RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH17 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033987

Ensembl transcript IDs: ENSMUST00000084803.12, ENSMUST00000106308.10, ENSMUST00000132685.9

Found 1577 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGGACCGGCACAAGTACGAGGTGGGGAGGGCCCTAGTCTGTACTaGTGCTGCCCTACTGCAGGCAGGAGAAACCCGGGACCCCAGAGC +
Preference number: 1 (lower is better)
Translates to: VGPAQVRGGEGPSLY*CCPTAGRRNPGPQS
Trigger: GCTCTGGGGTCCCGGGTTTCTCCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTACTTGTGCCGGTCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 90 bp CCGGCACAAGTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTaGCCTACTGCAGGCAGGAGAAACCCGGGACCCCAGAGCACAGCA +
Preference number: 1 (lower is better)
Translates to: PAQVRGGEGPSLYCC*PTAGRRNPGPQSTA
Trigger: TGCTGTGCTCTGGGGTCCCGGGTTTCTCCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTACTTGTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 90 bp GGACCGGCACAAGTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTaGTGCCCTACTGCAGGCAGGAGAAACCCGGGACCCCAGAGCACA +
Preference number: 1 (lower is better)
Translates to: GPAQVRGGEGPSLYC*CPTAGRRNPGPQST
Trigger: TGTGCTCTGGGGTCCCGGGTTTCTCCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTACTTGTGCCGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 90 bp CAGATACCAGGGCCTCTTCCCTTAGGTGACTGTCCTTCAGGCGCCTaGTCCCAGATCAGACAGGCTGGGGTGGGGCAGTGCCCAAGGAGC +
Preference number: 1 (lower is better)
Translates to: QIPGPLPLGDCPSGA*SQIRQAGVGQCPRS
Trigger: GCTCCTTGGGCACTGCCCCACCCCAGCCTGTCTGATCTGGGACCAGGCGCCTGAAGGACAGTCACCTAAGGGAAGAGGCCCTGGTATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 90 bp GCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGTGTaGTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCT +
Preference number: 1 (lower is better)
Translates to: AVCREHLMPWLWHFV*CTLTPPPACASQVP
Trigger: AGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTaGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCG +
Preference number: 1 (lower is better)
Translates to: SVDAAVCREHLMPWL*HFVCCTLTPPPACA
Trigger: CGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR TCA 90 bp TACTGCAGGCAGGAGAAACCCGGGACCCCAGAGCACAGCATGTGGTaGCAGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATG +
Preference number: 1 (lower is better)
Translates to: YCRQEKPGTPEHSMW*QLLLSLLCGKGGCM
Trigger: CATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCTCCTGCCTGCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 90 bp GCCCTGGCTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTaGTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTCAG +
Preference number: 1 (lower is better)
Translates to: ALAVALCVLYPDPTS*LREPSSWAPESQIQ
Trigger: CTGAATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAGCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTaGCTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCT +
Preference number: 1 (lower is better)
Translates to: ELSVDAAVCREHLMP*LWHFVCCTLTPPPA
Trigger: AGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 90 bp GTGACTGTCCTTCAGGCGCCTGGTCCCAGATCAGACAGGCTGGGGTaGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAG +
Preference number: 1 (lower is better)
Translates to: VTVLQAPGPRSDRLG*GSAQGAELCFATLK
Trigger: CTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAGCCTGTCTGATCTGGGACCAGGCGCCTGAAGGACAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 90 bp TGGCTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTaGGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTT +
Preference number: 1 (lower is better)
Translates to: WLWHFVCCTLTPPPA*ASQVPGLLKVRFRV
Trigger: AACCCTGAATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 90 bp TTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTaGCTTTTTCAGTTCTGGGACAGCAGTTGGGAAGGCAGGCATGGG +
Preference number: 1 (lower is better)
Translates to: LLCGKGGCMAPVCHG*LFQFWDSSWEGRHG
Trigger: CCCATGCCTGCCTTCCCAACTGCTGTCCCAGAACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR TCA 90 bp TGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTaGAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAG +
Preference number: 1 (lower is better)
Translates to: WGGAVPKELSFALQL*RLRNPESDILPYRE
