RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000005237

Ensembl transcript IDs: ENSMUST00000035539.12, ENSMUST00000108659.2, ENSMUST00000208777.2

Found 1076 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTGTCAGAGTGTCACTATATGCTAGATTCAGCTAAAGTCAAAGCCTaGGATCCAGCTTTAGTTCAAGGTCCTAGGGCTTCCGACCCTCTC +
Preference number: 1 (lower is better)
Translates to: LSECHYMLDSAKVKA*DPALVQGPRASDPL
Trigger: GAGAGGGTCGGAAGCCCTAGGACCTTGAACTAAAGCTGGATCTCAGGCTTTGACTTTAGCTGAATCTAGCATATAGTGACACTCTGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
3UTR-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCTAAAGTCAAAGCCTaGGATCCAGCTTTAGTTCAA +
Preference number: 2 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAKVKA*DPALVQ
Trigger: TTGAACTAAAGCTGGATCTCAGGCTTTGACTTTAGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
3UTR TCA 72 bp TGTCACTATATGCTAGATTCAGCTAAAGTCAAAGCCTaGGATCCAGCTTTAGTTCAAGGTCCTAGGGCTTCC +
Preference number: 3 (lower is better)
Translates to: CHYMLDSAKVKA*DPALVQGPRAS
Trigger: GGAAGCCCTAGGACCTTGAACTAAAGCTGGATCTCAGGCTTTGACTTTAGCTGAATCTAGCATATAGTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGGAGCCCCCGCGATaGAGGTGCAGTGCCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGEPPR*RCSAVV
Trigger: GACCACGGCACTGCACCTTCATCGCGGGGGCTCCCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTGTGCTCCGCCAGCTaGAGCAGAGCGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVCSAS*SRALVG
Trigger: CCCCACCAGCGCTCTGCTTCAGCTGGCGGAGCACAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTGTGCTCCGCCAGCTaGAGCAGAGCGCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVCSAS*SRALVG
Trigger: CCCCACCAGCGCTCTGCTTCAGCTGGCGGAGCACAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGTCCGGGCCTCTGTaGTCTGGGAGGCCACGTCAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGSGPL*SGRPRQ
Trigger: CTGACGTGGCCTCCCAGATCACAGAGGCCCGGACCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAAGCGGGCCAGACTCTaGCTCCCGCTGCCCCCGATC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFKRARL*LPLPPI
Trigger: GATCGGGGGCAGCGGGAGGCAGAGTCTGGCCCGCTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAAGCGGGCCAGACTCTaGCTCCCGCTGCCCCCGATC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFKRARL*LPLPPI
Trigger: GATCGGGGGCAGCGGGAGGCAGAGTCTGGCCCGCTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAAGCCGAGCAGCAATaGGGGCCTGGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFEAEQQ*GPGPGP
Trigger: TGGGCCAGGGCCAGGCCCCCATTGCTGCTCGGCTTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAAGCCGAGCAGCAATaGGGGCCTGGCCCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFEAEQQ*GPGPGP
Trigger: TGGGCCAGGGCCAGGCCCCCATTGCTGCTCGGCTTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGCCTGCAGTGGACTaGGGAGCTCGGACAACTCGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGPAVD*GARTTR
Trigger: CCGAGTTGTCCGAGCTCCTCAGTCCACTGCAGGCCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGCGCAACAGGGAAGTaGGGGCGCGCAGGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSATGK*GRAGRS
Trigger: ACTTCGGCCTGCGCGCCCTCACTTCCCTGTTGCGCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGCGCAACAGGGAAGTaGGGGCGCGCAGGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSATGK*GRAGRS
Trigger: ACTTCGGCCTGCGCGCCCTCACTTCCCTGTTGCGCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTGCGGCCATCCGGTaGTCTCTCTGGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCAAIR*SLWASS
Trigger: CGAGGAGGCCCAGAGAGAGCACCGGATGGCCGCACA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCACTGCCTCCCACTTaGTGCTGGAGCCCCCGACCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPLPPT*CWSPRP
Trigger: AGGTCGGGGGCTCCAGCAGCAAGTGGGAGGCAGTGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGAAGCGGTGGGCCATaGCTGTGTGCTCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGSGGP*LCAPPA
Trigger: AGCTGGCGGAGCACACAGGCATGGCCCACCGCTTCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCCAGGGACAGGGCATaGAAGCGGTGGGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPRDRA*KRWAMP
Trigger: AGGCATGGCCCACCGCTTCCATGCCCTGTCCCTGGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCGGGCTCTGGCTCCTaGCCATCAGGGAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSGSGS*PSGSRE
Trigger: TTCCCTGCTCCCTGATGGTCAGGAGCCAGAGCCCGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGGCGGAACAGCCCATaGGCCATGGACTCCATGGCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRRNSP*AMDSMA
Trigger: AGCCATGGAGTCCATGGCTCATGGGCTGTTCCGCCG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCCAGTGCCTCTCTCTaGGGGCTGGATTCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPSASL*GLDSAG
Trigger: ACCTGCGGAATCCAGCCCTCAGAGAGAGGCACTGGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAATGCCACTCGGTCCTaGCGCAGGGAGCGGACGATC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFNATRS*RRERTI
Trigger: GATCGTCCGCTCCCTGCGTCAGGACCGAGTGGCATT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGCAAGGCGCCCAGCTaGCATCTCCTTGAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRKAPS*HLLEQG
Trigger: ACCCTGCTCAAGGAGATGGCAGCTGGGCGCCTTGCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCCAGACTCGGGCTCTaGCTCCTGACCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFARLGL*LLTIRE
Trigger: CTCCCTGATGGTCAGGAGCCAGAGCCCGAGTCTGGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCCAGACTCGGGCTCTaGCTCCTGACCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFARLGL*LLTIRE
Trigger: CTCCCTGATGGTCAGGAGCCAGAGCCCGAGTCTGGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTCCTCGTCCCGCATaGCCATCAGCATGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSPRPA*PSAWRA
Trigger: TGCGCGCCATGCTGATGGCCATGCGGGACGAGGAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTCCTCGTCCCGCATaGCCATCAGCATGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSPRPA*PSAWRA
Trigger: TGCGCGCCATGCTGATGGCCATGCGGGACGAGGAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGGCTGCACAGCCTCTaGGTTACGGGACTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFWLHSL*VTGLAQ
Trigger: CTGGGCCAGTCCCGTAACCCAGAGGCTGTGCAGCCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGCTGCACAGCCTCTaGGTTACGGGACTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFWLHSL*VTGLAQ
Trigger: CTGGGCCAGTCCCGTAACCCAGAGGCTGTGCAGCCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTTTCCAGTACCTGCTaGGCCTTTGGGGGAGCCCCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLSSTC*AFGGAP
Trigger: GGGGGCTCCCCCAAAGGCCCAGCAGGTACTGGAAAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCACAGCGGGACACAGTaGCTGGAGAGGCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFHSGTQ*LERPQP
Trigger: TGGCTGTGGCCTCTCCAGCCACTGTGTCCCGCTGTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGATCTTCGCCGGGGTaGGCAGGAAGCGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGSSPG*AGSAVP
Trigger: TGGTACAGCGCTTCCTGCCCACCCCGGCGAAGATCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAAGCAGAGCGCTGGTaGGGTCTACACCGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFEAERW*GLHRGT
Trigger: TGTCCCCCGGTGTAGACCCCACCAGCGCTCTGCTTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAAGCAGAGCGCTGGTaGGGTCTACACCGGGGGACA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFEAERW*GLHRGT
Trigger: TGTCCCCCGGTGTAGACCCCACCAGCGCTCTGCTTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACCGGATCCGCTCTTTaGACAGGGCCTGCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTGSAL*TGPARL
Trigger: CAGACGAGCAGGCCCTGTTCAAAGAGCGGATCCGGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGAGAATTCCACCTGTaGCCCACCTCCCCGCACATC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGEFHL*PTSPHI
Trigger: GATGTGCGGGGAGGTGGGTCACAGGTGGAATTCTCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGCATCTGTGCGATCTaGTCCAGTGCAGCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRICAI*SSAAVW
Trigger: CCACACGGCTGCACTGGATCAGATCGCACAGATGCG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTTCCTCTGTTCCCCTaGGCCGGTGATGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLPLFP*AGDGPC
Trigger: ACAAGGGCCATCACCGGCTCAGGGGAACAGAGGAAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTTCCTCTGTTCCCCTaGGCCGGTGATGGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLPLFP*AGDGPC
Trigger: ACAAGGGCCATCACCGGCTCAGGGGAACAGAGGAAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTTGACGACGAGCACTaGCCACTGGCTGGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVDDEH*PLAGGQ
Trigger: TTGCCCTCCAGCCAGTGGTCAGTGCTCGTCGTCAAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTTGACGACGAGCACTaGCCACTGGCTGGAGGGCAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVDDEH*PLAGGQ
Trigger: TTGCCCTCCAGCCAGTGGTCAGTGCTCGTCGTCAAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGCGAATCCAATTCCTaGAGGGGTCTCCCACGGGAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGESNS*RGLPRD
Trigger: GTCCCGTGGGAGACCCCTTCAGGAATTGGATTCGCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCACCGGGGGACAGGATaGATACCAGTGGGGATCTCG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFHRGTG*IPVGIS
Trigger: CGAGATCCCCACTGGTATTCATCCTGTCCCCCGGTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCACCGGGGGACAGGATaGATACCAGTGGGGATCTCG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHRGTG*IPVGIS
Trigger: CGAGATCCCCACTGGTATTCATCCTGTCCCCCGGTG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCAGGAGGACCACATTaGGTGGGGAGGGGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAGGPH*VGRGQE
Trigger: CTCTTGACCCCTCCCCACTCAATGTGGTCCTCCTGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCAGGAGGACCACATTaGGTGGGGAGGGGTCAAGAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAGGPH*VGRGQE
Trigger: CTCTTGACCCCTCCCCACTCAATGTGGTCCTCCTGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGTGGATCGTGGGCATaGGGCAGACCAGCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSGSWA*GRPAAW
Trigger: CCATGCAGCTGGTCTGCCTCATGCCCACGATCCACT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCGTCTGCACAGGCATaGCCAGCTCCAGCTTCAACC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFASAQA*PAPAST
Trigger: GGTTGAAGCTGGAGCTGGGCATGCCTGTGCAGACGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCGTCTGCACAGGCATaGCCAGCTCCAGCTTCAACC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFASAQA*PAPAST
Trigger: GGTTGAAGCTGGAGCTGGGCATGCCTGTGCAGACGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGGTGTCCATGAGCTaGAGGCTGACCCCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRVSMS*RLTPSS
Trigger: GGAGCTAGGGGTCAGCCTGCAGCTCATGGACACCCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCACTGGTCTCCAGTTaGTCGGTCACCTCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSLVSS*SVTSVA
Trigger: GGCCACCGAGGTGACCGAGCAACTGGAGACCAGTGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGGCGAGCGGCAGACTaGAGTACCGCAGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFWRAAD*STAVRK
Trigger: CTTCCTCACTGCGGTACTGCAGTCTGCCGCTCGCCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATGAGGCAGACCAGCTaGATGGGCTCCGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFMRQTS*MGSAST
Trigger: AGTGGAGGCGGAGCCCATGCAGCTGGTCTGCCTCAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATGAGGCAGACCAGCTaGATGGGCTCCGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFMRQTS*MGSAST
Trigger: AGTGGAGGCGGAGCCCATGCAGCTGGTCTGCCTCAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGAGGCTCGATCTGTaGTGCCTGCCCGGTTGGGAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRRLDL*CLPGWD
Trigger: ATCCCAACCGGGCAGGCAGCACAGATCGAGCCTCCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGCCTCTGTAGCTCCTaGGCCTGCAGTGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSLCSS*ACSGLR
Trigger: CCTCAGTCCACTGCAGGCCCAGGAGCTACAGAGGCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCATCCTGGATCTGCTaGGCCAGCTTCCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPSWIC*ASFLKG
Trigger: GCCCTTCAGGAAGCTGGCCCAGCAGATCCAGGATGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATCCGGTGCTCTCTCTaGGCCTCCTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFIRCSL*ASSNSR
Trigger: CCTGGAGTTCGAGGAGGCCCAGAGAGAGCACCGGAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATCCGGTGCTCTCTCTaGGCCTCCTCGAACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFIRCSL*ASSNSR
Trigger: CCTGGAGTTCGAGGAGGCCCAGAGAGAGCACCGGAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGTCTCCAGGAGTCCTaGGTAGTGGGTGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCLQES*VVGAPE
Trigger: CTCCGGAGCACCCACTACCCAGGACTCCTGGAGACA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTCTCCAGGAGTCCTaGGTAGTGGGTGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCLQES*VVGAPE
Trigger: CTCCGGAGCACCCACTACCCAGGACTCCTGGAGACA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTGGGTTACGGGACTaGCCCAGGATCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSGLRD*PRISSR
Trigger: CCTGCTGGAGATCCTGGGCCAGTCCCGTAACCCAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTGGGTTACGGGACTaGCCCAGGATCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSGLRD*PRISSR
Trigger: CCTGCTGGAGATCCTGGGCCAGTCCCGTAACCCAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCGGGACACAGTGGCTaGAGAGGCCACAGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAGHSG*RGHSQV
Trigger: AACTTGGCTGTGGCCTCTCCAGCCACTGTGTCCCGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACGAGCACTGACCACTaGCTGGAGGGCAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFTSTDH*LEGKDW
Trigger: CCAGTCCTTGCCCTCCAGCCAGTGGTCAGTGCTCGT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGCTCCAGGGGCGGCTaGGACCCAAACATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSSRGG*DPNMSL
Trigger: CAAGGACATGTTTGGGTCCCAGCCGCCCCTGGAGCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGCTCCAGGGGCGGCTaGGACCCAAACATGTCCTTG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSSRGG*DPNMSL
Trigger: CAAGGACATGTTTGGGTCCCAGCCGCCCCTGGAGCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTGAAGCTGGGCCATaGCGGCGTTCATTCGGATCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPEAGP*RRSFGS
Trigger: GGATCCGAATGAACGCCGCCATGGCCCAGCTTCAGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCTGAAGCTGGGCCATaGCGGCGTTCATTCGGATCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPEAGP*RRSFGS
Trigger: GGATCCGAATGAACGCCGCCATGGCCCAGCTTCAGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTGCTCCTCCAGCTCTaGTCGCTCCTTCCGAACCAC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLLLQL*SLLPNH
Trigger: GTGGTTCGGAAGGAGCGACCAGAGCTGGAGGAGCAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTGCTCCTCCAGCTCTaGTCGCTCCTTCCGAACCAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLLLQL*SLLPNH
Trigger: GTGGTTCGGAAGGAGCGACCAGAGCTGGAGGAGCAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGCCACGTCAGCGTTaGGGTGTTGGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRPRQR*GVGQRP
Trigger: AGGCCTTTGGCCAACACCCCAACGCTGACGTGGCCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGGCCACGTCAGCGTTaGGGTGTTGGCCAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRPRQR*GVGQRP
Trigger: AGGCCTTTGGCCAACACCCCAACGCTGACGTGGCCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGAAGTTCTCTGGGGTaGTGGGAACTGGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRSSLG*WELGLV
Trigger: GACAAGCCCCAGTTCCCATCACCCCAGAGAACTTCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGAAGTTCTCTGGGGTaGTGGGAACTGGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRSSLG*WELGLV
Trigger: GACAAGCCCCAGTTCCCATCACCCCAGAGAACTTCG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCACCAGCTGCTTGCTaGTGCTGGACAGGTCCATGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSPAAC*CWTGPC
Trigger: GCATGGACCTGTCCAGCATCAGCAAGCAGCTGGTGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTAGCAAGTTTCGTGTaGTCTGTGGCCCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLASFV*SVAPGH
Trigger: GTGCCCAGGGGCCACAGATCACACGAAACTTGCTAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGAAAGCTCCAGCAGTaGCCACTTCACGTTCAGGCG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGKLQQ*PLHVQA
Trigger: CGCCTGAACGTGAAGTGGTCACTGCTGGAGCTTTCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCACCAGCGAGAACTTaGGGTGAGAGCAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAPART*GESSPA
Trigger: TGCTGGACTGCTCTCACCTCAAGTTCTCGCTGGTGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCACCAGCGAGAACTTaGGGTGAGAGCAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAPART*GESSPA
Trigger: TGCTGGACTGCTCTCACCTCAAGTTCTCGCTGGTGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCGGCTGCTCGATCTTaGAGATGCCCAGATTGGAGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPAARS*RCPDWS
Trigger: GCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGATTCCGCAGGTCTaGGATGAGGGGCATGGTCCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFWIPQV*DEGHGP
Trigger: AGGACCATGCCCCTCATCTCAGACCTGCGGAATCCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCTGGACTTCCTCTTTaGCCTGGTCCCAGTGCCTCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAGLPL*PGPSAS
Trigger: AGAGGCACTGGGACCAGGTCAAAGAGGAAGTCCAGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCCGCACGCGCTCGATaGGGTATGCAAAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSARAR*GMQRGC
Trigger: ACAGCCTCTTTGCATACCTCATCGAGCGCGTGCGGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAACCCTGGTGGGTGTaGTCTGGGGTTGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQPWWV*SGVAGK
Trigger: TTTCCCTGCAACCCCAGATCACACCCACCAGGGTTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACTGCAGTACCGCAGTaGGGAAGCCAGTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTAVPQ*GSQWGK
Trigger: CTTTCCCCACTGGCTTCCTCACTGCGGTACTGCAGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCATGGAAGGGGACCTTaGTTGCCGTCTTCCCAACGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFHGRGP*LPSSQR
Trigger: CCGTTGGGAAGACGGCAAGCAAGGTCCCCTTCCATG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCATGGAAGGGGACCTTaGTTGCCGTCTTCCCAACGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHGRGP*LPSSQR
Trigger: CCGTTGGGAAGACGGCAAGCAAGGTCCCCTTCCATG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCACCTTGCTGGCATaGATGCGGCACTCGGTGATG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCTLLA*MRHSVM
Trigger: CATCACCGAGTGCCGCATGCATGCCAGCAAGGTGCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTGATCTCCCACACTTaGTGGAGGGCATCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVISHT*WRASSS
Trigger: GGAGCTCGATGCCCTCCAGCAAGTGTGGGAGATCAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTGATCTCCCACACTTaGTGGAGGGCATCGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVISHT*WRASSS
Trigger: GGAGCTCGATGCCCTCCAGCAAGTGTGGGAGATCAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTCTTTCCAGTACCTaGTGGGCCTTTGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCLSST*WAFGGA
Trigger: GGCTCCCCCAAAGGCCCAGCAGGTACTGGAAAGACA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGGATGGACAGGATCTaGTGGGCCACCACGGACAAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRMDRI*WATTDN
Trigger: GTTGTCCGTGGTGGCCCAGCAGATCCTGTCCATCCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTCTGGAAGCTCTGTaGGGCCGGCATAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSLEAL*GRHSQD
Trigger: ATCCTGGCTATGCCGGCCGCACAGAGCTTCCAGAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTCTGGAAGCTCTGTaGGGCCGGCATAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSLEAL*GRHSQD
Trigger: ATCCTGGCTATGCCGGCCGCACAGAGCTTCCAGAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTAGGCGACGCTTCTTaGCAGCATAGCGCAACAGGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVGDAS*QHSATG
Trigger: CCCTGTTGCGCTATGCTGGCAAGAAGCGTCGCCTAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTGACGGCCTTCTGCTaGTCATCTGCTTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVTAFC*SSASRF
Trigger: GAAGCGGGAAGCAGATGAGCAGCAGAAGGCCGTCAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTGTCGCTTTGCTTCTaGCCACGTGGGCTCATTGCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLSLCF*PRGLIA
Trigger: GGCAATGAGCCCACGTGGGCAGAAGCAAAGCGACAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTGTCGCTTTGCTTCTaGCCACGTGGGCTCATTGCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLSLCF*PRGLIA
Trigger: GGCAATGAGCCCACGTGGGCAGAAGCAAAGCGACAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCTTCCGAACCACAATaGCCAGCAGCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPSEPQ*PAAGLP
Trigger: TGGAAGCCCAGCTGCTGGGCATTGTGGTTCGGAAGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTTCCGAACCACAATaGCCAGCAGCTGGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPSEPQ*PAAGLP
Trigger: TGGAAGCCCAGCTGCTGGGCATTGTGGTTCGGAAGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTGGTGTACCACAGGTaGCAGTCCCGAGGGTACTGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLVYHR*QSRGYC
Trigger: GCAGTACCCTCGGGACTGGCACCTGTGGTACACCAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTCTCCATGAAGCGCTaGGGTCAATCTCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLSMKR*GQSPAG
Trigger: GCCAGCTGGAGATTGACCCCAGCGCTTCATGGAGAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGCACCGCAGGATCCTaGACAAAGTGCTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGTAGS*TKCSRT
Trigger: GGTTCTGGAGCACTTTGTCCAGGATCCTGCGGTGCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTCCTCGAAGTTCTCTaGGGTGATGGGAACTGGGGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLLEVL*GDGNWG
Trigger: GCCCCAGTTCCCATCACCCCAGAGAACTTCGAGGAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTCGAGAGCCATCCTaGATCTGCTGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCREPS*ICWASF
Trigger: GAAGCTGGCCCAGCAGATCCAGGATGGCTCTCGACA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGTCGAGAGCCATCCTaGATCTGCTGGGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCREPS*ICWASF
Trigger: GAAGCTGGCCCAGCAGATCCAGGATGGCTCTCGACA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTGATCTGTGGCCCCTaGGCACCGAAGAAGCATGGA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVICGP*APKKHG
Trigger: TCCATGCTTCTTCGGTGCCCAGGGGCCACAGATCAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGTTCCGACATCTCCTaGGCCTTCCAGCCGATGGTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSSDIS*AFQPMV
Trigger: GACCATCGGCTGGAAGGCCCAGGAGATGTCGGAACT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGTTCCGACATCTCCTaGGCCTTCCAGCCGATGGTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSSDIS*AFQPMV
Trigger: GACCATCGGCTGGAAGGCCCAGGAGATGTCGGAACT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGATGTCGGGGAGGTaGCGGAAGACAGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRMSGR*RKTEMV
Trigger: CACCATCTCTGTCTTCCGCCACCTCCCCGACATCCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCATGGCCATCAGCATaGCGCGCATCTGTGCGATCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAWPSA*RASVRS
Trigger: AGATCGCACAGATGCGCGCCATGCTGATGGCCATGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGATCTGGAGGTCCTTaGAGACCGGCTGCTCGATCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGSGGP*RPAARS
Trigger: AGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGATCTGGAGGTCCTTaGAGACCGGCTGCTCGATCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGSGGP*RPAARS
Trigger: AGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTTCTCCAGGATCTaGAGGTCCTTGGAGACCGGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSFSRI*RSLETG
Trigger: GCCGGTCTCCAAGGACCTCCAGATCCTGGAGAAGGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCCGTCTGCAGGGTCTaGAAGCAGCCCATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSVCRV*KQPIFH
Trigger: GTGGAAGATGGGCTGCTTCCAGACCCTGCAGACGGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCGTCTGCAGGGTCTaGAAGCAGCCCATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSVCRV*KQPIFH
Trigger: GTGGAAGATGGGCTGCTTCCAGACCCTGCAGACGGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAGCCATGGACTCCATaGCTTCCGTCTGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFEPWTP*LPSAGS
Trigger: AGACCCTGCAGACGGAAGCCATGGAGTCCATGGCTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTCCCACTTGCTGCTaGAGCCCCCGACCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPPTCC*SPRPFE
Trigger: TTCAAAAGGTCGGGGGCTCCAGCAGCAAGTGGGAGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCAGTGATCACCACCTaGCCAGCCCAGTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAVITT*PAQSFT
Trigger: GGTGAAAGACTGGGCTGGCCAGGTGGTGATCACTGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGTAGTGGTCCTGTCTaGAGAGCTGCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRSGPV*RAAAQP
Trigger: TGGCTGTGCAGCAGCTCTCCAGACAGGACCACTACG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCGGGAGCTCGATGTTaGGGAAGAGGTCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPGARC*GRGPAQ
Trigger: TTGTGCAGGACCTCTTCCCCAACATCGAGCTCCCGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCGGGAGCTCGATGTTaGGGAAGAGGTCCTGCACAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPGARC*GRGPAQ
Trigger: TTGTGCAGGACCTCTTCCCCAACATCGAGCTCCCGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCACTGACCACTGGCTaGAGGGCAAGGACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFALTTG*RARTGE
Trigger: TTCTCCAGTCCTTGCCCTCCAGCCAGTGGTCAGTGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCACTGACCACTGGCTaGAGGGCAAGGACTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFALTTG*RARTGE
Trigger: TTCTCCAGTCCTTGCCCTCCAGCCAGTGGTCAGTGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCGACTCTGCAGCCTTaGGGAGATAACAGTCCGTCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFATLQP*GDNSPS
Trigger: GGACGGACTGTTATCTCCCCAAGGCTGCAGAGTCGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGAAGCTTATTGGCTTaGTCCAGCAGCTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRSLLA*SSSSCR
Trigger: GCGGCAGGAGCTGCTGGACCAAGCCAATAAGCTTCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGAAGCTTATTGGCTTaGTCCAGCAGCTCCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRSLLA*SSSSCR
Trigger: GCGGCAGGAGCTGCTGGACCAAGCCAATAAGCTTCG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTCTAGATCCTTCTaGGCATTGTCGGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSSRSF*ALSASA
Trigger: GGCGCTGGCCGACAATGCCCAGAAGGATCTAGAGGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCCTCTAGATCCTTCTaGGCATTGTCGGCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSSRSF*ALSASA
Trigger: GGCGCTGGCCGACAATGCCCAGAAGGATCTAGAGGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCAATGATATCAGGCTaGAAGTCGGGCTGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPMISG*KSGWAQ
Trigger: CTGCGCCCAGCCCGACTTCCAGCCTGATATCATTGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCGTCCAGGGAGAACTaGTACATGGGGTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFASREN*YMGSMR
Trigger: CCGCATTGACCCCATGTACCAGTTCTCCCTGGACGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCGTCCAGGGAGAACTaGTACATGGGGTCAATGCGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFASREN*YMGSMR
Trigger: CCGCATTGACCCCATGTACCAGTTCTCCCTGGACGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACTCACCTGGCAGCATaGCCTTCTCCGGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFTHLAA*PSPGKS
Trigger: ACTCTTCCCCGGAGAAGGCCATGCTGCCAGGTGAGT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATTCTCCCACTCACCTaGCAGCATGGCCTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFILPLT*QHGLLR
Trigger: CCGGAGAAGGCCATGCTGCCAGGTGAGTGGGAGAAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGAGATTGGGAAGTCTaGGTGGGGGCTAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGDWEV*VGARAE
Trigger: CTCAGCTCTAGCCCCCACCCAGACTTCCCAATCTCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGAGATTGGGAAGTCTaGGTGGGGGCTAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGDWEV*VGARAE
Trigger: CTCAGCTCTAGCCCCCACCCAGACTTCCCAATCTCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTGCAGGATGGAGATTaGGAAGTCTGGGTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLQDGD*EVWVGA
Trigger: AGCCCCCACCCAGACTTCCCAATCTCCATCCTGCAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTGGTGGGTGTGATCTaGGGTTGCAGGGAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLVGVI*GCRESR
Trigger: CCTGCTTTCCCTGCAACCCCAGATCACACCCACCAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTCTTCTCGGCTCTaGCCACCAACCCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFFSSRL*PPTLVG
Trigger: ACCCACCAGGGTTGGTGGCCAGAGCCGAGAAGAGAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAGGACCACATTGAGTaGGGAGGGGTCAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFEDHIE*GGVKSQ
Trigger: CTGGCTCTTGACCCCTCCCCACTCAATGTGGTCCTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTGCTGGACGGAAGTaGATCGTGGGCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSAGRK*IVGMRQ
Trigger: CTGCCTCATGCCCACGATCCACTTCCGTCCAGCAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTGCTGGACGGAAGTaGATCGTGGGCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSAGRK*IVGMRQ
Trigger: CTGCCTCATGCCCACGATCCACTTCCGTCCAGCAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTTTCGGCTCTCTGCTaGACGGAAGTGGATCGTGGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLSALC*TEVDRG
Trigger: CCCACGATCCACTTCCGTCCAGCAGAGAGCCGAAAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTTGTAAGACGTCTGTaGAACAGGGGCTGGGGATGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVVRRL*NRGWGC
Trigger: GCATCCCCAGCCCCTGTTTCACAGACGTCTTACAAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGCGAGAACTTGAGGTaGGAGCAGTCCAGCATCACG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSENLR*EQSSIT
Trigger: CGTGATGCTGGACTGCTCTCACCTCAAGTTCTCGCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTTGACAGGGCCACCTaGTTATCTTCCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVDRAT*LSSSAW
Trigger: CCAGGCACTGGAAGATAATCAGGTGGCCCTGTCAAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTTGACAGGGCCACCTaGTTATCTTCCAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVDRAT*LSSSAW
Trigger: CCAGGCACTGGAAGATAATCAGGTGGCCCTGTCAAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCTGTCCACTGGATCTaGCTAGCAGTGATCACCACC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAVHWI*LAVITT
Trigger: GGTGGTGATCACTGCTAGTCAGATCCAGTGGACAGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCTGTCCACTGGATCTaGCTAGCAGTGATCACCACC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAVHWI*LAVITT
Trigger: GGTGGTGATCACTGCTAGTCAGATCCAGTGGACAGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGCACGTCGCGGGCGTaGATTTCTATCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSTSRA*ISIVTR
Trigger: TCTGGTGACGATAGAAATTCACGCCCGCGACGTGCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGCACGTCGCGGGCGTaGATTTCTATCGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSTSRA*ISIVTR
Trigger: TCTGGTGACGATAGAAATTCACGCCCGCGACGTGCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCTTGCCATAGTCAATaGCCGGGAGCTCGATGTTGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFACHSQ*PGARCW
Trigger: CCAACATCGAGCTCCCGGTCATTGACTATGGCAAGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCTTACAGAGGGAGATaGTCCCACTGTACTCGGGGA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAYRGR*SHCTRG
Trigger: TCCCCGAGTACAGTGGGATCATCTCCCTCTGTAAGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTGTGCGGACATGTTaGCGACGAGCACTGACCACT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSVRTC*RRALTT
Trigger: AGTGGTCAGTGCTCGTCGTCAACATGTCCGCACAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTCTCGGGGCCACTCTaGGAACCAGTTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLSGPL*EPVDGC
Trigger: ACAACCATCAACTGGTTCTCAGAGTGGCCCCGAGAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGGAGACTCTGCCAATaGTATCAGGCTGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGRLCQ*YQAGSR
Trigger: CCGACTTCCAGCCTGATATCATTGGCAGAGTCTCCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGAGACTCTGCCAATaGTATCAGGCTGGAAGTCGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGRLCQ*YQAGSR
Trigger: CCGACTTCCAGCCTGATATCATTGGCAGAGTCTCCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCACAGGCGGTTCAATaGATCGAGAGCCAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAQAVQ*IESQGW
Trigger: CCAACCTTGGCTCTCGATTCATTGAACCGCCTGTGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCACAGGCGGTTCAATaGATCGAGAGCCAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAQAVQ*IESQGW
Trigger: CCAACCTTGGCTCTCGATTCATTGAACCGCCTGTGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTCTTCCAGGCTTGTTaGCATGACGATGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLFQAC*HDDEAL
Trigger: CAGGGCCTCATCGTCATGTCAACAAGCCTGGAAGAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTCTTCCAGGCTTGTTaGCATGACGATGAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLFQAC*HDDEAL
Trigger: CAGGGCCTCATCGTCATGTCAACAAGCCTGGAAGAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGCACCGTCCCATACTaGACAGTCTCCTCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRTVPY*TVSSKF
Trigger: GAACTTCGAGGAGACTGTGCAGTATGGGACGGTGCG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGCACCGTCCCATACTaGACAGTCTCCTCGAAGTTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRTVPY*TVSSKF
Trigger: GAACTTCGAGGAGACTGTGCAGTATGGGACGGTGCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCCTTCTTCACCAGCTaGTTGCTGATGCTGGACAGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPFFTS*LLMLDR
Trigger: CCTGTCCAGCATCAGCAAGCAGCTGGTGAAGAAGGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTTTGAACAGGGCCTaGTCGTCTGGGGACAGCATG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSLNRA*SSGDSM
