACAGAGGTC +
Preference number: 3 (lower is better)
Translates to: CPGRCLHLFHEVSLLICWIVFKI*GSLTEV
Trigger: GACCTCTGTGAGCGAGCCCAAAATCTTAAAGACAAT...CCAGCAGATGAGAAGGCTGACCTCGTGGAAAAGATGCAAACAGCGGCCAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTAAACAGGGGGACATCTaGAGCCAAGAACTTGGCCAG +
Preference number: 3 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLKQGDI*SQELGQ
Trigger: CTGGCCAAGTTCTTGGCTCAAGATGTCCCCCTGTTT...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp GATTTGCCAGTGCCTGTGGGACCCACGAACAATATCGGGATCTCATGGTCCAGGATGTCTTGCCACCCATaGGATCTCCAACAATCATGT +
Preference number: 3 (lower is better)
Translates to: DLPVPVGPTNNIGISWSRMSCHP*DLQQSC
Trigger: ACATGATTGTTGGAGATCCAATGGGTGGCAAGACAT...CCTGGACCATGAGATCCCGATATTGTTCGTGGGTCCCACAGGCACTGGCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGCCCATTGTGATAGCCTaGGGGTTGATGATCTTGAAC +
Preference number: 3 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMPIVIA*GLMILN
Trigger: GTTCAAGATCATCAACCCCAAGGCTATCACAATGGG...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACATGTTCCCGGAAAGCATaGGCCAGGACACCATCTGTC +
Preference number: 3 (lower is better)
Translates to: QRLELDTMMPLSTEKESTCSRKA*ARTPSV
Trigger: GACAGATGGTGTCCTGGCCAATGCTTTCCGGGAACA...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CCACTTGTGAAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAAGTAGCGGTTCCTCACACTCTTGGGCCTaGGGTTACGATCATCCATGC +
Preference number: 3 (lower is better)
Translates to: PLVKMQIPVSASLPSSGSSHSWA*GYDHPC
Trigger: GCATGGATGATCGTAACCCAAGGCCCAAGAGTGTGA...GGAACCGCTACTTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGTGTAAATTGTCTGGGTaGCTTGGACCAGCATCTTCC +
Preference number: 3 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMCKLSG*LGPASS
Trigger: GGAAGATGCTGGTCCAAGCAACCCAGACAATTTACA...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp TCTCTGTGGGCTTTATCTCATAGCCAACAATGTCACTaGTCTGTTGCCAGTGCCGATCCTTCATCCCGGGGT +
Preference number: 3 (lower is better)
Translates to: SLWALSHSQQCH*SVASADPSSRG
Trigger: ACCCCGGGATGAAGGATCGGCACTGGCAACAGATCAGTGACATTGTTGGCTATGAGATAAAGCCCACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp GGACTGGAACCAATCAATGGTGCAGCAGTTGATAAGTaGCGGGAACATTCTCAGGCGGGTTCTGAAGGCATC +
Preference number: 3 (lower is better)
Translates to: GLEPINGAAVDK*REHSQAGSEGI
Trigger: GATGCCTTCAGAACCCGCCTGAGAATGTTCCCGTCACTTATCAACTGCTGCACCATTGATTGGTTCCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp GAGAACAGGGAGGGATCAGACCCTCTGAAAAACATCTaGCAGAGGTCAGGTCTCAGGATTCACTGGAGAGAT +
Preference number: 3 (lower is better)
Translates to: ENREGSDPLKNI*QRSGLRIHWRD
Trigger: ATCTCTCCAGTGAATCCTGAGACCTGACCTCTGGCAGATGTTTTTCAGAGGGTCTGATCCCTCCCTGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR GCA 72 bp ACAAGCCACGTGAACATGTCCTCAACCAGTTCTGTGTaGTCCTTAGTGAGACAGCGGGGCAAAGTATCCATG +
Preference number: 3 (lower is better)
Translates to: TSHVNMSSTSSV*SLVRQRGKVSM
Trigger: CATGGATACTTTGCCCCGCTGTCTCACTAAGGAGCACACAGAACTGGTTGAGGACATGTTCACGTGGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp TGGCTGCAGAATGAACAGCGACAGGCTTGTAGCCCATaGGGGTCTCATCAATTTGGGTTTCTGTCACAGATG +
Preference number: 3 (lower is better)
Translates to: WLQNEQRQACSP*GSHQFGFLSQM
Trigger: CATCTGTGACAGAAACCCAAATTGATGAGACCCGCATGGGCTACAAGCCTGTCGCTGTTCATTCTGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp GATTCACTGTGTGCAAATGCTCCTCATTCCACTTCTTaGTACTCTGGTAGATGTTGTGCCAGGGCACAGGGG +
Preference number: 3 (lower is better)
Translates to: DSLCANAPHSTS*YSGRCCARAQG
Trigger: CCCCTGTGCCCTGGCACAACATCTACCAGAGTACCAAGAAGTGGAATGAGGAGCATTTGCACACAGTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp CTAAGCGCTTGGGCGCAGGCACATCGATCAAGGTCTTaGTCAACTTGTAGGTTGTCCTCCACATATTCCCTA +
Preference number: 3 (lower is better)
Translates to: LSAWAQAHRSRS*STCRLSSTYSL
Trigger: TAGGGAATATGTGGAGGACAACCTACAAGTTGACCAAGACCTTGATCGATGTGCCTGCGCCCAAGCGCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp AGGTGGATGGGAGATGTTTGCACCACAAATTTGCAATaGAGCCGACTAAAGTCCAGACAGGGCTGCACAAGC +
Preference number: 3 (lower is better)
Translates to: RWMGDVCTTNLQ*SRLKSRQGCTS
Trigger: GCTTGTGCAGCCCTGTCTGGACTTTAGTCGGCTCCATTGCAAATTTGTGGTGCAAACATCTCCCATCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp TTGGCCACCAACTCTAAGGCATCGGTTGGCCAGGACTaGAACCAATCAATGGTGCAGCAGTTGATAAGTGAC +
Preference number: 3 (lower is better)
Translates to: LATNSKASVGQD*NQSMVQQLISD
Trigger: GTCACTTATCAACTGCTGCACCATTGATTGGTTCCAGTCCTGGCCAACCGATGCCTTAGAGTTGGTGGCCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CCAAGGAGAAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTGCTGGCTTGACAACAGTGGTAAATTTCTaGCCCTCTTCTGGCATCTGG +
Preference number: 3 (lower is better)
Translates to: PRRKETGLAARGRSAGLTTVVNF*PSSGIW
Trigger: CCAGATGCCAGAAGAGGGCAAGAAATTTACCACTGT...TGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTCTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACGCTTCTCAGTCATTCTaGGCTGGTCAGCTGCCACCA +
Preference number: 3 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDASQSF*AGQLPP
Trigger: TGGTGGCAGCTGACCAGCCAAGAATGACTGAGAAGC...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CATTACCTCCTCCAGGTTAAAGTCGTTGGGAAGCTTGGAGAGTATATCCTGGGCCCAGGAGCTCATCATTaGACAGGAAGAAGAACCTGG +
Preference number: 3 (lower is better)
Translates to: HYLLQVKVVGKLGEYILGPGAHH*TGRRTW
Trigger: CCAGGTTCTTCTTCCTGTCAAATGATGAGCTCCTGG...GCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp GATTTGCCAGTGCCTGTGGGACCCACGAACAATATCGGGATCTCATGGTCCAGGCCCTTGATTTCCAGATaGTCTGTAAACTCCAGTTTG +
Preference number: 3 (lower is better)
Translates to: DLPVPVGPTNNIGISWSRPLISR*SVNSSL
Trigger: CAAACTGGAGTTTACAGACAATCTGGAAATCAAGGG...CCTGGACCATGAGATCCCGATATTGTTCGTGGGTCCCACAGGCACTGGCAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATCTGCGAGGTTGACCTGTCCCAACGGGCACCCTCAAGGAAAAGTCCTTTGATGAATTGTGTCCACCTCTaGTCTCTTGCTATTCAGGAG +
Preference number: 3 (lower is better)
Translates to: ICEVDLSQRAPSRKSPLMNCVHL*SLAIQE
Trigger: CTCCTGAATAGCAAGAGACAAGAGGTGGACACAATT...CATCAAAGGACTTTTCCTTGAGGGTGCCCGTTGGGACAGGTCAACCTCGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CATTACCTCCTCCAGGTTAAAGTCGTTGGGAAGCTTGGAGAGTATATCCTGGGCAGGAGACGCCTATCTTaGTCATCAGTCACTCTGCCT +
Preference number: 3 (lower is better)
Translates to: HYLLQVKVVGKLGEYILGRRRLS*SSVTLP
Trigger: AGGCAGAGTGACTGATGACAAAGATAGGCGTCTCCT...GCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp GTGCTACTAGCTCCGCGGTATTGGCAGGGATCTCACTaGCTTTGTCAGCAATGGTGCTGTACTGATTGCAAA +
Preference number: 3 (lower is better)
Translates to: VLLAPRYWQGSH*LCQQWCCTDCK
Trigger: TTTGCAATCAGTACAGCACCATTGCTGACAAAGTCAGTGAGATCCCTGCCAATACCGCGGAGCTAGTAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp AAGGGCAGTGAGCTCTACCTGCATGACAGCCACTTGTaGAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAA +
Preference number: 3 (lower is better)
Translates to: KGSELYLHDSHL*RCKFQFLQACQ
Trigger: TTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGGCTGTCATGCAGGTAGAGCTCACTGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp ACATCACATCCATCTGTTGTTCTGGACTCATGGGTCTaGTTTCTGGGTGGGTCACACATAGAGCACCTTGCT +
Preference number: 3 (lower is better)
Translates to: TSHPSVVLDSWV*FLGGSHIEHLA
Trigger: AGCAAGGTGCTCTATGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGATGGATGTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp AATTTGCAATGGAGCCGACTAAAGTCCAGACAGGGCTaGACAAGCCACGTGAACATGTCCTCAACCAGTTCT +
Preference number: 3 (lower is better)
Translates to: NLQWSRLKSRQG*TSHVNMSSTSS
Trigger: AGAACTGGTTGAGGACATGTTCACGTGGCTTGTGCAGCCCTGTCTGGACTTTAGTCGGCTCCATTGCAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp ATCTGTTGTTCTGGACTCATGGGTCTGCTTTCTGGGTaGGTCACACATAGAGCACCTTGCTTCCATCCAATC +
Preference number: 3 (lower is better)
Translates to: ICCSGLMGLLSG*VTHRAPCFHPI
Trigger: GATTGGATGGAAGCAAGGTGCTCTATGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp ATTCCTCAATGTTCCGAGAGGAGTCATAGTCATTCTTaGGAGCGAAGTGAACCCAGTGCTCCTTCTGGGTCA +
Preference number: 3 (lower is better)
Translates to: IPQCSERSHSHS*ERSEPSAPSGS
Trigger: TGACCCAGAAGGAGCACTGGGTTCACTTCGCTCCCAAGAATGACTATGACTCCTCTCGGAACATTGAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp TCTCCAGAGAATACTCCTTGCTGGCAGCTGCCCCAATaGGCTCCAGCTTATCAACAAATTTGCCGAATCCAT +
Preference number: 3 (lower is better)
Translates to: SPENTPCWQLPQ*APAYQQICRIH
Trigger: ATGGATTCGGCAAATTTGTTGATAAGCTGGAGCCCATTGGGGCAGCTGCCAGCAAGGAGTATTCTCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp AGGGAGGAGTACAGCCGCATCATTGAGAAGGCAAGGTaGATGGGAGATGTTTGCACCACAAATTTGCAATGG +
Preference number: 3 (lower is better)
Translates to: REEYSRIIEKAR*MGDVCTTNLQW
Trigger: CCATTGCAAATTTGTGGTGCAAACATCTCCCATCCACCTTGCCTTCTCAATGATGCGGCTGTACTCCTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp CTTGACAGACCTTCATATATCTCCATTTCCTCCTCCTaGATGTCCCGGATTTCATCCAGCAGGGAGGAGTAC +
Preference number: 3 (lower is better)
Translates to: LDRPSYISISSS*MSRISSSREEY
Trigger: GTACTCCTCCCTGCTGGATGAAATCCGGGACATCCAGGAGGAGGAAATGGAGATATATGAAGGTCTGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp ATAGCTTCTTCACGCTCTCCTGGAAGTACTTGCACATaGAGACGACCTCTGCCCGAATGTTGTCATCAAGCT +
Preference number: 3 (lower is better)
Translates to: IASSRSPGSTCT*RRPLPECCHQA
Trigger: AGCTTGATGACAACATTCGGGCAGAGGTCGTCTCCATGTGCAAGTACTTCCAGGAGAGCGTGAAGAAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTGTCTGGAAAGGCCATTaGGAAATGGCCAACCTAGGA +
Preference number: 3 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCVWKGH*EMANLG
Trigger: TCCTAGGTTGGCCATTTCCAAATGGCCTTTCCAGAC...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR-3UTR CAA 90 bp CCTCTCTGGCTTCAGCCCCTTCATGACGCAAATGCTCTCCATAACCAGCTTGACAGCAGCTCTTCCTCCTaGTTGATCAACTCAAATTCT +
Preference number: 3 (lower is better)
Translates to: PLWLQPLHDANALHNQLDSSSSS*LINSNS
Trigger: AGAATTTGAGTTGATCAACAAGGAGGAAGAGCTGCT...GTCAAGCTGGTTATGGAGAGCATTTGCGTCATGAAGGGGCTGAAGCCAGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CCAAGGAGAAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTGCTGGCTTGACATGGTCAACTTGTAGGTaGTCCTCCACATATTCCCTA +
Preference number: 3 (lower is better)
Translates to: PRRKETGLAARGRSAGLTWSTCR*SSTYSL
Trigger: TAGGGAATATGTGGAGGACAACCTACAAGTTGACCA...TGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTCTCCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACATTCTCTGCTAAGCGCTaGGGCGCAGGCACATCGATC +
Preference number: 3 (lower is better)
Translates to: MLFLASQRSPQTELSKRTFSAKR*GAGTSI
Trigger: GATCGATGTGCCTGCGCCCAAGCGCTTAGCAGAGAA...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp GTGATAGCCTTGGGGTTGATGATCTTGAACTCCACAGCAAACTCTTCCATCTGGGTTCGGAATAAGGCCTaGAGGTTATCTGGCAGCTCA +
Preference number: 3 (lower is better)
Translates to: VIALGLMILNSTANSSIWVRNKA*RLSGSS
Trigger: TGAGCTGCCAGATAACCTCAAGGCCTTATTCCGAAC...CCAGATGGAAGAGTTTGCTGTGGAGTTCAAGATCATCAACCCCAAGGCTATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp GCTCCACGTCCTCCAGGAATTTGTTGGCCACCAACTCTAAGGCATCGGTTGGCCTTCATTTTTCTGATGTaGTTGTTCAATGCTTCCAGG +
Preference number: 3 (lower is better)
Translates to: APRPPGICWPPTLRHRLAFIFLM*LFNASR
Trigger: CCTGGAAGCATTGAACAACAACATCAGAAAAATGAA...GGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACGCCATGGTCAATCCATaGTCTCAGCAGCTCGATGGG +
Preference number: 3 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHAMVNP*SQQLDG
Trigger: CCCATCGAGCTGCTGAGACAATGGATTGACCATGGC...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGAAAGACATGGGGGCCTaGCTGACACTGTTGAACTCA +
Preference number: 3 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKKDMGA*LTLLNS
Trigger: TGAGTTCAACAGTGTCAGCAAGGCCCCCATGTCTTT...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp TTTGGGAAGGTGGAGAAGGAAGTCATTGGTGATAGCTaGTTTGCCAGTGCCTGTGGGACCCACGAACAATAT +
Preference number: 3 (lower is better)
Translates to: FGKVEKEVIGDS*FASACGTHEQY
Trigger: ATATTGTTCGTGGGTCCCACAGGCACTGGCAAATCAGCTATCACCAATGACTTCCTTCTCCACCTTCCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp CGAGAAGAGGAACACAGTACTCTTGGTGGCCACTCCTaGCTGCAACATTATCTTTTTCAGGTCCTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: REEEHSTLGGHS*LQHYLFQVLSP
Trigger: TGGAGAGAGGACCTGAAAAAGATAATGTTGCAGTCAGGAGTGGCCACCAAGAGTACTGTGTTCCTCTTCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp CCCACATGGCTGGCACTTTACCCACAAGCATACTATTaGAGACTTCCTCCAGCTCTGAGGACATTAGGACTT +
Preference number: 3 (lower is better)
Translates to: PTWLALYPQAYY*RLPPALRTLGL
Trigger: AAGTCCTAATGTCCTCAGAGCTGGAGGAAGTCTTCAATAGTATGCTTGTGGGTAAAGTGCCAGCCATGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp ACTGCTCAGCTTCCCTCGAACCAGCTCAACGATCTGTaGGATCTGGTCATTGCTCTTTTTCAGAAAGTCTGT +
Preference number: 3 (lower is better)
Translates to: TAQLPSNQLNDL*DLVIALFQKVC
Trigger: ACAGACTTTCTGAAAAAGAGCAATGACCAGATCGCACAGATCGTTGAGCTGGTTCGAGGGAAGCTGAGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp CAGTCTCATGTACTCCACCCCCTGCTGTTTGAATGTTaGCTTCAGCAAGATGGGTTCAATAAAGGCATCCAG +