Trigger: CTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 90 bp GCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCTGGGACAGCAGTTaGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTT +
Preference number: 1 (lower is better)
Translates to: APVCHGWLFQFWDSS*EGRHGDYCRLLFIL
Trigger: AAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCCAACTGCTGTCCCAGAACTGAAAAAGCCAGCCGTGACAGACAGGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 90 bp GAAAAATTCACTTTGTGTTATTACCAAGGATTGGAACAAGTTGCCTaGAGCCTGCTGGCTGTGCCACATGAGGGAGCTACAGTGACCCCT +
Preference number: 1 (lower is better)
Translates to: EKFTLCYYQGLEQVA*SLLAVPHEGATVTP
Trigger: AGGGGTCACTGTAGCTCCCTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACACAAAGTGAATTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR TCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGTTGTGTGCTGTACCCTaGCCCCACCTCCTGCTTGCG +
Preference number: 2 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRLCAVP*PHLLLA
Trigger: CGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAA...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR TCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTTGTGTGCTGTACCCTaGCCCCACCTCCTGCTTGCG +
Preference number: 2 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWLCAVP*PHLLLA
Trigger: CGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CAA 90 bp CTGGCTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTaGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTCAGGGT +
Preference number: 2 (lower is better)
Translates to: LAVALCVLYPDPTSC*REPSSWAPESQIQG
Trigger: ACCCTGAATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGTGGCTCCTTAGCTGCTaGGAATCAGGCTTCACTGCT +
Preference number: 2 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWWLLSC*ESGFTA
Trigger: AGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCA...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR TCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTTGTGGCATTGGGAACTaGGTGCATCAGACGGGCACA +
Preference number: 2 (lower is better)
Translates to: LGWGSAQGAELCFATLKACGIGN*VHQTGT
Trigger: TGTGCCCGTCTGATGCACTCAGTTCCCAATGCCACA...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCTGTGGCACTTTGTGTaGTGTACCCTGACCCCACCT +
Preference number: 2 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCLWHFV*CTLTPP
Trigger: AGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCAGGCATGGGGATTACTaGAGGCTCTTGTTTATTCTT +
Preference number: 2 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTRHGDY*RLLFIL
Trigger: AAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCT...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTAGTCTGTACTGCTGCTaGCCTACTGCAGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: VERGCSLLCLRGVSVHACSLYCC*PTAGRR
Trigger: TCTCCTGCCTGCAGTAGGGCAGCAGCAGTACAGACT...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTCCGAGGGGTGTCTGTaGATGCCTGTGTGCATGTTA +
Preference number: 2 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPSEGCL*MPVCML
Trigger: TAACATGCACACAGGCATGCACAGACACCCCTCGGA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGGCCAGCAGAGGCAGTaGACAGCAGCTAGGGTTCCC +
Preference number: 2 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEGQQRQ*TAARVP
Trigger: GGGAACCCTAGCTGCTGTGCACTGCCTCTGCTGGCC...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAACTTCACTGCTGTGTGTaGCATTGGGAACTGAGTGCA +
Preference number: 2 (lower is better)
Translates to: LWHFVCCTLTPPPACASQLHCCV*HWELSA
Trigger: TGCACTCAGTTCCCAATGCCACACACAGCAGTGAAG...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCTGCTGGCTCCTTAGCTaGTGGGAATCAGGCTTCACT +
Preference number: 2 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCCWLLS*WESGFT
Trigger: AGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCA...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGCTCAGCCCACCTGTCTaGCCATCATCACTAGGGGCG +
Preference number: 2 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHELSPPV*PSSLGA
Trigger: CGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAG...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR TCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGGCTCTTGTTTATTCTTaGGCTCAGTGTAGATGCTGC +
Preference number: 2 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWALVYS*AQCRCC
Trigger: GCAGCATCTACACTGAGCTCAAGAATAAACAAGAGC...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR TCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAAGTTCCTGGGCTCCTaGAAGTCAGATTCAGGGTTT +