Trigger: CATGCTGTCCCCAGACGAGCAGGCCCTGTTCAAAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTTTGAACAGGGCCTaGTCGTCTGGGGACAGCATG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSLNRA*SSGDSM
Trigger: CATGCTGTCCCCAGACGAGCAGGCCCTGTTCAAAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCACTCGTTGCAGTGCTaGACCAGCGAGAACTTGAGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHSLQC*TSENLR
Trigger: CCTCAAGTTCTCGCTGGTGCAGCACTGCAACGAGTG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTTCTGCCACTCGTTaGAGTGCTGCACCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCSATR*SAAPAR
Trigger: TCTCGCTGGTGCAGCACTGCAACGAGTGGCAGAACA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGTTCTGCCACTCGTTaGAGTGCTGCACCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCSATR*SAAPAR
Trigger: TCTCGCTGGTGCAGCACTGCAACGAGTGGCAGAACA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTTGGAGACCGGCTaGTCGATCTTGAAGATGCCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSLETG*SILKMP
Trigger: GGGCATCTTCAAGATCGAGCAGCCGGTCTCCAAGGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTCCTGGGTAGTGGGTaGTCCGGAGAGCGTTATTGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVLGSG*SGERYC
Trigger: ACAATAACGCTCTCCGGAGCACCCACTACCCAGGAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTCCTGGGTAGTGGGTaGTCCGGAGAGCGTTATTGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVLGSG*SGERYC
Trigger: ACAATAACGCTCTCCGGAGCACCCACTACCCAGGAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTTGGCCAGGATCTTaGAGTTGCCAAAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSWPGS*SCQSPP
Trigger: GGGAGGGCTTTGGCAACTGCAAGATCCTGGCCAAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGTGTGATCTGGGGTTaGAGGGAAAGCAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGVIWG*RESRVS
Trigger: TGAGACCCTGCTTTCCCTGCAACCCCAGATCACACC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGTGTGATCTGGGGTTaGAGGGAAAGCAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGVIWG*RESRVS
Trigger: TGAGACCCTGCTTTCCCTGCAACCCCAGATCACACC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGGCTCGATCTGTGCTaGCTGCCCGGTTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRLDLC*LPGWDN
Trigger: ATTATCCCAACCGGGCAGGCAGCACAGATCGAGCCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGCTCGATCTGTGCTaGCTGCCCGGTTGGGATAAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRLDLC*LPGWDN
Trigger: ATTATCCCAACCGGGCAGGCAGCACAGATCGAGCCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGGATGCAGCAGAGTTaGTGGAGTGTTAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGMQQS*WSVSLS
Trigger: GGAGAGGCTAACACTCCACCAACTCTGCTGCATCCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGATGCAGCAGAGTTaGTGGAGTGTTAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGMQQS*WSVSLS
Trigger: GGAGAGGCTAACACTCCACCAACTCTGCTGCATCCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTCTCCACAGACTCCTaGGCACTCAGCACTTCCTTG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVSTDS*ALSTSL
Trigger: CAAGGAAGTGCTGAGTGCCCAGGAGTCTGTGGAGAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTTTCGTGTGATCTGTaGCCCCTGGGCACCGAAGAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVSCDL*PLGTEE
Trigger: TTCTTCGGTGCCCAGGGGCCACAGATCACACGAAAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATATGGGGCAGGAAGTaGGCTCCGGAAAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFIWGRK*APERQF
Trigger: GAACTGCCTTTCCGGAGCCCACTTCCTGCCCCATAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATATGGGGCAGGAAGTaGGCTCCGGAAAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFIWGRK*APERQF
Trigger: GAACTGCCTTTCCGGAGCCCACTTCCTGCCCCATAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGGGCCTGCTCGTCTaGGGACAGCATGGCAATAAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQGLLV*GQHGNN
Trigger: ATTATTGCCATGCTGTCCCCAGACGAGCAGGCCCTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCAGGGCCTGCTCGTCTaGGGACAGCATGGCAATAAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFQGLLV*GQHGNN
Trigger: ATTATTGCCATGCTGTCCCCAGACGAGCAGGCCCTG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCTGAAGAGCGGGTTTaGAGTGGTCTTTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPEERV*SGLSIP
Trigger: GGGGATGGAAAGACCACTCCAAACCCGCTCTTCAGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGCTCCTCCAGCGTCTaGGGAGGGTGGCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSSSSV*GGWLIF
Trigger: AAAAATCAGCCACCCTCCCCAGACGCTGGAGGAGCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATCTCCCACACTTGCTaGAGGGCATCGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFISHTC*RASSSF
Trigger: GAAGGAGCTCGATGCCCTCCAGCAAGTGTGGGAGAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATCTCCCACACTTGCTaGAGGGCATCGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFISHTC*RASSSF
Trigger: GAAGGAGCTCGATGCCCTCCAGCAAGTGTGGGAGAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACAGCCCATGAGCCATaGACTCCATGGCTTCCGTCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTAHEP*TPWLPS
Trigger: AGACGGAAGCCATGGAGTCCATGGCTCATGGGCTGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGATCTCCTGCTCGATaGTGTCCCGTAGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGSPAR*CPVACH
Trigger: ATGGCAAGCTACGGGACACCATCGAGCAGGAGATCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGATCTCCTGCTCGATaGTGTCCCGTAGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGSPAR*CPVACH
Trigger: ATGGCAAGCTACGGGACACCATCGAGCAGGAGATCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCCCATTCTCAGGTGTaGCCAGGACTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPHSQV*PGLCRA
Trigger: AGCTCTACACAGTCCTGGCCACACCTGAGAATGGGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGAAGTCCCCAAAGATaGGAGGGCGTTTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGSPQR*EGVCWD
Trigger: GTCCCAACAAACGCCCTCCCATCTTTGGGGACTTCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGAAGTCCCCAAAGATaGGAGGGCGTTTGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGSPQR*EGVCWD
Trigger: GTCCCAACAAACGCCCTCCCATCTTTGGGGACTTCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGGAGAACTGGTACATaGGGTCAATGCGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGRTGT*GQCGPC
Trigger: ACATGGGCCGCATTGACCCCATGTACCAGTTCTCCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGAGAACTGGTACATaGGGTCAATGCGGCCCATGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGRTGT*GQCGPC
Trigger: ACATGGGCCGCATTGACCCCATGTACCAGTTCTCCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTCCGGGGAAGAGTTaGTGTACCACAGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSPGKS*CTTGAS
Trigger: ACTGGCACCTGTGGTACACCAACTCTTCCCCGGAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCAGGCTTGGAGCAGTaGGTAAACTGTGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAGLEQ*VNCASV
Trigger: GACAGAGGCACAGTTTACCCACTGCTCCAAGCCTGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCAGGCTTGGAGCAGTaGGTAAACTGTGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAGLEQ*VNCASV
Trigger: GACAGAGGCACAGTTTACCCACTGCTCCAAGCCTGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAGGGCGGGCTCGACTaGCCCATGTTTCAAACTGTT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFEGGLD*PMFQTV
Trigger: AACAGTTTGAAACATGGGCCAGTCGAGCCCGCCCTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGTCAACATCGTTCGTaGGAGGAAGAAGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGQHRS*EEEGLQ
Trigger: CTGAAGCCCTTCTTCCTCTCACGAACGATGTTGACC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAAAGTCAGGTTGGACTaGGCTTGTCGAGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFKVRLD*ACREPS
Trigger: GGATGGCTCTCGACAAGCTCAGTCCAACCTGACTTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAAAGTCAGGTTGGACTaGGCTTGTCGAGAGCCATCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFKVRLD*ACREPS
Trigger: GGATGGCTCTCGACAAGCTCAGTCCAACCTGACTTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTTTCCATCCCCGTTaGTGGCCTTGGAAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSFHPR*WPWKAP
Trigger: TGGAGCTTTCCAAGGCCATCAACGGGGATGGAAAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACATGTCCCAGGTCTTaGGGTAATTCTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFTCPRS*GNSAAG
Trigger: GCCTGCTGCAGAATTACCTCAAGACCTGGGACATGT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACATGTCCCAGGTCTTaGGGTAATTCTGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTCPRS*GNSAAG
Trigger: GCCTGCTGCAGAATTACCTCAAGACCTGGGACATGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTTCAGCATTGTCCTTaGGGTAGGAGTGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFFQHCP*GRSAGP
Trigger: CGGACCTGCACTCCTACCTCAAGGACAATGCTGAAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGGCATGGTCCTCTTaGACTGCTCTATTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGAWSS*TALFWS
Trigger: GCTCCAAAATAGAGCAGTTCAAGAGGACCATGCCCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGGGCATGGTCCTCTTaGACTGCTCTATTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGAWSS*TALFWS
Trigger: GCTCCAAAATAGAGCAGTTCAAGAGGACCATGCCCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAAGCTCTCTGACTCCTaGTCAAACTCCCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFKLSDS*SNSRWT
Trigger: AGTCCAGCGGGAGTTTGATCAGGAGTCAGAGAGCTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAAGGTGAAGCTCTCTaGCTCCTGATCAAACTCCCG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQGEAL*LLIKLP
Trigger: CGGGAGTTTGATCAGGAGTCAGAGAGCTTCACCTTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTATTCACCGTCACCTaGGAACATTCCCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVFTVT*EHSHCL
Trigger: GAGGCAGTGGGAATGTTCTCAGGTGACGGTGAATAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTATTCACCGTCACCTaGGAACATTCCCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVFTVT*EHSHCL
Trigger: GAGGCAGTGGGAATGTTCTCAGGTGACGGTGAATAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCATCAGGCACTTGGTaGCATCAGCTGTCCACTGGA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSSGTW*HQLSTG
Trigger: TCCAGTGGACAGCTGATGTCACCAAGTGCCTGATGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTGCTGCACAGCCAGTaGGTACAGTGTGTACACCTT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLLHSQ*VQCVHL
Trigger: AAGGTGTACACACTGTACTCACTGGCTGTGCAGCAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAATGGCAAAGCGAGGTaGACAGGGAACCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFNGKAR*TGNLKL
Trigger: GAGCTTCAGGTTCCCTGTTCACCTCGCTTTGCCATT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAATGGCAAAGCGAGGTaGACAGGGAACCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFNGKAR*TGNLKL
Trigger: GAGCTTCAGGTTCCCTGTTCACCTCGCTTTGCCATT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGCCAAGTCAATGTTaGTCTCTGTGGTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGPSQC*SLWSHW
Trigger: CCAGTGAGACCACAGAGATCAACATTGACTTGGCCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTACTCATCCATGTTaGGCTTGCCGGACGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCTHPC*ACRTSP
Trigger: TGGAGACGTCCGGCAAGCTCAACATGGATGAGTACA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAACACCCAGTGCCCTTaGTTCACACCCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFNTQCP*FTPSRR
Trigger: TCTTCGAGAGGGTGTGAATCAAGGGCACTGGGTGTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGCCAGTGGGGAAAGTaGAGCCAGACAGCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSQWGK*SQTAKR
Trigger: TCTTTTGGCTGTCTGGCTTCACTTTCCCCACTGGCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGAGATCGATGCCTATaGCAAAGGAGGCTCGATCTG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGDRCL*QRRLDL
Trigger: CAGATCGAGCCTCCTTTGTCATAGGCATCGATCTCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGAGATCGATGCCTATaGCAAAGGAGGCTCGATCTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGDRCL*QRRLDL
Trigger: CAGATCGAGCCTCCTTTGTCATAGGCATCGATCTCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCATCTGTACGGCCTCTaGAGGGATGTACAGTACCGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHLYGL*RDVQYR
Trigger: ACGGTACTGTACATCCCTGCAGAGGCCGTACAGATG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTTTTGAGGTGTGGCTaGACAGCCTCTGGGTTACGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFFLRCG*TASGLR
Trigger: CCGTAACCCAGAGGCTGTGCAGCCACACCTCAAAAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCAGGATCTTGCAGTTaGCAAAGCCCTCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPGSCS*QSPPQR
Trigger: TCTTTGGGGAGGGCTTTGGCAACTGCAAGATCCTGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCAGGATCTTGCAGTTaGCAAAGCCCTCCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPGSCS*QSPPQR
Trigger: TCTTTGGGGAGGGCTTTGGCAACTGCAAGATCCTGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTGGAGTTCTACCCCTaGCTGTCGATACAAGCGCTT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLEFYP*LSIQAL
Trigger: AAGCGCTTGTATCGACAGGCAGGGGTAGAACTCCAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTGCTTCCCGCTTCTaGTGCACAATGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSASRF*CTMMTR
Trigger: CCTGGTCATCATTGTGCAGCAGAAGCGGGAAGCAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTGCTTCCCGCTTCTaGTGCACAATGATGACCAGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSASRF*CTMMTR
Trigger: CCTGGTCATCATTGTGCAGCAGAAGCGGGAAGCAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGACACCAACATTCCTaGTCGCTCCAGCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRHQHS*SLQLQL
Trigger: GAGCTGAAGCTGGAGCGAGCAGGAATGTTGGTGTCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTCCAGCTTATTGCTaGGGTGGCTCTTGTCAATGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPPAYC*GGSCQC
Trigger: GCATTGACAAGAGCCACCGCAGCAATAAGCTGGAGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCTCCAGCTTATTGCTaGGGTGGCTCTTGTCAATGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPPAYC*GGSCQC
Trigger: GCATTGACAAGAGCCACCGCAGCAATAAGCTGGAGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGTCCTCCAGCTTATTaGTGCGGTGGCTCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGPPAY*CGGSCQ
Trigger: TTGACAAGAGCCACCGCAGCAATAAGCTGGAGGACC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGTCCTCCAGCTTATTaGTGCGGTGGCTCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGPPAY*CGGSCQ
Trigger: TTGACAAGAGCCACCGCAGCAATAAGCTGGAGGACC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATCCCAGTAGGCATCTaGCAGCCAACTGGTACATGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFIPVGI*QPTGTW
Trigger: CCATGTACCAGTTGGCTGGCAGATGCCTACTGGGAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATCCCAGTAGGCATCTaGCAGCCAACTGGTACATGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFIPVGI*QPTGTW
Trigger: CCATGTACCAGTTGGCTGGCAGATGCCTACTGGGAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCAGTCCCGAGGGTACTaGTCAAAGGAGTTCATGAGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFQSRGY*SKEFMS
Trigger: GCTCATGAACTCCTTTGAGCAGTACCCTCGGGACTG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCCTCCACCTGCAGTTaGTCCACCAACTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSSTCS*STNLSR
Trigger: TCTGGACAAGTTGGTGGAGCAACTGCAGGTGGAGGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATCTGCCTCGTCCAGTaGATCATGGAGGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFICLVQ*IMEVSS
Trigger: GCTAGAGACCTCCATGATCCACTGGACGAGGCAGAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATCTGCCTCGTCCAGTaGATCATGGAGGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFICLVQ*IMEVSS
Trigger: GCTAGAGACCTCCATGATCCACTGGACGAGGCAGAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATGCCACTGCTGATCTaGGCCTGGATCTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFMPLLI*AWIFLM
Trigger: CATCAGGAAGATCCAGGCCCAGATCAGCAGTGGCAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTATGGCCAGCTCTTTaGTCGCAGAGGCTGAGATCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLWPAL*SQRLRS
Trigger: AGATCTCAGCCTCTGCGACCAAAGAGCTGGCCATAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCACTTTTTGAGGTGTaGCTGCACAGCCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFALFEV*LHSLWV
Trigger: AACCCAGAGGCTGTGCAGCCACACCTCAAAAAGTGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCACTTTTTGAGGTGTaGCTGCACAGCCTCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFALFEV*LHSLWV
Trigger: AACCCAGAGGCTGTGCAGCCACACCTCAAAAAGTGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAATCAGGCACCACCATaGCAATTGGGCGGAACATGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFNQAPP*QLGGTW
Trigger: CCATGTTCCGCCCAATTGCCATGGTGGTGCCTGATT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCCACCCACAATCATaGTGGAGTGGCGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCHPQS*WSGESS
Trigger: AGAACTCTCGCCACTCCACCATGATTGTGGGTGGCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGACAGGATTCTGGTTaGCCACCAGGGTGCTCACTA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRQDSG*PPGCSL
Trigger: TAGTGAGCACCCTGGTGGCCAACCAGAATCCTGTCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGACAGGATTCTGGTTaGCCACCAGGGTGCTCACTA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRQDSG*PPGCSL
Trigger: TAGTGAGCACCCTGGTGGCCAACCAGAATCCTGTCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGTAAGACAGGATTCTaGTTGGCCACCAGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSKTGF*LATRVL
Trigger: GAGCACCCTGGTGGCCAACCAGAATCCTGTCTTACT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCTTTTGCCCCCGAATaGCACATACACACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAFAPE*HIHTLG
Trigger: ACCAAGGGTGTGTATGTGCCATTCGGGGGCAAAAGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGTCTTCATAGACCTTaGGCTCCTTCAGGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGLHRP*APSGSP
Trigger: GGGACTTCCTGAAGGAGCCCAAGGTCTATGAAGACC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGTTCTGCCCGGGCCTaGTCTATGATATGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCSARA*SMIWFW
Trigger: CCAGAACCATATCATAGACCAGGCCCGGGCAGAACA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTTCTGCCCGGGCCTaGTCTATGATATGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCSARA*SMIWFW
Trigger: CCAGAACCATATCATAGACCAGGCCCGGGCAGAACA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGGCCACTTTCCTGTaGATATTCTCCTGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFWATFL*IFSCVP
Trigger: GGGGACACAGGAGAATATCCACAGGAAAGTGGCCCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGGGCCACTTTCCTGTaGATATTCTCCTGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFWATFL*IFSCVP
Trigger: GGGGACACAGGAGAATATCCACAGGAAAGTGGCCCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGCTTCTGCCCACGTaGGCTCATTGCCTCGAAGAA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLLLPT*AHCLEE
Trigger: TTCTTCGAGGCAATGAGCCCACGTGGGCAGAAGCAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTGCTTCTGCCCACGTaGGCTCATTGCCTCGAAGAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLLLPT*AHCLEE
Trigger: TTCTTCGAGGCAATGAGCCCACGTGGGCAGAAGCAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCAGTCCCGGACTTTaGTGGGATTGGTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSSPGL*WDWSGS
Trigger: ACTTCCTGACCAATCCCACCAAAGTCCGGGACTGGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGATTTGTTGAGCACTaGGTTGAGCGTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRFVEH*VERGVQ
Trigger: CTGGACCCCACGCTCAACCCAGTGCTCAACAAATCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTCTGTGGTCTCACTaGTCTCCAGTTGCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSLWSH*SPVARS
Trigger: TGACCGAGCAACTGGAGACCAGTGAGACCACAGAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAAGACAGAGACAGGTaGCAGTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQDRDR*QFARNT
Trigger: GGTGTTCCTGGCAAACTGCCACCTGTCTCTGTCTTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATGACGATGAGGCCCTaGATGCCCTTCTCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFMTMRP*MPFSKS
Trigger: AGACTTGGAGAAGGGCATCCAGGGCCTCATCGTCAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCCAAACTCCATCCTTaGGTGGATACACCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPKLHP*VDTPGC
Trigger: GCAACCTGGTGTATCCACCCAAGGATGGAGTTTGGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCCAAACTCCATCCTTaGGTGGATACACCAGGTTGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPKLHP*VDTPGC
Trigger: GCAACCTGGTGTATCCACCCAAGGATGGAGTTTGGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGCTGCCTGCCCGGTTaGGATAATAATAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCCLPG*DNNSRD
Trigger: GTCCCTGCTATTATTATCCCAACCGGGCAGGCAGCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCTGCCTGCCCGGTTaGGATAATAATAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCCLPG*DNNSRD
Trigger: GTCCCTGCTATTATTATCCCAACCGGGCAGGCAGCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGGGTGGAGGCCTTaGAGTCGTTCACAATCATCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSGWRP*SRSQSS
Trigger: AGATGATTGTGAACGACTTCAAGGCCTCCACCCTGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCACGAACTGGATGTTaGGGACCGTCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSRTGC*GPSLPS
Trigger: AGAAGGAAGAGACGGTCCTCAACATCCAGTTCGTGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCACGAACTGGATGTTaGGGACCGTCTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSRTGC*GPSLPS
Trigger: AGAAGGAAGAGACGGTCCTCAACATCCAGTTCGTGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCAATCTGCTCCAAGGTaGAGCTCTCTGACTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFQSAPR*SSLTPD
Trigger: ATCAGGAGTCAGAGAGCTTCACCTTGGAGCAGATTG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAATCTGCTCCAAGGTaGAGCTCTCTGACTCCTGAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQSAPR*SSLTPD
Trigger: ATCAGGAGTCAGAGAGCTTCACCTTGGAGCAGATTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGTACTATGTCTAGCTaGGTCGAATCCCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGTMSS*VESQVL
Trigger: CAAGACCTGGGATTCGACTCAGCTAGACATAGTACC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGTACTATGTCTAGCTaGGTCGAATCCCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGTMSS*VESQVL
Trigger: CAAGACCTGGGATTCGACTCAGCTAGACATAGTACC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGATGCCTTCATGGTTaGCAGGGCCACCTGATTATC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRCLHG*QGHLII
Trigger: GATAATCAGGTGGCCCTGTCAACCATGAAGGCATCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGATGCCTTCATGGTTaGCAGGGCCACCTGATTATC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRCLHG*QGHLII
Trigger: GATAATCAGGTGGCCCTGTCAACCATGAAGGCATCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCTTGCCCAGGTCTTTaGCAGTTTCTGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPCPGL*QFLSFQ
Trigger: CTGGAAAGACAGAAACTGTCAAAGACCTGGGCAAGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTTGCCCAGGTCTTTaGCAGTTTCTGTCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPCPGL*QFLSFQ
Trigger: CTGGAAAGACAGAAACTGTCAAAGACCTGGGCAAGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACTCTGTGCCAGTCCTaGGTACATTCTTCCCATGGA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTLCQS*VHSSHG
Trigger: TCCATGGGAAGAATGTACTCAGGACTGGCACAGAGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTGGAGCTTCTGGTTaGTCATGGTGCCAAATATGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPGASG*SWCQIC
Trigger: GCATATTTGGCACCATGATCAACCAGAAGCTCCAGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGATGTCCCGGAGGTTaGAGAGGTAATGGATCTTCG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRCPGG*RGNGSS
Trigger: CGAAGATCCATTACCTCTTCAACCTCCGGGACATCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGAATACTGAGCCACTaGCCAGTGCATGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGILSH*PVHGDK
Trigger: TTTGTCACCATGCACTGGTCAGTGGCTCAGTATTCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGAATACTGAGCCACTaGCCAGTGCATGGTGACAAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGILSH*PVHGDK
Trigger: TTTGTCACCATGCACTGGTCAGTGGCTCAGTATTCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATCTTCTGGGAATACTaGGCCACTGACCAGTGCATG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFIFWEY*ATDQCM
Trigger: CATGCACTGGTCAGTGGCTCAGTATTCCCAGAAGAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGAGAGCTTGGTGGTaGGGTAGAAACGGAAATTGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFWRAWW*GRNGNW
Trigger: CCAATTTCCGTTTCTACCTCACCACCAAGCTCTCCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGCACATGTGAAAACTaGACAGAAGCTTGTGGCGCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRTCEN*TEACGA
Trigger: AGCGCCACAAGCTTCTGTTCAGTTTTCACATGTGCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCTCAAAGGAGTTCATaGGCCCATGGAAGTTGGTCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAQRSS*AHGSWS
Trigger: TGACCAACTTCCATGGGCTCATGAACTCCTTTGAGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTAAAGGGTGTGATCTaGAGGCCCATTTCTCGGATC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVKGVI*RPISRI
Trigger: GATCCGAGAAATGGGCCTGCAGATCACACCCTTTAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTCTGGTATCTGTTCTaGCCGGGCCTGGTCTATGAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFFWYLF*PGLVYD
Trigger: ATCATAGACCAGGCCCGGGCAGAACAGATACCAGAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCTTCCCGCTTCTGCTaGACAATGATGACCAGGTAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFASRFC*TMMTRY
Trigger: ATACCTGGTCATCATTGTGCAGCAGAAGCGGGAAGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGTCCAGATACTCCTaGACATTCTGGAGTAGCACT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGSRYS*TFWSST
Trigger: AGTGCTACTCCAGAATGTGCAGGAGTATCTGGACCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGGTCCAGATACTCCTaGACATTCTGGAGTAGCACT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGSRYS*TFWSST
Trigger: AGTGCTACTCCAGAATGTGCAGGAGTATCTGGACCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGGTATTCACCAGCTaGACGTCATCAAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRVFTS*TSSSRE
Trigger: CTCTCTGCTTGATGACGTGCAGCTGGTGAATACCCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCATTCAGGTACTCGATaGGGTCCTCCAGCTTATTGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFHSGTR*GPPAYC
Trigger: GCAATAAGCTGGAGGACCGCATCGAGTACCTGAATG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCATTCAGGTACTCGATaGGGTCCTCCAGCTTATTGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHSGTR*GPPAYC
Trigger: GCAATAAGCTGGAGGACCGCATCGAGTACCTGAATG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACGATCAGCATCCGCTaGATCTCATTGCACGCATTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTISIR*ISLHAF
Trigger: GAATGCGTGCAATGAGATGCAGCGGATGCTGATCGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACGATCAGCATCCGCTaGATCTCATTGCACGCATTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFTISIR*ISLHAF
Trigger: GAATGCGTGCAATGAGATGCAGCGGATGCTGATCGT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATCTTGATGCTGGCCTaGAGGATGGAGATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFILMLA*RMEIGK
Trigger: CTTCCCAATCTCCATCCTGCAGGCCAGCATCAAGAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATCTCGGGGATCTTCTaGTTCACATCAGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFISGIF*FTSAAN
Trigger: GTTGGCTGCTGATGTGAAGCAGAAGATCCCCGAGAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATCTCGGGGATCTTCTaGTTCACATCAGCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFISGIF*FTSAAN
Trigger: GTTGGCTGCTGATGTGAAGCAGAAGATCCCCGAGAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTGGATACACCAGGTTaGTGTCGTCCACAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVDTPG*CRPQWK
Trigger: TTTCCACTGTGGACGACAGCAACCTGGTGTATCCAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTCTTTCGGCTCTCTaGTGGACGGAAGTGGATCGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFFLSAL*WTEVDR
Trigger: ACGATCCACTTCCGTCCAGCAGAGAGCCGAAAGAAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATGCAGCAGAGTTGGTaGAGTGTTAGCCTCTCCATG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFMQQSW*SVSLSM
Trigger: CATGGAGAGGCTAACACTCCACCAACTCTGCTGCAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGGGGTGATGGGAACTaGGGCTTGTCGAATGAAGTA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFWGDGN*GLSNEV
Trigger: TACTTCATTCGACAAGCCCCAGTTCCCATCACCCCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGGGTGATGGGAACTaGGGCTTGTCGAATGAAGTA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFWGDGN*GLSNEV
Trigger: TACTTCATTCGACAAGCCCCAGTTCCCATCACCCCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGGGTTCCCTCAGGATaGACAAGAAAGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRVPSG*TRKSGW
Trigger: CCAACCTGACTTTCTTGTCCATCCTGAGGGAACCCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGGTTCCCTCAGGATaGACAAGAAAGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRVPSG*TRKSGW
Trigger: CCAACCTGACTTTCTTGTCCATCCTGAGGGAACCCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATGGTGGCAAAGAGGTaGCTGCCTATGTCATTGACC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFMVAKR*LPMSLT
Trigger: GGTCAATGACATAGGCAGCCACCTCTTTGCCACCAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGACAGTGTCCGGAACTaGCACCTCATACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFDSVRN*HLILLQ
Trigger: TTGGAGAAGTATGAGGTGCCAGTTCCGGACACTGTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAAGTCATCGGCGGCATaGATAAGGCCTGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFKSSAA*IRPVLN
Trigger: GTTCAAGACAGGCCTTATCCATGCCGCCGATGACTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTAATCCCACTTCTATaGCCAGCTCTTTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVIPLL*PALWSQ
Trigger: CTGCGACCAAAGAGCTGGCCATAGAAGTGGGATTAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTAATCCCACTTCTATaGCCAGCTCTTTGGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVIPLL*PALWSQ
Trigger: CTGCGACCAAAGAGCTGGCCATAGAAGTGGGATTAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATCGAGATGCCTTCATaGTTGACAGGGCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFIEMPS*LTGPPD
Trigger: ATCAGGTGGCCCTGTCAACCATGAAGGCATCTCGAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATCGAGATGCCTTCATaGTTGACAGGGCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFIEMPS*LTGPPD
Trigger: ATCAGGTGGCCCTGTCAACCATGAAGGCATCTCGAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAAGCGGGGGAATATGTaGCGCTTGGTCTCTAAGTAC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFKRGNM*RLVSKY
Trigger: GTACTTAGAGACCAAGCGCCACATATTCCCCCGCTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAAGCGGGGGAATATGTaGCGCTTGGTCTCTAAGTAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFKRGNM*RLVSKY
Trigger: GTACTTAGAGACCAAGCGCCACATATTCCCCCGCTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGTCTGATCGCTCTTTaGCTGTCATCAGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCLIAL*LSSGTW
Trigger: CCAAGTGCCTGATGACAGCCAAAGAGCGATCAGACA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTCTGATCGCTCTTTaGCTGTCATCAGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCLIAL*LSSGTW
Trigger: CCAAGTGCCTGATGACAGCCAAAGAGCGATCAGACA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTGTGTACACCTTCTTaGCCAGGATCTTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVCTPS*PGSCSC
Trigger: GCAACTGCAAGATCCTGGCCAAGAAGGTGTACACAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTGTGTACACCTTCTTaGCCAGGATCTTGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVCTPS*PGSCSC
Trigger: GCAACTGCAAGATCCTGGCCAAGAAGGTGTACACAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCACTGACGTCAGCTTaGCGATGTTCATGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPLTSA*RCSCLS
Trigger: TGAGAGACATGAACATCGCCAAGCTGACGTCAGTGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCACTGACGTCAGCTTaGCGATGTTCATGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPLTSA*RCSCLS
Trigger: TGAGAGACATGAACATCGCCAAGCTGACGTCAGTGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGATAACGCCAGCTCTTaGGGAGCTTCTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFDNASS*GASPQM
Trigger: CATTTGAGGAGAAGCTCCCCAAGAGCTGGCGTTATC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAACACTCTGGGCTATaGAGGTCTTTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFEHSGL*RSFQFP
Trigger: TGGGAACTGGAAAGACCTCCATAGCCCAGAGTGTTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGACTGGAGAACACTCTaGGCTATGGAGGTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFDWRTL*AMEVFP
Trigger: TGGAAAGACCTCCATAGCCCAGAGTGTTCTCCAGTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGGAGGGCGTTTGTTaGGACAGAGATGATGAAACG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFWEGVC*DRDDET
Trigger: CGTTTCATCATCTCTGTCCCAACAAACGCCCTCCCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGGGAGGGCGTTTGTTaGGACAGAGATGATGAAACG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFWEGVC*DRDDET
Trigger: CGTTTCATCATCTCTGTCCCAACAAACGCCCTCCCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTTATAATCGCAGATaGAAGACGCCAAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCYNRR*KTPSGP
Trigger: TGGCCCGCTTGGCGTCTTCCATCTGCGATTATAACA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGTTCGAAGCTTATTaGCTTGGTCCAGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQFEAY*LGPAAP
Trigger: AGGAGCTGCTGGACCAAGCCAATAAGCTTCGAACTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGCTTATTGCTGCGGTaGCTCTTGTCAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSLLLR*LLSMLR
Trigger: CCTCAGCATTGACAAGAGCCACCGCAGCAATAAGCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTGAACAGAAGCTTGTaGCGCTCAAAAAGGGTTCGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLNRSL*RSKRVR
Trigger: CCGAACCCTTTTTGAGCGCCACAAGCTTCTGTTCAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCATGGATTGTCCATTTaGCCTTCACGATCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHGLSI*PSRSRT