Preference number: 3 (lower is better)
Translates to: QSHVLHPLLFEC*LQQDGFNKGIQ
Trigger: CTGGATGCCTTTATTGAACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACATGAGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp GTCAGCATTCTCATGGAGACCAAATACTTCAGGGTGTaGTGTGATGGGGAGGGTCCTGAGATACTCAATGTA +
Preference number: 3 (lower is better)
Translates to: VSILMETKYFRV*CDGEGPEILNV
Trigger: TACATTGAGTATCTCAGGACCCTCCCCATCACAGCACACCCTGAAGTATTTGGTCTCCATGAGAATGCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp AGCTTCCCTCGAACCAGCTCAACGATCTGTGCGATCTaGTCATTGCTCTTTTTCAGAAAGTCTGTAAGGGTG +
Preference number: 3 (lower is better)
Translates to: SFPRTSSTICAI*SLLFFRKSVRV
Trigger: CACCCTTACAGACTTTCTGAAAAAGAGCAATGACCAGATCGCACAGATCGTTGAGCTGGTTCGAGGGAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp GATGTTGTTTTTGGTGAGTTTCACACTCTTGGGCCTTaGGTTACGATCATCCATGCCCATGATCAGGTTGCG +
Preference number: 3 (lower is better)
Translates to: DVVFGEFHTLGP*VTIIHAHDQVA
Trigger: CGCAACCTGATCATGGGCATGGATGATCGTAACCCAAGGCCCAAGAGTGTGAAACTCACCAAAAACAACATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp AACCTAGGGCTCCATAGTTCCTCCTCTCCTGGACAATaGCATGGAAGAAGCAAAGCCCAAACAACAGTTTCT +
Preference number: 3 (lower is better)
Translates to: NLGLHSSSSPGQ*HGRSKAQTTVS
Trigger: AGAAACTGTTGTTTGGGCTTTGCTTCTTCCATGCCATTGTCCAGGAGAGGAGGAACTATGGAGCCCTAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp AGACCCTCTGAAAAACATCTGCCAGAGGTCAGGTCTCAGGATTCACTGGAGAGACTCCTAATTGGTGATTaGGAAAACTCACTCGCCCTT +
Preference number: 3 (lower is better)
Translates to: RPSEKHLPEVRSQDSLERLLIGD*ENSLAL
Trigger: AAGGGCGAGTGAGTTTTCCAAATCACCAATTAGGAG...TCTCTCCAGTGAATCCTGAGACCTGACCTCTGGCAGATGTTTTTCAGAGGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR CAA 90 bp ATCCAGCTCTTCTCCAACGTTTTCCAACAAGACAGGGGTGCCAAACTGCAGGGCAACAAACCTGAGGTTTaGAAATTCTGCAAACCACAG +
Preference number: 3 (lower is better)
Translates to: IQLFSNVFQQDRGAKLQGNKPEV*KFCKPQ
Trigger: CTGTGGTTTGCAGAATTTCAAAACCTCAGGTTTGTT...GCCCTGCAGTTTGGCACCCCTGTCTTGTTGGAAAACGTTGGAGAAGAGCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTACTTGCATCTCTGAGTaGCCTCCTGAGCTTGAACAC +
Preference number: 3 (lower is better)
Translates to: SELVFSGTITSSQIFSNATCISE*PPELEH
Trigger: GTGTTCAAGCTCAGGAGGCAACTCAGAGATGCAAGT...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGAAGCCGTCAGAACAATaGAAGACCACACACTGCTTG +
Preference number: 3 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKKPSEQ*KTTHCL
Trigger: CAAGCAGTGTGTGGTCTTCAATTGTTCTGACGGCTT...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACACTTCGTAGTCTGGCTTaGGAAGAACAACTCCAGGAA +
Preference number: 3 (lower is better)
Translates to: QRLELDTMMPLSTEKESTLRSLA*EEQLQE
Trigger: TTCCTGGAGTTGTTCTTCCAAAGCCAGACTACGAAG...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTTTGGGGTTGATGATCTaGAACTCCACAGCAAACTCT +
Preference number: 3 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLLGLMI*NSTANS
Trigger: AGAGTTTGCTGTGGAGTTCAAGATCATCAACCCCAA...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGAAAGCAGCCATACAGTaGCCCCATTGTGATAGCCTT +
Preference number: 3 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKKAAIQ*PHCDSL
Trigger: AAGGCTATCACAATGGGGCAACTGTATGGCTGCTTT...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CAGCTTCAGCTCCGCCCGTTTCTGGTTCAGTTTTTGCATTTGGATCTCCAGCTTGTGGATGGGAGATGTTaGCACCACAAATTTGCAATG +
Preference number: 3 (lower is better)
Translates to: QLQLRPFLVQFLHLDLQLVDGRC*HHKFAM
Trigger: CATTGCAAATTTGTGGTGCAAACATCTCCCATCCAC...AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAACGGGCGGAGCTGAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTGTGAGTTTCACACTCTaGGGCCTTGGGTTACGATCA +
Preference number: 3 (lower is better)
Translates to: SELVFSGTITSSQIFSNAVSFTL*GLGLRS
Trigger: TGATCGTAACCCAAGGCCCAAGAGTGTGAAACTCAC...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TCTGTCATCATTGTCAATCAGGCGGTCATAAAAGACTCGGTAAACCTCATGGATTTGGTGATAGCTGATTaGCCAGTGCCTGTGGGACCC +
Preference number: 3 (lower is better)
Translates to: SVIIVNQAVIKDSVNLMDLVIAD*PVPVGP
Trigger: GGGTCCCACAGGCACTGGCAAATCAGCTATCACCAA...ATCCATGAGGTTTACCGAGTCTTTTATGACCGCCTGATTGACAATGATGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACCATCACATCCATCTGTaGTTCTGGACTCATGGGTCT +
Preference number: 3 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDHHIHL*FWTHGS
Trigger: AGACCCATGAGTCCAGAACAACAGATGGATGTGATG...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACGTTGATCATCAGGGTTaGAAGAAGAGGGAAGGAGCT +
Preference number: 3 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDVDHQG*KKREGA
Trigger: AGCTCCTTCCCTCTTCTTCAAACCCTGATGATCAAC...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGTTCTCAATCTTCAACTaGACATTCTCTGCTAAGCGC +
Preference number: 3 (lower is better)
Translates to: WRELARSSPLQLCKLSGLFSIFN*TFSAKR
Trigger: GCGCTTAGCAGAGAATGTCAAGTTGAAGATTGAGAA...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TCCCTCGAACCAGCTCAACGATCTGTGCGATCTGGTCATTGCTCTTTTTCAGAATCTGTAAACTCCAGTTaGGCAATTCCTTCGAAGCAC +
Preference number: 3 (lower is better)
Translates to: SLEPAQRSVRSGHCSFSESVNSS*AIPSKH
Trigger: GTGCTTCGAAGGAATTGCCAAACTGGAGTTTACAGA...TTCTGAAAAAGAGCAATGACCAGATCGCACAGATCGTTGAGCTGGTTCGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TCCCTCGAACCAGCTCAACGATCTGTGCGATCTGGTCATTGCTCTTTTTCAGAAGAGCTGATCATGCCCTaGATTTCCAGATTGTCTGTA +
Preference number: 3 (lower is better)
Translates to: SLEPAQRSVRSGHCSFSEELIMP*ISRLSV
Trigger: TACAGACAATCTGGAAATCAAGGGCATGATCAGCTC...TTCTGAAAAAGAGCAATGACCAGATCGCACAGATCGTTGAGCTGGTTCGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGTGTGCGATCTGGTCATaGCTCTTTTTCAGAAAGTCT +
Preference number: 3 (lower is better)
Translates to: WRELARSSPLQLCKLSGLCAIWS*LFFRKS
Trigger: AGACTTTCTGAAAAAGAGCAATGACCAGATCGCACA...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACGCTTTAGCCAGATCTTaGGTGGTTTCTGTCTTGCCT +
Preference number: 3 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDALARS*VVSVLP
Trigger: AGGCAAGACAGAAACCACCAAAGATCTGGCTAAAGC...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGGTAGCTACCTTTTTATaGTCATCCAGGACAGTGTTC +
Preference number: 3 (lower is better)
Translates to: WRELARSSPLQLCKLSGLVATFL*SSRTVF
Trigger: GAACACTGTCCTGGATGACAATAAAAAGGTAGCTAC...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGTGGAGAAGGAAGTCATaGGTGATAGCTGATTTGCCA +
Preference number: 3 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKWRRKS*VIADLP
Trigger: TGGCAAATCAGCTATCACCAATGACTTCCTTCTCCA...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CCACTTGTGAAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAAGTAGCGGTTCCTGCTCAATGGCAAACTaGAACATGACCAAAGACATG +
Preference number: 3 (lower is better)
Translates to: PLVKMQIPVSASLPSSGSCSMAN*NMTKDM
Trigger: CATGTCTTTGGTCATGTTCAAGTTTGCCATTGAGCA...GGAACCGCTACTTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACTCCTCCAGGAATTTGTaGGCCACCAACTCTAAGGCA +
Preference number: 3 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHSSRNL*ATNSKA
Trigger: TGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGA...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACTGTATCCTCAGAGGTTaGGATGAGCTGAGGCTGAAG +
Preference number: 3 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHCILRG*DELRLK
Trigger: CTTCAGCCTCAGCTCATCCAAACCTCTGAGGATACA...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp AACTGGCTTTGTACAGCTCTGGAAGAACAAAGGGTCTaGGATTGGGTCATTGAGGTAGGAACGCAGAAGGTT +
Preference number: 3 (lower is better)
Translates to: NWLCTALEEQRV*DWVIEVGTQKV
Trigger: AACCTTCTGCGTTCCTACCTCAATGACCCAATCTCAGACCCTTTGTTCTTCCAGAGCTGTACAAAGCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp CCAGAGCTGCAGCCAGAACTTTATAAGCTGATGTCTTaGCACCCATTGGATCTCCAACAATCATGTAGCCAT +
Preference number: 3 (lower is better)
Translates to: PELQPELYKLMS*HPLDLQQSCSH
Trigger: ATGGCTACATGATTGTTGGAGATCCAATGGGTGGCAAGACATCAGCTTATAAAGTTCTGGCTGCAGCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp GAGAAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTaGTGGCTTGACAGACCTTCATATATCTCCATTTCC +
Preference number: 3 (lower is better)
Translates to: EKRNRPCSQRKI*WLDRPSYISIS
Trigger: GGAAATGGAGATATATGAAGGTCTGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp GATGAGATTATGCTGAGTCCCAGTTTTGACTCAGAGTaGGATAGAGAAGAGATGGCCCAAGAGCCTTCTTCA +
Preference number: 3 (lower is better)
Translates to: DEIMLSPSFDSE*DREEMAQEPSS
Trigger: TGAAGAAGGCTCTTGGGCCATCTCTTCTCTATCCCACTCTGAGTCAAAACTGGGACTCAGCATAATCTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR CCA 72 bp AAAAGAAACAGGCCTTGCAGCCAGAGGAAGATCTGCTaGCTTGACAGACCTTCATATATCTCCATTTCCTCC +
Preference number: 3 (lower is better)
Translates to: KRNRPCSQRKIC*LDRPSYISISS
Trigger: GGAGGAAATGGAGATATATGAAGGTCTGTCAAGCCAGCAGATCTTCCTCTGGCTGCAAGGCCTGTTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp CTTTCCCATGGTTTCACAGATGAAGTTTTGAATGGCTaGGACTATCTTGTCGGGCCGCAAACATCGAAGGAT +
Preference number: 3 (lower is better)
Translates to: LSHGFTDEVLNG*DYLVGPQTSKD
Trigger: ATCCTTCGATGTTTGCGGCCCGACAAGATAGTCCCAGCCATTCAAAACTTCATCTGTGAAACCATGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp ACTGGAATCACCGTAGGATCCCTGGAGATCAAAGGTTaGGGCTTCGATGAATATCTTTCCCATGGTTTCACA +
Preference number: 3 (lower is better)
Translates to: TGITVGSLEIKG*GFDEYLSHGFT
Trigger: TGTGAAACCATGGGAAAGATATTCATCGAAGCCCCAACCTTTGATCTCCAGGGATCCTACGGTGATTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CATTACCTCCTCCAGGTTAAAGTCGTTGGGAAGCTTGGAGAGTATATCCTGGGCCCGGTTTACATCCACTaGATACAGAATCAAATTGTC +
Preference number: 3 (lower is better)
Translates to: HYLLQVKVVGKLGEYILGPVYIH*IQNQIV
Trigger: GACAATTTGATTCTGTATCAAGTGGATGTAAACCGG...GCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACTTGCAAATGCTGGTATaGGTTTCCCGGTTTACATCC +
Preference number: 3 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDLQMLV*VSRFTS
Trigger: GGATGTAAACCGGGAAACCAATACCAGCATTTGCAA...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACAATGTCACTGATCTGTaGCCAGTGCCGATCCTTCAT +
Preference number: 3 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHNVTDL*PVPILH
Trigger: ATGAAGGATCGGCACTGGCAACAGATCAGTGACATT...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAGTTATGGAAGACGCTaGTTCCCGGAAAGCATTGGC +
Preference number: 3 (lower is better)
Translates to: MLFLASQRSPQTELSKRTSYGRR*FPESIG
Trigger: GCCAATGCTTTCCGGGAACAAGCGTCTTCCATAACT...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TGGAGGGAGTTGGCAAGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTTGCTTTCTGGGAAGATGTaGTTTTTGGTGAGTTTCACA +
Preference number: 3 (lower is better)
Translates to: WRELARSSPLQLCKLSGLLSGKM*FLVSFT
Trigger: TGTGAAACTCACCAAAAACAACATCTTCCCAGAAAG...CAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCTTGCCAACTCCCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTCAATGTCCAGCCTGTTaGTGTCTTTCTTGTCAAACC +
Preference number: 3 (lower is better)
Translates to: SELVFSGTITSSQIFSNAQCPAC*CLSCQT
Trigger: GGTTTGACAAGAAAGACACAAACAGGCTGGACATTG...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACGTTTCCTTCACCAGGTaGAAGAAAGTCTGTCTGTCA +
Preference number: 3 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDVSFTR*KKVCLS
Trigger: TGACAGACAGACTTTCTTCAACCTGGTGAAGGAAAC...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TCTGAGTTGGTGTTCTCAGGGACAATCACCTCCTCACAAATCTTCTCTAACGCTAGGGAGAAAAGTAGCTaGTCCTTCTCAAACAGTGAG +
Preference number: 3 (lower is better)
Translates to: SELVFSGTITSSQIFSNAREKSS*SFSNSE
Trigger: CTCACTGTTTGAGAAGGACAAGCTACTTTTCTCCCT...AGCGTTAGAGAAGATTTGTGAGGAGGTGATTGTCCCTGAGAACACCAACTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp GCTAATAAGGCTATCTTCTGCTATCTGAATGTGTGGTaGTCCCTTCTCAGAACATGGCCAGAAGCACCTACA +
Preference number: 3 (lower is better)
Translates to: ANKAIFCYLNVW*SLLRTWPEAPT
Trigger: TGTAGGTGCTTCTGGCCATGTTCTGAGAAGGGATCACCACACATTCAGATAGCAGAAGATAGCCTTATTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR TCA 72 bp GCTATAGTAATAGTCACTTTCCTTCTCAGACCTAAGTaGGACTTGAAGGGGTTCAAGGGCTGGAGTTGTCAG +
Preference number: 3 (lower is better)
Translates to: AIVIVTFLLRPK*DLKGFKGWSCQ
Trigger: CTGACAACTCCAGCCCTTGAACCCCTTCAAGTCTCACTTAGGTCTGAGAAGGAAAGTGACTATTACTATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp GGGATCTCACTGACTTTGTCAGCAATGGTGCTGTACTaGTTGCAAATGCTGGTATTGGTTTCCCGGTTTACA +
Preference number: 3 (lower is better)
Translates to: GISLTLSAMVLY*LQMLVLVSRFT
Trigger: TGTAAACCGGGAAACCAATACCAGCATTTGCAATCAGTACAGCACCATTGCTGACAAAGTCAGTGAGATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp AATTCTGAGCACCTTTTAATGAGGTCCATCTCTGCCTaGTCCCTCTTGCTCATGAGCAGATTTCGGCTACTT +
Preference number: 3 (lower is better)
Translates to: NSEHLLMRSISA*SLLLMSRFRLL