Preference number: 2 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFKFLGS*KSDSGF
Trigger: AAACCCTGAATCTGACTTTCAGGAGCCCAGGAACTT...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR TCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGAGCACAGCATGTGGTaGCAGCTCCTGCTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEEHSMW*QLLLSL
Trigger: TAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTC...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCCTCAGCCCACCTGTCTaGCCATCATCACTAGGGGCG +
Preference number: 2 (lower is better)
Translates to: CNFEGLETQKVISCPTGSLSPPV*PSSLGA
Trigger: CGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAG...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAATAGCCCAGGAGCACTaGGTTTGTAAGAAGTCAAAA +
Preference number: 2 (lower is better)
Translates to: LWHFVCCTLTPPPACASQIAQEH*VCKKSK
Trigger: TTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTAT...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCGGAAGGGTGGCTGCATaGCACCTGTCTGTCACGGCT +
Preference number: 2 (lower is better)
Translates to: CNFEGLETQKVISCPTGSGRVAA*HLSVTA
Trigger: AGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCC...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGCTGTTGAAAGGGGTTaGAGTCTGCTGTGTCTCCGA +
Preference number: 2 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEAVERG*SLLCLR
Trigger: TCGGAGACACAGCAGACTGCAACCCCTTTCAACAGC...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGTTGGGAAGGCAGGCATaGGGATTACTGCAGGCTCTT +
Preference number: 2 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHELGRQA*GLLQAL
Trigger: AAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCCAA...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR TCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCGAGCACAGCATGTGGTaGCAGCTCCTGCTGTCCTTA +
Preference number: 2 (lower is better)
Translates to: CNFEGLETQKVISCPTGSEHSMW*QLLLSL
Trigger: TAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTC...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCATAGCCCAGGAGCACTaGGTTTGTAAGAAGTCAAAA +
Preference number: 2 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFIAQEH*VCKKSK
Trigger: TTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTAT...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGGAATCAGGCTTCACTaGTGTGTGTGGCATTGGGAA +
Preference number: 2 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHGIRLH*CVWHWE
Trigger: TTCCCAATGCCACACACAGCAGTGAAGCCTGATTCC...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCCTTCACTGCTGTGTGTaGCATTGGGAACTGAGTGCA +
Preference number: 2 (lower is better)
Translates to: CNFEGLETQKVISCPTGSLHCCV*HWELSA
Trigger: TGCACTCAGTTCCCAATGCCACACACAGCAGTGAAG...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR TCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGTTTGCTTTGCAACTTTaGAGGCTTAGAAACCCAGAA +
Preference number: 2 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEFALQL*RLRNPE
Trigger: TTCTGGGTTTCTAAGCCTTCAAAGTTGCAAAGCAAA...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGACGGGCACAATGATTaGAAGCATTTTAATCTGTAC +
Preference number: 2 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEDGHND*KHFNLY
Trigger: GTACAGATTAAAATGCTTGCAATCATTGTGCCCGTC...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGGACGGGCACAATGATTaGAAGCATTTTAATCTGTAC +
Preference number: 2 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVDGHND*KHFNLY
Trigger: GTACAGATTAAAATGCTTGCAATCATTGTGCCCGTC...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCAGGCATGGGGATTACTaGAGGCTCTTGTTTATTCTT +
Preference number: 2 (lower is better)
Translates to: CNFEGLETQKVISCPTGSRHGDY*RLLFIL
Trigger: AAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCT...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CAA 90 bp TCAAAGGCAAAATTAGAAAAATTCACTTTGTGTTATTACCAAGGATaGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGGA +
Preference number: 2 (lower is better)
Translates to: SKAKLEKFTLCYYQG*EQVAWSLLAVPHEG
Trigger: TCCCTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACACAAAGTGAATTTTTCTAATTTTGCCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTaGCCTACTGCAGGCAGGAGAAACCCGGGACCCCAG +
Preference number: 3 (lower is better)
Translates to: VRGGEGPSLYCC*PTAGRRNPGPQ