Trigger: GGTCCTGGATCGTGAAGGCCAAATGGACAATCCATG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAACTCCATCCTTGGGTaGATACACCAGGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFNSILG*IHQVAV
Trigger: GACAGCAACCTGGTGTATCCACCCAAGGATGGAGTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGGCTAACTCACTATTaGACAGCATGTAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGLTHY*TACRGR
Trigger: TCGACCTCTACATGCTGTTCAATAGTGAGTTAGCCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGCTAACTCACTATTaGACAGCATGTAGAGGTCGA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGLTHY*TACRGR
Trigger: TCGACCTCTACATGCTGTTCAATAGTGAGTTAGCCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTGTCTTGTCAAAGTTaGCATCCAGCATGCCCACTT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVSCQS*HPACPL
Trigger: AAGTGGGCATGCTGGATGTCAACTTTGACAAGACAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGTAGGAGTTGGTCATaGTGTTCACCACATCTTGGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRRSWS*CSPHLG
Trigger: ACCAAGATGTGGTGAACATCATGACCAACTCCTACG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGCGAGTCGTTTCAATaGTTTCCCAGTTTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSESFQ*FPSFGP
Trigger: AGGACCGAAACTGGGAAATCATTGAAACGACTCGCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATCTTCTCCACGTGCTaGTCCATCCCTAGTTTCACA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFIFSTC*SIPSFT
Trigger: TGTGAAACTAGGGATGGATCAGCACGTGGAGAAGAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTTTCCAGTTGTTGTTaGCCTGGTCAAATAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLSSCC*PGQIGL
Trigger: CAGCCCTATTTGACCAGGTCAACAACAACTGGAAAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGTCAAGTTCCCCCTaGTGGCCTCTGAATACTTAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFWSSSP*WPLNTY
Trigger: ATAAGTATTCAGAGGCCATCAGGGGGAACTTGACCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTCTTTTCCAGCCATaGCTGAACATAAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPLFQP*LNIRLP
Trigger: TGGAAGCCTTATGTTCAGTCATGGCTGGAAAAGAGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGACCAGATCATGCTaGACACAAAGGTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQTRSC*TQRSSP
Trigger: TGGAGATGACCTTTGTGTTCAGCATGATCTGGTCTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCAGAGTGGAGGGACATaGGCATCAAATATGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFQSGGT*ASNMQL
Trigger: CAACTGCATATTTGATGCTCATGTCCCTCCACTCTG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGAGTGGAGGGACATaGGCATCAAATATGCAGTTG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQSGGT*ASNMQL
Trigger: CAACTGCATATTTGATGCTCATGTCCCTCCACTCTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCCCTCTTAATCCAGTaGTCAGATGTCATGGATCCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPLLIQ*SDVMDP
Trigger: TGGATCCATGACATCTGATCACTGGATTAAGAGGGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCCCTCTTAATCCAGTaGTCAGATGTCATGGATCCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPLLIQ*SDVMDP
Trigger: TGGATCCATGACATCTGATCACTGGATTAAGAGGGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGTTCACAATCATCTaGACCTTGCTGGCATGCATG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSFTII*TLLACM
Trigger: CATGCATGCCAGCAAGGTGCAGATGATTGTGAACGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCGTTCACAATCATCTaGACCTTGCTGGCATGCATG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSFTII*TLLACM
Trigger: CATGCATGCCAGCAAGGTGCAGATGATTGTGAACGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATGTTGAAGCGACTCTaGAGCCTTGGGGAGATAACA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFMLKRL*SLGEIT
Trigger: TGTTATCTCCCCAAGGCTGCAGAGTCGCTTCAACAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGTATTCTTCGCACTaGTTCTGGAACTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRYSSH*FWNSAT
Trigger: AGTGGCAGAGTTCCAGAAGCAGTGCGAAGAATACCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGGTATTCTTCGCACTaGTTCTGGAACTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRYSSH*FWNSAT
Trigger: AGTGGCAGAGTTCCAGAAGCAGTGCGAAGAATACCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCAGTGGGTAAACTGTaGCTCTGTCATCAGCTGATA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAVGKL*LCHQLI
Trigger: TATCAGCTGATGACAGAGGCACAGTTTACCCACTGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATCTCTGGATCTCCTaGAGGAGGACCACATTGAGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFYLWIS*RRTTLS
Trigger: ACTCAATGTGGTCCTCCTGCAGGAGATCCAGAGATA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTATCTCTGGATCTCCTaGAGGAGGACCACATTGAGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFYLWIS*RRTTLS
Trigger: ACTCAATGTGGTCCTCCTGCAGGAGATCCAGAGATA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGGGACAGGAGTACATaGCCTTGGCACTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRDRST*PWHFSF
Trigger: GAAAGAAAAGTGCCAAGGGCATGTACTCCTGTCCCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGGACAGGAGTACATaGCCTTGGCACTTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRDRST*PWHFSF
Trigger: GAAAGAAAAGTGCCAAGGGCATGTACTCCTGTCCCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCGATCTGTGCTGCCTaGCCGGTTGGGATAATAATA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSICAA*PVGIII
Trigger: TATTATTATCCCAACCGGGCAGGCAGCACAGATCGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGATCTGTGCTGCCTaGCCGGTTGGGATAATAATA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSICAA*PVGIII
Trigger: TATTATTATCCCAACCGGGCAGGCAGCACAGATCGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACAAGAAAGTCAGGTTaGACTGAGCTTGTCGAGAGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFTRKSG*TELVES
Trigger: GCTCTCGACAAGCTCAGTCCAACCTGACTTTCTTGT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTATCTTCCAGTGCCTaGAACACTTCCTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLSSSA*NTSSVP
Trigger: GGGAACAGAGGAAGTGTTCCAGGCACTGGAAGATAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTATCTTCCAGTGCCTaGAACACTTCCTCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLSSSA*NTSSVP
Trigger: GGGAACAGAGGAAGTGTTCCAGGCACTGGAAGATAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAAGGTGCAGTGCCGTaGTCAATGTCATGTAACATC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFEGAVP*SMSCNI
Trigger: GATGTTACATGACATTGACCACGGCACTGCACCTTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACAATCATGGTGGAGTaGCGAGAGTTCTTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFTIMVE*REFLVS
Trigger: CGAAACCAAGAACTCTCGCCACTCCACCATGATTGT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACAATCATGGTGGAGTaGCGAGAGTTCTTGGTTTCG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTIMVE*REFLVS
Trigger: CGAAACCAAGAACTCTCGCCACTCCACCATGATTGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTCATCCCGGTAATTaGTCAGAAAGGGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSHPGN*SERVPC
Trigger: ACATGGGACCCTTTCTGACCAATTACCGGGATGAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTCATCCCGGTAATTaGTCAGAAAGGGTCCCATGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSHPGN*SERVPC
Trigger: ACATGGGACCCTTTCTGACCAATTACCGGGATGAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCAGCCAACTGGTACATaGATTGTCCATTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFQPTGT*IVHLAF
Trigger: GAAGGCCAAATGGACAATCCATGTACCAGTTGGCTG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGCCAACTGGTACATaGATTGTCCATTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQPTGT*IVHLAF
Trigger: GAAGGCCAAATGGACAATCCATGTACCAGTTGGCTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAGTTCATGAGCCCATaGAAGTTGGTCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFEFMSP*KLVSLS
Trigger: GGACAAACTGACCAACTTCCATGGGCTCATGAACTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAGTTCATGAGCCCATaGAAGTTGGTCAGTTTGTCC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFEFMSP*KLVSLS
Trigger: GGACAAACTGACCAACTTCCATGGGCTCATGAACTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGCGCTCGAGTAATATaGAATGGAAGAAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCARVI*NGRSRG
Trigger: CCCTCTGCTTCTTCCATTCCATATTACTCGAGCGCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCGCTCGAGTAATATaGAATGGAAGAAGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCARVI*NGRSRG
Trigger: CCCTCTGCTTCTTCCATTCCATATTACTCGAGCGCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACCTTTCCCCAGAGTaGAGGGACATGAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFYLSPE*RDMSIK
Trigger: TTTGATGCTCATGTCCCTCCACTCTGGGGAAAGGTA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGAGTACATGCCCTTaGCACTTTTCTTTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRSTCP*HFSFGS
Trigger: AGAGCCGAAAGAAAAGTGCCAAGGGCATGTACTCCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGGAGTACATGCCCTTaGCACTTTTCTTTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRSTCP*HFSFGS
Trigger: AGAGCCGAAAGAAAAGTGCCAAGGGCATGTACTCCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTGGGGCTTGTCGAATaGAGTACACAATCTGATTCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLGLVE*STQSDS
Trigger: AGAATCAGATTGTGTACTTCATTCGACAAGCCCCAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGTTCATTCGGTCCATaGTGGCTTTCCAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCSFGP*WLSSCC
Trigger: ACAACAACTGGAAAGCCATCATGGACCGAATGAACA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTTCATTCGGTCCATaGTGGCTTTCCAGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCSFGP*WLSSCC
Trigger: ACAACAACTGGAAAGCCATCATGGACCGAATGAACA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAGGATTTTCTTGTCTaGTCGCTCTTTGGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFEDFLV*SLFGCH
Trigger: ATGACAGCCAAAGAGCGATCAGACAAGAAAATCCTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAGGATTTTCTTGTCTaGTCGCTCTTTGGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFEDFLV*SLFGCH
Trigger: ATGACAGCCAAAGAGCGATCAGACAAGAAAATCCTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTTTGTTATCGTCCATaGCAGAGTTCATGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLCYRP*QSSCSR
Trigger: TCGAGAGCATGAACTCTGTCATGGACGATAACAAAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTTCAAACATGCGTTaGAGCGGCTCTACTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFFSNMR*SGSTSV
Trigger: GACAGAAGTAGAGCCGCTTCAACGCATGTTTGAAAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTACTCTGCTCTCAATaGTGCTCTGCACATTGTTTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLLCSQ*CSAHCL
Trigger: CAAACAATGTGCAGAGCATCATTGAGAGCAGAGTAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGAGATGATGAAACGTaGGGTCAAAGAAGGTACCGA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRDDET*GQRRYR
Trigger: TCGGTACCTTCTTTGACCTCACGTTTCATCATCTCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCATCCTCTAGTTCTTTaGGCTTTCTCTTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHPLVL*AFSFLQ
Trigger: CTGCAGGAAAGAGAAAGCTCAAAGAACTAGAGGATG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATGGTCCTCTTGAACTaGTCTATTTTGGAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFMVLLN*SILERV
Trigger: GACTCGCTCCAAAATAGAGCAGTTCAAGAGGACCAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATGGTCCTCTTGAACTaGTCTATTTTGGAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFMVLLN*SILERV
Trigger: GACTCGCTCCAAAATAGAGCAGTTCAAGAGGACCAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCTAGTTTCACAATCTaGTCCAAGGTGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPSFTI*SKVKLS
Trigger: AGAGAGCTTCACCTTGGAGCAGATTGTGAAACTAGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTAGTTTCACAATCTaGTCCAAGGTGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPSFTI*SKVKLS
Trigger: AGAGAGCTTCACCTTGGAGCAGATTGTGAAACTAGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTGATTATCTTCCAGTaGCTGGAACACTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLIIFQ*LEHFLC
Trigger: ACAGAGGAAGTGTTCCAGGCACTGGAAGATAATCAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTGATTATCTTCCAGTaGCTGGAACACTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLIIFQ*LEHFLC
Trigger: ACAGAGGAAGTGTTCCAGGCACTGGAAGATAATCAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTCTCAATGATGCTCTaGACATTGTTTGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLSMML*TLFDVV
Trigger: GACCACGTCAAACAATGTGCAGAGCATCATTGAGAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGACTTGATGAAGTTCTaGTCCCCTAACTGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFDLMKF*SPNCRF
Trigger: AAAGCGACAGTTAGGGGAGCAGAACTTCATCAAGTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGACTTGATGAAGTTCTaGTCCCCTAACTGTCGCTTT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFDLMKF*SPNCRF
Trigger: AAAGCGACAGTTAGGGGAGCAGAACTTCATCAAGTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCAAGTAGGATGACTTaGCCAGAAACAGGATGGACT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSSRMT*PETGWT
Trigger: AGTCCATCCTGTTTCTGGCCAAGTCATCCTACTTGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAAGTAGGATGACTTaGCCAGAAACAGGATGGACT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSSRMT*PETGWT
Trigger: AGTCCATCCTGTTTCTGGCCAAGTCATCCTACTTGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTATGGCTCCAGATATaGCCATTTCTTGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVWLQI*PFLVQL
Trigger: GAGCTGAACAAGAAATGGCCATATCTGGAGCCATAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTATGGCTCCAGATATaGCCATTTCTTGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVWLQI*PFLVQL
Trigger: GAGCTGAACAAGAAATGGCCATATCTGGAGCCATAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTCGCTGTCCACTCTTaGAAGGTTTTTCGAACCATT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVAVHS*KVFRTI
Trigger: AATGGTTCGAAAAACCTTCCAAGAGTGGACAGCGAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTTCAGTCCAGGGTaGATCTTCTTATCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFFFSPG*IFLSRN
Trigger: GTTCCTGGATAAGAAGATCCACCCTGGACTGAAGAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCAGTTGTTGTTGACCTaGTCAAATAGGGCTGACTCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFQLLLT*SNRADS
Trigger: TGAGTCAGCCCTATTTGACCAGGTCAACAACAACTG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGTTGTTGTTGACCTaGTCAAATAGGGCTGACTCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQLLLT*SNRADS
Trigger: TGAGTCAGCCCTATTTGACCAGGTCAACAACAACTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCAATTGGGCGGAACATaGACTTTAGGTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFQLGGT*TLGSLE
Trigger: TTCCAGAGAACCTAAAGTCCATGTTCCGCCCAATTG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAATTGGGCGGAACATaGACTTTAGGTTCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQLGGT*TLGSLE
Trigger: TTCCAGAGAACCTAAAGTCCATGTTCCGCCCAATTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGTTCATGTCTCTCATaGAGAGCAGCAGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCSCLS*RAAEPL
Trigger: AAGAGGTTCTGCTGCTCTCCATGAGAGACATGAACA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACACTGTGTCCTTATTaGGAAAGGAGCCCTCGATTT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFTLCPY*ERSPRF
Trigger: AAATCGAGGGCTCCTTTCCCAATAAGGACACAGTGT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACACTGTGTCCTTATTaGGAAAGGAGCCCTCGATTT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTLCPY*ERSPRF
Trigger: AAATCGAGGGCTCCTTTCCCAATAAGGACACAGTGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACCCAAACATGTCCTTaGCAGGCATGTTTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTQTCP*QACLGH
Trigger: ATGACCTAAACATGCCTGCCAAGGACATGTTTGGGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAAGTCCTGGAGCTTCTaGTTGATCATGGTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFKSWSF*LIMVPN
Trigger: ATTTGGCACCATGATCAACCAGAAGCTCCAGGACTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAAGTCCTGGAGCTTCTaGTTGATCATGGTGCCAAAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFKSWSF*LIMVPN
Trigger: ATTTGGCACCATGATCAACCAGAAGCTCCAGGACTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACTCCTGCACATTCTaGAGTAGCACTGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFYSCTF*SSTGNP
Trigger: TGGATTTCCAGTGCTACTCCAGAATGTGCAGGAGTA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCATCTGCCAGCCAACTaGTACATGGATTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHLPAN*YMDCPF
Trigger: AAATGGACAATCCATGTACCAGTTGGCTGGCAGATG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAAAGACGTGTCATGTTaGCCTTTAGACCCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFKDVSC*PLDPLV
Trigger: CACCAAAGGGTCTAAAGGCCAACATGACACGTCTTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAACTTGTTATATCTCTaGATCTCCTGCAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFNLLYL*ISCRRT
Trigger: GGTCCTCCTGCAGGAGATCCAGAGATATAACAAGTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAACTTGTTATATCTCTaGATCTCCTGCAGGAGGACC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFNLLYL*ISCRRT
Trigger: GGTCCTCCTGCAGGAGATCCAGAGATATAACAAGTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCCTCGAAGAATCATaGCTGCCTGCATTACAATTT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCLEES*LPALQF
Trigger: AAATTGTAATGCAGGCAGTCATGATTCTTCGAGGCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGCCTCGAAGAATCATaGCTGCCTGCATTACAATTT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCLEES*LPALQF
Trigger: AAATTGTAATGCAGGCAGTCATGATTCTTCGAGGCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCCTGATCCAGATTTaGTTGATAATCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFFLIQI*LIISSR
Trigger: CCGGGATGAGATTATCAATCAAATCTGGATCAGGAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTCCTGATCCAGATTTaGTTGATAATCTCATCCCGG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFFLIQI*LIISSR
Trigger: CCGGGATGAGATTATCAATCAAATCTGGATCAGGAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATTTTGGCGCACATGTaGAAACTGAACAGAAGCTTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFILAHM*KLNRSL
Trigger: CAAGCTTCTGTTCAGTTTTCACATGTGCGCCAAAAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTTTGTCCAGTTCTGTaGTATTATCCCAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVCPVL*YYPSRH
Trigger: ATGCCTACTGGGATAATATCACAGAACTGGACAAAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTTTGTCCAGTTCTGTaGTATTATCCCAGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVCPVL*YYPSRH
Trigger: ATGCCTACTGGGATAATATCACAGAACTGGACAAAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCATCAAATATGCAGTTaGAGATCTCTTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHQICS*RSLPGL
Trigger: CAAGCCTGGAAGAGATCTTCAACTGCATATTTGATG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCATCAAATATGCAGTTaGAGATCTCTTCCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFHQICS*RSLPGL
Trigger: CAAGCCTGGAAGAGATCTTCAACTGCATATTTGATG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTGGGGAAGAGGTCCTaGACAATAGCATTGAACAAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLGKRS*TIALNN
Trigger: ATTGTTCAATGCTATTGTGCAGGACCTCTTCCCCAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTACTGAGTCATGTATaGCTCCAGATATGGCCATTT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVLSHV*LQIWPF
Trigger: AAATGGCCATATCTGGAGCCATACATGACTCAGTAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTACTGAGTCATGTATaGCTCCAGATATGGCCATTT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVLSHV*LQIWPF
Trigger: AAATGGCCATATCTGGAGCCATACATGACTCAGTAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAACCATTTCATCAATaGCTTGAGCCATCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFEPFHQ*LEPSAD
Trigger: ATCAGCAGATGGCTCAAGCCATTGATGAAATGGTTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCACAAGTACATAAATaGGCTCTCGATTCATCTTGC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPQVHK*ALDSSC
Trigger: GCAAGATGAATCGAGAGCCCATTTATGTACTTGTGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTTCTTCAAAGTCCTaGAGCTTCTGGTTGATCATG +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSSSKS*SFWLIM
Trigger: CATGATCAACCAGAAGCTCCAGGACTTTGAAGAAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTACCACATTCCCAATaGGCTTCACCTCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLPHSQ*ASPLLQ
Trigger: TTGAAGAAGAGGTGAAGCCCATTGGGAATGTGGTAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGTAGAAACGGAAATTaGGATTGTATTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGRNGN*DCIPPP
Trigger: AGGAGGTGGAATACAATCCCAATTTCCGTTTCTACC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGTAGAAACGGAAATTaGGATTGTATTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGRNGN*DCIPPP
Trigger: AGGAGGTGGAATACAATCCCAATTTCCGTTTCTACC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAAACCTATGCAGGTGTaGAACAAAATGATTCCGGAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFKPMQV*NKMIPD
Trigger: ATCCGGAATCATTTTGTTTCACACCTGCATAGGTTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACTCTGAGAACCAGTTaGTGGTTGTACAGTTTACTA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFTLRTS*WLYSLL
Trigger: TAGTAAACTGTACAACCATCAACTGGTTCTCAGAGT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAATGTCCTCCAGGATTaGGTTCATTTCTATCAGTGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFNVLQD*VHFYQC
Trigger: ACACTGATAGAAATGAACGCAATCCTGGAGGACATT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAATGTCCTCCAGGATTaGGTTCATTTCTATCAGTGT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFNVLQD*VHFYQC
Trigger: ACACTGATAGAAATGAACGCAATCCTGGAGGACATT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCGAAGAATCATGACTaGCTGCATTACAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSKNHD*LHYNFH
Trigger: GTGGAAATTGTAATGCAGGCAGTCATGATTCTTCGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGAAGAATCATGACTaGCTGCATTACAATTTCCAC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSKNHD*LHYNFH
Trigger: GTGGAAATTGTAATGCAGGCAGTCATGATTCTTCGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATTGGAATTGTGTGTTaGTCTGGCGGATTATACAGT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFIGIVC*SGGLYS
Trigger: ACTGTATAATCCGCCAGACCAACACACAATTCCAAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCCTGGTCTATGATATaGTTCTGGATCTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAWSMI*FWISSN
Trigger: ATTTGAAGAGATCCAGAACCATATCATAGACCAGGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCCTGGTCTATGATATaGTTCTGGATCTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAWSMI*FWISSN
Trigger: ATTTGAAGAGATCCAGAACCATATCATAGACCAGGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAAATCCAAACTGGATaGCATGTTCTAGAACTCGAA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFEIQTG*HVLELE
Trigger: TTCGAGTTCTAGAACATGCCATCCAGTTTGGATTTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAAATCCAAACTGGATaGCATGTTCTAGAACTCGAA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFEIQTG*HVLELE
Trigger: TTCGAGTTCTAGAACATGCCATCCAGTTTGGATTTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATCAAAGTTGATCAATaGCTTGATGAAGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFIKVDQ*LDEVLL
Trigger: GAGCAGAACTTCATCAAGTCATTGATCAACTTTGAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR TCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATCAAAGTTGATCAATaGCTTGATGAAGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFIKVDQ*LDEVLL
Trigger: GAGCAGAACTTCATCAAGTCATTGATCAACTTTGAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR GCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTAGTATTGACACCTaGTTCTTCTTCATGACCTTG +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFFSIDT*FFFMTL
Trigger: CAAGGTCATGAAGAAGAAGCAGGTGTCAATACTAAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATGATTTTAAGGCCCTaGTTTCCTTCCATGTTCTTA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFMILRP*FPSMFL
Trigger: TAAGAACATGGAAGGAAACCAGGGCCTTAAAATCAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCAGGGAGAACAAGATaGTCTTCATCAACTTGTTAT +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSGRTR*SSSTCY
Trigger: ATAACAAGTTGATGAAGACCATCTTGTTCTCCCTGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGGGAGAACAAGATaGTCTTCATCAACTTGTTAT +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSGRTR*SSSTCY
Trigger: ATAACAAGTTGATGAAGACCATCTTGTTCTCCCTGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTATGATATGGTTCTaGATCTCTTCAAATTCGTCA +
Preference number: 4 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSMIWF*ISSNSS
Trigger: TGACGAATTTGAAGAGATCCAGAACCATATCATAGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CCA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTATGATATGGTTCTaGATCTCTTCAAATTCGTCA +
Preference number: 4 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSMIWF*ISSNSS
Trigger: TGACGAATTTGAAGAGATCCAGAACCATATCATAGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp AGCTCCTGGGCCTGCAGTGGACTGAGGAGCTCGGACAACTCGGCCTaGCCGGGCGCCTCCCCGGCCAGCCACTTTTCGCTTCTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: SSWACSGLRSSDNSA*PGASPASHFSLLLG
Trigger: GCCGAGAAGAAGCGAAAAGTGGCTGGCCGGGGAGGCGCCCGGGCAGGCCGAGTTGTCCGAGCTCCTCAGTCCACTGCAGGCCCAGGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp CTCCTGACCATCAGGGAGCAGGGAAGCCTCTGTAGCTCCTGGGCCTaGAGTGGACTGAGGAGCTCGGACAACTCGGCCTGCCCGGGCGCC +
Preference number: 5 (lower is better)
Translates to: LLTIREQGSLCSSWA*SGLRSSDNSACPGA
Trigger: GGCGCCCGGGCAGGCCGAGTTGTCCGAGCTCCTCAGTCCACTGCAGGCCCAGGAGCTACAGAGGCTTCCCTGCTCCCTGATGGTCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TTCACACCCTCTCGAAGAAGCCGAGCAGCAATGGGGGCCTGGCCCTaGCCCAGGGACAGGGCATGGAAGCGGTGGGCCATGCCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: FTPSRRSRAAMGAWP*PRDRAWKRWAMPVC
Trigger: GCACACAGGCATGGCCCACCGCTTCCATGCCCTGTCCCTGGGCCAGGGCCAGGCCCCCATTGCTGCTCGGCTTCTTCGAGAGGGTGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CTCTGGCTCCTGACCATCAGGGAGCAGGGAAGCCTCTGTAGCTCCTaGGCCTGCAGTGGACTGAGGAGCTCGGACAACTCGGCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: LWLLTIREQGSLCSS*ACSGLRSSDNSACP
Trigger: CGGGCAGGCCGAGTTGTCCGAGCTCCTCAGTCCACTGCAGGCCCAGGAGCTACAGAGGCTTCCCTGCTCCCTGATGGTCAGGAGCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp TCCTCGTCCCGCATGGCCATCAGCATGGCGCGCATCTGTGCGATCTaGTCCAGTGCAGCCGTGTGGCCCACGGTGCTGGTAAACGGCCCT +
Preference number: 5 (lower is better)
Translates to: SSSRMAISMARICAI*SSAAVWPTVLVNGP
Trigger: AGGGCCGTTTACCAGCACCGTGGGCCACACGGCTGCACTGGATCAGATCGCACAGATGCGCGCCATGCTGATGGCCATGCGGGACGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp GACAGGGCATGGAAGCGGTGGGCCATGCCTGTGTGCTCCGCCAGCTaGAGCAGAGCGCTGGTGGGGTCTACACCGGGGGACAGGATGAAT +
Preference number: 5 (lower is better)
Translates to: DRAWKRWAMPVCSAS*SRALVGSTPGDRMN
Trigger: ATTCATCCTGTCCCCCGGTGTAGACCCCACCAGCGCTCTGCTTCAGCTGGCGGAGCACACAGGCATGGCCCACCGCTTCCATGCCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp CCGCATGGCCATCAGCATGGCGCGCATCTGTGCGATCTGATCCAGTaGAGCCGTGTGGCCCACGGTGCTGGTAAACGGCCCTTTGAACTC +
Preference number: 5 (lower is better)
Translates to: PHGHQHGAHLCDLIQ*SRVAHGAGKRPFEL
Trigger: GAGTTCAAAGGGCCGTTTACCAGCACCGTGGGCCACACGGCTGCACTGGATCAGATCGCACAGATGCGCGCCATGCTGATGGCCATGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GATTGGAGCGGAGGTTGTTCTCCTCGTCCCGCATGGCCATCAGCATaGCGCGCATCTGTGCGATCTGATCCAGTGCAGCCGTGTGGCCCA +
Preference number: 5 (lower is better)
Translates to: DWSGGCSPRPAWPSA*RASVRSDPVQPCGP
Trigger: TGGGCCACACGGCTGCACTGGATCAGATCGCACAGATGCGCGCCATGCTGATGGCCATGCGGGACGAGGAGAACAACCTCCGCTCCAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp AGCAGCCCATCTTCCACTGGTTCCAGCTCTCCTCCCAGTCCCGGGTaGTCTCCCACACTTGCTGGAGGGCATCGAGCTCCTTCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: SSPSSTGSSSPPSPG*SPTLAGGHRAPSPG
Trigger: TCCTGGAGAAGGAGCTCGATGCCCTCCAGCAAGTGTGGGAGATCACCCGGGACTGGGAGGAGAGCTGGAACCAGTGGAAGATGGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp CGTCCAGGGAGAACTGGTACATGGGGTCAATGCGGCCCATGTCATTaGGCACAAAGAACAGCACCGAGGCCCGCTGGGCACACGGACGGT +
Preference number: 5 (lower is better)
Translates to: RPGRTGTWGQCGPCH*AQRTAPRPAGHTDG
Trigger: ACCGTCCGTGTGCCCAGCGGGCCTCGGTGCTGTTCTTTGTGCTCAATGACATGGGCCGCATTGACCCCATGTACCAGTTCTCCCTGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GCCTCCTCGAACTCCAGGTCCCTGTACACCTGCTTGCCAGTGATGTaGACCAGCAGCAGTTCCGACATCTCCTGGGCCTTCCAGCCGATG +
Preference number: 5 (lower is better)
Translates to: ASSNSRSLYTCLPVM*TSSSSDISWAFQPM
Trigger: CATCGGCTGGAAGGCCCAGGAGATGTCGGAACTGCTGCTGGTGCACATCACTGGCAAGCAGGTGTACAGGGACCTGGAGTTCGAGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GTTGTTCTCCTCGTCCCGCATGGCCATCAGCATGGCGCGCATCTGTaGGATCTGATCCAGTGCAGCCGTGTGGCCCACGGTGCTGGTAAA +
Preference number: 5 (lower is better)
Translates to: VVLLVPHGHQHGAHL*DLIQCSRVAHGAGK
Trigger: TTTACCAGCACCGTGGGCCACACGGCTGCACTGGATCAGATCGCACAGATGCGCGCCATGCTGATGGCCATGCGGGACGAGGAGAACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp CACTGGTTCCAGCTCTCCTCCCAGTCCCGGGTGATCTCCCACACTTaGTGGAGGGCATCGAGCTCCTTCTCCAGGATCTGGAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: HWFQLSSQSRVISHT*WRASSSFSRIWRSL
Trigger: CAAGGACCTCCAGATCCTGGAGAAGGAGCTCGATGCCCTCCAGCAAGTGTGGGAGATCACCCGGGACTGGGAGGAGAGCTGGAACCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TGCAGCTTCACCAGCTTTTGCTGTGCGGCCATCCGGTGCTCTCTCTaGGCCTCCTCGAACTCCAGGTCCCTGTACACCTGCTTGCCAGTG +
Preference number: 5 (lower is better)
Translates to: CSFTSFCCAAIRCSL*ASSNSRSLYTCLPV
Trigger: CACTGGCAAGCAGGTGTACAGGGACCTGGAGTTCGAGGAGGCCCAGAGAGAGCACCGGATGGCCGCACAGCAAAAGCTGGTGAAGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCCATGGCTTCCGTCTGCAGGGTCTGGAAGCAGCCCATCTTCCACTaGTTCCAGCTCTCCTCCCAGTCCCGGGTGATCTCCCACACTTGC +
Preference number: 5 (lower is better)
Translates to: SMASVCRVWKQPIFH*FQLSSQSRVISHTC
Trigger: GCAAGTGTGGGAGATCACCCGGGACTGGGAGGAGAGCTGGAACCAGTGGAAGATGGGCTGCTTCCAGACCCTGCAGACGGAAGCCATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CACGGCACAGGGACGTCAGAGAGGCCTGCAGAATTTTCCAGGAGGTaGTCTTGCTGCTGCCGGTGCCACCCACAATCATGGTGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: HGTGTSERPAEFSRR*SCCCRCHPQSWWSG
Trigger: GCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTCCTGGAAAATTCTGCAGGCCTCTCTGACGTCCCTGTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp CAGTCCCAATATGGGGCAGGAAGTGGGCTCCGGAAAGGCAGTTCATaGCTCTGTCTATGCGTCGCCGAAGGATCCGCACCCAGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: QSQYGAGSGLRKGSS*LCLCVAEGSAPSGP
Trigger: AGGCCCACTGGGTGCGGATCCTTCGGCGACGCATAGACAGAGTCATGAACTGCCTTTCCGGAGCCCACTTCCTGCCCCATATTGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp CCGACATCTCCTGGGCCTTCCAGCCGATGGTCAGGGTGGAGGCCTTaGAGTCGTTCACAATCATCTGCACCTTGCTGGCATGCATGCGGC +
Preference number: 5 (lower is better)
Translates to: PTSPGPSSRWSGWRP*SRSQSSAPCWHACG
Trigger: GCCGCATGCATGCCAGCAAGGTGCAGATGATTGTGAACGACTTCAAGGCCTCCACCCTGACCATCGGCTGGAAGGCCCAGGAGATGTCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ACATCTTGGTGCAGCTTCACCAGCTTTTGCTGTGCGGCCATCCGGTaGTCTCTCTGGGCCTCCTCGAACTCCAGGTCCCTGTACACCTGC +
Preference number: 5 (lower is better)
Translates to: TSWCSFTSFCCAAIR*SLWASSNSRSLYTC
Trigger: GCAGGTGTACAGGGACCTGGAGTTCGAGGAGGCCCAGAGAGAGCACCGGATGGCCGCACAGCAAAAGCTGGTGAAGCTGCACCAAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp AGTCCTTCTGCTCCTCCAGCTCTGGTCGCTCCTTCCGAACCACAATaGCCAGCAGCTGGGCTTCCAGGCCCTGCTCCTTTACAGCGAAGT +
Preference number: 5 (lower is better)
Translates to: SPSAPPALVAPSEPQ*PAAGLPGPAPLQRS
Trigger: ACTTCGCTGTAAAGGAGCAGGGCCTGGAAGCCCAGCTGCTGGGCATTGTGGTTCGGAAGGAGCGACCAGAGCTGGAGGAGCAGAAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp AAGACGGGGTCAATGAAGATGGTGAGGGCAGGCACCGCAGGATCCTaGACAAAGTGCTCCAGAACCATGTCGTGCTCCCCCGTCCACGTG +
Preference number: 5 (lower is better)
Translates to: KTGSMKMVRAGTAGS*TKCSRTMSCSPVHV
Trigger: CACGTGGACGGGGGAGCACGACATGGTTCTGGAGCACTTTGTCCAGGATCCTGCGGTGCCTGCCCTCACCATCTTCATTGACCCCGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp GGAAGGGGACCTTGCTTGCCGTCTTCCCAACGGGCAAAGTGGTACTaGCATTCGCATACCTTCCGGAACAGCGCCGTCAGCCTTTCCCGA +
Preference number: 5 (lower is better)
Translates to: GRGPCLPSSQRAKWY*HSHTFRNSAVSLSR
Trigger: TCGGGAAAGGCTGACGGCGCTGTTCCGGAAGGTATGCGAATGTCAGTACCACTTTGCCCGTTGGGAAGACGGCAAGCAAGGTCCCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp CCTTCTCCAGGATCTGGAGGTCCTTGGAGACCGGCTGCTCGATCTTaGAGATGCCCAGATTGGAGCGGAGGTTGTTCTCCTCGTCCCGCA +
Preference number: 5 (lower is better)
Translates to: PSPGSGGPWRPAARS*RCPDWSGGCSPRPA
Trigger: TGCGGGACGAGGAGAACAACCTCCGCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCCTGGAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp TCCTTGTACTCTTTGGCTAGTCTCGTGAGGCGGCGGAACAGCCCATaGGCCATGGACTCCATGGCTTCCGTCTGCAGGGTCTGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SLYSLASLVRRRNSP*AMDSMASVCRVWKQ
Trigger: CTGCTTCCAGACCCTGCAGACGGAAGCCATGGAGTCCATGGCTCATGGGCTGTTCCGCCGCCTCACGAGACTAGCCAAAGAGTACAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ATCTCCAGCTGGCAAATGCCTGTAATCCCAGCACAGAGTCCTCCTTaGCAGACTCGGGCTCTGGCTCCTGACCATCAGGGAGCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: ISSWQMPVIPAQSPP*QTRALAPDHQGAGK
Trigger: CTTCCCTGCTCCCTGATGGTCAGGAGCCAGAGCCCGAGTCTGGCAAGGAGGACTCTGTGCTGGGATTACAGGCATTTGCCAGCTGGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp TCTCCGGTCTCCACAGACTCCTGGGCACTCAGCACTTCCTTGATCTaGCTCGTCCAGTGGATCATGGAGGTCTCTAGCCGCTGTACCAGC +
Preference number: 5 (lower is better)
Translates to: SPVSTDSWALSTSLI*LVQWIMEVSSRCTS
Trigger: GCTGGTACAGCGGCTAGAGACCTCCATGATCCACTGGACGAGGCAGATCAAGGAAGTGCTGAGTGCCCAGGAGTCTGTGGAGACCGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GGGACGTCAGAGAGGCCTGCAGAATTTTCCAGGAGGTGGTCTTGCTaGTGCCGGTGCCACCCACAATCATGGTGGAGTGGCGAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: GTSERPAEFSRRWSC*CRCHPQSWWSGESS