Trigger: AAGTAGCCGAAATCTGCTCATGAGCAAGAGGGATCAGGCAGAGATGGACCTCATTAAAAGGTGCTCAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp TTGCTTGGACCAGCATCTTCCCATACCGTAAGAACATaGCATCAAACCCTTTCCCAAAATGCCAGTCAGCAA +
Preference number: 3 (lower is better)
Translates to: LLGPASSHTVRT*HQTLSQNASQQ
Trigger: TTGCTGACTGGCATTTTGGGAAAGGGTTTGATGTCATGTTCTTACGGTATGGGAAGATGCTGGTCCAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp TCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTTaGTGGCTGTCTCATCTTCGAGGATGTTGCCCTCAC +
Preference number: 3 (lower is better)
Translates to: SPQTELSKRTKF*WLSHLRGCCPH
Trigger: GTGAGGGCAACATCCTCGAAGATGAGACAGCCATCAAAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp ATACACTGGACACACATAAATGTCCTGATGCAGGAATaGTGCACTCTCTCCGGGTTTCAGCCAAATAATGGG +
Preference number: 3 (lower is better)
Translates to: IHWTHINVLMQE*CTLSGFQPNNG
Trigger: CCCATTATTTGGCTGAAACCCGGAGAGAGTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp CATGCGGGTCTCATCAATTTGGGTTTCTGTCACAGATaGTATTTCTTGCTTCTCAGAGATCTCCTCAGACAG +
Preference number: 3 (lower is better)
Translates to: HAGLINLGFCHR*YFLLLRDLLRQ
Trigger: CTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCATCTGTGACAGAAACCCAAATTGATGAGACCCGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp AAAAACATCTGCCAGAGGTCAGGTCTCAGGATTCACTaGAGAGATGCCAATTGGAAGCCCTGTACTTTTCAA +
Preference number: 3 (lower is better)
Translates to: KNICQRSGLRIH*RDANWKPCTFQ
Trigger: TTGAAAAGTACAGGGCTTCCAATTGGCATCTCTCCAGTGAATCCTGAGACCTGACCTCTGGCAGATGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR CCA 72 bp AGTTTCCCAGGTACTCGTAGCCATACAAGGCTTCTGTaGTTATCATTTGCACATGAACGTTCTTTTCCGTCC +
Preference number: 3 (lower is better)
Translates to: SFPGTRSHTRLL*LSFAHERSFPS
Trigger: GGACGGAAAAGAACGTTCATGTGCAAATGATAACCACAGAAGCCTTGTATGGCTACGAGTACCTGGGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ACTGGAGAGATGCCAATTGGAAGCCCTGTACTTTTCAAGAAAATGACTCATGACTGCTCAAACTCAGGCTaGAAAACGGCTGAAGGGATT +
Preference number: 3 (lower is better)
Translates to: TGEMPIGSPVLFKKMTHDCSNSG*KTAEGI
Trigger: AATCCCTTCAGCCGTTTTCAAGCCTGAGTTTGAGCA...GTCATGAGTCATTTTCTTGAAAAGTACAGGGCTTCCAATTGGCATCTCTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR-3UTR CAA 90 bp TCAATGCTTCCAGGAAAACTTCGTAGTCTGGCTTTGGAAGAACAACTCCAGGAAGGGTATGTATATACCTaGGGGATCCCATCAGAATTC +
Preference number: 3 (lower is better)
Translates to: SMLPGKLRSLALEEQLQEGYVYT*GIPSEF
Trigger: GAATTCTGATGGGATCCCCAAGGTATATACATACCC...TTCCTGGAGTTGTTCTTCCAAAGCCAGACTACGAAGTTTTCCTGGAAGCATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACTCTTTGGCTGGCATGTaGAGATCATCTACAAACACA +
Preference number: 3 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDSLAGM*RSSTNT
Trigger: TGTGTTTGTAGATGATCTCAACATGCCAGCCAAAGA...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACACTCGTCATAGATTTTTaGGTCACTTTCTGGCTTCAA +
Preference number: 3 (lower is better)
Translates to: QRLELDTMMPLSTEKESTLVIDF*VTFWLQ
Trigger: TTGAAGCCAGAAAGTGACCAAAAAATCTATGACGAG...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTACTCTAAGGCATCGGTaGGCCAGGACTGGAACCAAT +
Preference number: 3 (lower is better)
Translates to: FLASQRSPQTELSKRTKFTLRHR*ARTGTN
Trigger: ATTGGTTCCAGTCCTGGCCAACCGATGCCTTAGAGT...AAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CCACTTGTGAAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAAGTAGCGGTTCCCTATTCAGGAGAGTTTaGAAGGTTAGGATCAATTCA +
Preference number: 3 (lower is better)
Translates to: PLVKMQIPVSASLPSSGSLFRRV*KVRINS
Trigger: TGAATTGATCCTAACCTTCAAAACTCTCCTGAATAG...GGAACCGCTACTTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACGACACAATGATGCCATaGTCAACAGAGAAGGAGTCA +
Preference number: 3 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHDTMMP*STEKES
Trigger: TGACTCCTTCTCTGTTGACAATGGCATCATTGTGTC...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACGAAGAGGACAAAATTTaGATGGCTGTCTCATCTTCG +
Preference number: 3 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDEEDKI*MAVSSS
Trigger: CGAAGATGAGACAGCCATCAAAATTTTGTCCTCTTC...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp ACACGGCATCAAGACAGAACATGGCCAAAGGCACGGTaGTGTGCATGGATGCAATTTCATTTTTCCTCTTTT +
Preference number: 3 (lower is better)
Translates to: TRHQDRTWPKAR*CAWMQFHFSSF
Trigger: AAAAGAGGAAAAATGAAATTGCATCCATGCACATCACCGTGCCTTTGGCCATGTTCTGTCTTGATGCCGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp TGTGAAATCCACTGGAAGTCATTTAGACTGTTGATATaGTCATGCCTCAGTTTGGCCACCACATCACGAGCA +
Preference number: 3 (lower is better)
Translates to: CEIHWKSFRLLI*SCLSLATTSRA
Trigger: TGCTCGTGATGTGGTGGCCAAACTGAGGCATGATCATATCAACAGTCTAAATGACTTCCAGTGGATTTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp CATAATTCTGAGAAACTCCCGTCAAAAAGGACTGTGTaGAGTAGAATCCAGAGATCCAAAAGACCACAGGGG +
Preference number: 3 (lower is better)
Translates to: HNSEKLPSKRTV*SRIQRSKRPQG
Trigger: CCCCTGTGGTCTTTTGGATCTCTGGATTCTACTTCACACAGTCCTTTTTGACGGGAGTTTCTCAGAATTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp AAGGGATTCCCTAATTCCTTAAGGCACATGGACAAATaGCTTAGGCAGGTGTCCTGTGCTTTGTCATATAGT +
Preference number: 3 (lower is better)
Translates to: KGFPNSLRHMDK*LRQVSCALSYS
Trigger: ACTATATGACAAAGCACAGGACACCTGCCTAAGGCATTTGTCCATGTGCCTTAAGGAATTAGGGAATCCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR GCA 72 bp ATAATATTTTCACCCAGTCTCATGTACTCCACCCCCTaGTGTTTGAATGTTGCCTTCAGCAAGATGGGTTCA +
Preference number: 3 (lower is better)
Translates to: IIFSPSLMYSTP*CLNVAFSKMGS
Trigger: TGAACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACATGAGACTGGGTGAAAATATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp ATGGCATGGAAGAAGCAAAGCCCAAACAACAGTTTCTaGCATATAACTGGCTTTGTACAGCTCTGGAAGAAC +
Preference number: 3 (lower is better)
Translates to: MAWKKQSPNNSF*HITGFVQLWKN
Trigger: GTTCTTCCAGAGCTGTACAAAGCCAGTTATATGGCAGAAACTGTTGTTTGGGCTTTGCTTCTTCCATGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp TATCAACAAATTTGCCGAATCCATATTCCAGCATATTaGCGAGGCACGTGGTCTCTGTGGGCTTTATCTCAT +
Preference number: 3 (lower is better)
Translates to: YQQICRIHIPAY*RGTWSLWALSH
Trigger: ATGAGATAAAGCCCACAGAGACCACGTGCCTCGCCAATATGCTGGAATATGGATTCGGCAAATTTGTTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp GTAAGTATCCACAGTGGTAAATTTCTTGCCCTCTTCTaGCATCTGGGCTATGATATCTTCGGAGCTGAAGAT +
Preference number: 3 (lower is better)
Translates to: VSIHSGKFLALF*HLGYDIFGAED
Trigger: ATCTTCAGCTCCGAAGATATCATAGCCCAGATGCCAGAAGAGGGCAAGAAATTTACCACTGTGGATACTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp AACAGTTTCTGCCATATAACTGGCTTTGTACAGCTCTaGAAGAACAAAGGGTCTGAGATTGGGTCATTGAGG +
Preference number: 3 (lower is better)
Translates to: NSFCHITGFVQL*KNKGSEIGSLR
Trigger: CCTCAATGACCCAATCTCAGACCCTTTGTTCTTCCAGAGCTGTACAAAGCCAGTTATATGGCAGAAACTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CACTCGTCTTATACACTGGACACACATAAATGTCCTGATGCAGGAATGATGCACGCAAACCACAGTTCTTaGAGTTTGTACATCATGGGA +
Preference number: 3 (lower is better)
Translates to: HSSYTLDTHKCPDAGMMHANHSS*SLYIMG
Trigger: TCCCATGATGTACAAACTCAAAGAACTGTGGTTTGC...GTGCATCATTCCTGCATCAGGACATTTATGTGTGTCCAGTGTATAAGACGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACATGGGAATATGCTGCTaGAACTTCTCAATCTTCAAC +
Preference number: 3 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDMGICC*NFSIFN
Trigger: GTTGAAGATTGAGAAGTTCAAGCAGCATATTCCCAT...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp CATGACTTCTCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATTGTCCAAGTTCTGTGGTTATCATTaGCACATGAACGTTCTTTTC +
Preference number: 3 (lower is better)
Translates to: HDFSDNHSGAGLGKGLSKFCGYH*HMNVLF
Trigger: GAAAAGAACGTTCATGTGCAAATGATAACCACAGAA...CTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGAGAAGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACTTTCTGGTTCAGTTTTaGCATTTGGATCTCCAGCTT +
Preference number: 3 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDFLVQF*HLDLQL
Trigger: AAGCTGGAGATCCAAATGCAAAAACTGAACCAGAAA...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp TCACGTAAAATGCTAATAAGGCTATCTTCTGCTATCTaGATGTGTGGTGATCCCTTCTCAGAACATGGCCAG +
Preference number: 3 (lower is better)
Translates to: SRKMLIRLSSAI*MCGDPFSEHGQ
Trigger: CTGGCCATGTTCTGAGAAGGGATCACCACACATTCAGATAGCAGAAGATAGCCTTATTAGCATTTTACGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR TCA 72 bp TTTCACAATCCAGGACATGGTGTTCATTGTGAATTCTaGGAACAGGGAGGGATCAGACCCTCTGAAAAACAT +
Preference number: 3 (lower is better)
Translates to: FHNPGHGVHCEF*EQGGIRPSEKH
Trigger: ATGTTTTTCAGAGGGTCTGATCCCTCCCTGTTCTCAGAATTCACAATGAACACCATGTCCTGGATTGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR TCA 72 bp TCACCTCCTCGTTCTCCGGGGCAATCATGTCTTTTCTaGTACCATTGGTCAAATAGTAGTAATATCTCTCCA +
Preference number: 3 (lower is better)
Translates to: SPPRSPGQSCLF*YHWSNSSNISP
Trigger: TGGAGAGATATTACTACTATTTGACCAATGGTATCAGAAAAGACATGATTGCCCCGGAGAACGAGGAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp CATTACCCTTGTATCGTTTACCGCCTGGGCCATGAGTaGTTTCCAGTAAGTATCCACAGTGGTAAATTTCTT +
Preference number: 3 (lower is better)
Translates to: HYPCIVYRLGHE*FPVSIHSGKFL
Trigger: AAGAAATTTACCACTGTGGATACTTACTGGAAATCACTCATGGCCCAGGCGGTAAACGATACAAGGGTAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp ATTCTGTCCATGCATTCCAGTGTCCACCCCCTTGTTTaGGGAAGTAAAAATCATAGATGCTTCCTCTTTCTG +
Preference number: 3 (lower is better)
Translates to: ILSMHSSVHPLV*GSKNHRCFLFL
Trigger: CAGAAAGAGGAAGCATCTATGATTTTTACTTCCTCAAACAAGGGGGTGGACACTGGAATGCATGGACAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp TACTTTCAAAGACATCTTCTATTCACTGGGCAAGTCTaGATAATCCATCAGGAACTCAAGCCGTTCACTTGC +
Preference number: 3 (lower is better)
Translates to: YFQRHLLFTGQV*IIHQELKPFTC
Trigger: GCAAGTGAACGGCTTGAGTTCCTGATGGATTATGCAGACTTGCCCAGTGAATAGAAGATGTCTTTGAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp ATCTGGATAATCTTCCCAATGAACCAGGGCACTGGCTaGAGCTTCATTTTTCTGATGTTGTTGTTCAATGCT +
Preference number: 3 (lower is better)
Translates to: IWIIFPMNQGTG*SFIFLMLLFNA
Trigger: AGCATTGAACAACAACATCAGAAAAATGAAGCTGCAGCCAGTGCCCTGGTTCATTGGGAAGATTATCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp CAGCAATGGTGCTGTACTGATTGCAAATGCTGGTATTaGTTTCCCGGTTTACATCCACTTGATACAGAATCA +
Preference number: 3 (lower is better)
Translates to: QQWCCTDCKCWY*FPGLHPLDTES
Trigger: TGATTCTGTATCAAGTGGATGTAAACCGGGAAACCAATACCAGCATTTGCAATCAGTACAGCACCATTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp AGATTTCGGCTACTTTCAAAGACATCTTCTATTCACTaGGCAAGTCTGCATAATCCATCAGGAACTCAAGCC +
Preference number: 3 (lower is better)
Translates to: RFRLLSKTSSIH*ASLHNPSGTQA
Trigger: GGCTTGAGTTCCTGATGGATTATGCAGACTTGCCCAGTGAATAGAAGATGTCTTTGAAAGTAGCCGAAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp TCAACTCAAATTCTGTCAGCGCCAGATCTAGGTTCTTaGAGAGGTCATGAAGCTTTTCCACATTGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: STQILSAPDLGS*RGHEAFPHCSS
Trigger: TGAAGAACAATGTGGAAAAGCTTCATGACCTCTCCAAGAACCTAGATCTGGCGCTGACAGAATTTGAGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp GAGCTGAAGATCGGTTCCAGGTACAACCAAGTTACTTaGCATTTTAACCAGGCATCCAAATTTTCTTGTACC +
Preference number: 3 (lower is better)
Translates to: ELKIGSRYNQVT*HFNQASKFSCT
Trigger: GGTACAAGAAAATTTGGATGCCTGGTTAAAATGCCAAGTAACTTGGTTGTACCTGGAACCGATCTTCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTAACTCTTCCATCTGGTaGGCTGCATGTAAATCACCC +
Preference number: 3 (lower is better)
Translates to: FLASQRSPQTELSKRTKFNSSIW*AACKSP
Trigger: GGGTGATTTACATGCAGCCAACCAGATGGAAGAGTT...AAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAGGGAAGATGTTGTTTTaGGTGAGTTTCACACTCTTG +
Preference number: 3 (lower is better)
Translates to: MLFLASQRSPQTELSKRTGKMLF*VSFTLL
Trigger: CAAGAGTGTGAAACTCACCAAAAACAACATCTTCCC...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTTTCTCCATGGTCTGCTaGAAGCAATTGGAGGTGGTT +
Preference number: 3 (lower is better)
Translates to: FLASQRSPQTELSKRTKFFSMVC*KQLEVV
Trigger: AACCACCTCCAATTGCTTCAAGCAGACCATGGAGAA...AAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp TTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTGTTCAGTTTTTGCATTaGGATCTCCAGCTTCCCCTC +
Preference number: 3 (lower is better)
Translates to: FLASQRSPQTELSKRTKFVQFLH*DLQLPL
Trigger: GAGGGGAAGCTGGAGATCCAAATGCAAAAACTGAAC...AAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp GATACATTTTTAATGACAGCTGGCTGGAAATCAGGGTaGTCAATAAACCTTTCCCGGATTCGCTTCATGATC +
Preference number: 3 (lower is better)
Translates to: DTFLMTAGWKSG*SINLSRIRFMI
Trigger: GATCATGAAGCGAATCCGGGAAAGGTTTATTGATCACCCTGATTTCCAGCCAGCTGTCATTAAAAATGTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR TCA 72 bp AATTTTTCTTTCTGTTCATCAGTTCAAACTCGTCATTaGGATCTTGGAGTCGGTCTTCCACCAGCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: NFSFCSSVQTRH*DLGVGLPPASA
Trigger: AGCTGAAGCTGGTGGAAGACCGACTCCAAGATCTCAATGACGAGTTTGAACTGATGAACAGAAAGAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp CACAGCCTTACTAAGTATATCCATTGGCCAAGTATGTaGCATAAACCTCCAGGTTGTGACATTTTCCTAGTT +