Trigger: CTGGGGTCCCGGGTTTCTCCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp AGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGTGTaGTGTACCCTGACCCCACCTCCTGCTTGCGCGAGC +
Preference number: 3 (lower is better)
Translates to: REHLMPWLWHFV*CTLTPPPACAS
Trigger: GCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAGCCAGGGCATCAGGTGCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp CAAGTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTaGTGCCCTACTGCAGGCAGGAGAAACCCGGGACCC +
Preference number: 3 (lower is better)
Translates to: QVRGGEGPSLYC*CPTAGRRNPGP
Trigger: GGGTCCCGGGTTTCTCCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp TCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTaGAGGGTGTGTGTGACTAGGTGGGGTGGGACCGGC +
Preference number: 3 (lower is better)
Translates to: STQPPHSWVWSI*RVCVTRWGGTG
Trigger: GCCGGTCCCACCCCACCTAGTCACACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp CCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTaGTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGG +
Preference number: 3 (lower is better)
Translates to: PGPQSTACGDSS*CPYSVGRVAAW
Trigger: CCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp GCACAAGTACGAGGTGGGGAGGGCCCTAGTCTGTACTaGTGCTGCCCTACTGCAGGCAGGAGAAACCCGGGA +
Preference number: 3 (lower is better)
Translates to: AQVRGGEGPSLY*CCPTAGRRNPG
Trigger: TCCCGGGTTTCTCCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTACTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp GCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTaGCACTTTGTGTGCTGTACCCTGACCCCACCTCCT +
Preference number: 3 (lower is better)
Translates to: AAVCREHLMPWL*HFVCCTLTPPP
Trigger: AGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp CTTCAGGCGCCTGGTCCCAGATCAGACAGGCTGGGGTaGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCA +
Preference number: 3 (lower is better)
Translates to: LQAPGPRSDRLG*GSAQGAELCFA
Trigger: TGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAGCCTGTCTGATCTGGGACCAGGCGCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR TCA 72 bp CCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTGTaGCTAGGTGGGGTGGGACCGGCACAAGTACGAGGT +
Preference number: 3 (lower is better)
Translates to: PTAGSGAFAGCV*LGGVGPAQVRG
Trigger: ACCTCGTACTTGTGCCGGTCCCACCCCACCTAGTCACACACACCCTGCAAATGCTCCAGACCCAGCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CAA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGTTCTGGGACAGCAGTaGGGAAGGCAGGCATGGGGA +
Preference number: 3 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYVLGQQ*GRQAWG
Trigger: TCCCCATGCCTGCCTTCCCAACTGCTGTCCCAGAAC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp GTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTaGTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGT +
Preference number: 3 (lower is better)
Translates to: VALCVLYPDPTS*LREPSSWAPES
Trigger: ACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp CACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTaGCGCCTGTTTGTAGCCTGGGTGCCTTGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: HPWCPLAYLPMS*RLFVAWVPCCV
Trigger: CACACAGCAAGGCACCCAGGCTACAAACAGGCGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp GTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTaGCTGTGGCACTTTGTGTGCTGTACCCTGACCCCA +
Preference number: 3 (lower is better)
Translates to: VDAAVCREHLMP*LWHFVCCTLTP
Trigger: TGGGGTCAGGGTACAGCACACAAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp GGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTaGCTTTTTCAGTTCTGGGACAGCAGTTGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: GKGGCMAPVCHG*LFQFWDSSWEG
Trigger: GCCTTCCCAACTGCTGTCCCAGAACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp CAGCATGTGGTGACAGCTCCTGCTGTCCTTACTCTGTaGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGG +
Preference number: 3 (lower is better)
Translates to: QHVVTAPAVLTL*EGWLHGTCLSR
Trigger: CCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCTGTCACCACATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp GAACCAAGGTCCACACAGCCACCCCACAGCTGGGTCTaGAGCATTTGCAGGGTGTGTGTGACTAGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: EPRSTQPPHSWV*SICRVCVTRWG
Trigger: ACCCCACCTAGTCACACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp GGTGGAGAACCAAGGTCCACACAGCCACCCCACAGCTaGGTCTGGAGCATTTGCAGGGTGTGTGTGACTAGG +