Trigger: AGAACTCTCGCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTCCTGGAAAATTCTGCAGGCCTCTCTGACGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ACAGGGACGTCAGAGAGGCCTGCAGAATTTTCCAGGAGGTGGTCTTaGTGCTGCCGGTGCCACCCACAATCATGGTGGAGTGGCGAGAGT +
Preference number: 5 (lower is better)
Translates to: TGTSERPAEFSRRWS*CCRCHPQSWWSGES
Trigger: ACTCTCGCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTCCTGGAAAATTCTGCAGGCCTCTCTGACGTCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CGTGGGGAAGGTCATGTTGATAATGTTGAAGCGACTCTGCAGCCTTaGGGAGATAACAGTCCGTCCACCCCCAGGAGGGCCCATGGCAGC +
Preference number: 5 (lower is better)
Translates to: RGEGHVDNVEATLQP*GDNSPSTPRRAHGS
Trigger: GCTGCCATGGGCCCTCCTGGGGGTGGACGGACTGTTATCTCCCCAAGGCTGCAGAGTCGCTTCAACATTATCAACATGACCTTCCCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CGCATGGCTTCTTCAAGGGCGGGCAATGCTTCCTCTAGATCCTTCTaGGCATTGTCGGCCAGCGCCTGGCACTTGACCTCCTCAATAGCG +
Preference number: 5 (lower is better)
Translates to: RMASSRAGNASSRSF*ALSASAWHLTSSIA
Trigger: CGCTATTGAGGAGGTCAAGTGCCAGGCGCTGGCCGACAATGCCCAGAAGGATCTAGAGGAAGCATTGCCCGCCCTTGAAGAAGCCATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCCTCCAGCTCTGGTCGCTCCTTCCGAACCACAATGCCCAGCAGCTaGGCTTCCAGGCCCTGCTCCTTTACAGCGAAGTTGACAATGGTG +
Preference number: 5 (lower is better)
Translates to: SSSSGRSFRTTMPSS*ASRPCSFTAKLTMV
Trigger: CACCATTGTCAACTTCGCTGTAAAGGAGCAGGGCCTGGAAGCCCAGCTGCTGGGCATTGTGGTTCGGAAGGAGCGACCAGAGCTGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CATTCTCCCACTCACCTGGCAGCATGGCCTTCTCCGGGGAAGAGTTaGTGTACCACAGGTGCCAGTCCCGAGGGTACTGCTCAAAGGAGT +
Preference number: 5 (lower is better)
Translates to: HSPTHLAAWPSPGKS*CTTGASPEGTAQRS
Trigger: ACTCCTTTGAGCAGTACCCTCGGGACTGGCACCTGTGGTACACCAACTCTTCCCCGGAGAAGGCCATGCTGCCAGGTGAGTGGGAGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp TCTGTGGCCCCTGGGCACCGAAGAAGCATGGAAGGGGACCTTGCTTaGCGTCTTCCCAACGGGCAAAGTGGTACTGACATTCGCATACCT +
Preference number: 5 (lower is better)
Translates to: SVAPGHRRSMEGDLA*RLPNGQSGTDIRIP
Trigger: AGGTATGCGAATGTCAGTACCACTTTGCCCGTTGGGAAGACGGCAAGCAAGGTCCCCTTCCATGCTTCTTCGGTGCCCAGGGGCCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS GCA 90 bp TCCCGAGTGGCCAGCCTGTGGAAAGTGTCCAAGAGCAGCACTCCGTaGTCTACGTCCCGGACCAACTCAAAGGCCGAGGTAATCAGATTC +
Preference number: 5 (lower is better)
Translates to: SRVASLWKVSKSSTP*STSRTNSKAEVIRF
Trigger: GAATCTGATTACCTCGGCCTTTGAGTTGGTCCGGGACGTAGAGCACGGAGTGCTGCTCTTGGACACTTTCCACAGGCTGGCCACTCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS GCA 90 bp TCCTGTTATAGTCTCGAGCAACAAGGAGCAGGTTCTCCCGGAGAATaGGCAGGTCCTCGGCGCGTTCAGCCACGTTCATCACGTAGTGCG +
Preference number: 5 (lower is better)
Translates to: SCYSLEQQGAGSPGE*AGPRRVQPRSSRSA
Trigger: CGCACTACGTGATGAACGTGGCTGAACGCGCCGAGGACCTGCGCATTCTCCGGGAGAACCTGCTCCTTGTTGCTCGAGACTATAACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GCATCGAGCTCCTTCTCCAGGATCTGGAGGTCCTTGGAGACCGGCTaGTCGATCTTGAAGATGCCCAGATTGGAGCGGAGGTTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: ASSSFSRIWRSLETG*SILKMPRLERRLFS
Trigger: GGAGAACAACCTCCGCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCCTGGAGAAGGAGCTCGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ACGTCAGAGAGGCCTGCAGAATTTTCCAGGAGGTGGTCTTGCTGCTaGCGGTGCCACCCACAATCATGGTGGAGTGGCGAGAGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: TSERPAEFSRRWSCC*RCHPQSWWSGESSW
Trigger: CCAAGAACTCTCGCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTCCTGGAAAATTCTGCAGGCCTCTCTGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp CTCTCTGCTGGACGGAAGTGGATCGTGGGCATGAGGCAGACCAGCTaGATGGGCTCCGCCTCCACTAAACAAGAATTCTTTCGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LSAGRKWIVGMRQTS*MGSASTKQEFFRSQ
Trigger: CTGGGACCGAAAGAATTCTTGTTTAGTGGAGGCGGAGCCCATGCAGCTGGTCTGCCTCATGCCCACGATCCACTTCCGTCCAGCAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCACGTTCAGGCGCAGGGCGTCCTCCATCATGTGATCCAGCCGTATaGTGTAGAGCAACCACTGCTGCTGAATCTCGGGGCCATCGTTCT +
Preference number: 5 (lower is better)
Translates to: SRSGAGRPPSCDPAV*CRATTAAESRGHRS
Trigger: AGAACGATGGCCCCGAGATTCAGCAGCAGTGGTTGCTCTACACCATACGGCTGGATCACATGATGGAGGACGCCCTGCGCCTGAACGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp AGGATGTCGGGGAGGTGGCGGAAGACAGAGATGGTGGCAAAGAGGTaGCTGCCTATGTCATTGACCACACTCGCCAGAGTCTGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RMSGRWRKTEMVAKR*LPMSLTTLARVCRV
Trigger: GACTCTGCAGACTCTGGCGAGTGTGGTCAATGACATAGGCAGCCACCTCTTTGCCACCATCTCTGTCTTCCGCCACCTCCCCGACATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp ACGAGCACTGACCACTGGCTGGAGGGCAAGGACTGGAGAACACTCTaGGCTATGGAGGTCTTTCCAGTTCCCACAGGACCCACCAGTAAG +
Preference number: 5 (lower is better)
Translates to: TSTDHWLEGKDWRTL*AMEVFPVPTGPTSK
Trigger: CTTACTGGTGGGTCCTGTGGGAACTGGAAAGACCTCCATAGCCCAGAGTGTTCTCCAGTCCTTGCCCTCCAGCCAGTGGTCAGTGCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TTTGACGTGGTCTGTGCGGACATGTTGACGACGAGCACTGACCACTaGCTGGAGGGCAAGGACTGGAGAACACTCTGGGCTATGGAGGTC +
Preference number: 5 (lower is better)
Translates to: FDVVCADMLTTSTDH*LEGKDWRTLWAMEV
Trigger: GACCTCCATAGCCCAGAGTGTTCTCCAGTCCTTGCCCTCCAGCCAGTGGTCAGTGCTCGTCGTCAACATGTCCGCACAGACCACGTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp AGTTCTCTCCGGTCTCCACAGACTCCTGGGCACTCAGCACTTCCTTaGTCTGCCTCGTCCAGTGGATCATGGAGGTCTCTAGCCGCTGTA +
Preference number: 5 (lower is better)
Translates to: SSLRSPQTPGHSALP*SASSSGSWRSLAAV
Trigger: TACAGCGGCTAGAGACCTCCATGATCCACTGGACGAGGCAGATCAAGGAAGTGCTGAGTGCCCAGGAGTCTGTGGAGACCGGAGAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp AGTGGTCTTTCCATCCCCGTTGATGGCCTTGGAAAGCTCCAGCAGTaGCCACTTCACGTTCAGGCGCAGGGCGTCCTCCATCATGTGATC +
Preference number: 5 (lower is better)
Translates to: SGLSIPVDGLGKLQQ*PLHVQAQGVLHHVI
Trigger: GATCACATGATGGAGGACGCCCTGCGCCTGAACGTGAAGTGGTCACTGCTGGAGCTTTCCAAGGCCATCAACGGGGATGGAAAGACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp GGCGGAAGACAGAGATGGTGGCAAAGAGGTGGCTGCCTATGTCATTaGCCACACTCGCCAGAGTCTGCAGAGTCGGGGAGAATTCCACCT +
Preference number: 5 (lower is better)
Translates to: GGRQRWWQRGGCLCH*PHSPESAESGRIPP
Trigger: AGGTGGAATTCTCCCCGACTCTGCAGACTCTGGCGAGTGTGGTCAATGACATAGGCAGCCACCTCTTTGCCACCATCTCTGTCTTCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp GCCGAAGTCGTAGTGGTCCTGTCTGGAGAGCTGCTGCACAGCCAGTaGGTACAGTGTGTACACCTTCTTGGCCAGGATCTTGCAGTTGCC +
Preference number: 5 (lower is better)
Translates to: AEVVVVLSGELLHSQ*VQCVHLLGQDLAVA
Trigger: GGCAACTGCAAGATCCTGGCCAAGAAGGTGTACACACTGTACTCACTGGCTGTGCAGCAGCTCTCCAGACAGGACCACTACGACTTCGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp GTCGCTTTGCTTCTGCCCACGTGGGCTCATTGCCTCGAAGAATCATaGCTGCCTGCATTACAATTTCCACCTGCGCAGGGGGTCGTCCGT +
Preference number: 5 (lower is better)
Translates to: VALLLPTWAHCLEES*LPALQFPPAQGVVR
Trigger: ACGGACGACCCCCTGCGCAGGTGGAAATTGTAATGCAGGCAGTCATGATTCTTCGAGGCAATGAGCCCACGTGGGCAGAAGCAAAGCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp TTGGTCATGATGTTCACCACATCTTGGTGCAGCTTCACCAGCTTTTaGTGTGCGGCCATCCGGTGCTCTCTCTGGGCCTCCTCGAACTCC +
Preference number: 5 (lower is better)
Translates to: LVMMFTTSWCSFTSF*CAAIRCSLWASSNS
Trigger: GGAGTTCGAGGAGGCCCAGAGAGAGCACCGGATGGCCGCACAGCAAAAGCTGGTGAAGCTGCACCAAGATGTGGTGAACATCATGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GAGAGGCCTGCAGAATTTTCCAGGAGGTGGTCTTGCTGCTGCCGGTaGCACCCACAATCATGGTGGAGTGGCGAGAGTTCTTGGTTTCGT +
Preference number: 5 (lower is better)
Translates to: ERPAEFSRRWSCCCR*HPQSWWSGESSWFR
Trigger: ACGAAACCAAGAACTCTCGCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTCCTGGAAAATTCTGCAGGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ACAGAGCACAATGTGCAGGTTGTTCCGCACGCGCTCGATGAGGTATaGAAAGAGGCTGTCCGAGGATTCTGGTATCTGTTCTGCCCGGGC +
Preference number: 5 (lower is better)
Translates to: TEHNVQVVPHALDEV*KEAVRGFWYLFCPG
Trigger: GCCCGGGCAGAACAGATACCAGAATCCTCGGACAGCCTCTTTGCATACCTCATCGAGCGCGTGCGGAACAACCTGCACATTGTGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GAATCGAGAGCCAAGGTTGGACACGATGAAGGAAGTAACACAGAATaGCACTCGGTCCTGACGCAGGGAGCGGACGATCAGCATCCGCTG +
Preference number: 5 (lower is better)
Translates to: ESRAKVGHDEGSNTE*HSVLTQGADDQHPL
Trigger: CAGCGGATGCTGATCGTCCGCTCCCTGCGTCAGGACCGAGTGGCATTCTGTGTTACTTCCTTCATCGTGTCCAACCTTGGCTCTCGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp CAAGAGAGGCTGTCCACTGAGATGTTGTTTTGGCGAGCGGCAGACTaGAGTACCGCAGTGAGGAAGCCAGTGGGGAAAGTGAAGCCAGAC +
Preference number: 5 (lower is better)
Translates to: QERLSTEMLFWRAAD*STAVRKPVGKVKPD
Trigger: GTCTGGCTTCACTTTCCCCACTGGCTTCCTCACTGCGGTACTGCAGTCTGCCGCTCGCCAAAACAACATCTCAGTGGACAGCCTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CTGACCACTGGCTGGAGGGCAAGGACTGGAGAACACTCTGGGCTATaGAGGTCTTTCCAGTTCCCACAGGACCCACCAGTAAGACAGGAT +
Preference number: 5 (lower is better)
Translates to: LTTGWRARTGEHSGL*RSFQFPQDPPVRQD
Trigger: ATCCTGTCTTACTGGTGGGTCCTGTGGGAACTGGAAAGACCTCCATAGCCCAGAGTGTTCTCCAGTCCTTGCCCTCCAGCCAGTGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GACATGTTGACGACGAGCACTGACCACTGGCTGGAGGGCAAGGACTaGAGAACACTCTGGGCTATGGAGGTCTTTCCAGTTCCCACAGGA +
Preference number: 5 (lower is better)
Translates to: DMLTTSTDHWLEGKD*RTLWAMEVFPVPTG
Trigger: TCCTGTGGGAACTGGAAAGACCTCCATAGCCCAGAGTGTTCTCCAGTCCTTGCCCTCCAGCCAGTGGTCAGTGCTCGTCGTCAACATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GTCTCCAGTTGCTCGGTCACCTCGGTGGCCGTTATCTTGGATGTCTaGAGGGTATTCACCAGCTGCACGTCATCAAGCAGAGAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: VSSCSVTSVAVILDV*RVFTSCTSSSREPV
Trigger: CACAGGCTCTCTGCTTGATGACGTGCAGCTGGTGAATACCCTCCAGACATCCAAGATAACGGCCACCGAGGTGACCGAGCAACTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp ACTGAGCTTGTCGAGAGCCATCCTGGATCTGCTGGGCCAGCTTCCTaGAGGGCGTCAAGTAGGATGACTTGGCCAGAAACAGGATGGACT +
Preference number: 5 (lower is better)
Translates to: TELVESHPGSAGPAS*RASSRMTWPETGWT
Trigger: AGTCCATCCTGTTTCTGGCCAAGTCATCCTACTTGACGCCCTTCAGGAAGCTGGCCCAGCAGATCCAGGATGGCTCTCGACAAGCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp ATGCGTCGCCGAAGGATCCGCACCCAGTGGGCCTGTCCAGAGTACTaGGTCATGTATGGCTCCAGATATGGCCATTTCTTGTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: MRRRRIRTQWACPEY*VMYGSRYGHFLFSS
Trigger: GGAGCTGAACAAGAAATGGCCATATCTGGAGCCATACATGACTCAGTACTCTGGACAGGCCCACTGGGTGCGGATCCTTCGGCGACGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp AGGTTGGACACGATGAAGGAAGTAACACAGAATGCCACTCGGTCCTaGCGCAGGGAGCGGACGATCAGCATCCGCTGCATCTCATTGCAC +
Preference number: 5 (lower is better)
Translates to: RLDTMKEVTQNATRS*RRERTISIRCISLH
Trigger: GTGCAATGAGATGCAGCGGATGCTGATCGTCCGCTCCCTGCGTCAGGACCGAGTGGCATTCTGTGTTACTTCCTTCATCGTGTCCAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp CACTTTTCTTTCGGCTCTCTGCTGGACGGAAGTGGATCGTGGGCATaGGGCAGACCAGCTGCATGGGCTCCGCCTCCACTAAACAAGAAT +
Preference number: 5 (lower is better)
Translates to: HFSFGSLLDGSGSWA*GRPAAWAPPPLNKN
Trigger: ATTCTTGTTTAGTGGAGGCGGAGCCCATGCAGCTGGTCTGCCTCATGCCCACGATCCACTTCCGTCCAGCAGAGAGCCGAAAGAAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp CTCTTTGTCCTTTACCACCACCTCAGGGTCCATCTGTACGGCCTCTaGAGGGATGTACAGTACCGTGTGACCCTCCAGCTTGTAGCGAGT +
Preference number: 5 (lower is better)
Translates to: LFVLYHHLRVHLYGL*RDVQYRVTLQLVAS
Trigger: ACTCGCTACAAGCTGGAGGGTCACACGGTACTGTACATCCCTGCAGAGGCCGTACAGATGGACCCTGAGGTGGTGGTAAAGGACAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp TTCACCAGCTGCTTGCTGATGCTGGACAGGTCCATGCAGCGATTGTaGCAGAACTCGATCTCCTCCAAAGGGCCTAAGTTCTCTCCGGTC +
Preference number: 5 (lower is better)
Translates to: FTSCLLMLDRSMQRL*QNSISSKGPKFSPV
Trigger: GACCGGAGAGAACTTAGGCCCTTTGGAGGAGATCGAGTTCTGGCACAATCGCTGCATGGACCTGTCCAGCATCAGCAAGCAGCTGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp CCGGTAATTGGTCAGAAAGGGTCCCATGTAGGACAAGAACGCAGCTaGAATCAGACAGTCGCCCACCAGGTAACCCAGATCCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PVIGQKGSHVGQERS*NQTVAHQVTQILLQ
Trigger: CTGGAGGAGGATCTGGGTTACCTGGTGGGCGACTGTCTGATTGCAGCTGCGTTCTTGTCCTACATGGGACCCTTTCTGACCAATTACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp AGCTTTCTCTTTCCTGCAGCGATGTTGATGACCAGAGAGTCCTTCTaGTCCTCCAGCTCTGGTCGCTCCTTCCGAACCACAATGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SFLFPAAMLMTRESF*SSSSGRSFRTTMPS
Trigger: GCTGGGCATTGTGGTTCGGAAGGAGCGACCAGAGCTGGAGGAGCAGAAGGACTCTCTGGTCATCAACATCGCTGCAGGAAAGAGAAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ACCTCGGTGGCCGTTATCTTGGATGTCTGGAGGGTATTCACCAGCTaGACGTCATCAAGCAGAGAGCCTGTGGCCTCATTCAACAAGCGC +
Preference number: 5 (lower is better)
Translates to: TSVAVILDVWRVFTS*TSSSREPVASFNKR
Trigger: GCGCTTGTTGAATGAGGCCACAGGCTCTCTGCTTGATGACGTGCAGCTGGTGAATACCCTCCAGACATCCAAGATAACGGCCACCGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp CGGGCCAAGTCAATGTTGATCTCTGTGGTCTCACTGGTCTCCAGTTaGTCGGTCACCTCGGTGGCCGTTATCTTGGATGTCTGGAGGGTA +
Preference number: 5 (lower is better)
Translates to: RAKSMLISVVSLVSS*SVTSVAVILDVWRV
Trigger: TACCCTCCAGACATCCAAGATAACGGCCACCGAGGTGACCGAGCAACTGGAGACCAGTGAGACCACAGAGATCAACATTGACTTGGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp TCCGGGGAAGAGTTGGTGTACCACAGGTGCCAGTCCCGAGGGTACTaGTCAAAGGAGTTCATGAGCCCATGGAAGTTGGTCAGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: SGEELVYHRCQSRGY*SKEFMSPWKLVSLS
Trigger: GGACAAACTGACCAACTTCCATGGGCTCATGAACTCCTTTGAGCAGTACCCTCGGGACTGGCACCTGTGGTACACCAACTCTTCCCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp ATGGGCTCTCGATTCATCTTGCGTTTGGTGAGGATGTCGGGGAGGTaGCGGAAGACAGAGATGGTGGCAAAGAGGTGGCTGCCTATGTCA +
Preference number: 5 (lower is better)
Translates to: MGSRFILRLVRMSGR*RKTEMVAKRWLPMS
Trigger: TGACATAGGCAGCCACCTCTTTGCCACCATCTCTGTCTTCCGCCACCTCCCCGACATCCTCACCAAACGCAAGATGAATCGAGAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CCGCACGCGCTCGATGAGGTATGCAAAGAGGCTGTCCGAGGATTCTaGTATCTGTTCTGCCCGGGCCTGGTCTATGATATGGTTCTGGAT +
Preference number: 5 (lower is better)
Translates to: PHALDEVCKEAVRGF*YLFCPGLVYDMVLD
Trigger: ATCCAGAACCATATCATAGACCAGGCCCGGGCAGAACAGATACCAGAATCCTCGGACAGCCTCTTTGCATACCTCATCGAGCGCGTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCTCACTGGTCTCCAGTTGCTCGGTCACCTCGGTGGCCGTTATCTTaGATGTCTGGAGGGTATTCACCAGCTGCACGTCATCAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: SHWSPVARSPRWPLS*MSGGYSPAARHQAE
Trigger: CTCTGCTTGATGACGTGCAGCTGGTGAATACCCTCCAGACATCCAAGATAACGGCCACCGAGGTGACCGAGCAACTGGAGACCAGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCCACTGCCTCCCACTaGCTGCTGGAGCCCCCGACC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPTASH*LLEPPT
Trigger: GGTCGGGGGCTCCAGCAGCAAGTGGGAGGCAGTGGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp TTGTTCTGCCACTCGTTGCAGTGCTGCACCAGCGAGAACTTGAGGTaGGAGCAGTCCAGCATCACGAACTGGATGTTGAGGACCGTCTCT +
Preference number: 5 (lower is better)
Translates to: LFCHSLQCCTSENLR*EQSSITNWMLRTVS
Trigger: AGAGACGGTCCTCAACATCCAGTTCGTGATGCTGGACTGCTCTCACCTCAAGTTCTCGCTGGTGCAGCACTGCAACGAGTGGCAGAACAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp CCTGCATTACAATTTCCACCTGCGCAGGGGGTCGTCCGTAGGACTTaGTCTCACCTATGTCCTTCTTGTTCAGAGACTCTAGGGCCCGCA +
Preference number: 5 (lower is better)
Translates to: PALQFPPAQGVVRRT*SHLCPSCSETLGPA
Trigger: TGCGGGCCCTAGAGTCTCTGAACAAGAAGGACATAGGTGAGATCAAGTCCTACGGACGACCCCCTGCGCAGGTGGAAATTGTAATGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp TGGGAAAGGAGCCCTCGATTTCTCGAAGGTAGCTGTCAATCTTCTTaGGTCCGTCCTCGTCCACAGAGGCACACACAGACCAGATCATGC +
Preference number: 5 (lower is better)
Translates to: WERSPRFLEGSCQSS*VRPRPQRHTQTRSC
Trigger: GCATGATCTGGTCTGTGTGTGCCTCTGTGGACGAGGACGGACGCAAGAAGATTGACAGCTACCTTCGAGAAATCGAGGGCTCCTTTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp AAGATGTCCTCGATTTCTAGCAAGTTTCGTGTGATCTGTGGCCCCTaGGCACCGAAGAAGCATGGAAGGGGACCTTGCTTGCCGTCTTCC +
Preference number: 5 (lower is better)
Translates to: KMSSISSKFRVICGP*APKKHGRGPCLPSS
Trigger: GGAAGACGGCAAGCAAGGTCCCCTTCCATGCTTCTTCGGTGCCCAGGGGCCACAGATCACACGAAACTTGCTAGAAATCGAGGACATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS CCA 90 bp AAGGATCCGCACCCAGTGGGCCTGTCCAGAGTACTGAGTCATGTATaGCTCCAGATATGGCCATTTCTTGTTCAGCTCCCGGTTCACCAG +
Preference number: 5 (lower is better)
Translates to: KDPHPVGLSRVLSHV*LQIWPFLVQLPVHQ
Trigger: CTGGTGAACCGGGAGCTGAACAAGAAATGGCCATATCTGGAGCCATACATGACTCAGTACTCTGGACAGGCCCACTGGGTGCGGATCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CGTGTGAGGTTGGCAGTCAAGGCAGATAGGATGGACAGGATCTGCTaGGCCACCACGGACAACACCTCAATGTTGATGCGGTTAAACTCG +
Preference number: 5 (lower is better)
Translates to: RVRLAVKADRMDRIC*ATTDNTSMLMRLNS
Trigger: CGAGTTTAACCGCATCAACATTGAGGTGTTGTCCGTGGTGGCCCAGCAGATCCTGTCCATCCTATCTGCCTTGACTGCCAACCTCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GAGGTGGTCTTGCTGCTGCCGGTGCCACCCACAATCATGGTGGAGTaGCGAGAGTTCTTGGTTTCGTACAACTGTAAAACCTTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: EVVLLLPVPPTIMVE*REFLVSYNCKTLVR
Trigger: CCTCACCAAGGTTTTACAGTTGTACGAAACCAAGAACTCTCGCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CCACAGCGTGTCCACGGGGCCATCAAAAAGGATCCATTTCTCGTCTaGCTTCTCATCTGCACAGGCAACCCGCATGACACTAGACAGGAT +
Preference number: 5 (lower is better)
Translates to: PQRVHGAIKKDPFLV*LLICTGNPHDTRQD
Trigger: ATCCTGTCTAGTGTCATGCGGGTTGCCTGTGCAGATGAGAAGCCAGACGAGAAATGGATCCTTTTTGATGGCCCCGTGGACACGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GGGTGGGCAGGAAGCGCTGTACCACCGTATTGTAAACGTCCAGGGTaGCCTCTGTTACCACATTCCCAATGGGCTTCACCTCTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: GWAGSAVPPYCKRPG*PLLPHSQWASPLLQ
Trigger: TTGAAGAAGAGGTGAAGCCCATTGGGAATGTGGTAACAGAGGCCACCCTGGACGTTTACAATACGGTGGTACAGCGCTTCCTGCCCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CCGAGTGATGTGTTCAATGGCCTCTCGGAAGAGCACCAGCTGCATTaGCACAACCGAAGGAGACAGATTGTACTCATTCAGGGCCGTCTC +
Preference number: 5 (lower is better)
Translates to: PSDVFNGLSEEHQLH*HNRRRQIVLIQGRL
Trigger: GAGACGGCCCTGAATGAGTACAATCTGTCTCCTTCGGTTGTGCCAATGCAGCTGGTGCTCTTCCGAGAGGCCATTGAACACATCACTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GGCAATGCTTCCTCTAGATCCTTCTGGGCATTGTCGGCCAGCGCCTaGCACTTGACCTCCTCAATAGCGATCTTCTCACTATTGGCAGTG +
Preference number: 5 (lower is better)
Translates to: GNASSRSFWALSASA*HLTSSIAIFSLLAV
Trigger: CACTGCCAATAGTGAGAAGATCGCTATTGAGGAGGTCAAGTGCCAGGCGCTGGCCGACAATGCCCAGAAGGATCTAGAGGAAGCATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CTACTTGAGCAAATATGCTCGTCTGGTCCAGAACCCAGCCCCGATTaGAGAACTGGGTGTGCATCTGTACGGCACGCAGGTAGTGCTCTT +
Preference number: 5 (lower is better)
Translates to: LLEQICSSGPEPSPD*RTGCASVRHAGSAL
Trigger: AAGAGCACTACCTGCGTGCCGTACAGATGCACACCCAGTTCTCCAATCGGGGCTGGGTTCTGGACCAGACGAGCATATTTGCTCAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208777.2
CDS TCA 90 bp ATCCTGGATCTGCTGGGCCAGCTTCCTGAAGGGCGTCAAGTAGGATaGCTTGGCCAGAAACAGGATGGACTCGATGTGTTTCACACCCTT +
Preference number: 5 (lower is better)
Translates to: ILDLLGQLPEGRQVG*LGQKQDGLDVFHTL
Trigger: AAGGGTGTGAAACACATCGAGTCCATCCTGTTTCTGGCCAAGTCATCCTACTTGACGCCCTTCAGGAAGCTGGCCCAGCAGATCCAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp AAGGCCTTCACGAATCGAGATGCCTTCATGGTTGACAGGGCCACCTaGTTATCTTCCAGTGCCTGGAACACTTCCTCTGTTCCCCTGAGC +
Preference number: 5 (lower is better)
Translates to: KAFTNRDAFMVDRAT*LSSSAWNTSSVPLS
Trigger: GCTCAGGGGAACAGAGGAAGTGTTCCAGGCACTGGAAGATAATCAGGTGGCCCTGTCAACCATGAAGGCATCTCGATTCGTGAAGGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GAACCATTTCATCAATGGCTTGAGCCATCTGCTGATAGGTATGTATaGTCTCCTCGCCAGTCCCAATATGGGGCAGGAAGTGGGCTCCGG +
Preference number: 5 (lower is better)
Translates to: EPFHQWLEPSADRYV*SPRQSQYGAGSGLR
Trigger: CCGGAGCCCACTTCCTGCCCCATATTGGGACTGGCGAGGAGAGCATACATACCTATCAGCAGATGGCTCAAGCCATTGATGAAATGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ACGATCCGAGTGATGTGTTCAATGGCCTCTCGGAAGAGCACCAGCTaGATTGGCACAACCGAAGGAGACAGATTGTACTCATTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TIRVMCSMASRKSTS*IGTTEGDRLYSFRA
Trigger: GGCCCTGAATGAGTACAATCTGTCTCCTTCGGTTGTGCCAATGCAGCTGGTGCTCTTCCGAGAGGCCATTGAACACATCACTCGGATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp CTATTGGCAGTGACGGCCTTCTGCTGCTCATCTGCTTCCCGCTTCTaGTGCACAATGATGACCAGGTATTCTTCGCACTGCTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: LLAVTAFCCSSASRF*CTMMTRYSSHCFWN
Trigger: GTTCCAGAAGCAGTGCGAAGAATACCTGGTCATCATTGTGCAGCAGAAGCGGGAAGCAGATGAGCAGCAGAAGGCCGTCACTGCCAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ACCTCCTCAATAGCGATCTTCTCACTATTGGCAGTGACGGCCTTCTaGTGCTCATCTGCTTCCCGCTTCTGCTGCACAATGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: TSSIAIFSLLAVTAF*CSSASRFCCTMMTR
Trigger: CCTGGTCATCATTGTGCAGCAGAAGCGGGAAGCAGATGAGCAGCAGAAGGCCGTCACTGCCAATAGTGAGAAGATCGCTATTGAGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp TCGGAGATCGATGCCTATGACAAAGGAGGCTCGATCTGTGCTGCCTaGCCGGTTGGGATAATAATAGCAGGGACAGGAGTACATGCCCTT +
Preference number: 5 (lower is better)
Translates to: SEIDAYDKGGSICAA*PVGIIIAGTGVHAL
Trigger: AAGGGCATGTACTCCTGTCCCTGCTATTATTATCCCAACCGGGCAGGCAGCACAGATCGAGCCTCCTTTGTCATAGGCATCGATCTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCCTTGTGTTTCTTCAGCATCTGCTCGCTATCCAGCAGGATTTGTTaGAAGGTGAGCCACTCCCCATTGAGGCTCTCCAGCATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SLCFFSICSLSSRIC*KVSHSPLRLSSISR
Trigger: CCTGGAGATGCTGGAGAGCCTCAATGGGGAGTGGCTCACCTTCCAACAAATCCTGCTGGATAGCGAGCAGATGCTGAAGAAACACAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CACAAAGGTCATCTCCACCATAAAGGAGTAGTTCTCGGCATCGGCTaGGTTCACCCCATTCTCAGGTGTGGCCAGGACTGTGTAGAGCTT +
Preference number: 5 (lower is better)
Translates to: HKGHLHHKGVVLGIG*VHPILRCGQDCVEL
Trigger: AAGCTCTACACAGTCCTGGCCACACCTGAGAATGGGGTGAACCCAGCCGATGCCGAGAACTACTCCTTTATGGTGGAGATGACCTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CAACTTGTTATATCTCTGGATCTCCTGCAGGAGGACCACATTGAGTaGGGAGGGGTCAAGAGCCAGCAACTTTCGGGTCCCCTCATAGTC +
Preference number: 5 (lower is better)
Translates to: QLVISLDLLQEDHIE*GGVKSQQLSGPLIV
Trigger: GACTATGAGGGGACCCGAAAGTTGCTGGCTCTTGACCCCTCCCCACTCAATGTGGTCCTCCTGCAGGAGATCCAGAGATATAACAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTCAGCGTTGGGGTGTaGGCCAAAGGCCTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVSVGV*AKGLRG
Trigger: CCCCCTGAGGCCTTTGGCCAACACCCCAACGCTGAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTCAGCGTTGGGGTGTaGGCCAAAGGCCTCAGGGGG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVSVGV*AKGLRG
Trigger: CCCCCTGAGGCCTTTGGCCAACACCCCAACGCTGAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAGGCCACGTCAGCGTaGGGGTGTTGGCCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFEATSA*GCWPKA
Trigger: GGCCTTTGGCCAACACCCCAACGCTGACGTGGCCTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAGGCCACGTCAGCGTaGGGGTGTTGGCCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFEATSA*GCWPKA
Trigger: GGCCTTTGGCCAACACCCCAACGCTGACGTGGCCTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp GCTCCACAAGTACATAAATGGGCTCTCGATTCATCTTGCGTTTGGTaGGGATGTCGGGGAGGTGGCGGAAGACAGAGATGGTGGCAAAGA +
Preference number: 5 (lower is better)
Translates to: APQVHKWALDSSCVW*GCRGGGGRQRWWQR
Trigger: TCTTTGCCACCATCTCTGTCTTCCGCCACCTCCCCGACATCCTCACCAAACGCAAGATGAATCGAGAGCCCATTTATGTACTTGTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp ATCCCTAGTTTCACAATCTGCTCCAAGGTGAAGCTCTCTGACTCCTaGTCAAACTCCCGCTGGACTTCCTCTTTGACCTGGTCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: IPSFTICSKVKLSDS*SNSRWTSSLTWSQC
Trigger: GCACTGGGACCAGGTCAAAGAGGAAGTCCAGCGGGAGTTTGATCAGGAGTCAGAGAGCTTCACCTTGGAGCAGATTGTGAAACTAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp GGGGAAGAGGTCCTGCACAATAGCATTGAACAATGGGACATCCACTaGCGTCAGCTTGGCGATGTTCATGTCTCTCATGGAGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GEEVLHNSIEQWDIH*RQLGDVHVSHGEQQ
Trigger: CTGCTGCTCTCCATGAGAGACATGAACATCGCCAAGCTGACGTCAGTGGATGTCCCATTGTTCAATGCTATTGTGCAGGACCTCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp GACTTAGACAGAGCACAATGTGCAGGTTGTTCCGCACGCGCTCGATaGGGTATGCAAAGAGGCTGTCCGAGGATTCTGGTATCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: DLDRAQCAGCSARAR*GMQRGCPRILVSVL
Trigger: CAGAACAGATACCAGAATCCTCGGACAGCCTCTTTGCATACCTCATCGAGCGCGTGCGGAACAACCTGCACATTGTGCTCTGTCTAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp TCCATGTTGAGCTTGCCGGACGTCTCCAGGATTTTGGCGCACATGTaGAAACTGAACAGAAGCTTGTGGCGCTCAAAAAGGGTTCGGCAG +
Preference number: 5 (lower is better)
Translates to: SMLSLPDVSRILAHM*KLNRSLWRSKRVRQ
Trigger: CTGCCGAACCCTTTTTGAGCGCCACAAGCTTCTGTTCAGTTTTCACATGTGCGCCAAAATCCTGGAGACGTCCGGCAAGCTCAACATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp TCCAGTGATCAGATGTCATGGATCCAGATCGGAGATCGATGCCTATaGCAAAGGAGGCTCGATCTGTGCTGCCTGCCCGGTTGGGATAAT +
Preference number: 5 (lower is better)
Translates to: SSDQMSWIQIGDRCL*QRRLDLCCLPGWDN
Trigger: ATTATCCCAACCGGGCAGGCAGCACAGATCGAGCCTCCTTTGTCATAGGCATCGATCTCCGATCTGGATCCATGACATCTGATCACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp AGAAACAGGATGGACTCGATGTGTTTCACACCCTTCTTCACCAGCTaGTTGCTGATGCTGGACAGGTCCATGCAGCGATTGTGCCAGAAC +
Preference number: 5 (lower is better)
Translates to: RNRMDSMCFTPFFTS*LLMLDRSMQRLCQN
Trigger: GTTCTGGCACAATCGCTGCATGGACCTGTCCAGCATCAGCAAGCAGCTGGTGAAGAAGGGTGTGAAACACATCGAGTCCATCCTGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ATTTTCAGCAGTTTGATGTTGTCAAAGCACTTTTTGAGGTGTGGCTaGACAGCCTCTGGGTTACGGGACTGGCCCAGGATCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: IFSSLMLSKHFLRCG*TASGLRDWPRISSR
Trigger: CCTGCTGGAGATCCTGGGCCAGTCCCGTAACCCAGAGGCTGTGCAGCCACACCTCAAAAAGTGCTTTGACAACATCAAACTGCTGAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp AAACGTGTGAGGTTGGCAGTCAAGGCAGATAGGATGGACAGGATCTaGTGGGCCACCACGGACAACACCTCAATGTTGATGCGGTTAAAC +
Preference number: 5 (lower is better)
Translates to: KRVRLAVKADRMDRI*WATTDNTSMLMRLN
Trigger: GTTTAACCGCATCAACATTGAGGTGTTGTCCGTGGTGGCCCAGCAGATCCTGTCCATCCTATCTGCCTTGACTGCCAACCTCACACGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp TACACACCCTTGGTCCGCTTCTCTACTCTGCTCTCAATGATGCTCTaGACATTGTTTGACGTGGTCTGTGCGGACATGTTGACGACGAGC +
Preference number: 5 (lower is better)
Translates to: YTPLVRFSTLLSMML*TLFDVVCADMLTTS
Trigger: GCTCGTCGTCAACATGTCCGCACAGACCACGTCAAACAATGTGCAGAGCATCATTGAGAGCAGAGTAGAGAAGCGGACCAAGGGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp CTGGGTGTCCACGAAAAGGAAAGACGTGGTCTGGAGTTCTACCCCTaGCTGTCGATACAAGCGCTTGATATCGTCTCGGAACTCCTGTTT +
Preference number: 5 (lower is better)
Translates to: LGVHEKERRGLEFYP*LSIQALDIVSELLF
Trigger: AAACAGGAGTTCCGAGACGATATCAAGCGCTTGTATCGACAGGCAGGGGTAGAACTCCAGACCACGTCTTTCCTTTTCGTGGACACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp AGCGATCTTCTCACTATTGGCAGTGACGGCCTTCTGCTGCTCATCTaGTTCCCGCTTCTGCTGCACAATGATGACCAGGTATTCTTCGCA +
Preference number: 5 (lower is better)
Translates to: SDLLTIGSDGLLLLI*FPLLLHNDDQVFFA
Trigger: TGCGAAGAATACCTGGTCATCATTGTGCAGCAGAAGCGGGAAGCAGATGAGCAGCAGAAGGCCGTCACTGCCAATAGTGAGAAGATCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CCCATACTGCACAGTCTCCTCGAAGTTCTCTGGGGTGATGGGAACTaGGGCTTGTCGAATGAAGTACACAATCTGATTCTGCGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PILHSLLEVLWGDGN*GLSNEVHNLILRLH
Trigger: GTGCAGACGCAGAATCAGATTGTGTACTTCATTCGACAAGCCCCAGTTCCCATCACCCCAGAGAACTTCGAGGAGACTGTGCAGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CTTATCCAGGAACCGGATCCGCTCTTTGAACAGGGCCTGCTCGTCTaGGGACAGCATGGCAATAATCCTGTTATAGTCTCGAGCAACAAG +
Preference number: 5 (lower is better)
Translates to: LIQEPDPLFEQGLLV*GQHGNNPVIVSSNK
Trigger: CTTGTTGCTCGAGACTATAACAGGATTATTGCCATGCTGTCCCCAGACGAGCAGGCCCTGTTCAAAGAGCGGATCCGGTTCCTGGATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TGGCTGTCTTCAATACTGTCAGGTCTACCAGGTCTTCATAGACCTTaGGCTCCTTCAGGAAGTCCCCAAAGATGGGAGGGCGTTTGTTGG +
Preference number: 5 (lower is better)
Translates to: WLSSILSGLPGLHRP*APSGSPQRWEGVCW
Trigger: CCAACAAACGCCCTCCCATCTTTGGGGACTTCCTGAAGGAGCCCAAGGTCTATGAAGACCTGGTAGACCTGACAGTATTGAAGACAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TTCTGTGATATTATCCCAGTAGGCATCTGCCAGCCAACTGGTACATaGATTGTCCATTTGGCCTTCACGATCCAGGACCACACCCCCACG +
Preference number: 5 (lower is better)
Translates to: FCDIIPVGICQPTGT*IVHLAFTIQDHTPT
Trigger: CGTGGGGGTGTGGTCCTGGATCGTGAAGGCCAAATGGACAATCCATGTACCAGTTGGCTGGCAGATGCCTACTGGGATAATATCACAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGAAGGGGACCTTGCTaGCCGTCTTCCCAACGGGCA +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGRGPC*PSSQRA
Trigger: TGCCCGTTGGGAAGACGGCAAGCAAGGTCCCCTTCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGAAGGGGACCTTGCTaGCCGTCTTCCCAACGGGCA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGRGPC*PSSQRA
Trigger: TGCCCGTTGGGAAGACGGCAAGCAAGGTCCCCTTCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGCCGAATGCAGTCCTaGTCCAGCGTCGCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRRMQS*SSVAVH
Trigger: GTGGACAGCGACGCTGGACAAGGACTGCATTCGGCG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGCCGAATGCAGTCCTaGTCCAGCGTCGCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRRMQS*SSVAVH
Trigger: GTGGACAGCGACGCTGGACAAGGACTGCATTCGGCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGATCCTTCTGGGCATaGTCGGCCAGCGCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRSFWA*SASAWH
Trigger: GTGCCAGGCGCTGGCCGACAATGCCCAGAAGGATCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGATCCTTCTGGGCATaGTCGGCCAGCGCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRSFWA*SASAWH
Trigger: GTGCCAGGCGCTGGCCGACAATGCCCAGAAGGATCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTCACTGGTCTCCAGTaGCTCGGTCACCTCGGTGGC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLTGLQ*LGHLGG
Trigger: GCCACCGAGGTGACCGAGCAACTGGAGACCAGTGAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTGCAGGATGGAGATaGGGAAGTCTGGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPAGWR*GSLGGG
Trigger: GCCCCCACCCAGACTTCCCAATCTCCATCCTGCAGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCTGCAGGATGGAGATaGGGAAGTCTGGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPAGWR*GSLGGG
Trigger: GCCCCCACCCAGACTTCCCAATCTCCATCCTGCAGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp TCCAGGATGCCGCCACGCACGGCTCGCAGCGTTTGCAGATTTTTATaGAAGATGTCCTCGATTTCTAGCAAGTTTCGTGTGATCTGTGGC +
Preference number: 5 (lower is better)
Translates to: SRMPPRTARSVCRFL*KMSSISSKFRVICG
Trigger: GCCACAGATCACACGAAACTTGCTAGAAATCGAGGACATCTTTCATAAAAATCTGCAAACGCTGCGAGCCGTGCGTGGCGGCATCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS TCA 90 bp CACATCCTTCTCAAAGGCCTTCACGAATCGAGATGCCTTCATGGTTaGCAGGGCCACCTGATTATCTTCCAGTGCCTGGAACACTTCCTC +
Preference number: 5 (lower is better)
Translates to: HILLKGLHESRCLHG*QGHLIIFQCLEHFL
Trigger: GAGGAAGTGTTCCAGGCACTGGAAGATAATCAGGTGGCCCTGTCAACCATGAAGGCATCTCGATTCGTGAAGGCCTTTGAGAAGGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp CATTCTCAGGTGTGGCCAGGACTGTGTAGAGCTTACAGAGGGAGATaGTCCCACTGTACTCGGGGACAGGTACCAGCTCATTACAGTTAT +
Preference number: 5 (lower is better)
Translates to: HSQVWPGLCRAYRGR*SHCTRGQVPAHYSY
Trigger: ATAACTGTAATGAGCTGGTACCTGTCCCCGAGTACAGTGGGATCATCTCCCTCTGTAAGCTCTACACAGTCCTGGCCACACCTGAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp TGGTTGTACAGTTTACTAAGGCTGGGTACTGGCGAATCCAATTCCTaGAGGGGTCTCCCACGGGACTTAGACAGAGCACAATGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: WLYSLLRLGTGESNS*RGLPRDLDRAQCAG
Trigger: ACCTGCACATTGTGCTCTGTCTAAGTCCCGTGGGAGACCCCTTCAGGAATTGGATTCGCCAGTACCCAGCCTTAGTAAACTGTACAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GCTGGATTCCGCAGGTCTGAGATGAGGGGCATGGTCCTCTTGAACTaGTCTATTTTGGAGCGAGTCGTTTCAATGATTTCCCAGTTTCGG +
Preference number: 5 (lower is better)
Translates to: AGFRRSEMRGMVLLN*SILERVVSMISQFR
Trigger: CCGAAACTGGGAAATCATTGAAACGACTCGCTCCAAAATAGAGCAGTTCAAGAGGACCATGCCCCTCATCTCAGACCTGCGGAATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp TCCTCAATAGCGATCTTCTCACTATTGGCAGTGACGGCCTTCTGCTaGTCATCTGCTTCCCGCTTCTGCTGCACAATGATGACCAGGTAT +
Preference number: 5 (lower is better)
Translates to: SSIAIFSLLAVTAFC*SSASRFCCTMMTRY
Trigger: ATACCTGGTCATCATTGTGCAGCAGAAGCGGGAAGCAGATGAGCAGCAGAAGGCCGTCACTGCCAATAGTGAGAAGATCGCTATTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GGTCCACATCCTTCTCAAAGGCCTTCACGAATCGAGATGCCTTCATaGTTGACAGGGCCACCTGATTATCTTCCAGTGCCTGGAACACTT +
Preference number: 5 (lower is better)
Translates to: GPHPSQRPSRIEMPS*LTGPPDYLPVPGTL
Trigger: AAGTGTTCCAGGCACTGGAAGATAATCAGGTGGCCCTGTCAACCATGAAGGCATCTCGATTCGTGAAGGCCTTTGAGAAGGATGTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp ACCATCTCAATAACTTCCAGAATGAGAGAGAGGCAGCGCTCCCAGTaGTCCACATCCTTCTCAAAGGCCTTCACGAATCGAGATGCCTTC +
Preference number: 5 (lower is better)
Translates to: TISITSRMRERQRSQ*STSFSKAFTNRDAF
Trigger: GAAGGCATCTCGATTCGTGAAGGCCTTTGAGAAGGATGTGGACCACTGGGAGCGCTGCCTCTCTCTCATTCTGGAAGTTATTGAGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GTCCTCCAGGATTGCGTTCATTTCTATCAGTGTCTCCAGGAGTCCTaGGTAGTGGGTGCTCCGGAGAGCGTTATTGTCTTTGTTCATTCG +
Preference number: 5 (lower is better)
Translates to: VLQDCVHFYQCLQES*VVGAPESVIVFVHS
Trigger: CGAATGAACAAAGACAATAACGCTCTCCGGAGCACCCACTACCCAGGACTCCTGGAGACACTGATAGAAATGAACGCAATCCTGGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GATTCGTCAGCTATCTGGGTGTCCACGAAAAGGAAAGACGTGGTCTaGAGTTCTACCCCTGCCTGTCGATACAAGCGCTTGATATCGTCT +
Preference number: 5 (lower is better)
Translates to: DSSAIWVSTKRKDVV*SSTPACRYKRLISS
Trigger: AGACGATATCAAGCGCTTGTATCGACAGGCAGGGGTAGAACTCCAGACCACGTCTTTCCTTTTCGTGGACACCCAGATAGCTGACGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CAGTTGAAGATCTCTTCCAGGCTTGTTGACATGACGATGAGGCCCTaGATGCCCTTCTCCAAGTCTGTCAGGGAGAACAAGATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: QLKISSRLVDMTMRP*MPFSKSVRENKMVF