Preference number: 3 (lower is better)
Translates to: HSLTKYIHWPSM*HKPPGCDIFLV
Trigger: AACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTTAGTAAGGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR CCA 72 bp ATAGATCTGGATAATCTTCCCAATGAACCAGGGCACTaGCTGCAGCTTCATTTTTCTGATGTTGTTGTTCAA +
Preference number: 3 (lower is better)
Translates to: IDLDNLPNEPGH*LQLHFSDVVVQ
Trigger: TTGAACAACAACATCAGAAAAATGAAGCTGCAGCCAGTGCCCTGGTTCATTGGGAAGATTATCCAGATCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CCA 72 bp GAGACAGACTTTCACGGCAACTTCAGGGAGATAATGTaGATTCCTCAGACGAGTGGTTATATAGAACTTAAA +
Preference number: 3 (lower is better)
Translates to: ETDFHGNFREIM*IPQTSGYIELK
Trigger: TTTAAGTTCTATATAACCACTCGTCTGAGGAATCCACATTATCTCCCTGAAGTTGCCGTGAAAGTCTGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR-3UTR CAA 90 bp ATGCTATTTCTTGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGAAGAGGACACACAGTTCTTTGAGTTaGTACATCATGGGATTCACT +
Preference number: 3 (lower is better)
Translates to: MLFLASQRSPQTELSKRTHSSLS*YIMGFT
Trigger: AGTGAATCCCATGATGTACAAACTCAAAGAACTGTG...TGTCCTCTTCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR GCA 72 bp AGCACCTACAAATGTGGCCCTCTAGGTTCAATATTCTaGCATCCTAAAAATATTTGTTCCATACCTACACAC +
Preference number: 3 (lower is better)
Translates to: STYKCGPLGSIF*HPKNICSIPTH
Trigger: GTGTGTAGGTATGGAACAAATATTTTTAGGATGGCAGAATATTGAACCTAGAGGGCCACATTTGTAGGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR TCA 72 bp CAAATGCTGGTATTGGTTTCCCGGTTTACATCCACTTaGTACAGAATCAAATTGTCTTTAAGATTTTGGGCT +
Preference number: 3 (lower is better)
Translates to: QMLVLVSRFTST*YRIKLSLRFWA
Trigger: AGCCCAAAATCTTAAAGACAATTTGATTCTGTATCAAGTGGATGTAAACCGGGAAACCAATACCAGCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp CCCTCCGGACTGTCTCGGCAGGGTCAGCAGCACTCCTaGGAAGAGCTGGTTGGTTTCCTGGTTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PSGLSRQGQQHS*EELVGFLVVLG
Trigger: ACCAAGGACAACCAGGAAACCAACCAGCTCTTCCAAGGAGTGCTGCTGACCCTGCCGAGACAGTCCGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR GCA 90 bp TCCCATTTCCGGCACTCTGCTTCTATTGGCTTGATGAACACGGAACCACACATACGGCAGCTCTGGCCGTaGCTGGGAGTGGCTCATGTG +
Preference number: 4 (lower is better)
Translates to: SHFRHSASIGLMNTEPHIRQLWP*LGVAHV
Trigger: CACATGAGCCACTCCCAGGCACGGCCAGAGCTGCCG...TATGTGTGGTTCCGTGTTCATCAAGCCAATAGAAGCAGAGTGCCGGAAATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR CCA 90 bp AGACCCTCTGAAAAACATCTGCCAGAGGTCAGGTCTCAGGATTCACTGGAGAGAACGTGGACAGTTTGGTaGCGCTCTGCCGCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RPSEKHLPEVRSQDSLERTWTVW*RSAAHC
Trigger: GCAGTGGGCGGCAGAGCGCCACCAAACTGTCCACGT...TCTCTCCAGTGAATCCTGAGACCTGACCTCTGGCAGATGTTTTTCAGAGGGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR CAA 72 bp CTCGGCAGGGTCAGCAGCACTCCTTGGAAGAGCTGGTaGGTTTCCTGGTTGTCCTTGGTGATGTCAGCATTC +
Preference number: 4 (lower is better)
Translates to: LGRVSSTPWKSW*VSWLSLVMSAF
Trigger: GAATGCTGACATCACCAAGGACAACCAGGAAACCAACCAGCTCTTCCAAGGAGTGCTGCTGACCCTGCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR CCA 90 bp TCAATGCTTCCAGGAAAACTTCGTAGTCTGGCTTTGGAAGAACAACTCCAGGAACAGAGGCGGCAGCTCTaGCCGTGCCTGGGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SMLPGKLRSLALEEQLQEQRRQL*PCLGVA
Trigger: AGCCACTCCCAGGCACGGCCAGAGCTGCCGCCTCTG...TTCCTGGAGTTGTTCTTCCAAAGCCAGACTACGAAGTTTTCCTGGAAGCATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp CTGATCTGTTGCCAGTGCCGATCCTTCATCCCGGGGTaGCAGGCGATATTCAGGATGGGAATATGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LICCQCRSFIPG*QAIFRMGICCL
Trigger: CAAGCAGCATATTCCCATCCTGAATATCGCCTGCAACCCCGGGATGAAGGATCGGCACTGGCAACAGATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp GGGCTTTATCTCATAGCCAACAATGTCACTGATCTGTaGCCAGTGCCGATCCTTCATCCCGGGGTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: GLYLIANNVTDL*PVPILHPGVAG
Trigger: GCCTGCAACCCCGGGATGAAGGATCGGCACTGGCAACAGATCAGTGACATTGTTGGCTATGAGATAAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp CCACTTGTGAAGATGCAAATTCCAGTTTCTGCAAGCCTGCCAAGTAGCGGTTCCCTGGGTCCACGGTGGTaGTCCTGTTCTTTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PLVKMQIPVSASLPSSGSLGPRW*SCSLKG
Trigger: GCCCTTCAAAGAACAGGATCACCACCGTGGACCCAG...GGAACCGCTACTTGGCAGGCTTGCAGAAACTGGAATTTGCATCTTCACAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp ACACTCTCATTCTCCTCAGGGTACTTAAGCTTCAGATaGCCTGCAGCTGTGAGCACAGACTTGACAGCCCGC +
Preference number: 4 (lower is better)
Translates to: TLSFSSGYLSFR*PAAVSTDLTAR
Trigger: GCGGGCTGTCAAGTCTGTGCTCACAGCTGCAGGCAATCTGAAGCTTAAGTACCCTGAGGAGAATGAGAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp CCAGGAATTTGTTGGCCACCAACTCTAAGGCATCGGTaGGCCAGGACTGGAACCAATCAATGGTGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PGICWPPTLRHR*ARTGTNQWCSS
Trigger: ACTGCTGCACCATTGATTGGTTCCAGTCCTGGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp ATGTTGTCATCAAGCTCCACGTCCTCCAGGAATTTGTaGGCCACCAACTCTAAGGCATCGGTTGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: MLSSSSTSSRNL*ATNSKASVGQD
Trigger: GTCCTGGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGCTTGATGACAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp CGAATGTTGTCATCAAGCTCCACGTCCTCCAGGAATTaGTTGGCCACCAACTCTAAGGCATCGGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RMLSSSSTSSRN*LATNSKASVGQ
Trigger: CTGGCCAACCGATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGTGGAGCTTGATGACAACATTCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR GCA 90 bp TCCCTCGAACCAGCTCAACGATCTGTGCGATCTGGTCATTGCTCTTTTTCAGAACCAGGGTCCAGGATGTaGGTTGCATCAGTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: SLEPAQRSVRSGHCSFSEPGSRM*VASVGD
Trigger: ATCCCCCACTGATGCAACGCACATCCTGGACCCTGG...TTCTGAAAAAGAGCAATGACCAGATCGCACAGATCGTTGAGCTGGTTCGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR CCA 90 bp CAGCGCCTGGAATTGGACACAATGATGCCATTGTCAACAGAGAAGGAGTCAACACAGATGGCTCCTCATTaGCAGACACAGGCAGAGGCG +
Preference number: 4 (lower is better)
Translates to: QRLELDTMMPLSTEKESTQMAPH*QTQAEA
Trigger: CGCCTCTGCCTGTGTCTGCCAATGAGGAGCCATCTG...TGTTGACTCCTTCTCTGTTGACAATGGCATCATTGTGTCCAATTCCAGGCGCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR CCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTAGATTCCCAGGTACCTaGAAGAAGGTCAGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCRFPGT*KKVRRA
Trigger: GGCCCGCCTGACCTTCTTCCAGGTACCTGGGAATCT...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp TCAGGTCTCAGGATTCACTGGAGAGATGCCAATTGGAAGCCCTGTACTTTTCAACCTCAGAGGTTTGGATaGGCTGAGGCTGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGLRIHWRDANWKPCTFQPQRFG*AEAEGQ
Trigger: CTGCCCTTCAGCCTCAGCTCATCCAAACCTCTGAGG...TTGAAAAGTACAGGGCTTCCAATTGGCATCTCTCCAGTGAATCCTGAGACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR CAA 72 bp CTTTCTGTTCATCAGTTCAAACTCGTCATTGAGATCTaGGAGTCGGTCTTCCACCAGCTTCAGCTCCGCCCG +
Preference number: 4 (lower is better)
Translates to: LSVHQFKLVIEI*ESVFHQLQLRP
Trigger: CGGGCGGAGCTGAAGCTGGTGGAAGACCGACTCCAAGATCTCAATGACGAGTTTGAACTGATGAACAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp CTTCTCCTTGGCAGCCACAATGCCAAGGAGTTGATCTaGGAGACCCAAGGGTGTGATCATGAAGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LLLGSHNAKELI*ETQGCDHEVEE
Trigger: CTCCTCAACTTCATGATCACACCCTTGGGTCTCCAAGATCAACTCCTTGGCATTGTGGCTGCCAAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp GGGTACTTCTTCATTACCTCCTCCAGGTTAAAGTCGTaGGGAAGCTTGGAGAGTATATCCTGGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GYFFITSSRLKS*GSLESISWASS
Trigger: GGAGCTGGCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATGAAGAAGTACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTCCCCAGGGGCTTCAGTaGTGGGTAGGACTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPPQGLQ*WVGLGC
Trigger: GCAGCCAAGTCCTACCCATCACTGAAGCCCCTGGGG...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR CAA 72 bp CATCAGGAACTCAAGCCGTTCACTTGCATCTCTGAGTaGCCTCCTGAGCTTGAACACAGTGACATCACTGGA +
Preference number: 4 (lower is better)
Translates to: HQELKPFTCISE*PPELEHSDITG
Trigger: TCCAGTGATGTCACTGTGTTCAAGCTCAGGAGGCAACTCAGAGATGCAAGTGAACGGCTTGAGTTCCTGATG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp ACTCTGCAGATCCTGGAGATGTGCTCAATGGCAAACTaGAACATGACCAAAGACATGGGGGCCTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: TLQILEMCSMAN*NMTKDMGALLT
Trigger: TGTCAGCAAGGCCCCCATGTCTTTGGTCATGTTCAAGTTTGCCATTGAGCACATCTCCAGGATCTGCAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp AAGTACTTGCACATGGAGACGACCTCTGCCCGAATGTaGTCATCAAGCTCCACGTCCTCCAGGAATTTGTTG +
Preference number: 4 (lower is better)
Translates to: KYLHMETTSARM*SSSSTSSRNLL
Trigger: CAACAAATTCCTGGAGGACGTGGAGCTTGATGACAACATTCGGGCAGAGGTCGTCTCCATGTGCAAGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp CTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATaGGGCCCGATAATCCACCGTGAAGGCACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LVLTGNQPFILA*GPIIHREGTQV
Trigger: TACCTGGGTGCCTTCACGGTGGATTATCGGGCCCAATGCCAAAATGAATGGTTGGTTTCCTGTAAGGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TTCTGTAGGACCACCCAGGTCCCTTCATGGATGGCTTaGTTGATCATATTGGCAGCAATAGGACCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FCRTTQVPSWMA*LIILAAIGPWP
Trigger: AGGCCAAGGTCCTATTGCTGCCAATATGATCAACAAAGCCATCCATGAAGGGACCTGGGTGGTCCTACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TTCATTACCTCCTCCAGGTTAAAGTCGTTGGGAAGCTaGGAGAGTATATCCTGGGCCAGCTCCTCAACCACT +
Preference number: 4 (lower is better)
Translates to: FITSSRLKSLGS*ESISWASSSTT
Trigger: AGTGGTTGAGGAGCTGGCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp ACTTCCTCCAGCTCTGAGGACATTAGGACTTGTCCTTaGATGGCTCGGCCAAGATCAATAAGGCTTCTGCGA +
Preference number: 4 (lower is better)
Translates to: TSSSSEDIRTCP*MARPRSIRLLR
Trigger: TCGCAGAAGCCTTATTGATCTTGGCCGAGCCATCAAAGGACAAGTCCTAATGTCCTCAGAGCTGGAGGAAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp TTAAGGCACATGGACAAATGCCTTAGGCAGGTGTCCTGTGCTTTGTCATATAGTCATACCTTGATCGCCTaGGAGATGGCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRHMDKCLRQVSCALSYSHTLIA*EMAAAA
Trigger: TGCTGCTGCTGCCATCTCTCAGGCGATCAAGGTATG...ACTATATGACAAAGCACAGGACACCTGCCTAAGGCATTTGTCCATGTGCCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR GCA 90 bp AAACATCTGCCAGAGGTCAGGTCTCAGGATTCACTGGAGAGATGCCAATTGGAACATGGAGACGACCTCTaGCCGAATGTTGTCATCAAG +
Preference number: 4 (lower is better)
Translates to: KHLPEVRSQDSLERCQLEHGDDL*PNVVIK
Trigger: CTTGATGACAACATTCGGGCAGAGGTCGTCTCCATG...TTCCAATTGGCATCTCTCCAGTGAATCCTGAGACCTGACCTCTGGCAGATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR GCA 90 bp ATGCTGAGTCCCAGTTTTGACTCAGAGTGGGATAGAGAAGAGATGGCCCAAGAGTCCTTCTCATCTGCCTaGACCAGAAGTTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: MLSPSFDSEWDREEMAQESFSSA*TRSFLA
Trigger: TGCCAAGAAACTTCTGGTGCAGGCAGATGAGAAGGA...CTCTTGGGCCATCTCTTCTCTATCCCACTCTGAGTCAAAACTGGGACTCAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR GCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTCCAACAAGACAGGGGTaGCAAACTGCAGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCPTRQG*QTAGHF
Trigger: AAAATGCCCTGCAGTTTGGCACCCCTGTCTTGTTGG...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTACCTGCCATTGGGTCTaGACCTGGAGACAGTATGAA +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCTCHWV*TWRQYE
Trigger: TTCATACTGTCTCCAGGTGCAGACCCAATGGCAGGT...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp TTGGTGATTTGGAAAACTCACTCGCCCTTCCTGAATCTCCTTTGTCTCATCTGCTCGGTTGGCCAGGACTaGAACCAATCAATGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LVIWKTHSPFLNLLCLICSVGQD*NQSMVQ
Trigger: CTGCACCATTGATTGGTTCCAGTCCTGGCCAACCGA...GCAGATGAGACAAAGGAGATTCAGGAAGGGCGAGTGAGTTTTCCAAATCACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTTCTTCACCCACTTATTaGCCTGTCCCTGAGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCSSPTY*PVPEGQ
Trigger: TTGACCCTCAGGGACAGGCCAATAAGTGGGTGAAGA...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTTCCTCTCCTGGACAATaGCATGGAAGAAGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCSSPGQ*HGRSKA
Trigger: GGCTTTGCTTCTTCCATGCCATTGTCCAGGAGAGGA...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTTTGGAGAGTATATCCTaGGCCAGCTCCTCAACCACT +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCLESIS*ASSSTT
Trigger: AGTGGTTGAGGAGCTGGCCCAGGATATACTCTCCAA...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAGTGATGGGTAGGACTTaGCTGCCCACATGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGVMGRT*LPTWLA
Trigger: TGCCAGCCATGTGGGCAGCCAAGTCCTACCCATCAC...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR CAA 72 bp TATTTCCATCTCCTGCTGCAACATCACATCCATCTGTaGTTCTGGACTCATGGGTCTGCTTTCTGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: YFHLLLQHHIHL*FWTHGSAFWVG
Trigger: ACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGATGGATGTGATGTTGCAGCAGGAGATGGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TTCTCAATCTTCAACTTGACATTCTCTGCTAAGCGCTaGGGCGCAGGCACATCGATCAAGGTCTTGGTCAAC +