Preference number: 3 (lower is better)
Translates to: GGEPRSTQPPHS*VWSICRVCVTR
Trigger: CCTAGTCACACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGGTTCTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp GGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTaGATGCCTGTGTGCATGTTAGGTGGAGAACCAAGG +
Preference number: 3 (lower is better)
Translates to: GVAVCCVSEGCL*MPVCMLGGEPR
Trigger: CCTTGGTTCTCCACCTAACATGCACACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp GTGACAGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTaGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTT +
Preference number: 3 (lower is better)
Translates to: VTAPAVLTLWEG*LHGTCLSRLAF
Trigger: AAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp GAGCTAGAGGCTTTGCTGGCTGTTTCCCATCACCCCTaGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGC +
Preference number: 3 (lower is better)
Translates to: ELEALLAVSHHP*CPLAYLPMSCR
Trigger: GCGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAGCAAAGCCTCTAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCTGCTGTGTGTGGCATaGGGAACTGAGTGCATCAGA +
Preference number: 3 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCLLCVA*GTECIR
Trigger: TCTGATGCACTCAGTTCCCAATGCCACACACAGCAG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGAGTCAGATTCAGGGTTaGTTTCCCAGGATGCTGGCT +
Preference number: 3 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPSQIQG*FPRMLA
Trigger: AGCCAGCATCCTGGGAAACAAACCCTGAATCTGACT...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp AGGGTTTGTTTCCCAGGATGCTGGCTCCTTAGCTGCTaGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGG +
Preference number: 3 (lower is better)
Translates to: RVCFPGCWLLSC*ESGFTAVCGIG
Trigger: CCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAAACAAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp TCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATaGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCT +
Preference number: 3 (lower is better)
Translates to: SCCPYSVGRVAA*HLSVTAGFFSS
Trigger: AGAACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAAGAGGGAGGGCTGTaGAAAGGGGTTGCAGTCTGC +
Preference number: 3 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHEEGGL*KGVAVC
Trigger: GCAGACTGCAACCCCTTTCAACAGCCCTCCCTCTTC...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp TTCAGGGTTTGTTTCCCAGGATGCTGGCTCCTTAGCTaGTGGGAATCAGGCTTCACTGCTGTGTGTGGCATT +
Preference number: 3 (lower is better)
Translates to: FRVCFPGCWLLS*WESGFTAVCGI
Trigger: AATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAAACAAACCCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR TCA 72 bp CAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTaGGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCA +
Preference number: 3 (lower is better)
Translates to: QAWGLLQALVYS*AQCRCCCVQGA
Trigger: TGCTCCCTGCACACAGCAGCATCTACACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp CTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATaGTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACT +
Preference number: 3 (lower is better)
Translates to: LLKVRFRVCFPG*WLLSCWESGFT
Trigger: AGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR GCA 72 bp TTGTTTATTCTTGAGCTCAGTGTAGATGCTGCTGTGTaGAGGGAGCACCTGATGCCCTGGCTGTGGCACTTT +
Preference number: 3 (lower is better)
Translates to: LFILELSVDAAV*REHLMPWLWHF
Trigger: AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTCAAGAATAAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp CTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTaGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCT +
Preference number: 3 (lower is better)
Translates to: LKVRFRVCFPGC*LLSCWESGFTA
Trigger: AGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATAGTCAGATTCAGGGTTaGTTTCCCAGGATGCTGGCT +
Preference number: 3 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHSQIQG*FPRMLA
Trigger: AGCCAGCATCCTGGGAAACAAACCCTGAATCTGACT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR TCA 72 bp GAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTaGGTGCATCAGACGGGCACAATGATTGCAAGCATT +
Preference number: 3 (lower is better)
Translates to: ESGFTAVCGIGN*VHQTGTMIASI