Trigger: GAAGACCATCTTGTTCTCCCTGACAGACTTGGAGAAGGGCATCCAGGGCCTCATCGTCATGTCAACAAGCCTGGAAGAGATCTTCAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCATGGAAGGGGACCTaGCTTGCCGTCTTCCCAACG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAWKGT*LAVFPT
Trigger: CGTTGGGAAGACGGCAAGCAAGGTCCCCTTCCATGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTGAGCCACTCCCCATaGAGGCTCTCCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVSHSP*RLSSIS
Trigger: GGAGATGCTGGAGAGCCTCAATGGGGAGTGGCTCAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTGAGCCACTCCCCATaGAGGCTCTCCAGCATCTCC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVSHSP*RLSSIS
Trigger: GGAGATGCTGGAGAGCCTCAATGGGGAGTGGCTCAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGGATCTGGAGGTCCTaGGAGACCGGCTGCTCGATC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRIWRS*ETGCSI
Trigger: GATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGTGATCTCCCACACTaGCTGGAGGGCATCGAGCTC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGDLPH*LEGIEL
Trigger: GAGCTCGATGCCCTCCAGCAAGTGTGGGAGATCACC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGTGATCTCCCACACTaGCTGGAGGGCATCGAGCTC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGDLPH*LEGIEL
Trigger: GAGCTCGATGCCCTCCAGCAAGTGTGGGAGATCACC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCCCTAACTGTCGCTTaGCTTCTGCCCACGTGGGCT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPLTVA*LLPTWA
Trigger: AGCCCACGTGGGCAGAAGCAAAGCGACAGTTAGGGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCCCTAACTGTCGCTTaGCTTCTGCCCACGTGGGCT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPLTVA*LLPTWA
Trigger: AGCCCACGTGGGCAGAAGCAAAGCGACAGTTAGGGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATGAGGGCCCACCTGTaGCCCCTGGTGACGATGATG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFMRAHL*PLVTMM
Trigger: CATCATCGTCACCAGGGGCAACAGGTGGGCCCTCAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp TCTTTGGTCGCAGAGGCTGAGATCTCTGCAATCTTCTCCACGTGCTaGTCCATCCCTAGTTTCACAATCTGCTCCAAGGTGAAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SLVAEAEISAIFSTC*SIPSFTICSKVKLS
Trigger: AGAGAGCTTCACCTTGGAGCAGATTGTGAAACTAGGGATGGATCAGCACGTGGAGAAGATTGCAGAGATCTCAGCCTCTGCGACCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ACAGATTTGTTGAGCACTGGGTTGAGCGTGGGGTCCAGATACTCCTaGACATTCTGGAGTAGCACTGGAAATCCAAACTGGATGGCATGT +
Preference number: 5 (lower is better)
Translates to: TDLLSTGLSVGSRYS*TFWSSTGNPNWMAC
Trigger: ACATGCCATCCAGTTTGGATTTCCAGTGCTACTCCAGAATGTGCAGGAGTATCTGGACCCCACGCTCAACCCAGTGCTCAACAAATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GCGTCGCTGTCCACTCTTGGAAGGTTTTTCGAACCATTTCATCAATaGCTTGAGCCATCTGCTGATAGGTATGTATGCTCTCCTCGCCAG +
Preference number: 5 (lower is better)
Translates to: ASLSTLGRFFEPFHQ*LEPSADRYVCSPRQ
Trigger: CTGGCGAGGAGAGCATACATACCTATCAGCAGATGGCTCAAGCCATTGATGAAATGGTTCGAAAAACCTTCCAAGAGTGGACAGCGACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TTGAATTTTCAGCAGTTTGATGTTGTCAAAGCACTTTTTGAGGTGTaGCTGCACAGCCTCTGGGTTACGGGACTGGCCCAGGATCTCCAG +
Preference number: 5 (lower is better)
Translates to: LNFQQFDVVKALFEV*LHSLWVTGLAQDLQ
Trigger: CTGGAGATCCTGGGCCAGTCCCGTAACCCAGAGGCTGTGCAGCCACACCTCAAAAAGTGCTTTGACAACATCAAACTGCTGAAAATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp ACATCACCAAGCCACGACTCCACTGGTCCTTCTAGAAGTACTGGGTaGAGGAAGTCAATGTATTCACCGTCACCTGAGAACATTCCCACT +
Preference number: 5 (lower is better)
Translates to: TSPSHDSTGPSRSTG*RKSMYSPSPENIPT
Trigger: AGTGGGAATGTTCTCAGGTGACGGTGAATACATTGACTTCCTCCACCCAGTACTTCTAGAAGGACCAGTGGAGTCGTGGCTTGGTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCTTTCCAGTTCCCACAGGACCCACCAGTAAGACAGGATTCTGGTTaGCCACCAGGGTGCTCACTAAGTAGTTATACCGCACAGTATCAA +
Preference number: 5 (lower is better)
Translates to: SFQFPQDPPVRQDSG*PPGCSLSSYTAQYQ
Trigger: TTGATACTGTGCGGTATAACTACTTAGTGAGCACCCTGGTGGCCAACCAGAATCCTGTCTTACTGGTGGGTCCTGTGGGAACTGGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GCACAACCGAAGGAGACAGATTGTACTCATTCAGGGCCGTCTCCATaGCTGTCTTCAATACTGTCAGGTCTACCAGGTCTTCATAGACCT +
Preference number: 5 (lower is better)
Translates to: AQPKETDCTHSGPSP*LSSILSGLPGLHRP
Trigger: AGGTCTATGAAGACCTGGTAGACCTGACAGTATTGAAGACAGCCATGGAGACGGCCCTGAATGAGTACAATCTGTCTCCTTCGGTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GCAAAGAGGCTGTCCGAGGATTCTGGTATCTGTTCTGCCCGGGCCTaGTCTATGATATGGTTCTGGATCTCTTCAAATTCGTCAGACTTG +
Preference number: 5 (lower is better)
Translates to: AKRLSEDSGICSARA*SMIWFWISSNSSDL
Trigger: CAAGTCTGACGAATTTGAAGAGATCCAGAACCATATCATAGACCAGGCCCGGGCAGAACAGATACCAGAATCCTCGGACAGCCTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCTGAGAACCAGTTGATGGTTGTACAGTTTACTAAGGCTGGGTACTaGCGAATCCAATTCCTGAAGGGGTCTCCCACGGGACTTAGACAG +
Preference number: 5 (lower is better)
Translates to: SENQLMVVQFTKAGY*RIQFLKGSPTGLRQ
Trigger: CTGTCTAAGTCCCGTGGGAGACCCCTTCAGGAATTGGATTCGCCAGTACCCAGCCTTAGTAAACTGTACAACCATCAACTGGTTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAACCGGATCCGCTCTTaGAACAGGGCCTGCTCGTCT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFNRIRS*NRACSS
Trigger: AGACGAGCAGGCCCTGTTCAAAGAGCGGATCCGGTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCCCGTTGATGGCCTaGGAAAGCTCCAGCAGTGAC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSPLMA*ESSSSD
Trigger: GTCACTGCTGGAGCTTTCCAAGGCCATCAACGGGGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGTTCTGCCACTCGTaGCAGTGCTGCACCAGCGAG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLFCHS*QCCTSE
Trigger: CTCGCTGGTGCAGCACTGCAACGAGTGGCAGAACAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTGTTCTGCCACTCGTaGCAGTGCTGCACCAGCGAG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLFCHS*QCCTSE
Trigger: CTCGCTGGTGCAGCACTGCAACGAGTGGCAGAACAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGGTCCTTGTACTCTTaGGCTAGTCTCGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRSLYS*ASLVRR
Trigger: CCGCCTCACGAGACTAGCCAAAGAGTACAAGGACCG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGGTCCTTGTACTCTTaGGCTAGTCTCGTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRSLYS*ASLVRR
Trigger: CCGCCTCACGAGACTAGCCAAAGAGTACAAGGACCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTCTGTGCGGACATGTaGACGACGAGCACTGACCAC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVCADM*TTSTDH
Trigger: GTGGTCAGTGCTCGTCGTCAACATGTCCGCACAGAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGAAGCTTATTGGCTaGGTCCAGCAGCTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSKLIG*VQQLLP
Trigger: CGGCAGGAGCTGCTGGACCAAGCCAATAAGCTTCGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCGAAGCTTATTGGCTaGGTCCAGCAGCTCCTGCCG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSKLIG*VQQLLP
Trigger: CGGCAGGAGCTGCTGGACCAAGCCAATAAGCTTCGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGGTCCTCCAGCTTATaGCTGCGGTGGCTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRSSSL*LRWLLS
Trigger: TGACAAGAGCCACCGCAGCAATAAGCTGGAGGACCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTCTCCGGGGAAGAGTaGGTGTACCACAGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFFSGEE*VYHRCQ
Trigger: CTGGCACCTGTGGTACACCAACTCTTCCCCGGAGAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTCCGGGGAAGAGTaGGTGTACCACAGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFFSGEE*VYHRCQ
Trigger: CTGGCACCTGTGGTACACCAACTCTTCCCCGGAGAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTCCTCCACCTGCAGTaGCTCCACCAACTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVLHLQ*LHQLVQ
Trigger: CTGGACAAGTTGGTGGAGCAACTGCAGGTGGAGGAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTCCTCCACCTGCAGTaGCTCCACCAACTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVLHLQ*LHQLVQ
Trigger: CTGGACAAGTTGGTGGAGCAACTGCAGGTGGAGGAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGCTCTGTGGTCATCTaGATGCTGGCCTGCAGGATG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGSVVI*MLACRM
Trigger: CATCCTGCAGGCCAGCATCAAGATGACCACAGAGCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCAGGAGGACCACATaGAGTGGGGAGGGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCRRTT*SGEGSR
Trigger: TCTTGACCCCTCCCCACTCAATGTGGTCCTCCTGCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGCAGGAGGACCACATaGAGTGGGGAGGGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCRRTT*SGEGSR
Trigger: TCTTGACCCCTCCCCACTCAATGTGGTCCTCCTGCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp GCTCTAGAACAGGACAGAATAAGATTCAAAGTTGTAAGACGTCTGTaGAACAGGGGCTGGGGATGCAGCAGAGTTGGTGGAGTGTTAGCC +
Preference number: 5 (lower is better)
Translates to: ALEQDRIRFKVVRRL*NRGWGCSRVGGVLA
Trigger: GGCTAACACTCCACCAACTCTGCTGCATCCCCAGCCCCTGTTTCACAGACGTCTTACAACTTTGAATCTTATTCTGTCCTGTTCTAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GATGAGGTATGCAAAGAGGCTGTCCGAGGATTCTGGTATCTGTTCTaGCCGGGCCTGGTCTATGATATGGTTCTGGATCTCTTCAAATTC +
Preference number: 5 (lower is better)
Translates to: DEVCKEAVRGFWYLF*PGLVYDMVLDLFKF
Trigger: GAATTTGAAGAGATCCAGAACCATATCATAGACCAGGCCCGGGCAGAACAGATACCAGAATCCTCGGACAGCCTCTTTGCATACCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCTTTGTTCATTCGGTCCATGATGGCTTTCCAGTTGTTGTTGACCTaGTCAAATAGGGCTGACTCATTGGGCAGCTGTTTCCGGATGTCC +
Preference number: 5 (lower is better)
Translates to: SLFIRSMMAFQLLLT*SNRADSLGSCFRMS
Trigger: GGACATCCGGAAACAGCTGCCCAATGAGTCAGCCCTATTTGACCAGGTCAACAACAACTGGAAAGCCATCATGGACCGAATGAACAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp AGCTCTTGGGGAGCTTCTCCTCAAATGACGTCCAAGTCCGCATCTTaGGGTTCACGTAGTATTCATACACTGTGTCCTTATTGGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SSWGASPQMTSKSAS*GSRSIHTLCPYWER
Trigger: CCTTTCCCAATAAGGACACAGTGTATGAATACTACGTGAACCCCAAGATGCGGACTTGGACGTCATTTGAGGAGAAGCTCCCCAAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp ACATTCCCAATGGGCTTCACCTCTTCTTCAAAGTCCTGGAGCTTCTaGTTGATCATGGTGCCAAATATGCGGATGATCTGGGATTCCGTG +
Preference number: 5 (lower is better)
Translates to: TFPMGFTSSSKSWSF*LIMVPNMRMIWDSV
Trigger: CACGGAATCCCAGATCATCCGCATATTTGGCACCATGATCAACCAGAAGCTCCAGGACTTTGAAGAAGAGGTGAAGCCCATTGGGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GCCACTGACCAGTGCATGGTGACAAAGATTTGGGCCACTTTCCTGTaGATATTCTCCTGTGTCCCCAAGTCCACTCCTATAATGTACTTC +
Preference number: 5 (lower is better)
Translates to: ATDQCMVTKIWATFL*IFSCVPKSTPIMYF
Trigger: GAAGTACATTATAGGAGTGGACTTGGGGACACAGGAGAATATCCACAGGAAAGTGGCCCAAATCTTTGTCACCATGCACTGGTCAGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCTGTCAGGGAGAACAAGATGGTCTTCATCAACTTGTTATATCTCTaGATCTCCTGCAGGAGGACCACATTGAGTGGGGAGGGGTCAAGA +
Preference number: 5 (lower is better)
Translates to: SVRENKMVFINLLYL*ISCRRTTLSGEGSR
Trigger: TCTTGACCCCTCCCCACTCAATGTGGTCCTCCTGCAGGAGATCCAGAGATATAACAAGTTGATGAAGACCATCTTGTTCTCCCTGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGGTCCATGCAGCGATaGTGCCAGAACTCGATCTCC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRSMQR*CQNSIS
Trigger: GGAGATCGAGTTCTGGCACAATCGCTGCATGGACCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCTTCACCAGCTGCTaGCTGATGCTGGACAGGTCC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFFFTSC*LMLDRS
Trigger: GGACCTGTCCAGCATCAGCAAGCAGCTGGTGAAGAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGGTTGGACTGAGCTaGTCGAGAGCCATCCTGGAT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQVGLS*SRAILD
Trigger: ATCCAGGATGGCTCTCGACAAGCTCAGTCCAACCTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGCAGCAGGCTCGCATaGTTAGTCATGCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFCSRLA*LVMPLL
Trigger: CAGCAGTGGCATGACTAACAATGCGAGCCTGCTGCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACCGGCTGCTCGATCTaGAAGATGCCCAGATTGGAG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFTGCSI*KMPRLE
Trigger: CTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCTGTCATCAGGCACTaGGTGACATCAGCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAVIRH*VTSAVH
Trigger: GTGGACAGCTGATGTCACCAAGTGCCTGATGACAGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCTGTCATCAGGCACTaGGTGACATCAGCTGTCCAC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAVIRH*VTSAVH
Trigger: GTGGACAGCTGATGTCACCAAGTGCCTGATGACAGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAAGACAGGATTCTGGTaGGCCACCAGGGTGCTCACT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFKTGFW*ATRVLT
Trigger: AGTGAGCACCCTGGTGGCCAACCAGAATCCTGTCTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGAGCACCAGCTGCATaGGCACAACCGAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRAPAA*AQPKET
Trigger: TGTCTCCTTCGGTTGTGCCAATGCAGCTGGTGCTCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGAGCACCAGCTGCATaGGCACAACCGAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRAPAA*AQPKET
Trigger: TGTCTCCTTCGGTTGTGCCAATGCAGCTGGTGCTCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCAGTTCGAAGCTTATaGGCTTGGTCCAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPVRSL*AWSSSS
Trigger: GGAGCTGCTGGACCAAGCCAATAAGCTTCGAACTGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCCCACGTGGGCTCATaGCCTCGAAGAATCATGACT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAHVGS*PRRIMT
Trigger: AGTCATGATTCTTCGAGGCAATGAGCCCACGTGGGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCCCACGTGGGCTCATaGCCTCGAAGAATCATGACT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAHVGS*PRRIMT
Trigger: AGTCATGATTCTTCGAGGCAATGAGCCCACGTGGGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCCAGTCCCGGACTTaGGTGGGATTGGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFFQSRT*VGLVRK
Trigger: CTTCCTGACCAATCCCACCAAAGTCCGGGACTGGAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTCCAGTCCCGGACTTaGGTGGGATTGGTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFFQSRT*VGLVRK
Trigger: CTTCCTGACCAATCCCACCAAAGTCCGGGACTGGAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTGTTGAGCACTGGGTaGAGCGTGGGGTCCAGATAC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLLSTG*SVGSRY
Trigger: GTATCTGGACCCCACGCTCAACCCAGTGCTCAACAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGTGGATACACCAGGTaGCTGTCGTCCACAGTGGAA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGGYTR*LSSTVE
Trigger: TTCCACTGTGGACGACAGCAACCTGGTGTATCCACC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GTTGGTCAGTTTGTCCAGTTCTGTGATATTATCCCAGTAGGCATCTaGCAGCCAACTGGTACATGGATTGTCCATTTGGCCTTCACGATC +
Preference number: 5 (lower is better)
Translates to: VGQFVQFCDIIPVGI*QPTGTWIVHLAFTI
Trigger: GATCGTGAAGGCCAAATGGACAATCCATGTACCAGTTGGCTGGCAGATGCCTACTGGGATAATATCACAGAACTGGACAAACTGACCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCTGTTACCACATTCCCAATGGGCTTCACCTCTTCTTCAAAGTCCTaGAGCTTCTGGTTGATCATGGTGCCAAATATGCGGATGATCTGG +
Preference number: 5 (lower is better)
Translates to: SVTTFPMGFTSSSKS*SFWLIMVPNMRMIW
Trigger: CCAGATCATCCGCATATTTGGCACCATGATCAACCAGAAGCTCCAGGACTTTGAAGAAGAGGTGAAGCCCATTGGGAATGTGGTAACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GATACTCCTGCACATTCTGGAGTAGCACTGGAAATCCAAACTGGATaGCATGTTCTAGAACTCGAAGGTAGTCATGCATCTGCAGGTCGA +
Preference number: 5 (lower is better)
Translates to: DTPAHSGVALEIQTG*HVLELEGSHASAGR
Trigger: TCGACCTGCAGATGCATGACTACCTTCGAGTTCTAGAACATGCCATCCAGTTTGGATTTCCAGTGCTACTCCAGAATGTGCAGGAGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTCAGGGTGGAGGCCTaGAAGTCGTTCACAATCATC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVRVEA*KSFTII
Trigger: GATGATTGTGAACGACTTCAAGGCCTCCACCCTGAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTCAGGGTGGAGGCCTaGAAGTCGTTCACAATCATC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVRVEA*KSFTII
Trigger: GATGATTGTGAACGACTTCAAGGCCTCCACCCTGAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATGAAGGAGTCCTTGTaGATCTCCCAGATCTCCCGG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFMKESL*ISQISR
Trigger: CCGGGAGATCTGGGAGATCAACAAGGACTCCTTCAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAATAGGGCTGACTCATaGGGCAGCTGTTTCCGGATG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFNRADS*GSCFRM
Trigger: CATCCGGAAACAGCTGCCCAATGAGTCAGCCCTATT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTGTTGAGGAACTTCTaGAGGGCCACGCGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLLRNF*RATRQF
Trigger: AAACTGCCGCGTGGCCCTCAAGAAGTTCCTCAACAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCCACTGACGTCAGCTaGGCGATGTTCATGTCTCTC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSTDVS*AMFMSL
Trigger: GAGAGACATGAACATCGCCAAGCTGACGTCAGTGGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCACTGACGTCAGCTaGGCGATGTTCATGTCTCTC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSTDVS*AMFMSL
Trigger: GAGAGACATGAACATCGCCAAGCTGACGTCAGTGGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCAATGCGCTCGCCATaGATAAGGGTCAGCACTTTG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFAMRSP*IRVSTL
Trigger: CAAAGTGCTGACCCTTATCAATGGCGAGCGCATTGC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGCTCTGCACATTGTTaGACGTGGTCTGTGCGGACA +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFCSAHC*TWSVRT
Trigger: TGTCCGCACAGACCACGTCAAACAATGTGCAGAGCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACCGAAGGAGACAGATaGTACTCATTCAGGGCCGTC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTEGDR*YSFRAV
Trigger: GACGGCCCTGAATGAGTACAATCTGTCTCCTTCGGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGAGCTACAGATTTGTaGAGCACTGGGTTGAGCGTG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRATDL*STGLSV
Trigger: CACGCTCAACCCAGTGCTCAACAAATCTGTAGCTCG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGAGCTACAGATTTGTaGAGCACTGGGTTGAGCGTG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRATDL*STGLSV
Trigger: CACGCTCAACCCAGTGCTCAACAAATCTGTAGCTCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGGGCCAAGTCAATGTaGATCTCTGTGGTCTCACTG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRAKSM*ISVVSL
Trigger: CAGTGAGACCACAGAGATCAACATTGACTTGGCCCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATGCGGCCCATGTCATaGAGCACAAAGAACAGCACC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFMRPMS*STKNST
Trigger: GGTGCTGTTCTTTGTGCTCAATGACATGGGCCGCAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATGCGGCCCATGTCATaGAGCACAAAGAACAGCACC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFMRPMS*STKNST
Trigger: GGTGCTGTTCTTTGTGCTCAATGACATGGGCCGCAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCATCCATGTTGAGCTaGCCGGACGTCTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSSMLS*PDVSRI
Trigger: AATCCTGGAGACGTCCGGCAAGCTCAACATGGATGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGCCTTTAGACCCTTaGGTGGCTCTGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFWPLDP*VALWSS
Trigger: AGATGACCACAGAGCCACCAAAGGGTCTAAAGGCCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGGCCTTTAGACCCTTaGGTGGCTCTGTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFWPLDP*VALWSS
Trigger: AGATGACCACAGAGCCACCAAAGGGTCTAAAGGCCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGCAGCTTCTTATACTaGGCAGGCTTGGAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSSFLY*AGLEQW
Trigger: CCACTGCTCCAAGCCTGCCAAGTATAAGAAGCTGCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGGAGTACATGCCCTaGGCACTTTTCTTTCGGCTC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQEYMP*ALFFRL
Trigger: GAGCCGAAAGAAAAGTGCCAAGGGCATGTACTCCTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp AAGACCACACCAGATTTATTTCAAAGCCCTCAAAATAGAAACGTGTaGGGTTGGCAGTCAAGGCAGATAGGATGGACAGGATCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: KTTPDLFQSPQNRNV*GWQSRQIGWTGSAG
Trigger: CCCAGCAGATCCTGTCCATCCTATCTGCCTTGACTGCCAACCTCACACGTTTCTATTTTGAGGGCTTTGAAATAAATCTGGTGTGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TGTCCTTGTAGGGTACTATGTCTAGCTGAGTCGAATCCCAGGTCTTaGCAATATTTTGTAATCCCACTTCTATGGCCAGCTCTTTGGTCG +
Preference number: 5 (lower is better)
Translates to: CPCRVLCLAESNPRS*QYFVIPLLWPALWS
Trigger: CGACCAAAGAGCTGGCCATAGAAGTGGGATTACAAAATATTGCCAAGACCTGGGATTCGACTCAGCTAGACATAGTACCCTACAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp TCCGCATCTTGGGGTTCACGTAGTATTCATACACTGTGTCCTTATTaGGAAAGGAGCCCTCGATTTCTCGAAGGTAGCTGTCAATCTTCT +
Preference number: 5 (lower is better)
Translates to: SASWGSRSIHTLCPY*ERSPRFLEGSCQSS
Trigger: AGAAGATTGACAGCTACCTTCGAGAAATCGAGGGCTCCTTTCCCAATAAGGACACAGTGTATGAATACTACGTGAACCCCAAGATGCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CAGCATGCTGATATATTCTTTGTAAGAGGCCAAGCTCCCGTCCTTTaGGATGTAATAAGTGTCCAGTACAGACAACCGGTAGAAGGGAGT +
Preference number: 5 (lower is better)
Translates to: QHADIFFVRGQAPVL*DVISVQYRQPVEGS
Trigger: ACTCCCTTCTACCGGTTGTCTGTACTGGACACTTATTACATCCCAAAGGACGGGAGCTTGGCCTCTTACAAAGAATATATCAGCATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATCACCTCCAGGTCCTaGATACCACCACGGAATTTG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFITSRS*IPPRNL
Trigger: CAAATTCCGTGGTGGTATCAAGGACCTGGAGGTGAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGATATGGCCATTTCTaGTTCAGCTCCCGGTTCACC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRYGHF*FSSRFT
Trigger: GGTGAACCGGGAGCTGAACAAGAAATGGCCATATCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGATATGGCCATTTCTaGTTCAGCTCCCGGTTCACC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRYGHF*FSSRFT
Trigger: GGTGAACCGGGAGCTGAACAAGAAATGGCCATATCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGTCGCTGTCCACTCTaGGAAGGTTTTTCGAACCAT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRRCPL*EGFSNH
Trigger: ATGGTTCGAAAAACCTTCCAAGAGTGGACAGCGACG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGATGTTCACCACATCTaGGTGCAGCTTCACCAGCTT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFDVHHI*VQLHQL
Trigger: AAGCTGGTGAAGCTGCACCAAGATGTGGTGAACATC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCGAATGAAGGAGTCCTaGTTGATCTCCCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRMKES*LISQIS
Trigger: GGAGATCTGGGAGATCAACAAGGACTCCTTCATTCG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCGAATGAAGGAGTCCTaGTTGATCTCCCAGATCTCC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRMKES*LISQIS
Trigger: GGAGATCTGGGAGATCAACAAGGACTCCTTCATTCG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGGGGCATGGTCCTCTaGAACTGCTCTATTTTGGAG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRGMVL*NCSILE
Trigger: CTCCAAAATAGAGCAGTTCAAGAGGACCATGCCCCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGGGGCATGGTCCTCTaGAACTGCTCTATTTTGGAG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRGMVL*NCSILE
Trigger: CTCCAAAATAGAGCAGTTCAAGAGGACCATGCCCCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAGATGCCTTCATGGTaGACAGGGCCACCTGATTAT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFEMPSW*TGPPDY
Trigger: ATAATCAGGTGGCCCTGTCAACCATGAAGGCATCTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGGGAATATGTGGCGCTaGGTCTCTAAGTACATGTCC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFGNMWR*VSKYMS
Trigger: GGACATGTACTTAGAGACCAAGCGCCACATATTCCC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGGAATATGTGGCGCTaGGTCTCTAAGTACATGTCC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFGNMWR*VSKYMS
Trigger: GGACATGTACTTAGAGACCAAGCGCCACATATTCCC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTATATACCCAGCGCCTaGCCCAGGTCTTTGACAGTT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFYIPSA*PRSLTV
Trigger: AACTGTCAAAGACCTGGGCAAGGCGCTGGGTATATA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATATACCCAGCGCCTaGCCCAGGTCTTTGACAGTT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFYIPSA*PRSLTV
Trigger: AACTGTCAAAGACCTGGGCAAGGCGCTGGGTATATA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGTGTGTACACCTTCTaGGCCAGGATCTTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSVYTF*ARILQL
Trigger: CAACTGCAAGATCCTGGCCAAGAAGGTGTACACACT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTAAGGACAGTGCCTTaGGGTTCAAAGGGAACTCTC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLRTVP*GSKGTL
Trigger: GAGAGTTCCCTTTGAACCCAAAGGCACTGTCCTTAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTAAGGACAGTGCCTTaGGGTTCAAAGGGAACTCTC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLRTVP*GSKGTL
Trigger: GAGAGTTCCCTTTGAACCCAAAGGCACTGTCCTTAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATGATGCTCTGCACATaGTTTGACGTGGTCTGTGCG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFMMLCT*FDVVCA
Trigger: CGCACAGACCACGTCAAACAATGTGCAGAGCATCAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGACCCAAACATGTCCTaGGCAGGCATGTTTAGGTCA +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFDPNMS*AGMFRS
Trigger: TGACCTAAACATGCCTGCCAAGGACATGTTTGGGTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCCGAGCTAAGGATGTaGTTGATGTCTTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPELRM*LMSSRK
Trigger: CTTCCTGGAAGACATCAACAACATCCTTAGCTCGGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGCTGCGGTGGCTCTaGTCAATGCTGAGGATAAAG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLLRWL*SMLRIK
Trigger: CTTTATCCTCAGCATTGACAAGAGCCACCGCAGCAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCACGCAGGAAGAAGTaGTACTCATCCATGTTGAGC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPRRKK*YSSMLS
Trigger: GCTCAACATGGATGAGTACAACTTCTTCCTGCGTGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCACGCAGGAAGAAGTaGTACTCATCCATGTTGAGC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPRRKK*YSSMLS
Trigger: GCTCAACATGGATGAGTACAACTTCTTCCTGCGTGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACATGGATTGTCCATTaGGCCTTCACGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTWIVH*AFTIQD
Trigger: GTCCTGGATCGTGAAGGCCAAATGGACAATCCATGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCAAGCTCCCGTCCTTaGGGATGTAATAAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFPSSRP*GCNKCP
Trigger: TGGACACTTATTACATCCCAAAGGACGGGAGCTTGG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCCAAGCTCCCGTCCTTaGGGATGTAATAAGTGTCCA +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFPSSRP*GCNKCP
Trigger: TGGACACTTATTACATCCCAAAGGACGGGAGCTTGG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp GAAGCTTTTTATATCCAGACACGAGCTCCAGGTAGTTTGTGGGTGTaGCATAGTTGTATCTCCGCAGTTCCAACAGCATCTTCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: EAFYIQTRAPGSLWV*HSCISAVPTASSGN
Trigger: ATTCCCAGAAGATGCTGTTGGAACTGCGGAGATACAACTATGTCACACCCACAAACTACCTGGAGCTCGTGTCTGGATATAAAAAGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp ATGTCCTCTCCAAGGAAGATATTCTCTAGGTACATCCACTGTCTCTaGACAGTGAGGACCATCTCAATAACTTCCAGAATGAGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: MSSPRKIFSRYIHCL*TVRTISITSRMRER
Trigger: CCTCTCTCTCATTCTGGAAGTTATTGAGATGGTCCTCACTGTGCAGAGACAGTGGATGTACCTAGAGAATATCTTCCTTGGAGAGGACAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 90 bp GAGATGTTGTCTTTATCAAAGTTGATCAATGACTTGATGAAGTTCTaGTCCCCTAACTGTCGCTTTGCTTCTGCCCACGTGGGCTCATTG +
Preference number: 5 (lower is better)
Translates to: EMLSLSKLINDLMKF*SPNCRFASAHVGSL
Trigger: CAATGAGCCCACGTGGGCAGAAGCAAAGCGACAGTTAGGGGAGCAGAACTTCATCAAGTCATTGATCAACTTTGATAAAGACAACATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp GACCAGAGTTCCCCAAGTACTCATAACCATATTGGAATTGTGTGTTaGTCTGGCGGATTATACAGTCATCCACATCCTTCTCCCAGTAGA +
Preference number: 5 (lower is better)
Translates to: DQSSPSTHNHIGIVC*SGGLYSHPHPSPSR
Trigger: TCTACTGGGAGAAGGATGTGGATGACTGTATAATCCGCCAGACCAACACACAATTCCAATATGGTTATGAGTACTTGGGGAACTCTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGATGGGAACTGGGGCTaGTCGAATGAAGTACACAAT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFDGNWG*SNEVHN
Trigger: ATTGTGTACTTCATTCGACAAGCCCCAGTTCCCATC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGATGGGAACTGGGGCTaGTCGAATGAAGTACACAAT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFDGNWG*SNEVHN
Trigger: ATTGTGTACTTCATTCGACAAGCCCCAGTTCCCATC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGTGTCTTGTCAAAGTaGACATCCAGCATGCCCACT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSVLSK*TSSMPT
Trigger: AGTGGGCATGCTGGATGTCAACTTTGACAAGACACT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCTTTCCAGTTGTTGTaGACCTGGTCAAATAGGGCT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFAFQLL*TWSNRA
Trigger: AGCCCTATTTGACCAGGTCAACAACAACTGGAAAGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCATTTGTCTCTCTTGTaGAGGAACTTCTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHLSLL*RNFLRA
Trigger: GGCCCTCAAGAAGTTCCTCAACAAGAGAGACAAATG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCATTTGTCTCTCTTGTaGAGGAACTTCTTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFHLSLL*RNFLRA
Trigger: GGCCCTCAAGAAGTTCCTCAACAAGAGAGACAAATG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAAGCCCTCGGAGCAGTaGACCACGATGACATATATA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFKPSEQ*TTMTYI
Trigger: TATATATGTCATCGTGGTCAACTGCTCCGAGGGCTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACACTGTGTCCTTATaGGGAAAGGAGCCCTCGATT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFYTVSL*GKEPSI
Trigger: AATCGAGGGCTCCTTTCCCAATAAGGACACAGTGTA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTACACTGTGTCCTTATaGGGAAAGGAGCCCTCGATT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFYTVSL*GKEPSI
Trigger: AATCGAGGGCTCCTTTCCCAATAAGGACACAGTGTA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTGGGGAAGGTCATGTaGATAATGTTGAAGCGACTC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVGKVM*IMLKRL
Trigger: GAGTCGCTTCAACATTATCAACATGACCTTCCCCAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTGGGGAAGGTCATGTaGATAATGTTGAAGCGACTC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVGKVM*IMLKRL
Trigger: GAGTCGCTTCAACATTATCAACATGACCTTCCCCAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCCTGGAGCTTCTGGTaGATCATGGTGCCAAATATG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSWSFW*IMVPNM
Trigger: CATATTTGGCACCATGATCAACCAGAAGCTCCAGGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTTTACAGCGAAGTaGACAATGGTGGTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSFTAK*TMVVLA
Trigger: GGCTAAGACCACCATTGTCAACTTCGCTGTAAAGGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAACTGGTACATGGATaGTCCATTTGGCCTTCACGA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQLVHG*SIWPSR
Trigger: TCGTGAAGGCCAAATGGACAATCCATGTACCAGTTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATGAGCCCATGGAAGTaGGTCAGTTTGTCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFMSPWK*VSLSSS
Trigger: AGAACTGGACAAACTGACCAACTTCCATGGGCTCAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAATCGAGAGCCAAGGTaGGACACGATGAAGGAAGTA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFNREPR*DTMKEV
Trigger: TACTTCCTTCATCGTGTCCAACCTTGGCTCTCGATT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGTTGCTCCACCAACTaGTCCAGATTAGGCATCCAA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSCSTN*SRLGIQ
Trigger: TTGGATGCCTAATCTGGACAAGTTGGTGGAGCAACT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTATACTTGGCAGGCTaGGAGCAGTGGGTAAACTGT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLYLAG*EQWVNC
Trigger: ACAGTTTACCCACTGCTCCAAGCCTGCCAAGTATAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 90 bp CTTGTAGCGAGTATCTGTCAGAGAGGCCAAAAACCTATGCAGGTGTaGAACAAAATGATTCCGGATGCTCTCAGGCCAAGACTTATTCAT +
Preference number: 5 (lower is better)
Translates to: LVASICQRGQKPMQV*NKMIPDALRPRLIH
Trigger: ATGAATAAGTCTTGGCCTGAGAGCATCCGGAATCATTTTGTTTCACACCTGCATAGGTTTTTGGCCTCTCTGACAGATACTCGCTACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCACGGCTCGCAGCGTTaGCAGATTTTTATGAAAGAT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHGSQR*QIFMKD
Trigger: ATCTTTCATAAAAATCTGCAAACGCTGCGAGCCGTG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCACGGCTCGCAGCGTTaGCAGATTTTTATGAAAGAT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFHGSQR*QIFMKD
Trigger: ATCTTTCATAAAAATCTGCAAACGCTGCGAGCCGTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCATTTCATCAATGGCTaGAGCCATCTGCTGATAGGT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFHFING*SHLLIG
Trigger: ACCTATCAGCAGATGGCTCAAGCCATTGATGAAATG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCATTTCATCAATGGCTaGAGCCATCTGCTGATAGGT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFHFING*SHLLIG
Trigger: ACCTATCAGCAGATGGCTCAAGCCATTGATGAAATG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGAATCAGGAGTGTCTaGTCAAAGTTGACATCCAGC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRIRSV*SKLTSS
Trigger: GCTGGATGTCAACTTTGACAAGACACTCCTGATTCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTCTTGAACTTCTCCTaGTGTTTCTTCAGCATCTGC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVLNFS*CFFSIC
Trigger: GCAGATGCTGAAGAAACACAAGGAGAAGTTCAAGAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGGATAAGGCCTGTCTaGAACTTCTCCTTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFWIRPV*NFSLCF
Trigger: GAAACACAAGGAGAAGTTCAAGACAGGCCTTATCCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGGATAAGGCCTGTCTaGAACTTCTCCTTGTGTTTC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFWIRPV*NFSLCF
Trigger: GAAACACAAGGAGAAGTTCAAGACAGGCCTTATCCA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTGGTAAACGGCCCTTaGAACTCAAAGTCTTCTAGA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLVNGP*NSKSSR
Trigger: TCTAGAAGACTTTGAGTTCAAAGGGCCGTTTACCAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAATGTCCTCCAGGATaGCGTTCATTTCTATCAGTG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFECPPG*RSFLSV
Trigger: CACTGATAGAAATGAACGCAATCCTGGAGGACATTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAATGTCCTCCAGGATaGCGTTCATTTCTATCAGTG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFECPPG*RSFLSV
Trigger: CACTGATAGAAATGAACGCAATCCTGGAGGACATTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCAGTCTTTCACCCATTaGTCTCTCTTGTTGAGGAAC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFQSFTH*SLLLRN