Preference number: 4 (lower is better)
Translates to: FSIFNLTFSAKR*GAGTSIKVLVN
Trigger: GTTGACCAAGACCTTGATCGATGTGCCTGCGCCCAAGCGCTTAGCAGAGAATGTCAAGTTGAAGATTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp CAGCCATACAGTTGCCCCATTGTGATAGCCTTGGGGTaGATGATCTTGAACTCCACAGCAAACTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: QPYSCPIVIALG*MILNSTANSSI
Trigger: GATGGAAGAGTTTGCTGTGGAGTTCAAGATCATCAACCCCAAGGCTATCACAATGGGGCAACTGTATGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp AATTTTCACCATCATCATCGCTGTATCCTCAGAGGTTaGGATGAGCTGAGGCTGAAGGGCAGTGAGCTCTAC +
Preference number: 4 (lower is better)
Translates to: NFHHHHRCILRG*DELRLKGSELY
Trigger: GTAGAGCTCACTGCCCTTCAGCCTCAGCTCATCCAAACCTCTGAGGATACAGCGATGATGATGGTGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp AGCGACAGGCTTGTAGCCCATGCGGGTCTCATCAATTaGGGTTTCTGTCACAGATGCTATTTCTTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SDRLVAHAGLIN*GFCHRCYFLLL
Trigger: GAGAAGCAAGAAATAGCATCTGTGACAGAAACCCAAATTGATGAGACCCGCATGGGCTACAAGCCTGTCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TCTGATAACCATTCTGGAGCTGGGTTGGGGAAAGGATaGTCCAAGGCCACACCTCCAGTTAAAAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: SDNHSGAGLGKG*SKATPPVKRKY
Trigger: GTACTTCCTTTTAACTGGAGGTGTGGCCTTGGACAATCCTTTCCCCAACCCAGCTCCAGAATGGTTATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp GACCTTGTCCTTACAGGAAACCAACCATTCATTTTGGCATTGGGCCCGATAATCTGGGAGTGGCTCATGTaGTGTACAGAGTCACTCTTG +
Preference number: 4 (lower is better)
Translates to: DLVLTGNQPFILALGPIIWEWLM*CTESLL
Trigger: CAAGAGTGACTCTGTACATCACATGAGCCACTCCCA...GATTATCGGGCCCAATGCCAAAATGAATGGTTGGTTTCCTGTAAGGACAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTTTAGGACTTGTCCTTTaGTGGCTCGGCCAAGATCAA +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCLGLVL*WLGQDQ
Trigger: TTGATCTTGGCCGAGCCATCAAAGGACAAGTCCTAA...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp GGAAGCCCTGTACTTTTCAAGAAAATGACTCATGACCTATTTAGGACAGATGCCCCTGGTCACATACCTTaGTCGCCTGAGAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: GSPVLFKKMTHDLFRTDAPGHIP*SPERWQ
Trigger: CTGCCATCTCTCAGGCGATCAAGGTATGTGACCAGG...GGCATCTGTCCTAAATAGGTCATGAGTCATTTTCTTGAAAAGTACAGGGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR GCA 90 bp CAGAGGTCAGGTCTCAGGATTCACTGGAGAGATGCCAATTGGAAGCCCTGTACTTCCACAAATGACTCATaGTTGATCTGGTTATCCGAG +
Preference number: 4 (lower is better)
Translates to: QRSGLRIHWRDANWKPCTSTNDS*LIWLSE
Trigger: CTCGGATAACCAGATCAAGCATGAGTCATTTGTGGA...AGTACAGGGCTTCCAATTGGCATCTCTCCAGTGAATCCTGAGACCTGACCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CCA 90 bp CATTACCTCCTCCAGGTTAAAGTCGTTGGGAAGCTTGGAGAGTATATCCTGGGCCTTATAGAGTTCAGATaGCTCCTCATTGGCAGACAC +
Preference number: 4 (lower is better)
Translates to: HYLLQVKVVGKLGEYILGLIEFR*LLIGRH
Trigger: GTGTCTGCCAATGAGGAGCCATCTGAACTCTATAAG...GCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR CCA 90 bp CATTACCTCCTCCAGGTTAAAGTCGTTGGGAAGCTTGGAGAGTATATCCTGGGCGATACTGATGGTGACTaGTTGGTAGACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: HYLLQVKVVGKLGEYILGDTDGD*LVDLQQ
Trigger: CTGTTGAAGGTCTACCAACCAGTCACCATCAGTATC...GCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR CCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAGCTCTGGCTTCTCCTTaGCAGCCACAATGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGALASP*QPQCQG
Trigger: TCCTTGGCATTGTGGCTGCCAAGGAGAAGCCAGAGC...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTAGCTGGTTGGTTTCCTaGTTGTCCTTGGTGATGTCA +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCSWLVS*LSLVMS
Trigger: TGACATCACCAAGGACAACCAGGAAACCAACCAGCT...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp CATTACCTCCTCCAGGTTAAAGTCGTTGGGAAGCTTGGAGAGTATATCCTGGGCAGAAGCTGTGTGACATaGCAGTCTTATAGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: HYLLQVKVVGKLGEYILGRSCVT*QSYRVQ
Trigger: CTGAACTCTATAAGACTGTCATGTCACACAGCTTCT...GCCCAGGATATACTCTCCAAGCTTCCCAACGACTTTAACCTGGAGGAGGTAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp CAAAGAGAACAGCCAGTGCAAAGGCCCCGGGGAAGGAATAACCAGAAGGTTATTGATGTCTTCCACAAATaGCTCATGCTTGATCTGGTT +
Preference number: 4 (lower is better)
Translates to: QREQPVQRPRGRNNQKVIDVFHK*LMLDLV
Trigger: AACCAGATCAAGCATGAGTCATTTGTGGAAGACATC...AATAACCTTCTGGTTATTCCTTCCCCGGGGCCTTTGCACTGGCTGTTCTCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR TCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTAGGTTGGGGCTTCGATaGATATCTTTCCCATGGTTT +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCRLGLR*ISFPWF
Trigger: AAACCATGGGAAAGATATTCATCGAAGCCCCAACCT...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTGTCAACAGGAAGCCCTaGTATCTGCCAGGCACGGAT +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPVNRKP*YLPGTD
Trigger: ATCCGTGCCTGGCAGATAGCAGGGCTTCCTGTTGAC...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTACAGAAAAAGATGGCTaGAGAATGAACAGCGACAGG +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCTEKDG*RMNSDR
Trigger: CCTGTCGCTGTTCATTCTGCAGCCATCTTTTTCTGT...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTTGGGTAGGACTTGGCTaGCCACATGGCTGGCACTTT +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPWVGLG*PHGWHF
Trigger: AAAGTGCCAGCCATGTGGGCAGCCAAGTCCTACCCA...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGACTTGTCCCCAACTTCTaGTCTGCTACCCCACAGTGT +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGLVPNF*SATPQC
Trigger: ACACTGTGGGGTAGCAGAGCAGAAGTTGGGGACAAG...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp TTGGTGATTTGGAAAACTCACTCGCCCTTCCTGAATCTCCTTTGTCTCATCTGCTCTCTCCTTCTGTCCTaGCCGCTGTTTGCATCTTTT +
Preference number: 4 (lower is better)
Translates to: LVIWKTHSPFLNLLCLICSLLLS*PLFASF
Trigger: AAAAGATGCAAACAGCGGCCAGGACAGAAGGAGAGA...GCAGATGAGACAAAGGAGATTCAGGAAGGGCGAGTGAGTTTTCCAAATCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTCAGCTTGTAGCCAGGTaGCAGTTCTGTAGGACCACC +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPQLVAR*QFCRTT
Trigger: GGTGGTCCTACAGAACTGCCACCTGGCTACAAGCTG...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAGTCAGCAGCACTCCTTaGAAGAGCTGGTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKVSSTP*KSWLVS
Trigger: GGAAACCAACCAGCTCTTCCAAGGAGTGCTGCTGAC...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCGGCTGCCCACATGGCTaGCACTTTACCCACAAGCAT +
Preference number: 4 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFGCPHG*HFTHKH
Trigger: ATGCTTGTGGGTAAAGTGCCAGCCATGTGGGCAGCC...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAACTTGGCTGCCCACATaGCTGGCACTTTACCCACAA +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKTWLPT*LALYPQ
Trigger: TTGTGGGTAAAGTGCCAGCCATGTGGGCAGCCAAGT...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR CAA 72 bp CACATGGACAAATGCCTTAGGCAGGTGTCCTGTGCTTaGTCATATAGTCCTGTCAATGACCTACACAGCTCT +
Preference number: 4 (lower is better)
Translates to: HMDKCLRQVSCA*SYSPVNDLHSS
Trigger: AGAGCTGTGTAGGTCATTGACAGGACTATATGACAAAGCACAGGACACCTGCCTAAGGCATTTGTCCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR CAA 72 bp ATGGGAATATGCTGCTTGAACTTCTCAATCTTCAACTaGACATTCTCTGCTAAGCGCTTGGGCGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: MGICCLNFSIFN*TFSAKRLGAGT
Trigger: TGTGCCTGCGCCCAAGCGCTTAGCAGAGAATGTCAAGTTGAAGATTGAGAAGTTCAAGCAGCATATTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp ATAGAACATTGGCTTCCTGAAGCTTCTCAGTCATTCTaGGCTGGTCAGCTGCCACCATTACCCTTGTATCGT +
Preference number: 4 (lower is better)
Translates to: IEHWLPEASQSF*AGQLPPLPLYR
Trigger: ACGATACAAGGGTAATGGTGGCAGCTGACCAGCCAAGAATGACTGAGAAGCTTCAGGAAGCCAATGTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TCAAAGCAGCCATACAGTTGCCCCATTGTGATAGCCTaGGGGTTGATGATCTTGAACTCCACAGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: SKQPYSCPIVIA*GLMILNSTANS
Trigger: AGAGTTTGCTGTGGAGTTCAAGATCATCAACCCCAAGGCTATCACAATGGGGCAACTGTATGGCTGCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TATAATCCATTTGCGGTCATCAGTTATGGAAGACGCTaGTTCCCGGAAAGCATTGGCCAGGACACCATCTGT +
Preference number: 4 (lower is better)
Translates to: YNPFAVISYGRR*FPESIGQDTIC
Trigger: ACAGATGGTGTCCTGGCCAATGCTTTCCGGGAACAAGCGTCTTCCATAACTGATGACCGCAAATGGATTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TCTGGGAAGATGTTGTTTTTGGTGAGTTTCACACTCTaGGGCCTTGGGTTACGATCATCCATGCCCATGATC +
Preference number: 4 (lower is better)
Translates to: SGKMLFLVSFTL*GLGLRSSMPMI
Trigger: GATCATGGGCATGGATGATCGTAACCCAAGGCCCAAGAGTGTGAAACTCACCAAAAACAACATCTTCCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp AGAAGTTCTCCACTGCAGCTCTGTAAATTGTCTGGGTaGCTTGGACCAGCATCTTCCCATACCGTAAGAACA +
Preference number: 4 (lower is better)
Translates to: RSSPLQLCKLSG*LGPASSHTVRT
Trigger: TGTTCTTACGGTATGGGAAGATGCTGGTCCAAGCAACCCAGACAATTTACAGAGCTGCAGTGGAGAACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TTTGTTGATCATATTGGCAGCAATAGGACCTTGGCCTaGACCAAGGGAGATGGTCTGTGTTTTAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FVDHIGSNRTLA*TKGDGLCFSAS
Trigger: GGAGGCACTAAAACACAGACCATCTCCCTTGGTCAAGGCCAAGGTCCTATTGCTGCCAATATGATCAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp ACTCCTTGGAAGAGCTGGTTGGTTTCCTGGTTGTCCTaGGTGATGTCAGCATTCTCATGGAGACCAAATACT +
Preference number: 4 (lower is better)
Translates to: TPWKSWLVSWLS*VMSAFSWRPNT
Trigger: AGTATTTGGTCTCCATGAGAATGCTGACATCACCAAGGACAACCAGGAAACCAACCAGCTCTTCCAAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTCAACGGAGCCTGGGATaGCCTTGTCCTTACAGGAAA +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPQRSLG*PCPYRK
Trigger: TTTCCTGTAAGGACAAGGTCATCCCAGGCTCCGTTG...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACAATGCCAAGGAGTTaGTCTTGGAGACCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGTMPRS*SWRPKG
Trigger: ACCCTTGGGTCTCCAAGATCAACTCCTTGGCATTGT...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAACCTGGTTGTCCTTGGTaGTGTCAGCATTCTCATGGA +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKPGCPW*CQHSHG
Trigger: TCCATGAGAATGCTGACATCACCAAGGACAACCAGG...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp CTCCTAATTGGTGATTTGGAAAACTCACTCGCCCTTCCTGAATCTCCTTTGTCTCAGTTTCTGCAAGCCTaGCAAGTAGCGGTTCCTAAT +
Preference number: 4 (lower is better)
Translates to: LLIGDLENSLALPESPLSQFLQA*QVAVPN
Trigger: ATTAGGAACCGCTACTTGGCAGGCTTGCAGAAACTG...AGACAAAGGAGATTCAGGAAGGGCGAGTGAGTTTTCCAAATCACCAATTAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR GCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAGGAAGCCCTGCTATCTaGCAGGCACGGATTTTTATG +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKGSPAI*QARIFM
Trigger: CATAAAAATCCGTGCCTGGCAGATAGCAGGGCTTCC...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAACCTTGGCAGCCACAATaGCAAGGAGTTGATCTTGGA +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKPWQPQ*QGVDLG
Trigger: TCCAAGATCAACTCCTTGGCATTGTGGCTGCCAAGG...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTCAGGCTTGTAGCCCATaGGGGTCTCATCAATTTGGG +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPQACSP*GSHQFG
Trigger: CCCAAATTGATGAGACCCGCATGGGCTACAAGCCTG...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAATGATGCTACACAGCTaGCAACCCTTGTCCCCAACT +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKMMLHS*QPLSPT
Trigger: AGTTGGGGACAAGGGTTGGCAGCTGTGTAGCATCAT...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAAGGCACGGATTTTTATaGGGTCCCCTAAGGTGTTGC +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKRHGFL*GPLRCC
Trigger: GCAACACCTTAGGGGACCCCATAAAAATCCGTGCCT...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACTCCTTGGAAGAGCTaGTTGGTTTCCTGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGTPWKS*LVSWLS
Trigger: GGACAACCAGGAAACCAACCAGCTCTTCCAAGGAGT...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR CAA 72 bp TCCGTGTCCCTGTACTTCACGAAACTGAAGCACATATaGACCCAGTCTGCCTTCATCTTCTCCAAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SVSLYFTKLKHI*TQSAFIFSKFF
Trigger: GAAAAACTTGGAGAAGATGAAGGCAGACTGGGTCAATATGTGCTTCAGTTTCGTGAAGTACAGGGACACGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp CTTTCCCGGATTCGCTTCATGATCACCGAAGGGATGTaGTCTTTGTCGTATGTCTTGAGACTTTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: LSRIRFMITEGM*SLSYVLRLSKN
Trigger: GTTCTTGGAAAGTCTCAAGACATACGACAAAGACAACATCCCTTCGGTGATCATGAAGCGAATCCGGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TTGCTGAGGCTAAAATCAACGGAGCCTGGGATGACCTaGTCCTTACAGGAAACCAACCATTCATTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LLRLKSTEPGMT*SLQETNHSFWH
Trigger: ATGCCAAAATGAATGGTTGGTTTCCTGTAAGGACAAGGTCATCCCAGGCTCCGTTGATTTTAGCCTCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TTTTCACCCAGTCTCATGTACTCCACCCCCTGCTGTTaGAATGTTGCCTTCAGCAAGATGGGTTCAATAAAG +
Preference number: 4 (lower is better)
Translates to: FSPSLMYSTPCC*NVAFSKMGSIK
Trigger: CTTTATTGAACCCATCTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGAGTACATGAGACTGGGTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTAAGAGGACAAAATTTTaGTGGCTGTCTCATCTTCGA +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCKRTKF*WLSHLR
Trigger: TCGAAGATGAGACAGCCATCAAAATTTTGTCCTCTT...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTGTCCTTCTCAAACAGTaGGCGGCACACGTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPVLLKQ*AAHVVV
Trigger: TACAACAACGTGTGCCGCTCACTGTTTGAGAAGGAC...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGACACCTGGAGACAGTATaGAAATCAATGGTACGCAGC +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGHLETV*KSMVRS
Trigger: GCTGCGTACCATTGATTTTCATACTGTCTCCAGGTG...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGACATTCTGGAGAATGCTaGCGGGAAACTTCTCTGATG +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGHSGEC*RETSLM
Trigger: CATCAGAGAAGTTTCCCGTCAGCATTCTCCAGAATG...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTCTGAGATTGGGTCATTaGGGTAGGAACGCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPLRLGH*GRNAEG
Trigger: ACCTTCTGCGTTCCTACCTCAATGACCCAATCTCAG...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAACCTCTTCGTAATCATTaGGGAACATCTGGATCTGCC +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKPLRNH*GTSGSA
Trigger: GGCAGATCCAGATGTTCCTCAATGATTACGAAGAGG...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp TTAAGGCACATGGACAAATGCCTTAGGCAGGTGTCCTGTGCTTTGTCATATAGTGTGGCCACTCCTGACTaGAACATTATCTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LRHMDKCLRQVSCALSYSVATPD*NIIFFR
Trigger: CCTGAAAAAGATAATGTTGCAGTCAGGAGTGGCCAC...ACTATATGACAAAGCACAGGACACCTGCCTAAGGCATTTGTCCATGTGCCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR GCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTGGTTTCTGTCACAGATaGTATTTCTTGCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCGFCHR*YFLLLR
Trigger: TCTGAGAAGCAAGAAATAGCATCTGTGACAGAAACC...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCAGGAACATCTGGATCTaGCGCATGCTAATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFRNIWI*RMLILR
Trigger: CCTGAGGATTAGCATGCGGCAGATCCAGATGTTCCT...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTCAGTATGAAAATCAATaGTACGCAGCAACTGGAATC +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCQYENQ*YAATGI
Trigger: GATTCCAGTTGCTGCGTACCATTGATTTTCATACTG...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGATCCTGGACAATGGCATaGAAGAAGCAAAGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGSWTMA*KKQSPN
Trigger: GTTTGGGCTTTGCTTCTTCCATGCCATTGTCCAGGA...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAACTTTACAGTAGAACATaGACAGGAGGGACAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKLYSRT*TGGTAG
Trigger: TCCTGCTGTCCCTCCTGTCCATGTTCTACTGTAAAG...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTCTTGGAAGAGCTGGTTaGTTTCCTGGTTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPLGRAG*FPGCPW
Trigger: CCAAGGACAACCAGGAAACCAACCAGCTCTTCCAAG...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp GGAAGCCCTGTACTTTTCAAGAAAATGACTCATGACCTATTTAGGACAGATGCCCCCCGATTGGACTCATaGCAAGAACAATGTGAAGGT +
Preference number: 4 (lower is better)
Translates to: GSPVLFKKMTHDLFRTDAPRLDS*QEQCEG
Trigger: ACCTTCACATTGTTCTTGCCATGAGTCCAATCGGGG...GGCATCTGTCCTAAATAGGTCATGAGTCATTTTCTTGAAAAGTACAGGGCTTCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR CAA 72 bp GGGTTGCAGGCGATATTCAGGATGGGAATATGCTGCTaGAACTTCTCAATCTTCAACTTGACATTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GLQAIFRMGICC*NFSIFNLTFSA
Trigger: AGCAGAGAATGTCAAGTTGAAGATTGAGAAGTTCAAGCAGCATATTCCCATCCTGAATATCGCCTGCAACCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TTATCAACAAATTTGCCGAATCCATATTCCAGCATATaGGCGAGGCACGTGGTCTCTGTGGGCTTTATCTCA +
Preference number: 4 (lower is better)
Translates to: LSTNLPNPYSSI*ARHVVSVGFIS
Trigger: TGAGATAAAGCCCACAGAGACCACGTGCCTCGCCAATATGCTGGAATATGGATTCGGCAAATTTGTTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp TGCTTGAAGCAATTGGAGGTGGTTTCCTTCACCAGGTaGAAGAAAGTCTGTCTGTCATCATTGTCAATCAGG +
Preference number: 4 (lower is better)
Translates to: CLKQLEVVSFTR*KKVCLSSLSIR
Trigger: CCTGATTGACAATGATGACAGACAGACTTTCTTCAACCTGGTGAAGGAAACCACCTCCAATTGCTTCAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp ATCTCCTCAGACAGAACTTTCGAAGAGGACAAAATTTaGATGGCTGTCTCATCTTCGAGGATGTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ISSDRTFEEDKI*MAVSSSRMLPS
Trigger: TGAGGGCAACATCCTCGAAGATGAGACAGCCATCAAAATTTTGTCCTCTTCGAAAGTTCTGTCTGAGGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGACCATGGTTTCACAGATaGAGTTTTGAATGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGPWFHR*SFEWLG
Trigger: TCCCAGCCATTCAAAACTTCATCTGTGAAACCATGG...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAGAAGAACAAAGGGTCTaGGATTGGGTCATTGAGGTA +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKEEQRV*DWVIEV
Trigger: TACCTCAATGACCCAATCTCAGACCCTTTGTTCTTC...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR TCA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCCACAAGCATACTATTaGAGACTTCCTCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFPQAYY*RLPPAL
Trigger: CAGAGCTGGAGGAAGTCTTCAATAGTATGCTTGTGG...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCATGTACTCCACCCCCTaGTGTTTGAATGTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFMYSTP*CLNVAF
Trigger: GAAGGCAACATTCAAACAGCAGGGGGTGGAGTACAT...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTAACTTCCTCATCAATTaGCTTTCTTTCCTTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCNFLIN*LSFLQE
Trigger: CTCTTGAAGGAAAGAAAGGCAATTGATGAGGAAGTT...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AGTGAACCAACTTTCACAATCCAGGACATGGTGTTCATTGTGAATTCTGAGAACCCTCCAGGAATTTGTTaGCCACCAACTCTAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SEPTFTIQDMVFIVNSENPPGIC*PPTLRH
Trigger: ATGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGG...GTTCTCAGAATTCACAATGAACACCATGTCCTGGATTGTGAAAGTTGGTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAAAAATCAACGGAGCCTaGGATGACCTTGTCCTTACA +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKKINGA*DDLVLT
Trigger: TGTAAGGACAAGGTCATCCCAGGCTCCGTTGATTTT...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAGGTCCCTTCATaGATGGCTTTGTTGATCATA +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGTQVPS*MALLII
Trigger: TATGATCAACAAAGCCATCCATGAAGGGACCTGGGT...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTGGCTTTGTACAGCTCTaGAAGAACAAAGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPGFVQL*KNKGSE
Trigger: CTCAGACCCTTTGTTCTTCCAGAGCTGTACAAAGCC...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAATCATTGAGGAACATCTaGATCTGCCGCATGCTAATC +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKSLRNI*ICRMLI
Trigger: GATTAGCATGCGGCAGATCCAGATGTTCCTCAATGA...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp TGGTTTCTATTTTGTCTTCTTTCTGAGCCACTAAGACCGCAAGTGAACCAACTTGAAGGCATCCCCGATTaGACTCATGGCAAGAACAAT +
Preference number: 4 (lower is better)
Translates to: WFLFCLLSEPLRPQVNQLEGIPD*THGKNN
Trigger: ATTGTTCTTGCCATGAGTCCAATCGGGGATGCCTTC...AAGTTGGTTCACTTGCGGTCTTAGTGGCTCAGAAAGAAGACAAAATAGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
3UTR CAA 72 bp AGCCGTTCACTTGCATCTCTGAGTTGCCTCCTGAGCTaGAACACAGTGACATCACTGGATTTCTTTAAATAT +
Preference number: 4 (lower is better)
Translates to: SRSLASLSCLLS*NTVTSLDFFKY
Trigger: ATATTTAAAGAAATCCAGTGATGTCACTGTGTTCAAGCTCAGGAGGCAACTCAGAGATGCAAGTGAACGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp GTACTCGTAGCCATACAAGGCTTCTGTGGTTATCATTaGCACATGAACGTTCTTTTCCGTCCAATAGTATCG +
Preference number: 4 (lower is better)
Translates to: VLVAIQGFCGYH*HMNVLFRPIVS
Trigger: CGATACTATTGGACGGAAAAGAACGTTCATGTGCAAATGATAACCACAGAAGCCTTGTATGGCTACGAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp GAATTTTTCTTTCTGTTCATCAGTTCAAACTCGTCATaGAGATCTTGGAGTCGGTCTTCCACCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: EFFFLFISSNSS*RSWSRSSTSFS
Trigger: GCTGAAGCTGGTGGAAGACCGACTCCAAGATCTCAATGACGAGTTTGAACTGATGAACAGAAAGAAAAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGATCACAGATGAAGTTTTaGATGGCTGGGACTATCTTG +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGSQMKF*MAGTIL
Trigger: CAAGATAGTCCCAGCCATTCAAAACTTCATCTGTGA...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTCTGCTGTTTGAATGTTaGCTTCAGCAAGATGGGTTC +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPLLFEC*LQQDGF
Trigger: GAACCCATCTTGCTGAAGGCAACATTCAAACAGCAG...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAGCTCATCACTCTTGTTaGTATTTGCTAGAGACTGCA +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKAHHSC*YLLETA
Trigger: TGCAGTCTCTAGCAAATAGCAACAAGAGTGATGAGC...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR CAA 72 bp CAGCAGAGACACAGACTCAAGGGGTATGTATATACCTaGGGGATCCCATCAGAATTCTTAATAATTTCCAAG +
Preference number: 4 (lower is better)
Translates to: QQRHRLKGYVYT*GIPSEFLIISK
Trigger: CTTGGAAATTATTAAGAATTCTGATGGGATCCCCAAGGTATATACATACCCCTTGAGTCTGTGTCTCTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp GAGTCCTCTCAGGTCAATGATCTCGTCATAGATTTTTaGGTCACTTTCTGGCTTCAAATAATCCCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: ESSQVNDLVIDF*VTFWLQIIPEE
Trigger: TTCTTCGGGGATTATTTGAAGCCAGAAAGTGACCAAAAAATCTATGACGAGATCATTGACCTGAGAGGACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp CTCATCAATTTGGGTTTCTGTCACAGATGCTATTTCTaGCTTCTCAGAGATCTCCTCAGACAGAACTTTCGA +
Preference number: 4 (lower is better)
Translates to: LINLGFCHRCYF*LLRDLLRQNFR
Trigger: TCGAAAGTTCTGTCTGAGGAGATCTCTGAGAAGCAAGAAATAGCATCTGTGACAGAAACCCAAATTGATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR TCA 90 bp AGTGAACCAACTTTCACAATCCAGGACATGGTGTTCATTGTGAATTCTGAGAACCAAATGACTCATGCTTaGTCTGGTTATCCGAGAAGA +
Preference number: 4 (lower is better)
Translates to: SEPTFTIQDMVFIVNSENQMTHA*SGYPRR
Trigger: TCTTCTCGGATAACCAGATCAAGCATGAGTCATTTG...GTTCTCAGAATTCACAATGAACACCATGTCCTGGATTGTGAAAGTTGGTTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR TCA 90 bp TATTTGTTCCATACCTACACACATGTGTTAGGGACAACTGGACAAAAACGTGACCATGACAGCCACTTGTaGAGATGCAAATTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: YLFHTYTHVLGTTGQKRDHDSHL*RCKFQF
Trigger: AAACTGGAATTTGCATCTTCACAAGTGGCTGTCATG...GTCACGTTTTTGTCCAGTTGTCCCTAACACATGTGTGTAGGTATGGAACAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR GCA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACAGATGCTATTTCTTaGTTCTCAGAGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGTDAIS*FSEISS
Trigger: TGAGGAGATCTCTGAGAAGCAAGAAATAGCATCTGT...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp TATTCTGCCATCCTAAAAATATTTGTTCCATACCTACACACATGTGTTAGGGACTTCTTCACGCTCTCCTaGAAGTACTTGCACATGGAG +
Preference number: 4 (lower is better)
Translates to: YSAILKIFVPYLHTCVRDFFTLS*KYLHME
Trigger: CTCCATGTGCAAGTACTTCCAGGAGAGCGTGAAGAA...GTCCCTAACACATGTGTGTAGGTATGGAACAAATATTTTTAGGATGGCAGAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CCA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTATTTTGATCCCATTCTaGAGAATGCTGACGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPILIPF*RMLTGN
Trigger: GTTTCCCGTCAGCATTCTCCAGAATGGGATCAAAAT...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAACAAACATCGAAGGATTaGTATCTTTTCCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKQTSKD*YLFQCL
Trigger: CAAACACTGGAAAAGATAGCAATCCTTCGATGTTTG...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR GCA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCAATCTGATGAGCTCCTaGCTTAGAACAGTGTTCATA +
Preference number: 4 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFNLMSS*LRTVFI
Trigger: TATGAACACTGTTCTAAGGCAGGAGCTCATCAGATT...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CCA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAAGCTGTTTCTTATTCTaGGCACTTTCTAAAATCAAC +
Preference number: 4 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKSCFLF*ALSKIN
Trigger: GTTGATTTTAGAAAGTGCCCAGAATAAGAAACAGCT...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
3UTR CAA 72 bp GCAAATGCTGGTATTGGTTTCCCGGTTTACATCCACTaGATACAGAATCAAATTGTCTTTAAGATTTTGGGC +
Preference number: 4 (lower is better)
Translates to: ANAGIGFPVYIH*IQNQIVFKILG
Trigger: GCCCAAAATCTTAAAGACAATTTGATTCTGTATCAAGTGGATGTAAACCGGGAAACCAATACCAGCATTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
3UTR CAA 72 bp CTGAAAATTTTGGTTAAGATTTCATCTTCAAAGGCGTaGATGGAAATGATATTCAGATGGCGAGTGAATCGT +
Preference number: 4 (lower is better)
Translates to: LKILVKISSSKA*MEMIFRWRVNR
Trigger: ACGATTCACTCGCCATCTGAATATCATTTCCATCAACGCCTTTGAAGATGAAATCTTAACCAAAATTTTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS TCA 90 bp ACAGGCAGAGGCGGCAGCTCTGGCCGTGCCTGGGAGTGGCTCATGTaGTGTACAGAGTCACTCTTGTCAAGCTTCTGCGCTGAGCAATTG +
Preference number: 5 (lower is better)
Translates to: TGRGGSSGRAWEWLM*CTESLLSSFCAEQL