Trigger: GTTCCTCAACAAGAGAGACAAATGGGTGAAAGACTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTACCTTGAGGATTTTCTaGTCTGATCGCTCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFTLRIF*SDRSLA
Trigger: AGCCAAAGAGCGATCAGACAAGAAAATCCTCAAGGT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACCTTGAGGATTTTCTaGTCTGATCGCTCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFTLRIF*SDRSLA
Trigger: AGCCAAAGAGCGATCAGACAAGAAAATCCTCAAGGT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTAAGTCTCATGATCTaGGTCAAGTTCCCCCTGATG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLSLMI*VKFPLM
Trigger: CATCAGGGGGAACTTGACCAAGATCATGAGACTTAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGACAACACCTCAATGTaGATGCGGTTAAACTCGTCA +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFDNTSM*MRLNSS
Trigger: TGACGAGTTTAACCGCATCAACATTGAGGTGTTGTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGACAACACCTCAATGTaGATGCGGTTAAACTCGTCA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFDNTSM*MRLNSS
Trigger: TGACGAGTTTAACCGCATCAACATTGAGGTGTTGTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCCTGCACAATAGCATaGAACAATGGGACATCCACT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSCTIA*NNGTST
Trigger: AGTGGATGTCCCATTGTTCAATGCTATTGTGCAGGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTACAACTGTAAAACCTaGGTGAGGGTAAAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFYNCKT*VRVKGV
Trigger: CACACCCTTTACCCTCACCAAGGTTTTACAGTTGTA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTACAACTGTAAAACCTaGGTGAGGGTAAAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFYNCKT*VRVKGV
Trigger: CACACCCTTTACCCTCACCAAGGTTTTACAGTTGTA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATAAGGGTCAGCACTTaGTTATCGTCCATGACAGAG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFIRVST*LSSMTE
Trigger: CTCTGTCATGGACGATAACAAAGTGCTGACCCTTAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTTTTCAAACATGCGTaGAAGCGGCTCTACTTCTGT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLFKHA*KRLYFC
Trigger: ACAGAAGTAGAGCCGCTTCAACGCATGTTTGAAAAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAAAGTAATCATGCTTTaGCCCCCGAATGGCACATAC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFKVIML*PPNGTY
Trigger: GTATGTGCCATTCGGGGGCAAAAGCATGATTACTTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAAAGTAATCATGCTTTaGCCCCCGAATGGCACATAC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFKVIML*PPNGTY
Trigger: GTATGTGCCATTCGGGGGCAAAAGCATGATTACTTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTCATGTTGATAATGTaGAAGCGACTCTGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVMLIM*KRLCSL
Trigger: AAGGCTGCAGAGTCGCTTCAACATTATCAACATGAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTCATGTTGATAATGTaGAAGCGACTCTGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVMLIM*KRLCSL
Trigger: AAGGCTGCAGAGTCGCTTCAACATTATCAACATGAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGAGCTAAGGATGTTGTaGATGTCTTCCAGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFELRML*MSSRKD
Trigger: ATCCTTCCTGGAAGACATCAACAACATCCTTAGCTC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGAGCTAAGGATGTTGTaGATGTCTTCCAGGAAGGAT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFELRML*MSSRKD
Trigger: ATCCTTCCTGGAAGACATCAACAACATCCTTAGCTC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTGTATTCCACCTCCTaGTCACCAATTCGAATCAGC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLYSTS*SPIRIS
Trigger: GCTGATTCGAATTGGTGACAAGGAGGTGGAATACAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 90 bp CTAGTTTCGTCAATCTTAAACAATCCAGTTCGAAGCTTATTGGCTTaGTCCAGCAGCTCCTGCCGCTTTTCTCCCAGAAGCTTTTTATAT +
Preference number: 5 (lower is better)
Translates to: LVSSILNNPVRSLLA*SSSSCRFSPRSFLY
Trigger: ATATAAAAAGCTTCTGGGAGAAAAGCGGCAGGAGCTGCTGGACCAAGCCAATAAGCTTCGAACTGGATTGTTTAAGATTGACGAAACTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTGAACTGCTCTATTTaGGAGCGAGTCGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLNCSI*ERVVSM
Trigger: CATTGAAACGACTCGCTCCAAAATAGAGCAGTTCAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGAACTGCTCTATTTaGGAGCGAGTCGTTTCAATG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLNCSI*ERVVSM
Trigger: CATTGAAACGACTCGCTCCAAAATAGAGCAGTTCAA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATGATGGCTTTCCAGTaGTTGTTGACCTGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFMMAFQ*LLTWSN
Trigger: ATTTGACCAGGTCAACAACAACTGGAAAGCCATCAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAGAGCGTTATTGTCTTaGTTCATTCGGTCCATGATG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFRALLS*FIRSMM
Trigger: CATCATGGACCGAATGAACAAAGACAATAACGCTCT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAGAGCGTTATTGTCTTaGTTCATTCGGTCCATGATG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFRALLS*FIRSMM
Trigger: CATCATGGACCGAATGAACAAAGACAATAACGCTCT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATAACCATATTGGAATaGTGTGTTGGTCTGGCGGAT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFITILE*CVGLAD
Trigger: ATCCGCCAGACCAACACACAATTCCAATATGGTTAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCACTCTGAGAACCAGTaGATGGTTGTACAGTTTACT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFHSENQ*MVVQFT
Trigger: AGTAAACTGTACAACCATCAACTGGTTCTCAGAGTG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTAAGTTGATCAATGACTaGATGAAGTTCTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFKLIND*MKFCSP
Trigger: AGGGGAGCAGAACTTCATCAAGTCATTGATCAACTT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTAAGTTGATCAATGACTaGATGAAGTTCTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFKLIND*MKFCSP
Trigger: AGGGGAGCAGAACTTCATCAAGTCATTGATCAACTT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCTTCCTGATCCAGATTaGATTGATAATCTCATCCCG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFLPDPD*IDNLIP
Trigger: CGGGATGAGATTATCAATCAAATCTGGATCAGGAAG...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTCTTCCTGATCCAGATTaGATTGATAATCTCATCCCG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFLPDPD*IDNLIP
Trigger: CGGGATGAGATTATCAATCAAATCTGGATCAGGAAG...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTCATCCTCTAGTTCTTaGAGCTTTCTCTTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFSSSSS*SFLFPA
Trigger: TGCAGGAAAGAGAAAGCTCAAAGAACTAGAGGATGA...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTCATCCTCTAGTTCTTaGAGCTTTCTCTTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFSSSSS*SFLFPA
Trigger: TGCAGGAAAGAGAAAGCTCAAAGAACTAGAGGATGA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGCATCAAATATGCAGTaGAAGATCTCTTCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFASNMQ*KISSRL
Trigger: AAGCCTGGAAGAGATCTTCAACTGCATATTTGATGC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTGTACTCATAACCATATaGGAATTGTGTGTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFVLITI*ELCVGL
Trigger: CAGACCAACACACAATTCCAATATGGTTATGAGTAC...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTGTACTCATAACCATATaGGAATTGTGTGTTGGTCTG +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFVLITI*ELCVGL
Trigger: CAGACCAACACACAATTCCAATATGGTTATGAGTAC...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTGGAAGTTGGTCAGTTaGTCCAGTTCTGTGATATTA +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFWKLVS*SSSVIL
Trigger: TAATATCACAGAACTGGACAAACTGACCAACTTCCA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTATGGTCTTCATCAACTaGTTATATCTCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFMVFIN*LYLWIS
Trigger: GGAGATCCAGAGATATAACAAGTTGATGAAGACCAT...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TTGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTATGGTCTTCATCAACTaGTTATATCTCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: LVLHGFYCTERQYKSSTFMVFIN*LYLWIS
Trigger: GGAGATCCAGAGATATAACAAGTTGATGAAGACCAT...AAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS-3UTR CAA 90 bp TGGTTTTGCACGGTTTTTACTGCACTGAGCGCCAATACAAGTCTTCCACCTTTTTTCTTCTTCATGACCTaGAGGATTTTCTTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: WFCTVFTALSANTSLPPFFFFMT*RIFLSD
Trigger: ATCAGACAAGAAAATCCTCAAGGTCATGAAGAAGAA...AAAAGGTGGAAGACTTGTATTGGCGCTCAGTGCAGTAAAAACCGTGCAAAACCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000108659.2
CDS GCA 72 bp GCCTGCAGTGGACTGAGGAGCTCGGACAACTCGGCCTaGCCGGGCGCCTCCCCGGCCAGCCACTTTTCGCTT +
Preference number: 6 (lower is better)
Translates to: ACSGLRSSDNSA*PGASPASHFSL
Trigger: AAGCGAAAAGTGGCTGGCCGGGGAGGCGCCCGGGCAGGCCGAGTTGTCCGAGCTCCTCAGTCCACTGCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp TGGAAGCGGTGGGCCATGCCTGTGTGCTCCGCCAGCTaGAGCAGAGCGCTGGTGGGGTCTACACCGGGGGAC +
Preference number: 6 (lower is better)
Translates to: WKRWAMPVCSAS*SRALVGSTPGD
Trigger: GTCCCCCGGTGTAGACCCCACCAGCGCTCTGCTTCAGCTGGCGGAGCACACAGGCATGGCCCACCGCTTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CTCGTCCCGCATGGCCATCAGCATGGCGCGCATCTGTaGGATCTGATCCAGTGCAGCCGTGTGGCCCACGGT +
Preference number: 6 (lower is better)
Translates to: LVPHGHQHGAHL*DLIQCSRVAHG
Trigger: ACCGTGGGCCACACGGCTGCACTGGATCAGATCGCACAGATGCGCGCCATGCTGATGGCCATGCGGGACGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CGCATGGCCATCAGCATGGCGCGCATCTGTGCGATCTaGTCCAGTGCAGCCGTGTGGCCCACGGTGCTGGTA +
Preference number: 6 (lower is better)
Translates to: RMAISMARICAI*SSAAVWPTVLV
Trigger: TACCAGCACCGTGGGCCACACGGCTGCACTGGATCAGATCGCACAGATGCGCGCCATGCTGATGGCCATGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp GGCGACGCTTCTTGCCAGCATAGCGCAACAGGGAAGTaGGGGCGCGCAGGCCGAAGTCGTAGTGGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: GDASCQHSATGK*GRAGRSRSGPV
Trigger: GACAGGACCACTACGACTTCGGCCTGCGCGCCCTCACTTCCCTGTTGCGCTATGCTGGCAAGAAGCGTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp ATCAGGGAGCAGGGAAGCCTCTGTAGCTCCTGGGCCTaGAGTGGACTGAGGAGCTCGGACAACTCGGCCTGC +
Preference number: 6 (lower is better)
Translates to: IREQGSLCSSWA*SGLRSSDNSAC
Trigger: GCAGGCCGAGTTGTCCGAGCTCCTCAGTCCACTGCAGGCCCAGGAGCTACAGAGGCTTCCCTGCTCCCTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CATCAGCATGGCGCGCATCTGTGCGATCTGATCCAGTaGAGCCGTGTGGCCCACGGTGCTGGTAAACGGCCC +
Preference number: 6 (lower is better)
Translates to: HQHGAHLCDLIQ*SRVAHGAGKRP
Trigger: GGGCCGTTTACCAGCACCGTGGGCCACACGGCTGCACTGGATCAGATCGCACAGATGCGCGCCATGCTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CTCTGGCCACCAACCCTGGTGGGTGTGATCTGGGGTTaGAGGGAAAGCAGGGTCTCAAAGAGGGTCCGGGCC +
Preference number: 6 (lower is better)
Translates to: LWPPTLVGVIWG*RESRVSKRVRA
Trigger: GGCCCGGACCCTCTTTGAGACCCTGCTTTCCCTGCAACCCCAGATCACACCCACCAGGGTTGGTGGCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GCTCTGGCCACCAACCCTGGTGGGTGTGATCTGGGGTaGCAGGGAAAGCAGGGTCTCAAAGAGGGTCCGGGC +
Preference number: 6 (lower is better)
Translates to: ALATNPGGCDLG*QGKQGLKEGPG
Trigger: GCCCGGACCCTCTTTGAGACCCTGCTTTCCCTGCAACCCCAGATCACACCCACCAGGGTTGGTGGCCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp TTCGGCTCTCTGCTGGACGGAAGTGGATCGTGGGCATaGGGCAGACCAGCTGCATGGGCTCCGCCTCCACTA +
Preference number: 6 (lower is better)
Translates to: FGSLLDGSGSWA*GRPAAWAPPPL
Trigger: TAGTGGAGGCGGAGCCCATGCAGCTGGTCTGCCTCATGCCCACGATCCACTTCCGTCCAGCAGAGAGCCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp ATGGTGAGGGCAGGCACCGCAGGATCCTGGACAAAGTaGTCCAGAACCATGTCGTGCTCCCCCGTCCACGTG +
Preference number: 6 (lower is better)
Translates to: MVRAGTAGSWTK*SRTMSCSPVHV
Trigger: CACGTGGACGGGGGAGCACGACATGGTTCTGGAGCACTTTGTCCAGGATCCTGCGGTGCCTGCCCTCACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TGCAGCTTCACCAGCTTTTGCTGTGCGGCCATCCGGTaGTCTCTCTGGGCCTCCTCGAACTCCAGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: CSFTSFCCAAIR*SLWASSNSRSL
Trigger: CAGGGACCTGGAGTTCGAGGAGGCCCAGAGAGAGCACCGGATGGCCGCACAGCAAAAGCTGGTGAAGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp AGGTTGGGTAGGTCATGCTGCAGGGTGTCCATGAGCTaGAGGCTGACCCCTAGCTCCTCCAGCGTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: RLGRSCCRVSMS*RLTPSSSSVWG
Trigger: TCCCCAGACGCTGGAGGAGCTAGGGGTCAGCCTGCAGCTCATGGACACCCTGCAGCATGACCTACCCAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CAGCTCTCCTCCCAGTCCCGGGTGATCTCCCACACTTaGTGGAGGGCATCGAGCTCCTTCTCCAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: QLSSQSRVISHT*WRASSSFSRIW
Trigger: CCAGATCCTGGAGAAGGAGCTCGATGCCCTCCAGCAAGTGTGGGAGATCACCCGGGACTGGGAGGAGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GCTCCTCCAGCTCTGGTCGCTCCTTCCGAACCACAATaGCCAGCAGCTGGGCTTCCAGGCCCTGCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: APPALVAPSEPQ*PAAGLPGPAPL
Trigger: TAAAGGAGCAGGGCCTGGAAGCCCAGCTGCTGGGCATTGTGGTTCGGAAGGAGCGACCAGAGCTGGAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCCCAGCACAGAGTCCTCCTTGCCAGACTCGGGCTCTaGCTCCTGACCATCAGGGAGCAGGGAAGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: SQHRVLLARLGL*LLTIREQGSLC
Trigger: ACAGAGGCTTCCCTGCTCCCTGATGGTCAGGAGCCAGAGCCCGAGTCTGGCAAGGAGGACTCTGTGCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CCAGTGATGTGCACCAGCAGCAGTTCCGACATCTCCTaGGCCTTCCAGCCGATGGTCAGGGTGGAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: PVMCTSSSSDIS*AFQPMVRVEAL
Trigger: CAAGGCCTCCACCCTGACCATCGGCTGGAAGGCCCAGGAGATGTCGGAACTGCTGCTGGTGCACATCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp ACCAGCTTTTGCTGTGCGGCCATCCGGTGCTCTCTCTaGGCCTCCTCGAACTCCAGGTCCCTGTACACCTGC +
Preference number: 6 (lower is better)
Translates to: TSFCCAAIRCSL*ASSNSRSLYTC
Trigger: GCAGGTGTACAGGGACCTGGAGTTCGAGGAGGCCCAGAGAGAGCACCGGATGGCCGCACAGCAAAAGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GGAGGTTGTTCTCCTCGTCCCGCATGGCCATCAGCATaGCGCGCATCTGTGCGATCTGATCCAGTGCAGCCG +
Preference number: 6 (lower is better)
Translates to: GGCSPRPAWPSA*RASVRSDPVQP
Trigger: CGGCTGCACTGGATCAGATCGCACAGATGCGCGCCATGCTGATGGCCATGCGGGACGAGGAGAACAACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CTCTCCTCCCAGTCCCGGGTGATCTCCCACACTTGCTaGAGGGCATCGAGCTCCTTCTCCAGGATCTGGAGG +
Preference number: 6 (lower is better)
Translates to: LSSQSRVISHTC*RASSSFSRIWR
Trigger: CCTCCAGATCCTGGAGAAGGAGCTCGATGCCCTCCAGCAAGTGTGGGAGATCACCCGGGACTGGGAGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CCAGCTCTCCTCCCAGTCCCGGGTGATCTCCCACACTaGCTGGAGGGCATCGAGCTCCTTCTCCAGGATCTG +
Preference number: 6 (lower is better)
Translates to: PALLPVPGDLPH*LEGIELLLQDL
Trigger: CAGATCCTGGAGAAGGAGCTCGATGCCCTCCAGCAAGTGTGGGAGATCACCCGGGACTGGGAGGAGAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CACTCACCTGGCAGCATGGCCTTCTCCGGGGAAGAGTaGGTGTACCACAGGTGCCAGTCCCGAGGGTACTGC +
Preference number: 6 (lower is better)
Translates to: HSPGSMAFSGEE*VYHRCQSRGYC
Trigger: GCAGTACCCTCGGGACTGGCACCTGTGGTACACCAACTCTTCCCCGGAGAAGGCCATGCTGCCAGGTGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CGCAGGGAGCGGACGATCAGCATCCGCTGCATCTCATaGCACGCATTCTCCCACTCACCTGGCAGCATGGCC +
Preference number: 6 (lower is better)
Translates to: RRERTISIRCIS*HAFSHSPGSMA
Trigger: GGCCATGCTGCCAGGTGAGTGGGAGAATGCGTGCAATGAGATGCAGCGGATGCTGATCGTCCGCTCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CCACTGGTTCCAGCTCTCCTCCCAGTCCCGGGTGATCTCCCACACTaGCTGGAGGGCATCGAGCTCCTTCTCCAGGATCTGGAGGTCCTT +
Preference number: 6 (lower is better)
Translates to: PLVPALLPVPGDLPH*LEGIELLLQDLEVL
Trigger: AAGGACCTCCAGATCCTGGAGAAGGAGCTCGATGCCCTCCAGCAAGTGTGGGAGATCACCCGGGACTGGGAGGAGAGCTGGAACCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CTCTGGGCCTCCTCGAACTCCAGGTCCCTGTACACCTaGTTGCCAGTGATGTGCACCAGCAGCAGTTCCGAC +
Preference number: 6 (lower is better)
Translates to: LWASSNSRSLYT*LPVMCTSSSSD
Trigger: GTCGGAACTGCTGCTGGTGCACATCACTGGCAAGCAGGTGTACAGGGACCTGGAGTTCGAGGAGGCCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GGCGCAGGGCGTCCTCCATCATGTGATCCAGCCGTATaGTGTAGAGCAACCACTGCTGCTGAATCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: GAGRPPSCDPAV*CRATTAAESRG
Trigger: GCCCCGAGATTCAGCAGCAGTGGTTGCTCTACACCATACGGCTGGATCACATGATGGAGGACGCCCTGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp ACTCACCTGGCAGCATGGCCTTCTCCGGGGAAGAGTTaGTGTACCACAGGTGCCAGTCCCGAGGGTACTGCT +
Preference number: 6 (lower is better)
Translates to: THLAAWPSPGKS*CTTGASPEGTA
Trigger: AGCAGTACCCTCGGGACTGGCACCTGTGGTACACCAACTCTTCCCCGGAGAAGGCCATGCTGCCAGGTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCTCGGCTCTGGCCACCAACCCTGGTGGGTGTGATCTaGGGTTGCAGGGAAAGCAGGGTCTCAAAGAGGGTC +
Preference number: 6 (lower is better)
Translates to: SRLWPPTLVGVI*GCRESRVSKRV
Trigger: GACCCTCTTTGAGACCCTGCTTTCCCTGCAACCCCAGATCACACCCACCAGGGTTGGTGGCCAGAGCCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TGGCCCCTGGGCACCGAAGAAGCATGGAAGGGGACCTaGCTTGCCGTCTTCCCAACGGGCAAAGTGGTACTG +
Preference number: 6 (lower is better)
Translates to: WPLGTEEAWKGT*LAVFPTGKVVL
Trigger: CAGTACCACTTTGCCCGTTGGGAAGACGGCAAGCAAGGTCCCCTTCCATGCTTCTTCGGTGCCCAGGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS CAA 90 bp GAGACCGGCTGCTCGATCTTGAAGATGCCCAGATTGGAGCGGAGGTaGTTCTCCTCGTCCCGCATGGCCATCAGCATGGCGCGCATCTGT +
Preference number: 6 (lower is better)
Translates to: ETGCSILKMPRLERR*FSSSRMAISMARIC
Trigger: ACAGATGCGCGCCATGCTGATGGCCATGCGGGACGAGGAGAACAACCTCCGCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CACAGGGACGTCAGAGAGGCCTGCAGAATTTTCCAGGAGGTGGTCTaGCTGCTGCCGGTGCCACCCACAATCATGGTGGAGTGGCGAGAG +
Preference number: 6 (lower is better)
Translates to: HRDVREACRIFQEVV*LLPVPPTIMVEWRE
Trigger: CTCTCGCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTCCTGGAAAATTCTGCAGGCCTCTCTGACGTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GCATTCTCCCACTCACCTGGCAGCATGGCCTTCTCCGGGGAAGAGTaGGTGTACCACAGGTGCCAGTCCCGAGGGTACTGCTCAAAGGAG +
Preference number: 6 (lower is better)
Translates to: AFSHSPGSMAFSGEE*VYHRCQSRGYCSKE
Trigger: CTCCTTTGAGCAGTACCCTCGGGACTGGCACCTGTGGTACACCAACTCTTCCCCGGAGAAGGCCATGCTGCCAGGTGAGTGGGAGAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GCCAGCCTGTGGAAAGTGTCCAAGAGCAGCACTCCGTaGTCTACGTCCCGGACCAACTCAAAGGCCGAGGTA +
Preference number: 6 (lower is better)
Translates to: ASLWKVSKSSTP*STSRTNSKAEV
Trigger: TACCTCGGCCTTTGAGTTGGTCCGGGACGTAGAGCACGGAGTGCTGCTCTTGGACACTTTCCACAGGCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS GCA 72 bp AGTCTCGAGCAACAAGGAGCAGGTTCTCCCGGAGAATaGGCAGGTCCTCGGCGCGTTCAGCCACGTTCATCA +
Preference number: 6 (lower is better)
Translates to: SLEQQGAGSPGE*AGPRRVQPRSS
Trigger: TGATGAACGTGGCTGAACGCGCCGAGGACCTGCGCATTCTCCGGGAGAACCTGCTCCTTGTTGCTCGAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp AGGCCTGCAGAATTTTCCAGGAGGTGGTCTTGCTGCTaGCGGTGCCACCCACAATCATGGTGGAGTGGCGAG +
Preference number: 6 (lower is better)
Translates to: RPAEFSRRWSCC*RCHPQSWWSGE
Trigger: CTCGCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTCCTGGAAAATTCTGCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GAGAGGCCTGCAGAATTTTCCAGGAGGTGGTCTTGCTaGTGCCGGTGCCACCCACAATCATGGTGGAGTGGC +
Preference number: 6 (lower is better)
Translates to: ERPAEFSRRWSC*CRCHPQSWWSG
Trigger: GCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTCCTGGAAAATTCTGCAGGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CCAGATTGGAGCGGAGGTTGTTCTCCTCGTCCCGCATaGCCATCAGCATGGCGCGCATCTGTGCGATCTGAT +
Preference number: 6 (lower is better)
Translates to: PDWSGGCSPRPA*PSAWRASVRSD
Trigger: ATCAGATCGCACAGATGCGCGCCATGCTGATGGCCATGCGGGACGAGGAGAACAACCTCCGCTCCAATCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GTCTGTGCGGACATGTTGACGACGAGCACTGACCACTaGCTGGAGGGCAAGGACTGGAGAACACTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: VCADMLTTSTDH*LEGKDWRTLWA
Trigger: AGCCCAGAGTGTTCTCCAGTCCTTGCCCTCCAGCCAGTGGTCAGTGCTCGTCGTCAACATGTCCGCACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCTTCAAGGGCGGGCAATGCTTCCTCTAGATCCTTCTaGGCATTGTCGGCCAGCGCCTGGCACTTGACCTCC +
Preference number: 6 (lower is better)
Translates to: SSRAGNASSRSF*ALSASAWHLTS
Trigger: GGAGGTCAAGTGCCAGGCGCTGGCCGACAATGCCCAGAAGGATCTAGAGGAAGCATTGCCCGCCCTTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCTGGTCGCTCCTTCCGAACCACAATGCCCAGCAGCTaGGCTTCCAGGCCCTGCTCCTTTACAGCGAAGTTG +
Preference number: 6 (lower is better)
Translates to: SGRSFRTTMPSS*ASRPCSFTAKL
Trigger: CAACTTCGCTGTAAAGGAGCAGGGCCTGGAAGCCCAGCTGCTGGGCATTGTGGTTCGGAAGGAGCGACCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CGCCCAGCTGCCATCTCCTTGAGCAGGGTTGTGAACTaGTTCTGCCACTCGTTGCAGTGCTGCACCAGCGAG +
Preference number: 6 (lower is better)
Translates to: RPAAISLSRVVN*FCHSLQCCTSE
Trigger: CTCGCTGGTGCAGCACTGCAACGAGTGGCAGAACAAGTTCACAACCCTGCTCAAGGAGATGGCAGCTGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GAGTGCAGGTCCGCAAGGCGCCCAGCTGCCATCTCCTaGAGCAGGGTTGTGAACTTGTTCTGCCACTCGTTG +
Preference number: 6 (lower is better)
Translates to: ECRSARRPAAIS*SRVVNLFCHSL
Trigger: CAACGAGTGGCAGAACAAGTTCACAACCCTGCTCAAGGAGATGGCAGCTGGGCGCCTTGCGGACCTGCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TTGGAGACCGGCTGCTCGATCTTGAAGATGCCCAGATaGGAGCGGAGGTTGTTCTCCTCGTCCCGCATGGCC +
Preference number: 6 (lower is better)
Translates to: LETGCSILKMPR*ERRLFSSSRMA
Trigger: GGCCATGCGGGACGAGGAGAACAACCTCCGCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGTCTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TCCGACATCTCCTGGGCCTTCCAGCCGATGGTCAGGGTGGAGGCCTaGAAGTCGTTCACAATCATCTGCACCTTGCTGGCATGCATGCGG +
Preference number: 6 (lower is better)
Translates to: SDISWAFQPMVRVEA*KSFTIICTLLACMR
Trigger: CCGCATGCATGCCAGCAAGGTGCAGATGATTGTGAACGACTTCAAGGCCTCCACCCTGACCATCGGCTGGAAGGCCCAGGAGATGTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TCCGCAAGGCGCCCAGCTGCCATCTCCTTGAGCAGGGTTGTGAACTaGTTCTGCCACTCGTTGCAGTGCTGCACCAGCGAGAACTTGAGG +
Preference number: 6 (lower is better)
Translates to: SARRPAAISLSRVVN*FCHSLQCCTSENLR
Trigger: CCTCAAGTTCTCGCTGGTGCAGCACTGCAACGAGTGGCAGAACAAGTTCACAACCCTGCTCAAGGAGATGGCAGCTGGGCGCCTTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TGGAGGTCCTTGGAGACCGGCTGCTCGATCTTGAAGATGCCCAGATaGGAGCGGAGGTTGTTCTCCTCGTCCCGCATGGCCATCAGCATG +
Preference number: 6 (lower is better)
Translates to: WRSLETGCSILKMPR*ERRLFSSSRMAISM
Trigger: CATGCTGATGGCCATGCGGGACGAGGAGAACAACCTCCGCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGTCTCCAAGGACCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TCCTTCTCCAGGATCTGGAGGTCCTTGGAGACCGGCTGCTCGATCTaGAAGATGCCCAGATTGGAGCGGAGGTTGTTCTCCTCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: SFSRIWRSLETGCSI*KMPRLERRLFSSSR
Trigger: GCGGGACGAGGAGAACAACCTCCGCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCCTGGAGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp ACTTGCTGGAGGGCATCGAGCTCCTTCTCCAGGATCTGGAGGTCCTaGGAGACCGGCTGCTCGATCTTGAAGATGCCCAGATTGGAGCGG +
Preference number: 6 (lower is better)
Translates to: TCWRASSSFSRIWRS*ETGCSILKMPRLER
Trigger: CCGCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCCTGGAGAAGGAGCTCGATGCCCTCCAGCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TGTGATCTGTGGCCCCTGGGCACCGAAGAAGCATGGAAGGGGACCTaGCTTGCCGTCTTCCCAACGGGCAAAGTGGTACTGACATTCGCA +
Preference number: 6 (lower is better)
Translates to: CDLWPLGTEEAWKGT*LAVFPTGKVVLTFA
Trigger: TGCGAATGTCAGTACCACTTTGCCCGTTGGGAAGACGGCAAGCAAGGTCCCCTTCCATGCTTCTTCGGTGCCCAGGGGCCACAGATCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS CAA 90 bp CTGAAGGGGTCTCCCACGGGACTTAGACAGAGCACAATGTGCAGGTaGTTCCGCACGCGCTCGATGAGGTATGCAAAGAGGCTGTCCGAG +
Preference number: 6 (lower is better)
Translates to: LKGSPTGLRQSTMCR*FRTRSMRYAKRLSE
Trigger: CTCGGACAGCCTCTTTGCATACCTCATCGAGCGCGTGCGGAACAACCTGCACATTGTGCTCTGTCTAAGTCCCGTGGGAGACCCCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GCCAGCGCCTGGCACTTGACCTCCTCAATAGCGATCTTCTCACTATaGGCAGTGACGGCCTTCTGCTGCTCATCTGCTTCCCGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: ASAWHLTSSIAIFSL*AVTAFCCSSASRFC
Trigger: GCAGAAGCGGGAAGCAGATGAGCAGCAGAAGGCCGTCACTGCCAATAGTGAGAAGATCGCTATTGAGGAGGTCAAGTGCCAGGCGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GCTGAGCCACAGGCGGAAGGAAGGGTGAGGGTCCTCCACCTGCAGTaGCTCCACCAACTTGTCCAGATTAGGCATCCAAGACAGAGACAG +
Preference number: 6 (lower is better)
Translates to: AEPQAEGRVRVLHLQ*LHQLVQIRHPRQRQ
Trigger: CTGTCTCTGTCTTGGATGCCTAATCTGGACAAGTTGGTGGAGCAACTGCAGGTGGAGGACCCTCACCCTTCCTTCCGCCTGTGGCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CCTGCTCGATGGTGTCCCGTAGCTTGCCATAGTCAATaGCCGGGAGCTCGATGTTGGGGAAGAGGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: PARWCPVACHSQ*PGARCWGRGPA
Trigger: TGCAGGACCTCTTCCCCAACATCGAGCTCCCGGTCATTGACTATGGCAAGCTACGGGACACCATCGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp AGAACTGGTACATGGGGTCAATGCGGCCCATGTCATTaGGCACAAAGAACAGCACCGAGGCCCGCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: RTGTWGQCGPCH*AQRTAPRPAGH
Trigger: GTGCCCAGCGGGCCTCGGTGCTGTTCTTTGTGCTCAATGACATGGGCCGCATTGACCCCATGTACCAGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TGGCAAATGCCTGTAATCCCAGCACAGAGTCCTCCTTaGCAGACTCGGGCTCTGGCTCCTGACCATCAGGGA +
Preference number: 6 (lower is better)
Translates to: WQMPVIPAQSPP*QTRALAPDHQG
Trigger: TCCCTGATGGTCAGGAGCCAGAGCCCGAGTCTGGCAAGGAGGACTCTGTGCTGGGATTACAGGCATTTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TCCACAGACTCCTGGGCACTCAGCACTTCCTTGATCTaGCTCGTCCAGTGGATCATGGAGGTCTCTAGCCGC +
Preference number: 6 (lower is better)
Translates to: STDSWALSTSLI*LVQWIMEVSSR
Trigger: GCGGCTAGAGACCTCCATGATCCACTGGACGAGGCAGATCAAGGAAGTGCTGAGTGCCCAGGAGTCTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp AACTCCAGGTCCCTGTACACCTGCTTGCCAGTGATGTaGACCAGCAGCAGTTCCGACATCTCCTGGGCCTTC +
Preference number: 6 (lower is better)
Translates to: NSRSLYTCLPVM*TSSSSDISWAF
Trigger: GAAGGCCCAGGAGATGTCGGAACTGCTGCTGGTGCACATCACTGGCAAGCAGGTGTACAGGGACCTGGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CTTGAGGTAGGAGTGCAGGTCCGCAAGGCGCCCAGCTaGCATCTCCTTGAGCAGGGTTGTGAACTTGTTCTG +
Preference number: 6 (lower is better)
Translates to: LEVGVQVRKAPS*HLLEQGCELVL
Trigger: CAGAACAAGTTCACAACCCTGCTCAAGGAGATGGCAGCTGGGCGCCTTGCGGACCTGCACTCCTACCTCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TCCTTCTCCAGGATCTGGAGGTCCTTGGAGACCGGCTaGTCGATCTTGAAGATGCCCAGATTGGAGCGGAGG +
Preference number: 6 (lower is better)
Translates to: SFSRIWRSLETG*SILKMPRLERR
Trigger: CCTCCGCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCCTGGAGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TGGGCCTTTGGGGGAGCCCCCGCGATGAAGGTGCAGTaGCGTGGTCAATGTCATGTAACATCTGTCTGTCAG +
Preference number: 6 (lower is better)
Translates to: WAFGGAPAMKVQ*RGQCHVTSVCQ
Trigger: CTGACAGACAGATGTTACATGACATTGACCACGGCACTGCACCTTCATCGCGGGGGCTCCCCCAAAGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCAATGAAGATGGTGAGGGCAGGCACCGCAGGATCCTaGACAAAGTGCTCCAGAACCATGTCGTGCTCCCCC +
Preference number: 6 (lower is better)
Translates to: SMKMVRAGTAGS*TKCSRTMSCSP
Trigger: GGGGGAGCACGACATGGTTCTGGAGCACTTTGTCCAGGATCCTGCGGTGCCTGCCCTCACCATCTTCATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GGGAGGTGGCGGAAGACAGAGATGGTGGCAAAGAGGTaGCTGCCTATGTCATTGACCACACTCGCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: GRWRKTEMVAKR*LPMSLTTLARV
Trigger: GACTCTGGCGAGTGTGGTCAATGACATAGGCAGCCACCTCTTTGCCACCATCTCTGTCTTCCGCCACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp ACTTGCTGGAGGGCATCGAGCTCCTTCTCCAGGATCTaGAGGTCCTTGGAGACCGGCTGCTCGATCTTGAAG +
Preference number: 6 (lower is better)
Translates to: TCWRASSSFSRI*RSLETGCSILK
Trigger: CTTCAAGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCCTGGAGAAGGAGCTCGATGCCCTCCAGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GCATCTGCCAGCCAACTGGTACATGGATTGTCCATTTaGCCTTCACGATCCAGGACCACACCCCCACGCAGG +
Preference number: 6 (lower is better)
Translates to: ASASQLVHGLSI*PSRSRTTPPRR
Trigger: CCTGCGTGGGGGTGTGGTCCTGGATCGTGAAGGCCAAATGGACAATCCATGTACCAGTTGGCTGGCAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TGCTCGATCTTGAAGATGCCCAGATTGGAGCGGAGGTaGTTCTCCTCGTCCCGCATGGCCATCAGCATGGCG +
Preference number: 6 (lower is better)
Translates to: CSILKMPRLERR*FSSSRMAISMA
Trigger: CGCCATGCTGATGGCCATGCGGGACGAGGAGAACAACCTCCGCTCCAATCTGGGCATCTTCAAGATCGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp AGGGCATCGAGCTCCTTCTCCAGGATCTGGAGGTCCTaGGAGACCGGCTGCTCGATCTTGAAGATGCCCAGA +
Preference number: 6 (lower is better)
Translates to: RASSSFSRIWRS*ETGCSILKMPR
Trigger: TCTGGGCATCTTCAAGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCCTGGAGAAGGAGCTCGATGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GTCAGAGAGGCCTGCAGAATTTTCCAGGAGGTGGTCTaGCTGCTGCCGGTGCCACCCACAATCATGGTGGAG +
Preference number: 6 (lower is better)
Translates to: VREACRIFQEVV*LLPVPPTIMVE
Trigger: CTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTCCTGGAAAATTCTGCAGGCCTCTCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GGCATCTGCCAGCCAACTGGTACATGGATTGTCCATTaGGCCTTCACGATCCAGGACCACACCCCCACGCAG +
Preference number: 6 (lower is better)
Translates to: GICQPTGTWIVH*AFTIQDHTPTQ
Trigger: CTGCGTGGGGGTGTGGTCCTGGATCGTGAAGGCCAAATGGACAATCCATGTACCAGTTGGCTGGCAGATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GCAAATATGCTCGTCTGGTCCAGAACCCAGCCCCGATaGGAGAACTGGGTGTGCATCTGTACGGCACGCAGG +
Preference number: 6 (lower is better)
Translates to: ANMLVWSRTQPR*ENWVCICTARR
Trigger: CCTGCGTGCCGTACAGATGCACACCCAGTTCTCCAATCGGGGCTGGGTTCTGGACCAGACGAGCATATTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208777.2
CDS CAA 90 bp AAGTTCTCTCCGGTCTCCACAGACTCCTGGGCACTCAGCACTTCCTaGATCTGCCTCGTCCAGTGGATCATGGAGGTCTCTAGCCGCTGT +
Preference number: 6 (lower is better)
Translates to: KFSPVSTDSWALSTS*ICLVQWIMEVSSRC
Trigger: ACAGCGGCTAGAGACCTCCATGATCCACTGGACGAGGCAGATCAAGGAAGTGCTGAGTGCCCAGGAGTCTGTGGAGACCGGAGAGAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GTTGGTCATGATGTTCACCACATCTTGGTGCAGCTTCACCAGCTTTaGCTGTGCGGCCATCCGGTGCTCTCTCTGGGCCTCCTCGAACTC +
Preference number: 6 (lower is better)
Translates to: VGHDVHHILVQLHQL*LCGHPVLSLGLLEL
Trigger: GAGTTCGAGGAGGCCCAGAGAGAGCACCGGATGGCCGCACAGCAAAAGCTGGTGAAGCTGCACCAAGATGTGGTGAACATCATGACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TGGCGGAAGACAGAGATGGTGGCAAAGAGGTGGCTGCCTATGTCATaGACCACACTCGCCAGAGTCTGCAGAGTCGGGGAGAATTCCACC +
Preference number: 6 (lower is better)
Translates to: WRKTEMVAKRWLPMS*TTLARVCRVGENST
Trigger: GGTGGAATTCTCCCCGACTCTGCAGACTCTGGCGAGTGTGGTCAATGACATAGGCAGCCACCTCTTTGCCACCATCTCTGTCTTCCGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GCTTCCTCTAGATCCTTCTGGGCATTGTCGGCCAGCGCCTGGCACTaGACCTCCTCAATAGCGATCTTCTCACTATTGGCAGTGACGGCC +
Preference number: 6 (lower is better)
Translates to: ASSRSFWALSASAWH*TSSIAIFSLLAVTA
Trigger: GGCCGTCACTGCCAATAGTGAGAAGATCGCTATTGAGGAGGTCAAGTGCCAGGCGCTGGCCGACAATGCCCAGAAGGATCTAGAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GCTTCTTCAAGGGCGGGCAATGCTTCCTCTAGATCCTTCTGGGCATaGTCGGCCAGCGCCTGGCACTTGACCTCCTCAATAGCGATCTTC +
Preference number: 6 (lower is better)
Translates to: ASSRAGNASSRSFWA*SASAWHLTSSIAIF
Trigger: GAAGATCGCTATTGAGGAGGTCAAGTGCCAGGCGCTGGCCGACAATGCCCAGAAGGATCTAGAGGAAGCATTGCCCGCCCTTGAAGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CCACGTGGCATCTGCCAGTCCGGTCAACATCGTTCGTaGGAGGAAGAAGGGCTTCAGAGCAAGATCCCGAGT +
Preference number: 6 (lower is better)
Translates to: PRGICQSGQHRS*EEEGLQSKIPS
Trigger: ACTCGGGATCTTGCTCTGAAGCCCTTCTTCCTCTCACGAACGATGTTGACCGGACTGGCAGATGCCACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CAGAGATGGTGGCAAAGAGGTGGCTGCCTATGTCATTaGCCACACTCGCCAGAGTCTGCAGAGTCGGGGAGA +
Preference number: 6 (lower is better)
Translates to: QRWWQRGGCLCH*PHSPESAESGR
Trigger: TCTCCCCGACTCTGCAGACTCTGGCGAGTGTGGTCAATGACATAGGCAGCCACCTCTTTGCCACCATCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp GGATCTGGAGGTCCTTGGAGACCGGCTGCTCGATCTTaGAGATGCCCAGATTGGAGCGGAGGTTGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: GSGGPWRPAARS*RCPDWSGGCSP
Trigger: AGGAGAACAACCTCCGCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CCAGTGCCTCTCTCTGAGGGCTGGATTCCGCAGGTCTaGGATGAGGGGCATGGTCCTCTTGAACTGCTCTAT +
Preference number: 6 (lower is better)
Translates to: PVPLSEGWIPQV*DEGHGPLELLY
Trigger: ATAGAGCAGTTCAAGAGGACCATGCCCCTCATCTCAGACCTGCGGAATCCAGCCCTCAGAGAGAGGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp TCTGCACATTGTTTGACGTGGTCTGTGCGGACATGTTaGCGACGAGCACTGACCACTGGCTGGAGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: SAHCLTWSVRTC*RRALTTGWRAR
Trigger: CCTTGCCCTCCAGCCAGTGGTCAGTGCTCGTCGTCAACATGTCCGCACAGACCACGTCAAACAATGTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp ACGATGAAGGAAGTAACACAGAATGCCACTCGGTCCTaGCGCAGGGAGCGGACGATCAGCATCCGCTGCATC +
Preference number: 6 (lower is better)
Translates to: TMKEVTQNATRS*RRERTISIRCI
Trigger: GATGCAGCGGATGCTGATCGTCCGCTCCCTGCGTCAGGACCGAGTGGCATTCTGTGTTACTTCCTTCATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CCTGGGCACCGAAGAAGCATGGAAGGGGACCTTGCTTaGCGTCTTCCCAACGGGCAAAGTGGTACTGACATT +
Preference number: 6 (lower is better)
Translates to: PGHRRSMEGDLA*RLPNGQSGTDI
Trigger: AATGTCAGTACCACTTTGCCCGTTGGGAAGACGGCAAGCAAGGTCCCCTTCCATGCTTCTTCGGTGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS GCA 72 bp TGGCTGCCTATGTCATTGACCACACTCGCCAGAGTCTaGAGAGTCGGGGAGAATTCCACCTGTGACCCACCT +
Preference number: 6 (lower is better)
Translates to: WLPMSLTTLARV*RVGENSTCDPP
Trigger: AGGTGGGTCACAGGTGGAATTCTCCCCGACTCTGCAGACTCTGGCGAGTGTGGTCAATGACATAGGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GCAGAATTTTCCAGGAGGTGGTCTTGCTGCTGCCGGTaGCACCCACAATCATGGTGGAGTGGCGAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: AEFSRRWSCCCR*HPQSWWSGESS
Trigger: AGAACTCTCGCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAAGACCACCTCCTGGAAAATTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CACGTGGGCTCATTGCCTCGAAGAATCATGACTGCCTaGATTACAATTTCCACCTGCGCAGGGGGTCGTCCG +