Trigger: CAATTGCTCAGCGCAGAAGCTTGACAAGAGTGACTCTGTACATCACATGAGCCACTCCCAGGCACGGCCAGAGCTGCCGCCTCTGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS TCA 90 bp TTGGCTCCCTGTGCACCTCTCGCCTGGTCACATACCTTGATCGCCTaGGAGATGGCAGCAGCAGCATTAGCCTCCTTCTCATCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: LAPCAPLAWSHTLIA*EMAAAALASFSSAC
Trigger: GCAGGCAGATGAGAAGGAGGCTAATGCTGCTGCTGCCATCTCTCAGGCGATCAAGGTATGTGACCAGGCGAGAGGTGCACAGGGAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS CCA 90 bp TTCAGATGGCTCCTCATTGGCAGACACAGGCAGAGGCGGCAGCTCTaGCCGTGCCTGGGAGTGGCTCATGTGATGTACAGAGTCACTCTT +
Preference number: 5 (lower is better)
Translates to: FRWLLIGRHRQRRQL*PCLGVAHVMYRVTL
Trigger: AAGAGTGACTCTGTACATCACATGAGCCACTCCCAGGCACGGCCAGAGCTGCCGCCTCTGCCTGTGTCTGCCAATGAGGAGCCATCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
ENSMUST00000213149.2
CDS GCA 90 bp CCTGCTGCAACATCACATCCATCTGTTGTTCTGGACTCATGGGTCTaGTTTCTGGGTGGGTCACACTGGAGTCGGTGGTGTTCTTTATGC +
Preference number: 5 (lower is better)
Translates to: PAATSHPSVVLDSWV*FLGGSHWSRWCSLC
Trigger: GCATAAAGAACACCACCGACTCCAGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGATGGATGTGATGTTGCAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS-3UTR CAA 90 bp CAGAGGTCAGGTCTCAGGATTCACTGGAGAGATGCCAATTGGAAGCCCTGTACTATACGTTTAGCAGTGTaGGCTCCCTGTGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: QRSGLRIHWRDANWKPCTIRLAV*APCAPL
Trigger: GAGAGGTGCACAGGGAGCCAACACTGCTAAACGTAT...AGTACAGGGCTTCCAATTGGCATCTCTCCAGTGAATCCTGAGACCTGACCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS TCA 90 bp CAGGGTCCAGGATGTGCGTTGCATCAGTGGGGGATAGAAGCTGTGTaGCATGACAGTCTTATAGAGTTCAGATGGCTCCTCATTGGCAGA +
Preference number: 5 (lower is better)
Translates to: QGPGCALHQWGIEAV*HDSLIEFRWLLIGR
Trigger: TCTGCCAATGAGGAGCCATCTGAACTCTATAAGACTGTCATGTCACACAGCTTCTATCCCCCACTGATGCAACGCACATCCTGGACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
ENSMUST00000213149.2
CDS CCA 90 bp TGGCAGTCCTTGACTGGTCTTGTCCCTAGGGATACTGATGGTGACTaGTTGGTAGACCTTCAACAGGTCTTTCAGCTTCATGTCTCGAGC +
Preference number: 5 (lower is better)
Translates to: WQSLTGLVPRDTDGD*LVDLQQVFQLHVSS
Trigger: GCTCGAGACATGAAGCTGAAAGACCTGTTGAAGGTCTACCAACCAGTCACCATCAGTATCCCTAGGGACAAGACCAGTCAAGGACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
ENSMUST00000213149.2
CDS-3UTR CAA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATGGCTGGGACTATCTaGTCGGGCCGCAAACATCGA +
Preference number: 5 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCMAGTI*SGRKHR
Trigger: TCGATGTTTGCGGCCCGACAAGATAGTCCCAGCCAT...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS TCA 90 bp TCCAGGATGTGCGTTGCATCAGTGGGGGATAGAAGCTGTGTGACATaGCAGTCTTATAGAGTTCAGATGGCTCCTCATTGGCAGACACAG +
Preference number: 5 (lower is better)
Translates to: SRMCVASVGDRSCVT*QSYRVQMAPHWQTQ
Trigger: CTGTGTCTGCCAATGAGGAGCCATCTGAACTCTATAAGACTGTCATGTCACACAGCTTCTATCCCCCACTGATGCAACGCACATCCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
ENSMUST00000213149.2
CDS CCA 90 bp CTGGACTCATGGGTCTGCTTTCTGGGTGGGTCACACTGGAGTCGGTaGTGTTCTTTATGCTCAAGGAGGATGAGAATTTGCATACAAACG +
Preference number: 5 (lower is better)
Translates to: LDSWVCFLGGSHWSR*CSLCSRRMRICIQT
Trigger: CGTTTGTATGCAAATTCTCATCCTCCTTGAGCATAAAGAACACCACCGACTCCAGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS CCA 90 bp TCTGTTGTTCTGGACTCATGGGTCTGCTTTCTGGGTGGGTCACACTaGAGTCGGTGGTGTTCTTTATGCTCAAGGAGGATGAGAATTTGC +
Preference number: 5 (lower is better)
Translates to: SVVLDSWVCFLGGSH*SRWCSLCSRRMRIC
Trigger: GCAAATTCTCATCCTCCTTGAGCATAAAGAACACCACCGACTCCAGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS CCA 90 bp ATCACATCCATCTGTTGTTCTGGACTCATGGGTCTGCTTTCTGGGTaGGTCACACTGGAGTCGGTGGTGTTCTTTATGCTCAAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: ITSICCSGLMGLLSG*VTLESVVFFMLKED
Trigger: ATCCTCCTTGAGCATAAAGAACACCACCGACTCCAGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGATGGATGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS CCA 90 bp CAACATCACATCCATCTGTTGTTCTGGACTCATGGGTCTGCTTTCTaGGTGGGTCACACTGGAGTCGGTGGTGTTCTTTATGCTCAAGGA +
Preference number: 5 (lower is better)
Translates to: QHHIHLLFWTHGSAF*VGHTGVGGVLYAQG
Trigger: TCCTTGAGCATAAAGAACACCACCGACTCCAGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGATGGATGTGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS-3UTR CAA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTTCCACCCCCTGCTGTTaGAATGTTGCCTTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCSTPCC*NVAFSK
Trigger: CTTGCTGAAGGCAACATTCAAACAGCAGGGGGTGGA...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AAACATCTGCCAGAGGTCAGGTCTCAGGATTCACTGGAGAGATGCCAATTGGAAACGTCCTCCAGGAATTaGTTGGCCACCAACTCTAAG +
Preference number: 5 (lower is better)
Translates to: KHLPEVRSQDSLERCQLETSSRN*LATNSK
Trigger: CTTAGAGTTGGTGGCCAACAAATTCCTGGAGGACGT...TTCCAATTGGCATCTCTCCAGTGAATCCTGAGACCTGACCTCTGGCAGATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CAA 90 bp ATTGGTGATTTGGAAAACTCACTCGCCCTTCCTGAATCTCCTTTGTCTCATCTGACCTCTGCCCGAATGTaGTCATCAAGCTCCACGTCC +
Preference number: 5 (lower is better)
Translates to: IGDLENSLALPESPLSHLTSARM*SSSSTS
Trigger: GGACGTGGAGCTTGATGACAACATTCGGGCAGAGGT...CAGATGAGACAAAGGAGATTCAGGAAGGGCGAGTGAGTTTTCCAAATCACCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CAA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTCCATTCATTTTGGCATaGGGCCCGATAATCCACCGT +
Preference number: 5 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCPFILA*GPIIHR
Trigger: ACGGTGGATTATCGGGCCCAATGCCAAAATGAATGG...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACACTGATGGTGACTGGTaGGTAGACCTTCAACAGGTC +
Preference number: 5 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDTDGDW*VDLQQV
Trigger: GACCTGTTGAAGGTCTACCAACCAGTCACCATCAGT...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR CAA 90 bp CTCCTAATTGGTGATTTGGAAAACTCACTCGCCCTTCCTGAATCTCCTTTGTCTACTCTAAGGCATCGGTaGGCCAGGACTGGAACCAAT +
Preference number: 5 (lower is better)
Translates to: LLIGDLENSLALPESPLSTLRHR*ARTGTN
Trigger: ATTGGTTCCAGTCCTGGCCAACCGATGCCTTAGAGT...AGACAAAGGAGATTCAGGAAGGGCGAGTGAGTTTTCCAAATCACCAATTAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CAA 90 bp TTGGTGATTTGGAAAACTCACTCGCCCTTCCTGAATCTCCTTTGTCTCATCTGCTGTATCCTCAGAGGTTaGGATGAGCTGAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LVIWKTHSPFLNLLCLICCILRG*DELRLK
Trigger: CTTCAGCCTCAGCTCATCCAAACCTCTGAGGATACA...GCAGATGAGACAAAGGAGATTCAGGAAGGGCGAGTGAGTTTTCCAAATCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CAA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAGGCCAGCGCCTGGAATaGGACACAATGATGCCATTG +
Preference number: 5 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKGQRLE*DTMMPL
Trigger: CAATGGCATCATTGTGTCCAATTCCAGGCGCTGGCC...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTGGGTTGGGGAAAGGATaGTCCAAGGCCACACCTCCA +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPGLGKG*SKATPP
Trigger: TGGAGGTGTGGCCTTGGACAATCCTTTCCCCAACCC...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCTCAGCAGACCTGCCATaGGGTCTGCACCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFSADLP*GLHLET
Trigger: TGTCTCCAGGTGCAGACCCAATGGCAGGTCTGCTGA...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp TTGGTCAGCCTGTTGAATCTGATGAGCTCCTGCCTTAGAACAGTGTTCATAGACCCGGTAACATCATCCTaGGCTTTGAGGTTGAACTTC +
Preference number: 5 (lower is better)
Translates to: LVSLLNLMSSCLRTVFIDPVTSS*ALRLNF
Trigger: GAAGTTCAACCTCAAAGCCAAGGATGATGTTACCGG...GTCTATGAACACTGTTCTAAGGCAGGAGCTCATCAGATTCAACAGGCTGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR CAA 90 bp AGTGAACCAACTTTCACAATCCAGGACATGGTGTTCATTGTGAATTCTGAGAACAGGAACACAGTACTCTaGGTGGCCACTCCTGACTGC +
Preference number: 5 (lower is better)
Translates to: SEPTFTIQDMVFIVNSENRNTVL*VATPDC
Trigger: GCAGTCAGGAGTGGCCACCAAGAGTACTGTGTTCCT...GTTCTCAGAATTCACAATGAACACCATGTCCTGGATTGTGAAAGTTGGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CAA 90 bp CTCCTAATTGGTGATTTGGAAAACTCACTCGCCCTTCCTGAATCTCCTTTGTCTTCCTCCAGGAATTTGTaGGCCACCAACTCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: LLIGDLENSLALPESPLSSSRNL*ATNSKA
Trigger: TGCCTTAGAGTTGGTGGCCAACAAATTCCTGGAGGA...AGACAAAGGAGATTCAGGAAGGGCGAGTGAGTTTTCCAAATCACCAATTAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CAA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAGAGCCTGGGATGACCTaGTCCTTACAGGAAACCAAC +
Preference number: 5 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKEPGMT*SLQETN
Trigger: GTTGGTTTCCTGTAAGGACAAGGTCATCCCAGGCTC...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTTCCAGCTCATCACTCTaGTTGCTATTTGCTAGAGAC +
Preference number: 5 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCSSSSL*LLFARD
Trigger: GTCTCTAGCAAATAGCAACAAGAGTGATGAGCTGGA...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTATAAAAAATAGGACCTTGGCCTaGACCAAGGGAGATGGTCTG +
Preference number: 5 (lower is better)
Translates to: NAKQVLCHGAGTQSLCIKNRTLA*TKGDGL
Trigger: CAGACCATCTCCCTTGGTCAAGGCCAAGGTCCTATT...TTTTATACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS GCA 90 bp GAGGAACAGGTTGCTGTTCAGTTTGATATCTTCATTGGGCAAGTCTaGATAATCCATCAGGAACTCAAGCCGTTCACTTGCATCTCTGAG +
Preference number: 5 (lower is better)
Translates to: EEQVAVQFDIFIGQV*IIHQELKPFTCISE
Trigger: CTCAGAGATGCAAGTGAACGGCTTGAGTTCCTGATGGATTATGCAGACTTGCCCAATGAAGATATCAAACTGAACAGCAACCTGTTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209154.3
CDS-3UTR CAA 90 bp GAAGTAGACGGCATGGGGATATCGATAGGCAAAGAGAACAGCCAGTGCAAAGGCCTATTCAGGAGAGTTTaGAAGGTTAGGATCAATTCA +
Preference number: 5 (lower is better)
Translates to: EVDGMGISIGKENSQCKGLFRRV*KVRINS
Trigger: TGAATTGATCCTAACCTTCAAAACTCTCCTGAATAG...GCCTTTGCACTGGCTGTTCTCTTTGCCTATCGATATCCCCATGCCGTCTACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTGGGTCCCCTAAGGTGTaGCTGAGGCTAAAATCAACG +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPGSPKV*LRLKST
Trigger: CGTTGATTTTAGCCTCAGCAACACCTTAGGGGACCC...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTGCCAAGGAGTTGATCTaGGAGACCCAAGGGTGTGAT +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPAKELI*ETQGCD
Trigger: ATCACACCCTTGGGTCTCCAAGATCAACTCCTTGGC...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTCACAATGCCAAGGAGTaGATCTTGGAGACCCAAGGG +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPHNAKE*ILETQG
Trigger: CCCTTGGGTCTCCAAGATCAACTCCTTGGCATTGTG...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTGAAGAGGACAAAATTTaGATGGCTGTCTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCEEDKI*MAVSSS
Trigger: CGAAGATGAGACAGCCATCAAAATTTTGTCCTCTTC...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGATGGTTGGTTTCCTGGTaGTCCTTGGTGATGTCAGCA +
Preference number: 5 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGWLVSW*SLVMSA
Trigger: TGCTGACATCACCAAGGACAACCAGGAAACCAACCA...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCCTTGGAAGAGCTGGTaGGTTTCCTGGTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFPWKSW*VSWLSL
Trigger: CAAGGACAACCAGGAAACCAACCAGCTCTTCCAAGG...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp TTGGTGATTTGGAAAACTCACTCGCCCTTCCTGAATCTCCTTTGTCTCATCTGCCTCTCGATAAAGAAATaGTACATAGACAGGGGAGTG +
Preference number: 5 (lower is better)
Translates to: LVIWKTHSPFLNLLCLICLSIKK*YIDRGV
Trigger: CACTCCCCTGTCTATGTACAATTTCTTTATCGAGAG...GCAGATGAGACAAAGGAGATTCAGGAAGGGCGAGTGAGTTTTCCAAATCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CAA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTGCAAACATCGAAGGATaGCTATCTTTTCCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCANIEG*LSFPVF
Trigger: AAACACTGGAAAAGATAGCAATCCTTCGATGTTTGC...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCAGGAGACGCCTATCTTaGTCATCAGTCACTCTGCCT +
Preference number: 5 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFRRRLS*SSVTLP
Trigger: AGGCAGAGTGACTGATGACAAAGATAGGCGTCTCCT...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTACTTTGGTCAGCCTGTaGAATCTGATGAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPTLVSL*NLMSSC
Trigger: GCAGGAGCTCATCAGATTCAACAGGCTGACCAAAGT...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS CCA 90 bp TTGCTCATGAGCAGATTTCGGCTACTTTCAAAGACATCTTCTATCTaGTCAGGCCAGAGGAACAGGTTGCTGTTCAGTTTGATATCTTCA +
Preference number: 5 (lower is better)
Translates to: LLMSRFRLLSKTSSI*SGQRNRLLFSLISS
Trigger: TGAAGATATCAAACTGAACAGCAACCTGTTCCTCTGGCCTGACCAGATAGAAGATGTCTTTGAAAGTAGCCGAAATCTGCTCATGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209154.3
CDS-3UTR CAA 90 bp TCCCTCGAACCAGCTCAACGATCTGTGCGATCTGGTCATTGCTCTTTTTCAGAAACATCATCCTTGGCTTaGAGGTTGAACTTCATTTTT +
Preference number: 5 (lower is better)
Translates to: SLEPAQRSVRSGHCSFSETSSLA*RLNFIF
Trigger: AAAAATGAAGTTCAACCTCAAAGCCAAGGATGATGT...TTCTGAAAAAGAGCAATGACCAGATCGCACAGATCGTTGAGCTGGTTCGAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213149.2
CDS-3UTR CAA 90 bp ATTGGTGATTTGGAAAACTCACTCGCCCTTCCTGAATCTCCTTTGTCTCATCTGTGGCATCAGCTTCTTTaGTCTCCAGCTCAATTTTCA +
Preference number: 5 (lower is better)
Translates to: IGDLENSLALPESPLSHLWHQLL*SPAQFS
Trigger: TGAAAATTGAGCTGGAGACAAAAGAAGCTGATGCCA...CAGATGAGACAAAGGAGATTCAGGAAGGGCGAGTGAGTTTTCCAAATCACCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CAA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTTTGGTATCAGAGAACTaGATGACAGATAGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCLVSEN*MTDSLF
Trigger: AAACAAGCTATCTGTCATCAAGTTCTCTGATACCAA...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTGGTGTGATCATGAAGTaGAGGAGACAGACTTTCACG +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPGVIMK*RRQTFT
Trigger: CGTGAAAGTCTGTCTCCTCAACTTCATGATCACACC...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAACCCAATCCCTATGTCCATACTTTGATATTTaGCATGACATCTTCCATCAG +
Preference number: 5 (lower is better)
Translates to: LTNAKQVLCHGAGTQSLCPYFDI*HDIFHQ
Trigger: CTGATGGAAGATGTCATGCAAAATATCAAAGTATGG...ACATAGGGATTGGGTTCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGAGCTTTGTTGATCATATaGGCAGCAATAGGACCTTGG +
Preference number: 5 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGALLII*AAIGPW
Trigger: CCAAGGTCCTATTGCTGCCAATATGATCAACAAAGC...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTGGCTCGTTGGTCATTTaGATCCCATTCTGGAGAATG +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPGSLVI*IPFWRM
Trigger: CATTCTCCAGAATGGGATCAAAATGACCAACGAGCC...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTGTTTCCTGGTTGTCCTaGGTGATGTCAGCATTCTCA +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPVSWLS*VMSAFS
Trigger: TGAGAATGCTGACATCACCAAGGACAACCAGGAAAC...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AGATTGAATTTAGACCTGACAAATGCTAAGCAAGTACTCTGCCATGGAGCTGGATCCAGGTTAAAGTCGTaGGGAAGCTTGGAGAGTATA +
Preference number: 5 (lower is better)
Translates to: RLNLDLTNAKQVLCHGAGSRLKS*GSLESI
Trigger: TATACTCTCCAAGCTTCCCAACGACTTTAACCTGGA...TCCAGCTCCATGGCAGAGTACTTGCTTAGCATTTGTCAGGTCTAAATTCAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTATTAGGACTTGTCCTTaGATGGCTCGGCCAAGATCA +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPIRTCP*MARPRS
Trigger: TGATCTTGGCCGAGCCATCAAAGGACAAGTCCTAAT...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCCCACAAGCATACTATaGAAGACTTCCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFPTSIL*KTSSSS
Trigger: AGAGCTGGAGGAAGTCTTCAATAGTATGCTTGTGGG...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp TATTTGTTCCATACCTACACACATGTGTTAGGGACAACTGGACAAAAACGTGACAATTGTGTCCACCTCTaGTCTCTTGCTATTCAGGAG +
Preference number: 5 (lower is better)
Translates to: YLFHTYTHVLGTTGQKRDNCVHL*SLAIQE
Trigger: CTCCTGAATAGCAAGAGACAAGAGGTGGACACAATT...GTCACGTTTTTGTCCAGTTGTCCCTAACACATGTGTGTAGGTATGGAACAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS-3UTR CAA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCAACCAACCATTCATTTaGGCATTGGGCCCGATAATC +
Preference number: 5 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFNQPFI*ALGPII
Trigger: GATTATCGGGCCCAATGCCAAAATGAATGGTTGGTT...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTGACACAATGATGCCATaGTCAACAGAGAAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPDTMMP*STEKES
Trigger: TGACTCCTTCTCTGTTGACAATGGCATCATTGTGTC...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTCACAGATGCTATTTCTaGCTTCTCAGAGATCTCCTC +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPHRCYF*LLRDLL
Trigger: GAGGAGATCTCTGAGAAGCAAGAAATAGCATCTGTG...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTAGCTCATCACTCTTGTaGCTATTTGCTAGAGACTGC +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPSSSLL*LFARDC
Trigger: GCAGTCTCTAGCAAATAGCAACAAGAGTGATGAGCT...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCAGGGAGAAAAGTAGCTaGTCCTTCTCAAACAGTGAG +
Preference number: 5 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFREKSS*SFSNSE
Trigger: CTCACTGTTTGAGAAGGACAAGCTACTTTTCTCCCT...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS CCA 90 bp TTCAGGGTTAACAGTTCCAAGAATCATGTTGTAGCCTTTCAAATCTaGGAAGAGTATAGATTCCACCTTGGGGATCCCATCAGAATTCTT +
Preference number: 5 (lower is better)
Translates to: FRVNSSKNHVVAFQI*EEYRFHLGDPIRIL
Trigger: AAGAATTCTGATGGGATCCCCAAGGTGGAATCTATACTCTTCCCAGATTTGAAAGGCTACAACATGATTCTTGGAACTGTTAACCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209154.3
CDS-3UTR CAA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCTTCACAGATGAAGTTTaGAATGGCTGGGACTATCTT +
Preference number: 5 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFFTDEV*NGWDYL
Trigger: AAGATAGTCCCAGCCATTCAAAACTTCATCTGTGAA...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp CCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCCTAGTTTTTACTCCTTCATGGATGGCTTTGTaGATCATATTGGCAGCAATA +
Preference number: 5 (lower is better)
Translates to: PSMCHKPPGCDIFLVFTPSWMAL*IILAAI
Trigger: TATTGCTGCCAATATGATCAACAAAGCCATCCATGA...AGGAGTAAAAACTAGGAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS-3UTR CAA 90 bp AAGTATATCCATTGGCCAAGTATGTGCCATAAACCTCCAGGTTGTGACATTTTCAAACTTCCTCATCAATaGCCTTTCTTTCCTTCAAGA +
Preference number: 5 (lower is better)
Translates to: KYIHWPSMCHKPPGCDIFKLPHQ*PFFPSR
Trigger: TCTTGAAGGAAAGAAAGGCAATTGATGAGGAAGTTT...GAAAATGTCACAACCTGGAGGTTTATGGCACATACTTGGCCAATGGATATACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS TCA 72 bp GGCGGCAGCTCTGGCCGTGCCTGGGAGTGGCTCATGTaGTGTACAGAGTCACTCTTGTCAAGCTTCTGCGCT +
Preference number: 6 (lower is better)
Translates to: GGSSGRAWEWLM*CTESLLSSFCA
Trigger: AGCGCAGAAGCTTGACAAGAGTGACTCTGTACATCACATGAGCCACTCCCAGGCACGGCCAGAGCTGCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS TCA 72 bp TGTGCACCTCTCGCCTGGTCACATACCTTGATCGCCTaGGAGATGGCAGCAGCAGCATTAGCCTCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: CAPLAWSHTLIA*EMAAAALASFS
Trigger: TGAGAAGGAGGCTAATGCTGCTGCTGCCATCTCTCAGGCGATCAAGGTATGTGACCAGGCGAGAGGTGCACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208910.2
CDS GCA 72 bp GATGCTACACAGCTGCCAACCCTTGTCCCCAACTTCTaGTCTGCTACCCCACAGTGTCTTCTCCACCTGAGT +
Preference number: 6 (lower is better)
Translates to: DATQLPTLVPNF*SATPQCLLHLS
Trigger: ACTCAGGTGGAGAAGACACTGTGGGGTAGCAGAGCAGAAGTTGGGGACAAGGGTTGGCAGCTGTGTAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS CCA 72 bp CTACCAGGTATCCAATTACCCAGATTCCCAGGTACCTaGAAGAAGGTCAGGCGGGCCAATAGGTCAGCCACG +
Preference number: 6 (lower is better)
Translates to: LPGIQLPRFPGT*KKVRRANRSAT
Trigger: CGTGGCTGACCTATTGGCCCGCCTGACCTTCTTCCAGGTACCTGGGAATCTGGGTAATTGGATACCTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS TCA 72 bp CTGCTCTGCTACCCCACAGTGTCTTCTCCACCTGAGTaGGCTACCAGGTATCCAATTACCCAGATTCCCAGG +
Preference number: 6 (lower is better)
Translates to: LLCYPTVSSPPE*ATRYPITQIPR
Trigger: CCTGGGAATCTGGGTAATTGGATACCTGGTAGCTCACTCAGGTGGAGAAGACACTGTGGGGTAGCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS CCA 72 bp CTGGACTCATGGGTCTGCTTTCTGGGTGGGTCACACTaGAGTCGGTGGTGTTCTTTATGCTCAAGGAGGATG +
Preference number: 6 (lower is better)
Translates to: LDSWVCFLGGSH*SRWCSLCSRRM
Trigger: CATCCTCCTTGAGCATAAAGAACACCACCGACTCCAGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS GCA 72 bp ACATCACATCCATCTGTTGTTCTGGACTCATGGGTCTaGTTTCTGGGTGGGTCACACTGGAGTCGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: TSHPSVVLDSWV*FLGGSHWSRWC
Trigger: ACACCACCGACTCCAGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGATGGATGTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS TCA 72 bp ACTTCTGCTCTGCTACCCCACAGTGTCTTCTCCACCTaGGTGAGCTACCAGGTATCCAATTACCCAGATTCC +
Preference number: 6 (lower is better)
Translates to: TSALLPHSVFST*VSYQVSNYPDS
Trigger: GGAATCTGGGTAATTGGATACCTGGTAGCTCACTCAGGTGGAGAAGACACTGTGGGGTAGCAGAGCAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208701.2
CDS CCA 72 bp TGGGTCTGCTTTCTGGGTGGGTCACACTGGAGTCGGTaGTGTTCTTTATGCTCAAGGAGGATGAGAATTTGC +
Preference number: 6 (lower is better)
Translates to: WVCFLGGSHWSR*CSLCSRRMRIC
Trigger: GCAAATTCTCATCCTCCTTGAGCATAAAGAACACCACCGACTCCAGTGTGACCCACCCAGAAAGCAGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS CCA 72 bp ATCTGTTGTTCTGGACTCATGGGTCTGCTTTCTGGGTaGGTCACACTGGAGTCGGTGGTGTTCTTTATGCTC +
Preference number: 6 (lower is better)
Translates to: ICCSGLMGLLSG*VTLESVVFFML
Trigger: GAGCATAAAGAACACCACCGACTCCAGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS CAA 90 bp CAGTCCTTGACTGGTCTTGTCCCTAGGGATACTGATGGTGACTGGTaGGTAGACCTTCAACAGGTCTTTCAGCTTCATGTCTCGAGCTGT +
Preference number: 6 (lower is better)
Translates to: QSLTGLVPRDTDGDW*VDLQQVFQLHVSSC
Trigger: ACAGCTCGAGACATGAAGCTGAAAGACCTGTTGAAGGTCTACCAACCAGTCACCATCAGTATCCCTAGGGACAAGACCAGTCAAGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
ENSMUST00000213149.2
CDS TCA 72 bp GGATGTGCGTTGCATCAGTGGGGGATAGAAGCTGTGTaGCATGACAGTCTTATAGAGTTCAGATGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GCALHQWGIEAV*HDSLIEFRWLL
Trigger: GAGGAGCCATCTGAACTCTATAAGACTGTCATGTCACACAGCTTCTATCCCCCACTGATGCAACGCACATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
ENSMUST00000213149.2
CDS TCA 72 bp TGCGTTGCATCAGTGGGGGATAGAAGCTGTGTGACATaGCAGTCTTATAGAGTTCAGATGGCTCCTCATTGG +
Preference number: 6 (lower is better)
Translates to: CVASVGDRSCVT*QSYRVQMAPHW
Trigger: CCAATGAGGAGCCATCTGAACTCTATAAGACTGTCATGTCACACAGCTTCTATCCCCCACTGATGCAACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
ENSMUST00000213149.2
CDS CAA 72 bp ACTGGTCTTGTCCCTAGGGATACTGATGGTGACTGGTaGGTAGACCTTCAACAGGTCTTTCAGCTTCATGTC +
Preference number: 6 (lower is better)
Translates to: TGLVPRDTDGDW*VDLQQVFQLHV
Trigger: GACATGAAGCTGAAAGACCTGTTGAAGGTCTACCAACCAGTCACCATCAGTATCCCTAGGGACAAGACCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
ENSMUST00000213149.2
CDS CAA 90 bp TTTACTTTCTATTTCCATCTCCTGCTGCAACATCACATCCATCTGTaGTTCTGGACTCATGGGTCTGCTTTCTGGGTGGGTCACACTGGA +
Preference number: 6 (lower is better)
Translates to: FTFYFHLLLQHHIHL*FWTHGSAFWVGHTG
Trigger: TCCAGTGTGACCCACCCAGAAAGCAGACCCATGAGTCCAGAACAACAGATGGATGTGATGTTGCAGCAGGAGATGGAAATAGAAAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS TCA 72 bp GAGGTTTTAGATGCTGTGAATGCTAATGGCAGTCCTTaGCTGGTCTTGTCCCTAGGGATACTGATGGTGACT +
Preference number: 6 (lower is better)
Translates to: EVLDAVNANGSP*LVLSLGILMVT
Trigger: AGTCACCATCAGTATCCCTAGGGACAAGACCAGTCAAGGACTGCCATTAGCATTCACAGCATCTAAAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209154.3
CDS CCA 72 bp TTGACTGGTCTTGTCCCTAGGGATACTGATGGTGACTaGTTGGTAGACCTTCAACAGGTCTTTCAGCTTCAT +
Preference number: 6 (lower is better)
Translates to: LTGLVPRDTDGD*LVDLQQVFQLH
Trigger: ATGAAGCTGAAAGACCTGTTGAAGGTCTACCAACCAGTCACCATCAGTATCCCTAGGGACAAGACCAGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
ENSMUST00000213149.2
CDS TCA 72 bp GTTGAGGTTTTAGATGAAGTACCTAATGGCAGTCCTTaGCTGGTCTTGTCCCTAGGGATACTGATGGTGACT +
Preference number: 6 (lower is better)
Translates to: VEVLDEVPNGSP*LVLSLGILMVT
Trigger: AGTCACCATCAGTATCCCTAGGGACAAGACCAGTCAAGGACTGCCATTAGGTACTTCATCTAAAACCTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000046993.4
CDS CCA 72 bp AGCAGATTTCGGCTACTTTCAAAGACATCTTCTATCTaGTCAGGCCAGAGGAACAGGTTGCTGTTCAGTTTG +
Preference number: 6 (lower is better)
Translates to: SRFRLLSKTSSI*SGQRNRLLFSL
Trigger: CAAACTGAACAGCAACCTGTTCCTCTGGCCTGACCAGATAGAAGATGTCTTTGAAAGTAGCCGAAATCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209154.3
CDS CAA 72 bp TCGGTGGTGTTCTTTATGCTCAAGGAGGATGAGAATTaGCATACAAACGGCATCCCGGTAACATCATCCTTG +
Preference number: 6 (lower is better)
Translates to: SVVFFMLKEDEN*HTNGIPVTSSL
Trigger: CAAGGATGATGTTACCGGGATGCCGTTTGTATGCAAATTCTCATCCTCCTTGAGCATAAAGAACACCACCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000046993.4
ENSMUST00000209154.3
CDS GCA 72 bp TTCAAAGACATCTTCTATAGACTCACTGGGCAAGTCTaGATAATCCATCAGGAACTCAAGCCGTTCACTTGC +
Preference number: 6 (lower is better)
Translates to: FKDIFYRLTGQV*IIHQELKPFTC
Trigger: GCAAGTGAACGGCTTGAGTTCCTGATGGATTATGCAGACTTGCCCAGTGAGTCTATAGAAGATGTCTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000046993.4
CDS GCA 72 bp GTTGCTGTTCAGTTTGATATCTTCATTGGGCAAGTCTaGATAATCCATCAGGAACTCAAGCCGTTCACTTGC +
Preference number: 6 (lower is better)
Translates to: VAVQFDIFIGQV*IIHQELKPFTC
Trigger: GCAAGTGAACGGCTTGAGTTCCTGATGGATTATGCAGACTTGCCCAATGAAGATATCAAACTGAACAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209154.3
CDS CAA 72 bp AAGACATCTTCTATCTGGTCAGGCCAGAGGAACAGGTaGCTGTTCAGTTTGATATCTTCATTGGGCAAGTCT +
Preference number: 6 (lower is better)
Translates to: KTSSIWSGQRNR*LFSLISSLGKS
Trigger: AGACTTGCCCAATGAAGATATCAAACTGAACAGCAACCTGTTCCTCTGGCCTGACCAGATAGAAGATGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209154.3
CDS CCA 72 bp AACAGTTCCAAGAATCATGTTGTAGCCTTTCAAATCTaGGAAGAGTATAGATTCCACCTTGGGGATCCCATC +
Preference number: 6 (lower is better)
Translates to: NSSKNHVVAFQI*EEYRFHLGDPI
Trigger: GATGGGATCCCCAAGGTGGAATCTATACTCTTCCCAGATTTGAAAGGCTACAACATGATTCTTGGAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209154.3