Preference number: 6 (lower is better)
Translates to: HVGSLPRRIMTA*ITISTCAGGRP
Trigger: CGGACGACCCCCTGCGCAGGTGGAAATTGTAATGCAGGCAGTCATGATTCTTCGAGGCAATGAGCCCACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp ATGGCCTTCTCCGGGGAAGAGTTGGTGTACCACAGGTaGCAGTCCCGAGGGTACTGCTCAAAGGAGTTCATG +
Preference number: 6 (lower is better)
Translates to: MAFSGEELVYHR*QSRGYCSKEFM
Trigger: CATGAACTCCTTTGAGCAGTACCCTCGGGACTGGCACCTGTGGTACACCAACTCTTCCCCGGAGAAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GCCAAGGTTGGACACGATGAAGGAAGTAACACAGAATaGCACTCGGTCCTGACGCAGGGAGCGGACGATCAG +
Preference number: 6 (lower is better)
Translates to: AKVGHDEGSNTE*HSVLTQGADDQ
Trigger: CTGATCGTCCGCTCCCTGCGTCAGGACCGAGTGGCATTCTGTGTTACTTCCTTCATCGTGTCCAACCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CTGTCCACTGAGATGTTGTTTTGGCGAGCGGCAGACTaGAGTACCGCAGTGAGGAAGCCAGTGGGGAAAGTG +
Preference number: 6 (lower is better)
Translates to: LSTEMLFWRAAD*STAVRKPVGKV
Trigger: CACTTTCCCCACTGGCTTCCTCACTGCGGTACTGCAGTCTGCCGCTCGCCAAAACAACATCTCAGTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GGAGTACATGCCCTTGGCACTTTTCTTTCGGCTCTCTaGTGGACGGAAGTGGATCGTGGGCATGAGGCAGAC +
Preference number: 6 (lower is better)
Translates to: GVHALGTFLSAL*WTEVDRGHEAD
Trigger: GTCTGCCTCATGCCCACGATCCACTTCCGTCCAGCAGAGAGCCGAAAGAAAAGTGCCAAGGGCATGTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TGGGCACTCAGCACTTCCTTGATCTGCCTCGTCCAGTaGATCATGGAGGTCTCTAGCCGCTGTACCAGCTCT +
Preference number: 6 (lower is better)
Translates to: WALSTSLICLVQ*IMEVSSRCTSS
Trigger: AGAGCTGGTACAGCGGCTAGAGACCTCCATGATCCACTGGACGAGGCAGATCAAGGAAGTGCTGAGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp AAAGGGCCTAAGTTCTCTCCGGTCTCCACAGACTCCTaGGCACTCAGCACTTCCTTGATCTGCCTCGTCCAG +
Preference number: 6 (lower is better)
Translates to: KGPKFSPVSTDS*ALSTSLICLVQ
Trigger: CTGGACGAGGCAGATCAAGGAAGTGCTGAGTGCCCAGGAGTCTGTGGAGACCGGAGAGAACTTAGGCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp AGCAGGCTCGCATTGTTAGTCATGCCACTGCTGATCTaGGCCTGGATCTTCCTGATGTCCTCGTCTCGCTCC +
Preference number: 6 (lower is better)
Translates to: SRLALLVMPLLI*AWIFLMSSSRS
Trigger: GGAGCGAGACGAGGACATCAGGAAGATCCAGGCCCAGATCAGCAGTGGCATGACTAACAATGCGAGCCTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp ACGACGAGCACTGACCACTGGCTGGAGGGCAAGGACTaGAGAACACTCTGGGCTATGGAGGTCTTTCCAGTT +
Preference number: 6 (lower is better)
Translates to: TTSTDHWLEGKD*RTLWAMEVFPV
Trigger: AACTGGAAAGACCTCCATAGCCCAGAGTGTTCTCCAGTCCTTGCCCTCCAGCCAGTGGTCAGTGCTCGTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GGTCATGTTGATAATGTTGAAGCGACTCTGCAGCCTTaGGGAGATAACAGTCCGTCCACCCCCAGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: GHVDNVEATLQP*GDNSPSTPRRA
Trigger: GGCCCTCCTGGGGGTGGACGGACTGTTATCTCCCCAAGGCTGCAGAGTCGCTTCAACATTATCAACATGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GTACATGCCCTTGGCACTTTTCTTTCGGCTCTCTGCTaGACGGAAGTGGATCGTGGGCATGAGGCAGACCAG +
Preference number: 6 (lower is better)
Translates to: VHALGTFLSALC*TEVDRGHEADQ
Trigger: CTGGTCTGCCTCATGCCCACGATCCACTTCCGTCCAGCAGAGAGCCGAAAGAAAAGTGCCAAGGGCATGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CAAATATGCTCGTCTGGTCCAGAACCCAGCCCCGATTaGAGAACTGGGTGTGCATCTGTACGGCACGCAGGT +
Preference number: 6 (lower is better)
Translates to: QICSSGPEPSPD*RTGCASVRHAG
Trigger: ACCTGCGTGCCGTACAGATGCACACCCAGTTCTCCAATCGGGGCTGGGTTCTGGACCAGACGAGCATATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208777.2
CDS CAA 72 bp ACAGAGATGGTGGCAAAGAGGTGGCTGCCTATGTCATaGACCACACTCGCCAGAGTCTGCAGAGTCGGGGAG +
Preference number: 6 (lower is better)
Translates to: TEMVAKRWLPMS*TTLARVCRVGE
Trigger: CTCCCCGACTCTGCAGACTCTGGCGAGTGTGGTCAATGACATAGGCAGCCACCTCTTTGCCACCATCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp AGGATCTGGAGGTCCTTGGAGACCGGCTGCTCGATCTaGAAGATGCCCAGATTGGAGCGGAGGTTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: RIWRSLETGCSI*KMPRLERRLFS
Trigger: GGAGAACAACCTCCGCTCCAATCTGGGCATCTTCAAGATCGAGCAGCCGGTCTCCAAGGACCTCCAGATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CTCTGCACATTGTTTGACGTGGTCTGTGCGGACATGTaGACGACGAGCACTGACCACTGGCTGGAGGGCAAG +
Preference number: 6 (lower is better)
Translates to: LCTLFDVVCADM*TTSTDHWLEGK
Trigger: CTTGCCCTCCAGCCAGTGGTCAGTGCTCGTCGTCAACATGTCCGCACAGACCACGTCAAACAATGTGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GTCTCCAGTTGCTCGGTCACCTCGGTGGCCGTTATCTaGGATGTCTGGAGGGTATTCACCAGCTGCACGTCA +
Preference number: 6 (lower is better)
Translates to: VSSCSVTSVAVI*DVWRVFTSCTS
Trigger: TGACGTGCAGCTGGTGAATACCCTCCAGACATCCAAGATAACGGCCACCGAGGTGACCGAGCAACTGGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TCACGATCCAGGACCACACCCCCACGCAGGAAGAAGTaGTACTCATCCATGTTGAGCTTGCCGGACGTCTCC +
Preference number: 6 (lower is better)
Translates to: SRSRTTPPRRKK*YSSMLSLPDVS
Trigger: GGAGACGTCCGGCAAGCTCAACATGGATGAGTACAACTTCTTCCTGCGTGGGGGTGTGGTCCTGGATCGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CAGGCGGAAGGAAGGGTGAGGGTCCTCCACCTGCAGTaGCTCCACCAACTTGTCCAGATTAGGCATCCAAGA +
Preference number: 6 (lower is better)
Translates to: QAEGRVRVLHLQ*LHQLVQIRHPR
Trigger: TCTTGGATGCCTAATCTGGACAAGTTGGTGGAGCAACTGCAGGTGGAGGACCCTCACCCTTCCTTCCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp ACAAGGACCCTGAAGAGCGGGTTTGGAGTGGTCTTTCCATCCCCGTaGATGGCCTTGGAAAGCTCCAGCAGTGACCACTTCACGTTCAGG +
Preference number: 6 (lower is better)
Translates to: TRTLKSGFGVVFPSP*MALESSSSDHFTFR
Trigger: CCTGAACGTGAAGTGGTCACTGCTGGAGCTTTCCAAGGCCATCAACGGGGATGGAAAGACCACTCCAAACCCGCTCTTCAGGGTCCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GTCTCACTGGTCTCCAGTTGCTCGGTCACCTCGGTGGCCGTTATCTaGGATGTCTGGAGGGTATTCACCAGCTGCACGTCATCAAGCAGA +
Preference number: 6 (lower is better)
Translates to: VSLVSSCSVTSVAVI*DVWRVFTSCTSSSR
Trigger: TCTGCTTGATGACGTGCAGCTGGTGAATACCCTCCAGACATCCAAGATAACGGCCACCGAGGTGACCGAGCAACTGGAGACCAGTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TCGGGCCAAGTCAATGTTGATCTCTGTGGTCTCACTGGTCTCCAGTaGCTCGGTCACCTCGGTGGCCGTTATCTTGGATGTCTGGAGGGT +
Preference number: 6 (lower is better)
Translates to: SGQVNVDLCGLTGLQ*LGHLGGRYLGCLEG
Trigger: ACCCTCCAGACATCCAAGATAACGGCCACCGAGGTGACCGAGCAACTGGAGACCAGTGAGACCACAGAGATCAACATTGACTTGGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CACTCGTTGCAGTGCTGCACCAGCGAGAACTTGAGGTaGGAGCAGTCCAGCATCACGAACTGGATGTTGAGG +
Preference number: 6 (lower is better)
Translates to: HSLQCCTSENLR*EQSSITNWMLR
Trigger: CCTCAACATCCAGTTCGTGATGCTGGACTGCTCTCACCTCAAGTTCTCGCTGGTGCAGCACTGCAACGAGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp TCTGCCACTCGTTGCAGTGCTGCACCAGCGAGAACTTaGGGTGAGAGCAGTCCAGCATCACGAACTGGATGT +
Preference number: 6 (lower is better)
Translates to: SATRCSAAPART*GESSPASRTGC
Trigger: ACATCCAGTTCGTGATGCTGGACTGCTCTCACCTCAAGTTCTCGCTGGTGCAGCACTGCAACGAGTGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp ATCAGGCACTTGGTGACATCAGCTGTCCACTGGATCTaGCTAGCAGTGATCACCACCTGGCCAGCCCAGTCT +
Preference number: 6 (lower is better)
Translates to: IRHLVTSAVHWI*LAVITTWPAQS
Trigger: AGACTGGGCTGGCCAGGTGGTGATCACTGCTAGTCAGATCCAGTGGACAGCTGATGTCACCAAGTGCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp GTGTGGCCAGGACTGTGTAGAGCTTACAGAGGGAGATaGTCCCACTGTACTCGGGGACAGGTACCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: VWPGLCRAYRGR*SHCTRGQVPAH
Trigger: ATGAGCTGGTACCTGTCCCCGAGTACAGTGGGATCATCTCCCTCTGTAAGCTCTACACAGTCCTGGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CTTCTGCCCACGTGGGCTCATTGCCTCGAAGAATCATaGCTGCCTGCATTACAATTTCCACCTGCGCAGGGG +
Preference number: 6 (lower is better)
Translates to: LLPTWAHCLEES*LPALQFPPAQG
Trigger: CCCCTGCGCAGGTGGAAATTGTAATGCAGGCAGTCATGATTCTTCGAGGCAATGAGCCCACGTGGGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CACCCCCACGCAGGAAGAAGTTGTACTCATCCATGTTaGGCTTGCCGGACGTCTCCAGGATTTTGGCGCACA +
Preference number: 6 (lower is better)
Translates to: HPHAGRSCTHPC*ACRTSPGFWRT
Trigger: TGTGCGCCAAAATCCTGGAGACGTCCGGCAAGCTCAACATGGATGAGTACAACTTCTTCCTGCGTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CAGATGTCATGGATCCAGATCGGAGATCGATGCCTATaGCAAAGGAGGCTCGATCTGTGCTGCCTGCCCGGT +
Preference number: 6 (lower is better)
Translates to: QMSWIQIGDRCL*QRRLDLCCLPG
Trigger: ACCGGGCAGGCAGCACAGATCGAGCCTCCTTTGTCATAGGCATCGATCTCCGATCTGGATCCATGACATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp AGCCCTCGATTTCTCGAAGGTAGCTGTCAATCTTCTTaGGTCCGTCCTCGTCCACAGAGGCACACACAGACC +
Preference number: 6 (lower is better)
Translates to: SPRFLEGSCQSS*VRPRPQRHTQT
Trigger: GGTCTGTGTGTGCCTCTGTGGACGAGGACGGACGCAAGAAGATTGACAGCTACCTTCGAGAAATCGAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GGGCCCATGGCAGCCATCAGGAACATGTCTCGGATGTaGTTGATGCTCTGCTTCACACGATCGTACCAGAAG +
Preference number: 6 (lower is better)
Translates to: GPMAAIRNMSRM*LMLCFTRSYQK
Trigger: CTTCTGGTACGATCGTGTGAAGCAGAGCATCAAGCACATCCGAGACATGTTCCTGATGGCTGCCATGGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GTGACGGCCTTCTGCTGCTCATCTGCTTCCCGCTTCTaGTGCACAATGATGACCAGGTATTCTTCGCACTGC +
Preference number: 6 (lower is better)
Translates to: VTAFCCSSASRF*CTMMTRYSSHC
Trigger: GCAGTGCGAAGAATACCTGGTCATCATTGTGCAGCAGAAGCGGGAAGCAGATGAGCAGCAGAAGGCCGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GGTCAGAAAGGGTCCCATGTAGGACAAGAACGCAGCTaGAATCAGACAGTCGCCCACCAGGTAACCCAGATC +
Preference number: 6 (lower is better)
Translates to: GQKGSHVGQERS*NQTVAHQVTQI
Trigger: GATCTGGGTTACCTGGTGGGCGACTGTCTGATTGCAGCTGCGTTCTTGTCCTACATGGGACCCTTTCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TTTCCTGCAGCGATGTTGATGACCAGAGAGTCCTTCTaGTCCTCCAGCTCTGGTCGCTCCTTCCGAACCACA +
Preference number: 6 (lower is better)
Translates to: FPAAMLMTRESF*SSSSGRSFRTT
Trigger: TGTGGTTCGGAAGGAGCGACCAGAGCTGGAGGAGCAGAAGGACTCTCTGGTCATCAACATCGCTGCAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GAGTTGGTGTACCACAGGTGCCAGTCCCGAGGGTACTaGTCAAAGGAGTTCATGAGCCCATGGAAGTTGGTC +
Preference number: 6 (lower is better)
Translates to: ELVYHRCQSRGY*SKEFMSPWKLV
Trigger: GACCAACTTCCATGGGCTCATGAACTCCTTTGAGCAGTACCCTCGGGACTGGCACCTGTGGTACACCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GGACGGAAGTGGATCGTGGGCATGAGGCAGACCAGCTaGATGGGCTCCGCCTCCACTAAACAAGAATTCTTT +
Preference number: 6 (lower is better)
Translates to: GRKWIVGMRQTS*MGSASTKQEFF
Trigger: AAAGAATTCTTGTTTAGTGGAGGCGGAGCCCATGCAGCTGGTCTGCCTCATGCCCACGATCCACTTCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp ATGCTCTCCTCGCCAGTCCCAATATGGGGCAGGAAGTaGGCTCCGGAAAGGCAGTTCATGACTCTGTCTATG +
Preference number: 6 (lower is better)
Translates to: MLSSPVPIWGRK*APERQFMTLSM
Trigger: CATAGACAGAGTCATGAACTGCCTTTCCGGAGCCCACTTCCTGCCCCATATTGGGACTGGCGAGGAGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TGCTCGGTCACCTCGGTGGCCGTTATCTTGGATGTCTaGAGGGTATTCACCAGCTGCACGTCATCAAGCAGA +
Preference number: 6 (lower is better)
Translates to: CSVTSVAVILDV*RVFTSCTSSSR
Trigger: TCTGCTTGATGACGTGCAGCTGGTGAATACCCTCCAGACATCCAAGATAACGGCCACCGAGGTGACCGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCTCCAGTTGCTCGGTCACCTCGGTGGCCGTTATCTTaGATGTCTGGAGGGTATTCACCAGCTGCACGTCAT +
Preference number: 6 (lower is better)
Translates to: SPVARSPRWPLS*MSGGYSPAARH
Trigger: ATGACGTGCAGCTGGTGAATACCCTCCAGACATCCAAGATAACGGCCACCGAGGTGACCGAGCAACTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CCTCAGGATGGACAAGAAAGTCAGGTTGGACTGAGCTaGTCGAGAGCCATCCTGGATCTGCTGGGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: PQDGQESQVGLS*SRAILDLLGQL
Trigger: AAGCTGGCCCAGCAGATCCAGGATGGCTCTCGACAAGCTCAGTCCAACCTGACTTTCTTGTCCATCCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CTGAAGAGCGGGTTTGGAGTGGTCTTTCCATCCCCGTaGATGGCCTTGGAAAGCTCCAGCAGTGACCACTTC +
Preference number: 6 (lower is better)
Translates to: LKSGFGVVFPSP*MALESSSSDHF
Trigger: GAAGTGGTCACTGCTGGAGCTTTCCAAGGCCATCAACGGGGATGGAAAGACCACTCCAAACCCGCTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TGCTGCACAGCCAGTGAGTACAGTGTGTACACCTTCTaGGCCAGGATCTTGCAGTTGCCAAAGCCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: CCTASEYSVYTF*ARILQLPKPSP
Trigger: TGGGGAGGGCTTTGGCAACTGCAAGATCCTGGCCAAGAAGGTGTACACACTGTACTCACTGGCTGTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp ACACCCCCACGCAGGAAGAAGTTGTACTCATCCATGTaGAGCTTGCCGGACGTCTCCAGGATTTTGGCGCAC +
Preference number: 6 (lower is better)
Translates to: TPPRRKKLYSSM*SLPDVSRILAH
Trigger: GTGCGCCAAAATCCTGGAGACGTCCGGCAAGCTCAACATGGATGAGTACAACTTCTTCCTGCGTGGGGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TTCAGTCCAGGGTGGATCTTCTTATCCAGGAACCGGATCCGCTCTTaGAACAGGGCCTGCTCGTCTGGGGACAGCATGGCAATAATCCTG +
Preference number: 6 (lower is better)
Translates to: FSPGWIFLSRNRIRS*NRACSSGDSMAIIL
Trigger: CAGGATTATTGCCATGCTGTCCCCAGACGAGCAGGCCCTGTTCAAAGAGCGGATCCGGTTCCTGGATAAGAAGATCCACCCTGGACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CAGGCAACCCGCATGACACTAGACAGGATGCCATCGGTCCATTCGTaGGTGTTGAGGTCATACTCGCCATACAGCTCCCCTAAGGACAGT +
Preference number: 6 (lower is better)
Translates to: QATRMTLDRMPSVHS*VLRSYSPYSSPKDS
Trigger: ACTGTCCTTAGGGGAGCTGTATGGCGAGTATGACCTCAACACCAACGAATGGACCGATGGCATCCTGTCTAGTGTCATGCGGGTTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp ATCCCAGTAGGCATCTGCCAGCCAACTGGTACATGGATTGTCCATTaGGCCTTCACGATCCAGGACCACACCCCCACGCAGGAAGAAGTT +
Preference number: 6 (lower is better)
Translates to: IPVGICQPTGTWIVH*AFTIQDHTPTQEEV
Trigger: AACTTCTTCCTGCGTGGGGGTGTGGTCCTGGATCGTGAAGGCCAAATGGACAATCCATGTACCAGTTGGCTGGCAGATGCCTACTGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp ATGGGAACTGGGGCTTGTCGAATGAAGTACACAATCTaGTTCTGCGTCTGCACAGGCATGCCCAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: MGTGACRMKYTI*FCVCTGMPSSS
Trigger: GCTGGAGCTGGGCATGCCTGTGCAGACGCAGAATCAGATTGTGTACTTCATTCGACAAGCCCCAGTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CGAAGGATCCGCACCCAGTGGGCCTGTCCAGAGTACTaGGTCATGTATGGCTCCAGATATGGCCATTTCTTG +
Preference number: 6 (lower is better)
Translates to: RRIRTQWACPEY*VMYGSRYGHFL
Trigger: CAAGAAATGGCCATATCTGGAGCCATACATGACTCAGTACTCTGGACAGGCCCACTGGGTGCGGATCCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp GTAGTGGTCCTGTCTGGAGAGCTGCTGCACAGCCAGTaGGTACAGTGTGTACACCTTCTTGGCCAGGATCTT +
Preference number: 6 (lower is better)
Translates to: VVVLSGELLHSQ*VQCVHLLGQDL
Trigger: AAGATCCTGGCCAAGAAGGTGTACACACTGTACTCACTGGCTGTGCAGCAGCTCTCCAGACAGGACCACTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CCATGGCAGCCATCAGGAACATGTCTCGGATGTGCTTaGTGCTCTGCTTCACACGATCGTACCAGAAGCCGT +
Preference number: 6 (lower is better)
Translates to: PWQPSGTCLGCA*CSASHDRTRSR
Trigger: ACGGCTTCTGGTACGATCGTGTGAAGCAGAGCATCAAGCACATCCGAGACATGTTCCTGATGGCTGCCATGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp AGAGCACAATGTGCAGGTTGTTCCGCACGCGCTCGATaGGGTATGCAAAGAGGCTGTCCGAGGATTCTGGTA +
Preference number: 6 (lower is better)
Translates to: RAQCAGCSARAR*GMQRGCPRILV
Trigger: TACCAGAATCCTCGGACAGCCTCTTTGCATACCTCATCGAGCGCGTGCGGAACAACCTGCACATTGTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CTAGCAAGGCCTCTCGGGGCCACTCTGAGAACCAGTTaGTGGTTGTACAGTTTACTAAGGCTGGGTACTGGC +
Preference number: 6 (lower is better)
Translates to: LARPLGATLRTS*WLYSLLRLGTG
Trigger: GCCAGTACCCAGCCTTAGTAAACTGTACAACCATCAACTGGTTCTCAGAGTGGCCCCGAGAGGCCTTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp GGTGCCAGTCCCGAGGGTACTGCTCAAAGGAGTTCATaGGCCCATGGAAGTTGGTCAGTTTGTCCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: GASPEGTAQRSS*AHGSWSVCPVL
Trigger: CAGAACTGGACAAACTGACCAACTTCCATGGGCTCATGAACTCCTTTGAGCAGTACCCTCGGGACTGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TGCTTGCTGATGCTGGACAGGTCCATGCAGCGATTGTaGCAGAACTCGATCTCCTCCAAAGGGCCTAAGTTC +
Preference number: 6 (lower is better)
Translates to: CLLMLDRSMQRL*QNSISSKGPKF
Trigger: GAACTTAGGCCCTTTGGAGGAGATCGAGTTCTGGCACAATCGCTGCATGGACCTGTCCAGCATCAGCAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CTCACTATTGGCAGTGACGGCCTTCTGCTGCTCATCTaGTTCCCGCTTCTGCTGCACAATGATGACCAGGTA +
Preference number: 6 (lower is better)
Translates to: LTIGSDGLLLLI*FPLLLHNDDQV
Trigger: TACCTGGTCATCATTGTGCAGCAGAAGCGGGAAGCAGATGAGCAGCAGAAGGCCGTCACTGCCAATAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TGCAGCGCTGCACAAAGGCATCTACTTGAGCAAATATaGTCGTCTGGTCCAGAACCCAGCCCCGATTGGAGA +
Preference number: 6 (lower is better)
Translates to: CSAAQRHLLEQI*SSGPEPSPDWR
Trigger: TCTCCAATCGGGGCTGGGTTCTGGACCAGACGAGCATATTTGCTCAAGTAGATGCCTTTGTGCAGCGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208777.2
CDS CCA 72 bp TCGATTTCTAGCAAGTTTCGTGTGATCTGTGGCCCCTaGGCACCGAAGAAGCATGGAAGGGGACCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: SISSKFRVICGP*APKKHGRGPCL
Trigger: CAAGCAAGGTCCCCTTCCATGCTTCTTCGGTGCCCAGGGGCCACAGATCACACGAAACTTGCTAGAAATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS CCA 72 bp CACCCAGTGGGCCTGTCCAGAGTACTGAGTCATGTATaGCTCCAGATATGGCCATTTCTTGTTCAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: HPVGLSRVLSHV*LQIWPFLVQLP
Trigger: CGGGAGCTGAACAAGAAATGGCCATATCTGGAGCCATACATGACTCAGTACTCTGGACAGGCCCACTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GAACCGGATCCGCTCTTTGAACAGGGCCTGCTCGTCTaGGGACAGCATGGCAATAATCCTGTTATAGTCTCG +
Preference number: 6 (lower is better)
Translates to: EPDPLFEQGLLV*GQHGNNPVIVS
Trigger: CGAGACTATAACAGGATTATTGCCATGCTGTCCCCAGACGAGCAGGCCCTGTTCAAAGAGCGGATCCGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CTCGCATTGTTAGTCATGCCACTGCTGATCTGGGCCTaGATCTTCCTGATGTCCTCGTCTCGCTCCACAAGT +
Preference number: 6 (lower is better)
Translates to: LALLVMPLLIWA*IFLMSSSRSTS
Trigger: ACTTGTGGAGCGAGACGAGGACATCAGGAAGATCCAGGCCCAGATCAGCAGTGGCATGACTAACAATGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TTCTTCAGCATCTGCTCGCTATCCAGCAGGATTTGTTaGAAGGTGAGCCACTCCCCATTGAGGCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: FFSICSLSSRIC*KVSHSPLRLSS
Trigger: GCTGGAGAGCCTCAATGGGGAGTGGCTCACCTTCCAACAAATCCTGCTGGATAGCGAGCAGATGCTGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CAGCAGTTTGATGTTGTCAAAGCACTTTTTGAGGTGTaGCTGCACAGCCTCTGGGTTACGGGACTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: QQFDVVKALFEV*LHSLWVTGLAQ
Trigger: CTGGGCCAGTCCCGTAACCCAGAGGCTGTGCAGCCACACCTCAAAAAGTGCTTTGACAACATCAAACTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GTCCACGGGGCCATCAAAAAGGATCCATTTCTCGTCTaGCTTCTCATCTGCACAGGCAACCCGCATGACACT +
Preference number: 6 (lower is better)
Translates to: VHGAIKKDPFLV*LLICTGNPHDT
Trigger: AGTGTCATGCGGGTTGCCTGTGCAGATGAGAAGCCAGACGAGAAATGGATCCTTTTTGATGGCCCCGTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TATAGAAAGGGGCGTTGGGAGGATAACGCCAGCTCTTaGGGAGCTTCTCCTCAAATGACGTCCAAGTCCGCA +
Preference number: 6 (lower is better)
Translates to: YRKGRWEDNASS*GASPQMTSKSA
Trigger: TGCGGACTTGGACGTCATTTGAGGAGAAGCTCCCCAAGAGCTGGCGTTATCCTCCCAACGCCCCTTTCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GGAAGCGCTGTACCACCGTATTGTAAACGTCCAGGGTaGCCTCTGTTACCACATTCCCAATGGGCTTCACCT +
Preference number: 6 (lower is better)
Translates to: GSAVPPYCKRPG*PLLPHSQWASP
Trigger: AGGTGAAGCCCATTGGGAATGTGGTAACAGAGGCCACCCTGGACGTTTACAATACGGTGGTACAGCGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CGTCAGCTATCTGGGTGTCCACGAAAAGGAAAGACGTaGTCTGGAGTTCTACCCCTGCCTGTCGATACAAGC +
Preference number: 6 (lower is better)
Translates to: RQLSGCPRKGKT*SGVLPLPVDTS
Trigger: GCTTGTATCGACAGGCAGGGGTAGAACTCCAGACCACGTCTTTCCTTTTCGTGGACACCCAGATAGCTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCCTCTAGATCCTTCTGGGCATTGTCGGCCAGCGCCTaGCACTTGACCTCCTCAATAGCGATCTTCTCACTA +
Preference number: 6 (lower is better)
Translates to: SSRSFWALSASA*HLTSSIAIFSL
Trigger: TAGTGAGAAGATCGCTATTGAGGAGGTCAAGTGCCAGGCGCTGGCCGACAATGCCCAGAAGGATCTAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp AGGTACTCGATGCGGTCCTCCAGCTTATTGCTGCGGTaGCTCTTGTCAATGCTGAGGATAAAGAGGCCGATG +
Preference number: 6 (lower is better)
Translates to: RYSMRSSSLLLR*LLSMLRIKRPM
Trigger: CATCGGCCTCTTTATCCTCAGCATTGACAAGAGCCACCGCAGCAATAAGCTGGAGGACCGCATCGAGTACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GACTCGATGTGTTTCACACCCTTCTTCACCAGCTGCTaGCTGATGCTGGACAGGTCCATGCAGCGATTGTGC +
Preference number: 6 (lower is better)
Translates to: DSMCFTPFFTSC*LMLDRSMQRLC
Trigger: GCACAATCGCTGCATGGACCTGTCCAGCATCAGCAAGCAGCTGGTGAAGAAGGGTGTGAAACACATCGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TGGCCAGCCCAGTCTTTCACCCATTTGTCTCTCTTGTaGAGGAACTTCTTGAGGGCCACGCGGCAGTTTCGA +
Preference number: 6 (lower is better)
Translates to: WPAQSFTHLSLL*RNFLRATRQFR
Trigger: TCGAAACTGCCGCGTGGCCCTCAAGAAGTTCCTCAACAAGAGAGACAAATGGGTGAAAGACTGGGCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CGCATGACACTAGACAGGATGCCATCGGTCCATTCGTaGGTGTTGAGGTCATACTCGCCATACAGCTCCCCT +
Preference number: 6 (lower is better)
Translates to: RMTLDRMPSVHS*VLRSYSPYSSP
Trigger: AGGGGAGCTGTATGGCGAGTATGACCTCAACACCAACGAATGGACCGATGGCATCCTGTCTAGTGTCATGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp AGATCCTTCTGGGCATTGTCGGCCAGCGCCTGGCACTaGACCTCCTCAATAGCGATCTTCTCACTATTGGCA +
Preference number: 6 (lower is better)
Translates to: RSFWALSASAWH*TSSIAIFSLLA
Trigger: TGCCAATAGTGAGAAGATCGCTATTGAGGAGGTCAAGTGCCAGGCGCTGGCCGACAATGCCCAGAAGGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp AACAGGATGGACTCGATGTGTTTCACACCCTTCTTCACCAGCTGCTaGCTGATGCTGGACAGGTCCATGCAGCGATTGTGCCAGAACTCG +
Preference number: 6 (lower is better)
Translates to: NRMDSMCFTPFFTSC*LMLDRSMQRLCQNS
Trigger: CGAGTTCTGGCACAATCGCTGCATGGACCTGTCCAGCATCAGCAAGCAGCTGGTGAAGAAGGGTGTGAAACACATCGAGTCCATCCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CTCCTTGTGTTTCTTCAGCATCTGCTCGCTATCCAGCAGGATTTGTaGGAAGGTGAGCCACTCCCCATTGAGGCTCTCCAGCATCTCCAG +
Preference number: 6 (lower is better)
Translates to: LLVFLQHLLAIQQDL*EGEPLPIEALQHLQ
Trigger: CTGGAGATGCTGGAGAGCCTCAATGGGGAGTGGCTCACCTTCCAACAAATCCTGCTGGATAGCGAGCAGATGCTGAAGAAACACAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CCAGCCCAGTCTTTCACCCATTTGTCTCTCTTGTTGAGGAACTTCTaGAGGGCCACGCGGCAGTTTCGAAGCAAATCCCGAAGGGTCATC +
Preference number: 6 (lower is better)
Translates to: PAQSFTHLSLLLRNF*RATRQFRSKSRRVI
Trigger: GATGACCCTTCGGGATTTGCTTCGAAACTGCCGCGTGGCCCTCAAGAAGTTCCTCAACAAGAGAGACAAATGGGTGAAAGACTGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CTGCTGCCGGTGCCACCCACAATCATGGTGGAGTGGCGAGAGTTCTaGGTTTCGTACAACTGTAAAACCTTGGTGAGGGTAAAGGGTGTG +
Preference number: 6 (lower is better)
Translates to: LLPVPPTIMVEWREF*VSYNCKTLVRVKGV
Trigger: CACACCCTTTACCCTCACCAAGGTTTTACAGTTGTACGAAACCAAGAACTCTCGCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp ACCCGCATGACACTAGACAGGATGCCATCGGTCCATTCGTTGGTGTaGAGGTCATACTCGCCATACAGCTCCCCTAAGGACAGTGCCTTT +
Preference number: 6 (lower is better)
Translates to: TRMTLDRMPSVHSLV*RSYSPYSSPKDSAF
Trigger: AAAGGCACTGTCCTTAGGGGAGCTGTATGGCGAGTATGACCTCAACACCAACGAATGGACCGATGGCATCCTGTCTAGTGTCATGCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp ATTTGGCCTTCACGATCCAGGACCACACCCCCACGCAGGAAGAAGTaGTACTCATCCATGTTGAGCTTGCCGGACGTCTCCAGGATTTTG +
Preference number: 6 (lower is better)
Translates to: IWPSRSRTTPPRRKK*YSSMLSLPDVSRIL
Trigger: CAAAATCCTGGAGACGTCCGGCAAGCTCAACATGGATGAGTACAACTTCTTCCTGCGTGGGGGTGTGGTCCTGGATCGTGAAGGCCAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp ACACACCCTTGGTCCGCTTCTCTACTCTGCTCTCAATaGTGCTCTGCACATTGTTTGACGTGGTCTGTGCGG +
Preference number: 6 (lower is better)
Translates to: THPWSASLLCSQ*CSAHCLTWSVR
Trigger: CCGCACAGACCACGTCAAACAATGTGCAGAGCATCATTGAGAGCAGAGTAGAGAAGCGGACCAAGGGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CCTTGCTTGCCGTCTTCCCAACGGGCAAAGTGGTACTaGCATTCGCATACCTCAATAAGGTCTTTGCAGCGC +
Preference number: 6 (lower is better)
Translates to: PCLPSSQRAKWY*HSHTSIRSLQR
Trigger: GCGCTGCAAAGACCTTATTGAGGTATGCGAATGTCAGTACCACTTTGCCCGTTGGGAAGACGGCAAGCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208777.2
CDS GCA 72 bp ATGGACTCGATGTGTTTCACACCCTTCTTCACCAGCTaGTTGCTGATGCTGGACAGGTCCATGCAGCGATTG +
Preference number: 6 (lower is better)
Translates to: MDSMCFTPFFTS*LLMLDRSMQRL
Trigger: CAATCGCTGCATGGACCTGTCCAGCATCAGCAAGCAGCTGGTGAAGAAGGGTGTGAAACACATCGAGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TTATCCAGGAACCGGATCCGCTCTTTGAACAGGGCCTaGTCGTCTGGGGACAGCATGGCAATAATCCTGTTA +
Preference number: 6 (lower is better)
Translates to: LSRNRIRSLNRA*SSGDSMAIILL
Trigger: TAACAGGATTATTGCCATGCTGTCCCCAGACGAGCAGGCCCTGTTCAAAGAGCGGATCCGGTTCCTGGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp AATGTGCAGGTTGTTCCGCACGCGCTCGATGAGGTATaGAAAGAGGCTGTCCGAGGATTCTGGTATCTGTTC +
Preference number: 6 (lower is better)
Translates to: NVQVVPHALDEV*KEAVRGFWYLF
Trigger: GAACAGATACCAGAATCCTCGGACAGCCTCTTTGCATACCTCATCGAGCGCGTGCGGAACAACCTGCACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp ATAGCGATCTTCTCACTATTGGCAGTGACGGCCTTCTaGTGCTCATCTGCTTCCCGCTTCTGCTGCACAATG +
Preference number: 6 (lower is better)
Translates to: IAIFSLLAVTAF*CSSASRFCCTM
Trigger: CATTGTGCAGCAGAAGCGGGAAGCAGATGAGCAGCAGAAGGCCGTCACTGCCAATAGTGAGAAGATCGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TCAATGTTGATCTCTGTGGTCTCACTGGTCTCCAGTTaGTCGGTCACCTCGGTGGCCGTTATCTTGGATGTC +
Preference number: 6 (lower is better)
Translates to: SMLISVVSLVSS*SVTSVAVILDV
Trigger: GACATCCAAGATAACGGCCACCGAGGTGACCGAGCAACTGGAGACCAGTGAGACCACAGAGATCAACATTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp AGACAGCATAGGTGTGGTAGTCATTCAGGTACTCGATaGGGTCCTCCAGCTTATTGCTGCGGTGGCTCTTGT +
Preference number: 6 (lower is better)
Translates to: RQHRCGSHSGTR*GPPAYCCGGSC
Trigger: ACAAGAGCCACCGCAGCAATAAGCTGGAGGACCGCATCGAGTACCTGAATGACTACCACACCTATGCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp GATGCCTATGACAAAGGAGGCTCGATCTGTGCTGCCTaGCCGGTTGGGATAATAATAGCAGGGACAGGAGTA +
Preference number: 6 (lower is better)
Translates to: DAYDKGGSICAA*PVGIIIAGTGV
Trigger: TACTCCTGTCCCTGCTATTATTATCCCAACCGGGCAGGCAGCACAGATCGAGCCTCCTTTGTCATAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GAGGCTCTCCAGCATCTCCAGGACAGTGTCCGGAACTaGCACCTCATACTTCTCCAAAATGGTAAACTGCTC +
Preference number: 6 (lower is better)
Translates to: EALQHLQDSVRN*HLILLQNGKLL
Trigger: GAGCAGTTTACCATTTTGGAGAAGTATGAGGTGCCAGTTCCGGACACTGTCCTGGAGATGCTGGAGAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TTGCTGCTGCCGGTGCCACCCACAATCATGGTGGAGTaGCGAGAGTTCTTGGTTTCGTACAACTGTAAAACC +
Preference number: 6 (lower is better)
Translates to: LLLPVPPTIMVE*REFLVSYNCKT
Trigger: GGTTTTACAGTTGTACGAAACCAAGAACTCTCGCCACTCCACCATGATTGTGGGTGGCACCGGCAGCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TTCCCACAGGACCCACCAGTAAGACAGGATTCTGGTTaGCCACCAGGGTGCTCACTAAGTAGTTATACCGCA +
Preference number: 6 (lower is better)
Translates to: FPQDPPVRQDSG*PPGCSLSSYTA
Trigger: TGCGGTATAACTACTTAGTGAGCACCCTGGTGGCCAACCAGAATCCTGTCTTACTGGTGGGTCCTGTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCAATACTGTCAGGTCTACCAGGTCTTCATAGACCTTaGGCTCCTTCAGGAAGTCCCCAAAGATGGGAGGGC +
Preference number: 6 (lower is better)
Translates to: SILSGLPGLHRP*APSGSPQRWEG
Trigger: GCCCTCCCATCTTTGGGGACTTCCTGAAGGAGCCCAAGGTCTATGAAGACCTGGTAGACCTGACAGTATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CTCGATGAGGTATGCAAAGAGGCTGTCCGAGGATTCTaGTATCTGTTCTGCCCGGGCCTGGTCTATGATATG +
Preference number: 6 (lower is better)
Translates to: LDEVCKEAVRGF*YLFCPGLVYDM
Trigger: CATATCATAGACCAGGCCCGGGCAGAACAGATACCAGAATCCTCGGACAGCCTCTTTGCATACCTCATCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CCGACCACCAATTCGAGCTACAGATTTGTTGAGCACTaGGTTGAGCGTGGGGTCCAGATACTCCTGCACATT +
Preference number: 6 (lower is better)
Translates to: PTTNSSYRFVEH*VERGVQILLHI
Trigger: AATGTGCAGGAGTATCTGGACCCCACGCTCAACCCAGTGCTCAACAAATCTGTAGCTCGAATTGGTGGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp ATCTCTTCCAGGCTTGTTGACATGACGATGAGGCCCTaGATGCCCTTCTCCAAGTCTGTCAGGGAGAACAAG +
Preference number: 6 (lower is better)
Translates to: ISSRLVDMTMRP*MPFSKSVRENK
Trigger: CTTGTTCTCCCTGACAGACTTGGAGAAGGGCATCCAGGGCCTCATCGTCATGTCAACAAGCCTGGAAGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CGTAACAGTGACATGTCCAGTCGCCGAATGCAGTCCTaGTCCAGCGTCGCTGTCCACTCTTGGAAGGTTTTT +
Preference number: 6 (lower is better)
Translates to: RNSDMSSRRMQS*SSVAVHSWKVF
Trigger: AAAAACCTTCCAAGAGTGGACAGCGACGCTGGACAAGGACTGCATTCGGCGACTGGACATGTCACTGTTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TTTCTTCAGCATCTGCTCGCTATCCAGCAGGATTTGTaGGAAGGTGAGCCACTCCCCATTGAGGCTCTCCAG +
Preference number: 6 (lower is better)
Translates to: FLQHLLAIQQDL*EGEPLPIEALQ
Trigger: CTGGAGAGCCTCAATGGGGAGTGGCTCACCTTCCAACAAATCCTGCTGGATAGCGAGCAGATGCTGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GTGTTTCTTCAGCATCTGCTCGCTATCCAGCAGGATTaGTTGGAAGGTGAGCCACTCCCCATTGAGGCTCTC +
Preference number: 6 (lower is better)
Translates to: VFLQHLLAIQQD*LEGEPLPIEAL
Trigger: GAGAGCCTCAATGGGGAGTGGCTCACCTTCCAACAAATCCTGCTGGATAGCGAGCAGATGCTGAAGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TCGGCGGCATGGATAAGGCCTGTCTTGAACTTCTCCTaGTGTTTCTTCAGCATCTGCTCGCTATCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SAAWIRPVLNFS*CFFSICSLSSR
Trigger: CCTGCTGGATAGCGAGCAGATGCTGAAGAAACACAAGGAGAAGTTCAAGACAGGCCTTATCCATGCCGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp AGAGACACCTGCTCGGGCATCGCAATGCGCTCGCCATaGATAAGGGTCAGCACTTTGTTATCGTCCATGACA +
Preference number: 6 (lower is better)
Translates to: RDTCSGIAMRSP*IRVSTLLSSMT
Trigger: TGTCATGGACGATAACAAAGTGCTGACCCTTATCAATGGCGAGCGCATTGCGATGCCCGAGCAGGTGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TCTAGCAAGGCCTCTCGGGGCCACTCTGAGAACCAGTaGATGGTTGTACAGTTTACTAAGGCTGGGTACTGG +
Preference number: 6 (lower is better)
Translates to: SSKASRGHSENQ*MVVQFTKAGYW
Trigger: CCAGTACCCAGCCTTAGTAAACTGTACAACCATCAACTGGTTCTCAGAGTGGCCCCGAGAGGCCTTGCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TGGCACTTGACCTCCTCAATAGCGATCTTCTCACTATaGGCAGTGACGGCCTTCTGCTGCTCATCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: WHLTSSIAIFSL*AVTAFCCSSAS
Trigger: GGAAGCAGATGAGCAGCAGAAGGCCGTCACTGCCAATAGTGAGAAGATCGCTATTGAGGAGGTCAAGTGCCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp AGCTGGGCTTCCAGGCCCTGCTCCTTTACAGCGAAGTaGACAATGGTGGTCTTAGCCGAAGTCTCTGGATTA +
Preference number: 6 (lower is better)
Translates to: SWASRPCSFTAK*TMVVLAEVSGL
Trigger: TAATCCAGAGACTTCGGCTAAGACCACCATTGTCAACTTCGCTGTAAAGGAGCAGGGCCTGGAAGCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GTCAATGTTGATCTCTGTGGTCTCACTGGTCTCCAGTaGCTCGGTCACCTCGGTGGCCGTTATCTTGGATGT +
Preference number: 6 (lower is better)
Translates to: VNVDLCGLTGLQ*LGHLGGRYLGC
Trigger: ACATCCAAGATAACGGCCACCGAGGTGACCGAGCAACTGGAGACCAGTGAGACCACAGAGATCAACATTGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TTGTTATATCTCTGGATCTCCTGCAGGAGGACCACATaGAGTGGGGAGGGGTCAAGAGCCAGCAACTTTCGG +
Preference number: 6 (lower is better)
Translates to: LLYLWISCRRTT*SGEGSRASNFR
Trigger: CCGAAAGTTGCTGGCTCTTGACCCCTCCCCACTCAATGTGGTCCTCCTGCAGGAGATCCAGAGATATAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CTGCACAGTCTCCTCGAAGTTCTCTGGGGTGATGGGAACTGGGGCTaGTCGAATGAAGTACACAATCTGATTCTGCGTCTGCACAGGCAT +
Preference number: 6 (lower is better)
Translates to: LHSLLEVLWGDGNWG*SNEVHNLILRLHRH
Trigger: ATGCCTGTGCAGACGCAGAATCAGATTGTGTACTTCATTCGACAAGCCCCAGTTCCCATCACCCCAGAGAACTTCGAGGAGACTGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GTCCAGTCGCCGAATGCAGTCCTTGTCCAGCGTCGCTGTCCACTCTaGGAAGGTTTTTCGAACCATTTCATCAATGGCTTGAGCCATCTG +
Preference number: 6 (lower is better)
Translates to: VQSPNAVLVQRRCPL*EGFSNHFINGLSHL
Trigger: CAGATGGCTCAAGCCATTGATGAAATGGTTCGAAAAACCTTCCAAGAGTGGACAGCGACGCTGGACAAGGACTGCATTCGGCGACTGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GTTCTTGAACACTTCGTAGGAGTTGGTCATGATGTTCACCACATCTaGGTGCAGCTTCACCAGCTTTTGCTGTGCGGCCATCCGGTGCTC +
Preference number: 6 (lower is better)
Translates to: VLEHFVGVGHDVHHI*VQLHQLLLCGHPVL
Trigger: GAGCACCGGATGGCCGCACAGCAAAAGCTGGTGAAGCTGCACCAAGATGTGGTGAACATCATGACCAACTCCTACGAAGTGTTCAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CTTCTCCTTGTGTTTCTTCAGCATCTGCTCGCTATCCAGCAGGATTaGTTGGAAGGTGAGCCACTCCCCATTGAGGCTCTCCAGCATCTC +
Preference number: 6 (lower is better)
Translates to: LLLVFLQHLLAIQQD*LEGEPLPIEALQHL
Trigger: GAGATGCTGGAGAGCCTCAATGGGGAGTGGCTCACCTTCCAACAAATCCTGCTGGATAGCGAGCAGATGCTGAAGAAACACAAGGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CTGAGGGCTGGATTCCGCAGGTCTGAGATGAGGGGCATGGTCCTCTaGAACTGCTCTATTTTGGAGCGAGTCGTTTCAATGATTTCCCAG +
Preference number: 6 (lower is better)
Translates to: LRAGFRRSEMRGMVL*NCSILERVVSMISQ
Trigger: CTGGGAAATCATTGAAACGACTCGCTCCAAAATAGAGCAGTTCAAGAGGACCATGCCCCTCATCTCAGACCTGCGGAATCCAGCCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp ATGACCGGGAGCTCGATGTTGGGGAAGAGGTCCTGCACAATAGCATaGAACAATGGGACATCCACTGACGTCAGCTTGGCGATGTTCATG +
Preference number: 6 (lower is better)
Translates to: MTGSSMLGKRSCTIA*NNGTSTDVSLAMFM
Trigger: CATGAACATCGCCAAGCTGACGTCAGTGGATGTCCCATTGTTCAATGCTATTGTGCAGGACCTCTTCCCCAACATCGAGCTCCCGGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TCTCGGAAGAGCACCAGCTGCATTGGCACAACCGAAGGAGACAGATaGTACTCATTCAGGGCCGTCTCCATGGCTGTCTTCAATACTGTC +
Preference number: 6 (lower is better)
Translates to: SRKSTSCIGTTEGDR*YSFRAVSMAVFNTV
Trigger: GACAGTATTGAAGACAGCCATGGAGACGGCCCTGAATGAGTACAATCTGTCTCCTTCGGTTGTGCCAATGCAGCTGGTGCTCTTCCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp AGCATCCGACCACCAATTCGAGCTACAGATTTGTTGAGCACTGGGTaGAGCGTGGGGTCCAGATACTCCTGCACATTCTGGAGTAGCACT +
Preference number: 6 (lower is better)
Translates to: SIRPPIRATDLLSTG*SVGSRYSCTFWSST
Trigger: AGTGCTACTCCAGAATGTGCAGGAGTATCTGGACCCCACGCTCAACCCAGTGCTCAACAAATCTGTAGCTCGAATTGGTGGTCGGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CCACATCCTTCTCAAAGGCCTTCACGAATCGAGATGCCTTCATGGTaGACAGGGCCACCTGATTATCTTCCAGTGCCTGGAACACTTCCT +
Preference number: 6 (lower is better)
Translates to: PHPSQRPSRIEMPSW*TGPPDYLPVPGTLP
Trigger: AGGAAGTGTTCCAGGCACTGGAAGATAATCAGGTGGCCCTGTCAACCATGAAGGCATCTCGATTCGTGAAGGCCTTTGAGAAGGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TTCCCAATGGGCTTCACCTCTTCTTCAAAGTCCTGGAGCTTCTGGTaGATCATGGTGCCAAATATGCGGATGATCTGGGATTCCGTGGGG +
Preference number: 6 (lower is better)
Translates to: FPMGFTSSSKSWSFW*IMVPNMRMIWDSVG
Trigger: CCCCACGGAATCCCAGATCATCCGCATATTTGGCACCATGATCAACCAGAAGCTCCAGGACTTTGAAGAAGAGGTGAAGCCCATTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GCATACCTCAATAAGGTCTTTGCAGCGCTGCACAAAGGCATCTACTaGAGCAAATATGCTCGTCTGGTCCAGAACCCAGCCCCGATTGGA +
Preference number: 6 (lower is better)
Translates to: AYLNKVFAALHKGIY*SKYARLVQNPAPIG
Trigger: TCCAATCGGGGCTGGGTTCTGGACCAGACGAGCATATTTGCTCAAGTAGATGCCTTTGTGCAGCGCTGCAAAGACCTTATTGAGGTATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208777.2
CDS TCA 72 bp TTCACAATCTGCTCCAAGGTGAAGCTCTCTGACTCCTaGTCAAACTCCCGCTGGACTTCCTCTTTGACCTGG +
Preference number: 6 (lower is better)
Translates to: FTICSKVKLSDS*SNSRWTSSLTW
Trigger: CCAGGTCAAAGAGGAAGTCCAGCGGGAGTTTGATCAGGAGTCAGAGAGCTTCACCTTGGAGCAGATTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CTCAAAGGCCTTCACGAATCGAGATGCCTTCATGGTTaGCAGGGCCACCTGATTATCTTCCAGTGCCTGGAA +
Preference number: 6 (lower is better)
Translates to: LKGLHESRCLHG*QGHLIIFQCLE
Trigger: TTCCAGGCACTGGAAGATAATCAGGTGGCCCTGTCAACCATGAAGGCATCTCGATTCGTGAAGGCCTTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp AGTTTACTAAGGCTGGGTACTGGCGAATCCAATTCCTaGAGGGGTCTCCCACGGGACTTAGACAGAGCACAA +
Preference number: 6 (lower is better)
Translates to: SLLRLGTGESNS*RGLPRDLDRAQ
Trigger: TTGTGCTCTGTCTAAGTCCCGTGGGAGACCCCTTCAGGAATTGGATTCGCCAGTACCCAGCCTTAGTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CAATTTCCACCTGCGCAGGGGGTCGTCCGTAGGACTTaGTCTCACCTATGTCCTTCTTGTTCAGAGACTCTA +
Preference number: 6 (lower is better)
Translates to: QFPPAQGVVRRT*SHLCPSCSETL
Trigger: TAGAGTCTCTGAACAAGAAGGACATAGGTGAGATCAAGTCCTACGGACGACCCCCTGCGCAGGTGGAAATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CATCAATGGCTTGAGCCATCTGCTGATAGGTATGTATaGTCTCCTCGCCAGTCCCAATATGGGGCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: HQWLEPSADRYV*SPRQSQYGAGS
Trigger: ACTTCCTGCCCCATATTGGGACTGGCGAGGAGAGCATACATACCTATCAGCAGATGGCTCAAGCCATTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TCAATGACCGGGAGCTCGATGTTGGGGAAGAGGTCCTaGACAATAGCATTGAACAATGGGACATCCACTGAC +
Preference number: 6 (lower is better)
Translates to: SMTGSSMLGKRS*TIALNNGTSTD
Trigger: GTCAGTGGATGTCCCATTGTTCAATGCTATTGTGCAGGACCTCTTCCCCAACATCGAGCTCCCGGTCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CACGAAAAGGAAAGACGTGGTCTGGAGTTCTACCCCTaGCTGTCGATACAAGCGCTTGATATCGTCTCGGAA +
Preference number: 6 (lower is better)
Translates to: HEKERRGLEFYP*LSIQALDIVSE
Trigger: TTCCGAGACGATATCAAGCGCTTGTATCGACAGGCAGGGGTAGAACTCCAGACCACGTCTTTCCTTTTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp AGGGCGTCAAGTAGGATGACTTGGCCAGAAACAGGATaGACTCGATGTGTTTCACACCCTTCTTCACCAGCT +
Preference number: 6 (lower is better)
Translates to: RASSRMTWPETG*TRCVSHPSSPA
Trigger: AGCTGGTGAAGAAGGGTGTGAAACACATCGAGTCCATCCTGTTTCTGGCCAAGTCATCCTACTTGACGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CCTTCTCAAAGGCCTTCACGAATCGAGATGCCTTCATaGTTGACAGGGCCACCTGATTATCTTCCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: PSQRPSRIEMPS*LTGPPDYLPVP
Trigger: AGGCACTGGAAGATAATCAGGTGGCCCTGTCAACCATGAAGGCATCTCGATTCGTGAAGGCCTTTGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp AGCCACGACTCCACTGGTCCTTCTAGAAGTACTGGGTaGAGGAAGTCAATGTATTCACCGTCACCTGAGAAC +
Preference number: 6 (lower is better)
Translates to: SHDSTGPSRSTG*RKSMYSPSPEN
Trigger: GTTCTCAGGTGACGGTGAATACATTGACTTCCTCCACCCAGTACTTCTAGAAGGACCAGTGGAGTCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp AAACGTCCAGGGTGGCCTCTGTTACCACATTCCCAATaGGCTTCACCTCTTCTTCAAAGTCCTGGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: KRPGWPLLPHSQ*ASPLLQSPGAS
Trigger: AGAAGCTCCAGGACTTTGAAGAAGAGGTGAAGCCCATTGGGAATGTGGTAACAGAGGCCACCCTGGACGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GTGTTCAATGGCCTCTCGGAAGAGCACCAGCTGCATTaGCACAACCGAAGGAGACAGATTGTACTCATTCAG +
Preference number: 6 (lower is better)
Translates to: VFNGLSEEHQLH*HNRRRQIVLIQ
Trigger: CTGAATGAGTACAATCTGTCTCCTTCGGTTGTGCCAATGCAGCTGGTGCTCTTCCGAGAGGCCATTGAACAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp ATTATCCCAGTAGGCATCTGCCAGCCAACTGGTACATaGATTGTCCATTTGGCCTTCACGATCCAGGACCAC +
Preference number: 6 (lower is better)
Translates to: IIPVGICQPTGT*IVHLAFTIQDH
Trigger: GTGGTCCTGGATCGTGAAGGCCAAATGGACAATCCATGTACCAGTTGGCTGGCAGATGCCTACTGGGATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CTCCTCGAAGTTCTCTGGGGTGATGGGAACTGGGGCTaGTCGAATGAAGTACACAATCTGATTCTGCGTCTG +
Preference number: 6 (lower is better)
Translates to: LLEVLWGDGNWG*SNEVHNLILRL
Trigger: CAGACGCAGAATCAGATTGTGTACTTCATTCGACAAGCCCCAGTTCCCATCACCCCAGAGAACTTCGAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CACTTCGTAGGAGTTGGTCATGATGTTCACCACATCTaGGTGCAGCTTCACCAGCTTTTGCTGTGCGGCCAT +
Preference number: 6 (lower is better)
Translates to: HFVGVGHDVHHI*VQLHQLLLCGH
Trigger: ATGGCCGCACAGCAAAAGCTGGTGAAGCTGCACCAAGATGTGGTGAACATCATGACCAACTCCTACGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GGATTCCGCAGGTCTGAGATGAGGGGCATGGTCCTCTaGAACTGCTCTATTTTGGAGCGAGTCGTTTCAATG +
Preference number: 6 (lower is better)
Translates to: GFRRSEMRGMVL*NCSILERVVSM
Trigger: CATTGAAACGACTCGCTCCAAAATAGAGCAGTTCAAGAGGACCATGCCCCTCATCTCAGACCTGCGGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TCTCAAAGGCCTTCACGAATCGAGATGCCTTCATGGTaGACAGGGCCACCTGATTATCTTCCAGTGCCTGGA +
Preference number: 6 (lower is better)
Translates to: SQRPSRIEMPSW*TGPPDYLPVPG
Trigger: TCCAGGCACTGGAAGATAATCAGGTGGCCCTGTCAACCATGAAGGCATCTCGATTCGTGAAGGCCTTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CAGTTGTTGTTGACCTGGTCAAATAGGGCTGACTCATaGGGCAGCTGTTTCCGGATGTCCTCTCCAAGGAAG +
Preference number: 6 (lower is better)
Translates to: QLLLTWSNRADS*GSCFRMSSPRK
Trigger: CTTCCTTGGAGAGGACATCCGGAAACAGCTGCCCAATGAGTCAGCCCTATTTGACCAGGTCAACAACAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CGCTTCTCTACTCTGCTCTCAATGATGCTCTGCACATaGTTTGACGTGGTCTGTGCGGACATGTTGACGACG +
Preference number: 6 (lower is better)
Translates to: RFSTLLSMMLCT*FDVVCADMLTT
Trigger: CGTCGTCAACATGTCCGCACAGACCACGTCAAACAATGTGCAGAGCATCATTGAGAGCAGAGTAGAGAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CGCTGTCCACTCTTGGAAGGTTTTTCGAACCATTTCATCAATGGCTaGAGCCATCTGCTGATAGGTATGTATGCTCTCCTCGCCAGTCCC +
Preference number: 6 (lower is better)
Translates to: RCPLLEGFSNHFING*SHLLIGMYALLASP
Trigger: GGGACTGGCGAGGAGAGCATACATACCTATCAGCAGATGGCTCAAGCCATTGATGAAATGGTTCGAAAAACCTTCCAAGAGTGGACAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TGGCTAATTCGTAACAGTGACATGTCCAGTCGCCGAATGCAGTCCTaGTCCAGCGTCGCTGTCCACTCTTGGAAGGTTTTTCGAACCATT +
Preference number: 6 (lower is better)
Translates to: WLIRNSDMSSRRMQS*SSVAVHSWKVFRTI
Trigger: AATGGTTCGAAAAACCTTCCAAGAGTGGACAGCGACGCTGGACAAGGACTGCATTCGGCGACTGGACATGTCACTGTTACGAATTAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TGTGCCTTCTTCTTGAAGTCATCGGCGGCATGGATAAGGCCTGTCTaGAACTTCTCCTTGTGTTTCTTCAGCATCTGCTCGCTATCCAGC +
Preference number: 6 (lower is better)
Translates to: CAFFLKSSAAWIRPV*NFSLCFFSICSLSS
Trigger: GCTGGATAGCGAGCAGATGCTGAAGAAACACAAGGAGAAGTTCAAGACAGGCCTTATCCATGCCGCCGATGACTTCAAGAAGAAGGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp ACGGTGCTGGTAAACGGCCCTTTGAACTCAAAGTCTTCTAGAAGGTaGTGTGCCTTCTTCTTGAAGTCATCGGCGGCATGGATAAGGCCT +
Preference number: 6 (lower is better)
Translates to: TVLVNGPLNSKSSRR*CAFFLKSSAAWIRP
Trigger: AGGCCTTATCCATGCCGCCGATGACTTCAAGAAGAAGGCACACAACCTTCTAGAAGACTTTGAGTTCAAAGGGCCGTTTACCAGCACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CGCAGGTCTGAGATGAGGGGCATGGTCCTCTTGAACTGCTCTATTTaGGAGCGAGTCGTTTCAATGATTTCCCAGTTTCGGTCCTTGTAC +
Preference number: 6 (lower is better)
Translates to: RRSEMRGMVLLNCSI*ERVVSMISQFRSLY
Trigger: GTACAAGGACCGAAACTGGGAAATCATTGAAACGACTCGCTCCAAAATAGAGCAGTTCAAGAGGACCATGCCCCTCATCTCAGACCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TCAAACAAGAGAGACACCTGCTCGGGCATCGCAATGCGCTCGCCATaGATAAGGGTCAGCACTTTGTTATCGTCCATGACAGAGTTCATG +
Preference number: 6 (lower is better)
Translates to: SNKRDTCSGIAMRSP*IRVSTLLSSMTEFM
Trigger: CATGAACTCTGTCATGGACGATAACAAAGTGCTGACCCTTATCAATGGCGAGCGCATTGCGATGCCCGAGCAGGTGTCTCTCTTGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CCTGTGGCCTCATTCAACAAGCGCAGGATCTCATCCTCTAGTTCTTaGAGCTTTCTCTTTCCTGCAGCGATGTTGATGACCAGAGAGTCC +
Preference number: 6 (lower is better)
Translates to: PVASFNKRRISSSSS*SFLFPAAMLMTRES
Trigger: GGACTCTCTGGTCATCAACATCGCTGCAGGAAAGAGAAAGCTCAAAGAACTAGAGGATGAGATCCTGCGCTTGTTGAATGAGGCCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CCGCCACGCACGGCTCGCAGCGTTTGCAGATTTTTATaGAAGATGTCCTCGATTTCTAGCAAGTTTCGTGTG +
Preference number: 6 (lower is better)
Translates to: PPRTARSVCRFL*KMSSISSKFRV
Trigger: CACACGAAACTTGCTAGAAATCGAGGACATCTTTCATAAAAATCTGCAAACGCTGCGAGCCGTGCGTGGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS TCA 72 bp ACGAATCGAGATGCCTTCATGGTTGACAGGGCCACCTaGTTATCTTCCAGTGCCTGGAACACTTCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: TNRDAFMVDRAT*LSSSAWNTSSV
Trigger: AACAGAGGAAGTGTTCCAGGCACTGGAAGATAATCAGGTGGCCCTGTCAACCATGAAGGCATCTCGATTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp TATCGTCTCGGAACTCCTGTTTGCGGTAGTGCTTGGTaGCCTCGATCTGGAACGTGTTATAATCGCAGATGG +
Preference number: 6 (lower is better)
Translates to: YRLGTPVCGSAW*PRSGTCYNRRW
Trigger: CCATCTGCGATTATAACACGTTCCAGATCGAGGTCACCAAGCACTACCGCAAACAGGAGTTCCGAGACGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CGCAGGTCTGAGATGAGGGGCATGGTCCTCTTGAACTaGTCTATTTTGGAGCGAGTCGTTTCAATGATTTCC +
Preference number: 6 (lower is better)
Translates to: RRSEMRGMVLLN*SILERVVSMIS
Trigger: GGAAATCATTGAAACGACTCGCTCCAAAATAGAGCAGTTCAAGAGGACCATGCCCCTCATCTCAGACCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TTTCTATCAGTGTCTCCAGGAGTCCTGGGTAGTGGGTaGTCCGGAGAGCGTTATTGTCTTTGTTCATTCGGT +
Preference number: 6 (lower is better)
Translates to: FLSVSPGVLGSG*SGERYCLCSFG
Trigger: ACCGAATGAACAAAGACAATAACGCTCTCCGGAGCACCCACTACCCAGGACTCCTGGAGACACTGATAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CCACCAGTAAGACAGGATTCTGGTTGGCCACCAGGGTaGTCACTAAGTAGTTATACCGCACAGTATCAACAG +
Preference number: 6 (lower is better)
Translates to: PPVRQDSGWPPG*SLSSYTAQYQQ
Trigger: CTGTTGATACTGTGCGGTATAACTACTTAGTGAGCACCCTGGTGGCCAACCAGAATCCTGTCTTACTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CACAGTCTCCTCGAAGTTCTCTGGGGTGATGGGAACTaGGGCTTGTCGAATGAAGTACACAATCTGATTCTG +
Preference number: 6 (lower is better)
Translates to: HSLLEVLWGDGN*GLSNEVHNLIL
Trigger: CAGAATCAGATTGTGTACTTCATTCGACAAGCCCCAGTTCCCATCACCCCAGAGAACTTCGAGGAGACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GATTGCGTTCATTTCTATCAGTGTCTCCAGGAGTCCTaGGTAGTGGGTGCTCCGGAGAGCGTTATTGTCTTT +
Preference number: 6 (lower is better)
Translates to: DCVHFYQCLQES*VVGAPESVIVF
Trigger: AAAGACAATAACGCTCTCCGGAGCACCCACTACCCAGGACTCCTGGAGACACTGATAGAAATGAACGCAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp CTGTCCGAGGATTCTGGTATCTGTTCTGCCCGGGCCTaGTCTATGATATGGTTCTGGATCTCTTCAAATTCG +
Preference number: 6 (lower is better)
Translates to: LSEDSGICSARA*SMIWFWISSNS
Trigger: CGAATTTGAAGAGATCCAGAACCATATCATAGACCAGGCCCGGGCAGAACAGATACCAGAATCCTCGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CCGAATGCAGTCCTTGTCCAGCGTCGCTGTCCACTCTaGGAAGGTTTTTCGAACCATTTCATCAATGGCTTG +
Preference number: 6 (lower is better)
Translates to: PNAVLVQRRCPL*EGFSNHFINGL
Trigger: CAAGCCATTGATGAAATGGTTCGAAAAACCTTCCAAGAGTGGACAGCGACGCTGGACAAGGACTGCATTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CACTGCCTCCCACTTGCTGCTGGAGCCCCCGACCTTTaGAATTTTCAGCAGTTTGATGTTGTCAAAGCACTT +
Preference number: 6 (lower is better)
Translates to: HCLPLAAGAPDL*NFQQFDVVKAL
Trigger: AAGTGCTTTGACAACATCAAACTGCTGAAAATTCAAAAGGTCGGGGGCTCCAGCAGCAAGTGGGAGGCAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GTGCCACCCACAATCATGGTGGAGTGGCGAGAGTTCTaGGTTTCGTACAACTGTAAAACCTTGGTGAGGGTA +
Preference number: 6 (lower is better)
Translates to: VPPTIMVEWREF*VSYNCKTLVRV
Trigger: TACCCTCACCAAGGTTTTACAGTTGTACGAAACCAAGAACTCTCGCCACTCCACCATGATTGTGGGTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TTGAAGTCATCGGCGGCATGGATAAGGCCTGTCTTGAACTTCTCCTaGTGTTTCTTCAGCATCTGCTCGCTATCCAGCAGGATTTGTTGG +
Preference number: 6 (lower is better)
Translates to: LKSSAAWIRPVLNFS*CFFSICSLSSRICW
Trigger: CCAACAAATCCTGCTGGATAGCGAGCAGATGCTGAAGAAACACAAGGAGAAGTTCAAGACAGGCCTTATCCATGCCGCCGATGACTTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GGCCCTTTGAACTCAAAGTCTTCTAGAAGGTTGTGTGCCTTCTTCTaGAAGTCATCGGCGGCATGGATAAGGCCTGTCTTGAACTTCTCC +
Preference number: 6 (lower is better)
Translates to: GPLNSKSSRRLCAFF*KSSAAWIRPVLNFS
Trigger: GGAGAAGTTCAAGACAGGCCTTATCCATGCCGCCGATGACTTCAAGAAGAAGGCACACAACCTTCTAGAAGACTTTGAGTTCAAAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TCCTGCACAATAGCATTGAACAATGGGACATCCACTGACGTCAGCTaGGCGATGTTCATGTCTCTCATGGAGAGCAGCAGAACCTCTTCA +
Preference number: 6 (lower is better)
Translates to: SCTIALNNGTSTDVS*AMFMSLMESSRTSS
Trigger: TGAAGAGGTTCTGCTGCTCTCCATGAGAGACATGAACATCGCCAAGCTGACGTCAGTGGATGTCCCATTGTTCAATGCTATTGTGCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp TATGAAAGATGTCCTCGATTTCTAGCAAGTTTCGTGTaGTCTGTGGCCCCTGGGCACCGAAGAAGCATGGAA +
Preference number: 6 (lower is better)
Translates to: YERCPRFLASFV*SVAPGHRRSME
Trigger: TTCCATGCTTCTTCGGTGCCCAGGGGCCACAGATCACACGAAACTTGCTAGAAATCGAGGACATCTTTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
ENSMUST00000208777.2
CDS TCA 72 bp TGTTCAGCTCCCGGTTCACCAGGGCTAACTCACTATTaGACAGCATGTAGAGGTCGACAGCCTTTTTCTCAT +
Preference number: 6 (lower is better)
Translates to: CSAPGSPGLTHY*TACRGRQPFSH
Trigger: ATGAGAAAAAGGCTGTCGACCTCTACATGCTGTTCAATAGTGAGTTAGCCCTGGTGAACCGGGAGCTGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp GTCCTGCACAATAGCATTGAACAATGGGACATCCACTaGCGTCAGCTTGGCGATGTTCATGTCTCTCATGGA +
Preference number: 6 (lower is better)
Translates to: VLHNSIEQWDIH*RQLGDVHVSHG
Trigger: TCCATGAGAGACATGAACATCGCCAAGCTGACGTCAGTGGATGTCCCATTGTTCAATGCTATTGTGCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp TATCTCCGCAGTTCCAACAGCATCTTCTGGGAATACTaGGCCACTGACCAGTGCATGGTGACAAAGATTTGG +
Preference number: 6 (lower is better)
Translates to: YLRSSNSIFWEY*ATDQCMVTKIW
Trigger: CCAAATCTTTGTCACCATGCACTGGTCAGTGGCTCAGTATTCCCAGAAGATGCTGTTGGAACTGCGGAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp AGGTTGTGTGCCTTCTTCTTGAAGTCATCGGCGGCATaGATAAGGCCTGTCTTGAACTTCTCCTTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: RLCAFFLKSSAA*IRPVLNFSLCF
Trigger: GAAACACAAGGAGAAGTTCAAGACAGGCCTTATCCATGCCGCCGATGACTTCAAGAAGAAGGCACACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp ATTCGGTCCATGATGGCTTTCCAGTTGTTGTTGACCTaGTCAAATAGGGCTGACTCATTGGGCAGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: IRSMMAFQLLLT*SNRADSLGSCF
Trigger: GAAACAGCTGCCCAATGAGTCAGCCCTATTTGACCAGGTCAACAACAACTGGAAAGCCATCATGGACCGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCAATCTTAAACAATCCAGTTCGAAGCTTATTGGCTTaGTCCAGCAGCTCCTGCCGCTTTTCTCCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: SILNNPVRSLLA*SSSSCRFSPRS
Trigger: GCTTCTGGGAGAAAAGCGGCAGGAGCTGCTGGACCAAGCCAATAAGCTTCGAACTGGATTGTTTAAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TTCTTGAAGTCATCGGCGGCATGGATAAGGCCTGTCTaGAACTTCTCCTTGTGTTTCTTCAGCATCTGCTCG +
Preference number: 6 (lower is better)
Translates to: FLKSSAAWIRPV*NFSLCFFSICS
Trigger: CGAGCAGATGCTGAAGAAACACAAGGAGAAGTTCAAGACAGGCCTTATCCATGCCGCCGATGACTTCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TTGTTCATTCGGTCCATGATGGCTTTCCAGTTGTTGTaGACCTGGTCAAATAGGGCTGACTCATTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LFIRSMMAFQLL*TWSNRADSLGS
Trigger: GCTGCCCAATGAGTCAGCCCTATTTGACCAGGTCAACAACAACTGGAAAGCCATCATGGACCGAATGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp AGTACATGTCCAGGGACTTCTGAATGTCCTCCAGGATaGCGTTCATTTCTATCAGTGTCTCCAGGAGTCCTG +
Preference number: 6 (lower is better)
Translates to: STCPGTSECPPG*RSFLSVSPGVL
Trigger: CAGGACTCCTGGAGACACTGATAGAAATGAACGCAATCCTGGAGGACATTCAGAAGTCCCTGGACATGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp ATAGCATTGAACAATGGGACATCCACTGACGTCAGCTaGGCGATGTTCATGTCTCTCATGGAGAGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: IALNNGTSTDVS*AMFMSLMESSR
Trigger: TCTGCTGCTCTCCATGAGAGACATGAACATCGCCAAGCTGACGTCAGTGGATGTCCCATTGTTCAATGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp ATCGCAATGCGCTCGCCATTGATAAGGGTCAGCACTTaGTTATCGTCCATGACAGAGTTCATGCTCTCGATC +
Preference number: 6 (lower is better)
Translates to: IAMRSPLIRVST*LSSMTEFMLSI
Trigger: GATCGAGAGCATGAACTCTGTCATGGACGATAACAAAGTGCTGACCCTTATCAATGGCGAGCGCATTGCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GGCATGTTTAGGTCATCCATAAAAGTAATCATGCTTTaGCCCCCGAATGGCACATACACACCCTTGGTCCGC +
Preference number: 6 (lower is better)
Translates to: GMFRSSIKVIML*PPNGTYTPLVR
Trigger: GCGGACCAAGGGTGTGTATGTGCCATTCGGGGGCAAAAGCATGATTACTTTTATGGATGACCTAAACATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GGCTTCACCTCTTCTTCAAAGTCCTGGAGCTTCTGGTaGATCATGGTGCCAAATATGCGGATGATCTGGGAT +
Preference number: 6 (lower is better)
Translates to: GFTSSSKSWSFW*IMVPNMRMIWD
Trigger: ATCCCAGATCATCCGCATATTTGGCACCATGATCAACCAGAAGCTCCAGGACTTTGAAGAAGAGGTGAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GTCAATCTTAAACAATCCAGTTCGAAGCTTATTGGCTaGGTCCAGCAGCTCCTGCCGCTTTTCTCCCAGAAG +
Preference number: 6 (lower is better)
Translates to: VNLKQSSSKLIG*VQQLLPLFSQK
Trigger: CTTCTGGGAGAAAAGCGGCAGGAGCTGCTGGACCAAGCCAATAAGCTTCGAACTGGATTGTTTAAGATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GTTTCGTCAATCTTAAACAATCCAGTTCGAAGCTTATaGGCTTGGTCCAGCAGCTCCTGCCGCTTTTCTCCC +
Preference number: 6 (lower is better)
Translates to: VSSILNNPVRSL*AWSSSSCRFSP
Trigger: GGGAGAAAAGCGGCAGGAGCTGCTGGACCAAGCCAATAAGCTTCGAACTGGATTGTTTAAGATTGACGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TCTAGTTCTTTGAGCTTTCTCTTTCCTGCAGCGATGTaGATGACCAGAGAGTCCTTCTGCTCCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SSSLSFLFPAAM*MTRESFCSSSS
Trigger: AGAGCTGGAGGAGCAGAAGGACTCTCTGGTCATCAACATCGCTGCAGGAAAGAGAAAGCTCAAAGAACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CGAACCCAAACTCCATCCTTGGGTGGATACACCAGGTaGCTGTCGTCCACAGTGGAAACTATAAATTCCCAA +
Preference number: 6 (lower is better)
Translates to: RTQTPSLGGYTR*LSSTVETINSQ
Trigger: TTGGGAATTTATAGTTTCCACTGTGGACGACAGCAACCTGGTGTATCCACCCAAGGATGGAGTTTGGGTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp ATGGCTTTCCAGTTGTTGTTGACCTGGTCAAATAGGGCTGACTCATaGGGCAGCTGTTTCCGGATGTCCTCTCCAAGGAAGATATTCTCT +
Preference number: 6 (lower is better)
Translates to: MAFQLLLTWSNRADS*GSCFRMSSPRKIFS
Trigger: AGAGAATATCTTCCTTGGAGAGGACATCCGGAAACAGCTGCCCAATGAGTCAGCCCTATTTGACCAGGTCAACAACAACTGGAAAGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GACCAGCCGACCAGAGTTCCCCAAGTACTCATAACCATATTGGAATaGTGTGTTGGTCTGGCGGATTATACAGTCATCCACATCCTTCTC +
Preference number: 6 (lower is better)
Translates to: DQPTRVPQVLITILE*CVGLADYTVIHILL
Trigger: GAGAAGGATGTGGATGACTGTATAATCCGCCAGACCAACACACAATTCCAATATGGTTATGAGTACTTGGGGAACTCTGGTCGGCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TCCTTGGCAGGCATGTTTAGGTCATCCATAAAAGTAATCATGCTTTaGCCCCCGAATGGCACATACACACCCTTGGTCCGCTTCTCTACT +
Preference number: 6 (lower is better)
Translates to: SLAGMFRSSIKVIML*PPNGTYTPLVRFST
Trigger: AGTAGAGAAGCGGACCAAGGGTGTGTATGTGCCATTCGGGGGCAAAAGCATGATTACTTTTATGGATGACCTAAACATGCCTGCCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TGCTTCTTCTTCATGACCTTGAGGATTTTCTTGTCTGATCGCTCTTaGGCTGTCATCAGGCACTTGGTGACATCAGCTGTCCACTGGATC +
Preference number: 6 (lower is better)
Translates to: CFFFMTLRIFLSDRS*AVIRHLVTSAVHWI
Trigger: GATCCAGTGGACAGCTGATGTCACCAAGTGCCTGATGACAGCCAAAGAGCGATCAGACAAGAAAATCCTCAAGGTCATGAAGAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108659.2
CDS CAA 90 bp TTATTGTCTTTGTTCATTCGGTCCATGATGGCTTTCCAGTTGTTGTaGACCTGGTCAAATAGGGCTGACTCATTGGGCAGCTGTTTCCGG +
Preference number: 6 (lower is better)
Translates to: LLSLFIRSMMAFQLL*TWSNRADSLGSCFR
Trigger: CCGGAAACAGCTGCCCAATGAGTCAGCCCTATTTGACCAGGTCAACAACAACTGGAAAGCCATCATGGACCGAATGAACAAAGACAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp GCGTTATTGTCTTTGTTCATTCGGTCCATGATGGCTTTCCAGTTGTaGTTGACCTGGTCAAATAGGGCTGACTCATTGGGCAGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: ALLSLFIRSMMAFQL*LTWSNRADSLGSCF
Trigger: GAAACAGCTGCCCAATGAGTCAGCCCTATTTGACCAGGTCAACAACAACTGGAAAGCCATCATGGACCGAATGAACAAAGACAATAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp AGAGCGTTATTGTCTTTGTTCATTCGGTCCATGATGGCTTTCCAGTaGTTGTTGACCTGGTCAAATAGGGCTGACTCATTGGGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: RALLSLFIRSMMAFQ*LLTWSNRADSLGSC
Trigger: ACAGCTGCCCAATGAGTCAGCCCTATTTGACCAGGTCAACAACAACTGGAAAGCCATCATGGACCGAATGAACAAAGACAATAACGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp AGTGATGACCAGCCGACCAGAGTTCCCCAAGTACTCATAACCATATaGGAATTGTGTGTTGGTCTGGCGGATTATACAGTCATCCACATC +
Preference number: 6 (lower is better)
Translates to: SDDQPTRVPQVLITI*ELCVGLADYTVIHI
Trigger: GATGTGGATGACTGTATAATCCGCCAGACCAACACACAATTCCAATATGGTTATGAGTACTTGGGGAACTCTGGTCGGCTGGTCATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TTCTCCCTAGTTTCGTCAATCTTAAACAATCCAGTTCGAAGCTTATaGGCTTGGTCCAGCAGCTCCTGCCGCTTTTCTCCCAGAAGCTTT +
Preference number: 6 (lower is better)
Translates to: FSLVSSILNNPVRSL*AWSSSSCRFSPRSF
Trigger: AAAGCTTCTGGGAGAAAAGCGGCAGGAGCTGCTGGACCAAGCCAATAAGCTTCGAACTGGATTGTTTAAGATTGACGAAACTAGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp TGGGAGGGCGTTTGTTGGGACAGAGATGATGAAACGTaGGGTCAAAGAAGGTACCGAGTTTGTCACTTAAGA +
Preference number: 6 (lower is better)
Translates to: WEGVCWDRDDET*GQRRYRVCHLR
Trigger: TCTTAAGTGACAAACTCGGTACCTTCTTTGACCTCACGTTTCATCATCTCTGTCCCAACAAACGCCCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp TCTTCTGGGAATACTGAGCCACTGACCAGTGCATGGTaGCAAAGATTTGGGCCACTTTCCTGTGGATATTCT +
Preference number: 6 (lower is better)
Translates to: SSGNTEPLTSAW*QRFGPLSCGYS
Trigger: AGAATATCCACAGGAAAGTGGCCCAAATCTTTGTCACCATGCACTGGTCAGTGGCTCAGTATTCCCAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp TATATCCAGACACGAGCTCCAGGTAGTTTGTGGGTGTaGCATAGTTGTATCTCCGCAGTTCCAACAGCATCT +
Preference number: 6 (lower is better)
Translates to: YIQTRAPGSLWV*HSCISAVPTAS
Trigger: AGATGCTGTTGGAACTGCGGAGATACAACTATGTCACACCCACAAACTACCTGGAGCTCGTGTCTGGATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CTGCTTCTTCTTCATGACCTTGAGGATTTTCTTGTCTaGTCGCTCTTTGGCTGTCATCAGGCACTTGGTGAC +
Preference number: 6 (lower is better)
Translates to: LLLLHDLEDFLV*SLFGCHQALGD
Trigger: GTCACCAAGTGCCTGATGACAGCCAAAGAGCGATCAGACAAGAAAATCCTCAAGGTCATGAAGAAGAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108659.2
CDS GCA 72 bp TTTGTCCAGTTCTGTGATATTATCCCAGTAGGCATCTaGCAGCCAACTGGTACATGGATTGTCCATTTGGCC +
Preference number: 6 (lower is better)
Translates to: FVQFCDIIPVGI*QPTGTWIVHLA
Trigger: GGCCAAATGGACAATCCATGTACCAGTTGGCTGGCAGATGCCTACTGGGATAATATCACAGAACTGGACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CTTATACTTGGCAGGCTTGGAGCAGTGGGTAAACTGTaGCTCTGTCATCAGCTGATAAAGACGTGTCATGTT +
Preference number: 6 (lower is better)
Translates to: LILGRLGAVGKL*LCHQLIKTCHV
Trigger: AACATGACACGTCTTTATCAGCTGATGACAGAGGCACAGTTTACCCACTGCTCCAAGCCTGCCAAGTATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TGGGGTTCACGTAGTATTCATACACTGTGTCCTTATTaGGAAAGGAGCCCTCGATTTCTCGAAGGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: WGSRSIHTLCPY*ERSPRFLEGSC
Trigger: ACAGCTACCTTCGAGAAATCGAGGGCTCCTTTCCCAATAAGGACACAGTGTATGAATACTACGTGAACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GGAGCTTCTCCTCAAATGACGTCCAAGTCCGCATCTTaGGGTTCACGTAGTATTCATACACTGTGTCCTTAT +
Preference number: 6 (lower is better)
Translates to: GASPQMTSKSAS*GSRSIHTLCPY
Trigger: ATAAGGACACAGTGTATGAATACTACGTGAACCCCAAGATGCGGACTTGGACGTCATTTGAGGAGAAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCCCGAGGGTACTGCTCAAAGGAGTTCATGAGCCCATaGAAGTTGGTCAGTTTGTCCAGTTCTGTGATATTA +
Preference number: 6 (lower is better)
Translates to: SRGYCSKEFMSP*KLVSLSSSVIL
Trigger: TAATATCACAGAACTGGACAAACTGACCAACTTCCATGGGCTCATGAACTCCTTTGAGCAGTACCCTCGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GAGAACAAGATGGTCTTCATCAACTTGTTATATCTCTaGATCTCCTGCAGGAGGACCACATTGAGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: ENKMVFINLLYL*ISCRRTTLSGE
Trigger: CTCCCCACTCAATGTGGTCCTCCTGCAGGAGATCCAGAGATATAACAAGTTGATGAAGACCATCTTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp AACTCAAAGTCTTCTAGAAGGTTGTGTGCCTTCTTCTaGAAGTCATCGGCGGCATGGATAAGGCCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: NSKSSRRLCAFF*KSSAAWIRPVL
Trigger: CAAGACAGGCCTTATCCATGCCGCCGATGACTTCAAGAAGAAGGCACACAACCTTCTAGAAGACTTTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GCAATATTTTGTAATCCCACTTCTATGGCCAGCTCTTaGGTCGCAGAGGCTGAGATCTCTGCAATCTTCTCC +
Preference number: 6 (lower is better)
Translates to: AIFCNPTSMASS*VAEAEISAIFS
Trigger: GGAGAAGATTGCAGAGATCTCAGCCTCTGCGACCAAAGAGCTGGCCATAGAAGTGGGATTACAAAATATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TCTTTGTTCATTCGGTCCATGATGGCTTTCCAGTTGTaGTTGACCTGGTCAAATAGGGCTGACTCATTGGGC +
Preference number: 6 (lower is better)
Translates to: SLFIRSMMAFQL*LTWSNRADSLG
Trigger: GCCCAATGAGTCAGCCCTATTTGACCAGGTCAACAACAACTGGAAAGCCATCATGGACCGAATGAACAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp ATTGACACCTTGAGGATTTTCTTGTCTGATCGCTCTTaGGCTGTCATCAGGCACTTGGTGACATCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: IDTLRIFLSDRS*AVIRHLVTSAV
Trigger: GACAGCTGATGTCACCAAGTGCCTGATGACAGCCAAAGAGCGATCAGACAAGAAAATCCTCAAGGTGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035539.12
CDS CAA 72 bp CAGCCGACCAGAGTTCCCCAAGTACTCATAACCATATaGGAATTGTGTGTTGGTCTGGCGGATTATACAGTC +
Preference number: 6 (lower is better)
Translates to: QPTRVPQVLITI*ELCVGLADYTV
Trigger: GACTGTATAATCCGCCAGACCAACACACAATTCCAATATGGTTATGAGTACTTGGGGAACTCTGGTCGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TTTAGCACAGGCGGTTCAATGAATCGAGAGCCAAGGTaGGACACGATGAAGGAAGTAACACAGAATGCCACT +
Preference number: 6 (lower is better)
Translates to: FSTGGSMNREPR*DTMKEVTQNAT
Trigger: AGTGGCATTCTGTGTTACTTCCTTCATCGTGTCCAACCTTGGCTCTCGATTCATTGAACCGCCTGTGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TTCATGACCTTGAGGATTTTCTTGTCTGATCGCTCTTaGGCTGTCATCAGGCACTTGGTGACATCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: FMTLRIFLSDRS*AVIRHLVTSAV
Trigger: GACAGCTGATGTCACCAAGTGCCTGATGACAGCCAAAGAGCGATCAGACAAGAAAATCCTCAAGGTCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108659.2
CDS CAA 72 bp GACACCTGCTTCTTCTTCATGACCTTGAGGATTTTCTaGTCTGATCGCTCTTTGGCTGTCATCAGGCACTTG +
Preference number: 6 (lower is better)
Translates to: DTCFFFMTLRIF*SDRSLAVIRHL
Trigger: CAAGTGCCTGATGACAGCCAAAGAGCGATCAGACAAGAAAATCCTCAAGGTCATGAAGAAGAAGCAGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108659.2
CDS CCA 72 bp GCACATTCTGGAGTAGCACTGGAAATCCAAACTGGATaGCATGTTCTAGAACTCGAAGGTAGTCATGCATCT +
Preference number: 6 (lower is better)
Translates to: AHSGVALEIQTG*HVLELEGSHAS
Trigger: AGATGCATGACTACCTTCGAGTTCTAGAACATGCCATCCAGTTTGGATTTCCAGTGCTACTCCAGAATGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp ATCGTCACCAGAGCCACAATCTTAAGTCTCATGATCTaGGTCAAGTTCCCCCTGATGGCCTCTGAATACTTA +
Preference number: 6 (lower is better)
Translates to: IVTRATILSLMI*VKFPLMASEYL
Trigger: TAAGTATTCAGAGGCCATCAGGGGGAACTTGACCAAGATCATGAGACTTAAGATTGTGGCTCTGGTGACGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TCATTCAACAAGCGCAGGATCTCATCCTCTAGTTCTTaGAGCTTTCTCTTTCCTGCAGCGATGTTGATGACC +
Preference number: 6 (lower is better)
Translates to: SFNKRRISSSSS*SFLFPAAMLMT
Trigger: GGTCATCAACATCGCTGCAGGAAAGAGAAAGCTCAAAGAACTAGAGGATGAGATCCTGCGCTTGTTGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TTATTTAGTATTGACACCTTGAGGATTTTCTTGTCTGATCGCTCTTaGGCTGTCATCAGGCACTTGGTGACATCAGCTGTCCACTGGATC +
Preference number: 6 (lower is better)
Translates to: LFSIDTLRIFLSDRS*AVIRHLVTSAVHWI
Trigger: GATCCAGTGGACAGCTGATGTCACCAAGTGCCTGATGACAGCCAAAGAGCGATCAGACAAGAAAATCCTCAAGGTGTCAATACTAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035539.12
CDS CAA 90 bp CCTAGTTTCGTCAATCTTAAACAATCCAGTTCGAAGCTTATTGGCTaGGTCCAGCAGCTCCTGCCGCTTTTCTCCCAGAAGCTTTTTATA +
Preference number: 6 (lower is better)
Translates to: PSFVNLKQSSSKLIG*VQQLLPLFSQKLFI
Trigger: TATAAAAAGCTTCTGGGAGAAAAGCGGCAGGAGCTGCTGGACCAAGCCAATAAGCTTCGAACTGGATTGTTTAAGATTGACGAAACTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS TCA 72 bp CCAGATTTATTTCAAAGCCCTCAAAATAGAAACGTGTaGGGTTGGCAGTCAAGGCAGATAGGATGGACAGGA +
Preference number: 6 (lower is better)
Translates to: PDLFQSPQNRNV*GWQSRQIGWTG
Trigger: TCCTGTCCATCCTATCTGCCTTGACTGCCAACCTCACACGTTTCTATTTTGAGGGCTTTGAAATAAATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp CCAAGGAAGATATTCTCTAGGTACATCCACTGTCTCTaGACAGTGAGGACCATCTCAATAACTTCCAGAATG +
Preference number: 6 (lower is better)
Translates to: PRKIFSRYIHCL*TVRTISITSRM
Trigger: CATTCTGGAAGTTATTGAGATGGTCCTCACTGTGCAGAGACAGTGGATGTACCTAGAGAATATCTTCCTTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS GCA 72 bp TCTTTATCAAAGTTGATCAATGACTTGATGAAGTTCTaGTCCCCTAACTGTCGCTTTGCTTCTGCCCACGTG +
Preference number: 6 (lower is better)
Translates to: SLSKLINDLMKF*SPNCRFASAHV
Trigger: CACGTGGGCAGAAGCAAAGCGACAGTTAGGGGAGCAGAACTTCATCAAGTCATTGATCAACTTTGATAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp GATATATTCTTTGTAAGAGGCCAAGCTCCCGTCCTTTaGGATGTAATAAGTGTCCAGTACAGACAACCGGTA +
Preference number: 6 (lower is better)
Translates to: DIFFVRGQAPVL*DVISVQYRQPV
Trigger: TACCGGTTGTCTGTACTGGACACTTATTACATCCCAAAGGACGGGAGCTTGGCCTCTTACAAAGAATATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp CTCTTGGAAGGTTTTTCGAACCATTTCATCAATGGCTaGAGCCATCTGCTGATAGGTATGTATGCTCTCCTC +
Preference number: 6 (lower is better)
Translates to: LLEGFSNHFING*SHLLIGMYALL
Trigger: GAGGAGAGCATACATACCTATCAGCAGATGGCTCAAGCCATTGATGAAATGGTTCGAAAAACCTTCCAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TTGTCTTTGTTCATTCGGTCCATGATGGCTTTCCAGTaGTTGTTGACCTGGTCAAATAGGGCTGACTCATTG +
Preference number: 6 (lower is better)
Translates to: LSLFIRSMMAFQ*LLTWSNRADSL
Trigger: CAATGAGTCAGCCCTATTTGACCAGGTCAACAACAACTGGAAAGCCATCATGGACCGAATGAACAAAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp ACCAGAGTTCCCCAAGTACTCATAACCATATTGGAATaGTGTGTTGGTCTGGCGGATTATACAGTCATCCAC +
Preference number: 6 (lower is better)
Translates to: TRVPQVLITILE*CVGLADYTVIH
Trigger: GTGGATGACTGTATAATCCGCCAGACCAACACACAATTCCAATATGGTTATGAGTACTTGGGGAACTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp GGGAACCTGAAGCTCCCTGATCTTCCTGATCCAGATTaGATTGATAATCTCATCCCGGTAATTGGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: GNLKLPDLPDPD*IDNLIPVIGQK
Trigger: TTTCTGACCAATTACCGGGATGAGATTATCAATCAAATCTGGATCAGGAAGATCAGGGAGCTTCAGGTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp TTTAGTATTGACACCTGCTTCTTCTTCATGACCTTGAGGATTTTCTaGTCTGATCGCTCTTTGGCTGTCATCAGGCACTTGGTGACATCA +
Preference number: 6 (lower is better)
Translates to: FSIDTCFFFMTLRIF*SDRSLAVIRHLVTS
Trigger: TGATGTCACCAAGTGCCTGATGACAGCCAAAGAGCGATCAGACAAGAAAATCCTCAAGGTCATGAAGAAGAAGCAGGTGTCAATACTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000108659.2
CDS TCA 72 bp AGAGAGGCCAAAAACCTATGCAGGTGTGAAACAAAATaGTTCCGGATGCTCTCAGGCCAAGACTTATTCATA +
Preference number: 6 (lower is better)
Translates to: REAKNLCRCETK*FRMLSGQDLFI
Trigger: TATGAATAAGTCTTGGCCTGAGAGCATCCGGAATCATTTTGTTTCACACCTGCATAGGTTTTTGGCCTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCCACTCTTGGAAGGTTTTTCGAACCATTTCATCAATaGCTTGAGCCATCTGCTGATAGGTATGTATGCTCT +
Preference number: 6 (lower is better)
Translates to: STLGRFFEPFHQ*LEPSADRYVCS
Trigger: AGAGCATACATACCTATCAGCAGATGGCTCAAGCCATTGATGAAATGGTTCGAAAAACCTTCCAAGAGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CCA 72 bp TCCCCAAGTACTCATAACCATATTGGAATTGTGTGTTaGTCTGGCGGATTATACAGTCATCCACATCCTTCT +
Preference number: 6 (lower is better)
Translates to: SPSTHNHIGIVC*SGGLYSHPHPS
Trigger: AGAAGGATGTGGATGACTGTATAATCCGCCAGACCAACACACAATTCCAATATGGTTATGAGTACTTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp AATACCTTATCTGAGATGTTGTCTTTATCAAAGTTGATCAATGACTaGATGAAGTTCTGCTCCCCTAACTGTCGCTTTGCTTCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: NTLSEMLSLSKLIND*MKFCSPNCRFASAH
Trigger: GTGGGCAGAAGCAAAGCGACAGTTAGGGGAGCAGAACTTCATCAAGTCATTGATCAACTTTGATAAAGACAACATCTCAGATAAGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TCTGAGATGTTGTCTTTATCAAAGTTGATCAATGACTaGATGAAGTTCTGCTCCCCTAACTGTCGCTTTGCT +
Preference number: 6 (lower is better)
Translates to: SEMLSLSKLIND*MKFCSPNCRFA
Trigger: AGCAAAGCGACAGTTAGGGGAGCAGAACTTCATCAAGTCATTGATCAACTTTGATAAAGACAACATCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 90 bp CCGATCTTCTTCAATACCTTATCTGAGATGTTGTCTTTATCAAAGTaGATCAATGACTTGATGAAGTTCTGCTCCCCTAACTGTCGCTTT +
Preference number: 6 (lower is better)
Translates to: PIFFNTLSEMLSLSK*INDLMKFCSPNCRF
Trigger: AAAGCGACAGTTAGGGGAGCAGAACTTCATCAAGTCATTGATCAACTTTGATAAAGACAACATCTCAGATAAGGTATTGAAGAAGATCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2
CDS CAA 72 bp TTCAATACCTTATCTGAGATGTTGTCTTTATCAAAGTaGATCAATGACTTGATGAAGTTCTGCTCCCCTAAC +
Preference number: 6 (lower is better)
Translates to: FNTLSEMLSLSK*INDLMKFCSPN
Trigger: GTTAGGGGAGCAGAACTTCATCAAGTCATTGATCAACTTTGATAAAGACAACATCTCAGATAAGGTATTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035539.12
ENSMUST00000108659.2