Trigger: AATGCTTGCAATCATTGTGCCCGTCTGATGCACTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CCA 72 bp ACTTTGTGTTATTACCAAGGATTGGAACAAGTTGCCTaGAGCCTGCTGGCTGTGCCACATGAGGGAGCTACA +
Preference number: 3 (lower is better)
Translates to: TLCYYQGLEQVA*SLLAVPHEGAT
Trigger: TGTAGCTCCCTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACACAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCGCTTCCTCCAGGGCCTaGCTCTTGGGCGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTASSRA*LLGATS
Trigger: CGACGTGGCGCCCAAGAGGCAGGCCCTGGAGGAAGC...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGGCTTCCTCCAGGGCCTaGCTCTTGGGCGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRASSRA*LLGATS
Trigger: CGACGTGGCGCCCAAGAGGCAGGCCCTGGAGGAAGC...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGCGGATGGCGGGGTTCTaGAGCTCGCTCACAGCACGC +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRRMAGF*SSLTAR
Trigger: GCGTGCTGTGAGCGAGCTGCAGAACCCCGCCATCCG...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCCGGGCAAGCCGATTGTaGCCAGGCTACCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTRASRL*PGYPLS
Trigger: GCTCAGAGGGTAGCCTGGGCACAATCGGCTTGCCCG...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCCGCTGGATGAGTGGCTaGCCCAGGTTGAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTRWMSG*PRLKWQ
Trigger: CTGCCACTTCAACCTGGGGCAGCCACTCATCCAGCG...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCGCCTGCATGAGCTGTTaGCAGTGGCGGTCACGGATG +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTACMSC*QWRSRM
Trigger: CATCCGTGACCGCCACTGGCAACAGCTCATGCAGGC...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTGCCAGTGCCCGCGTTaGCCACCAGCATCACGGGCC +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWCQCPR*PPASRA
Trigger: GGCCCGTGATGCTGGTGGGCAACGCGGGCACTGGCA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGGGCTCTGCTTCCCACTaGCACCCACGCCCACCAACA +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRGSASH*HPRPPT
Trigger: TGTTGGTGGGCGTGGGTGGCAGTGGGAAGCAGAGCC...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCGGCTGTCGAAGAGCTTaGACAGGTGGCGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTGCRRA*TGGGSP
Trigger: AGGTGAGCCGCCACCTGTCCAAGCTCTTCGACAGCC...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTTTCGTGGCGCAACGTaGCGCGCATTCGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTFRGAT*RAFGPA
Trigger: TGCTGGACCGAATGCGCGCCACGTTGCGCCACGAAA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCCATGGAGTCCAGCGTaGCGTCCAGGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWPWSPA*RPGCPG
Trigger: ACCTGGGCAGCCTGGACGGCACGCTGGACTCCATGG...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCGGATGGCGGGGTTCTaGAGCTCGCTCACAGCACGC +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCRMAGF*SSLTAR
Trigger: GCGTGCTGTGAGCGAGCTGCAGAACCCCGCCATCCG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCCCAGCCGAGGTGTGTTaGCCAGGTACTCGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTPAEVC*PGTRRS
Trigger: ACTCCTACGAGTACCTGGGCAACACACCTCGGCTGG...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACTCTCCGTCTTGCCCGTaGCAGCAGGGCCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYSPSCP*QQGLQG
Trigger: CCCCTGCAGGCCCTGCTGGCACGGGCAAGACGGAGA...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGGAGCACCTGGTCCTCTaGCCGGGTGGGGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPEHLVL*PGGVSP
Trigger: AGGGGAGACCCCACCCGGGCAGAGGACCAGGTGCTC...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAAGGCGCGAGAGGCTCTaGTTCCCACTGCCACCCACG +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQRRERL*FPLPPT
Trigger: CGTGGGTGGCAGTGGGAAGCAGAGCCTCTCGCGCCT...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGAGGGGATCCTCTCCATaGAGTCCAGCGTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRRGSSP*SPACRP
Trigger: TGGACGGCACGCTGGACTCCATGGAGAGGATCCCCT...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGCAGCTTCTTAGTGCCTaGGGGGCCGTAGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRQLLSA*GAVVPP
Trigger: GGGAGGAACTACGGCCCCCCAGGCACTAAGAAGCTG...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAGAGGTGAGGGCCTCCTaGCCGGGGAAGCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQEVRAS*PGKLTA
Trigger: TGCTGTGAGCTTCCCCGGCCAGGAGGCCCTCACCTC...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCCTGCCAGGCCCATCATaGAGGGGTAGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVLPGPS*RGRPGP
Trigger: TGGCCCGGGCCTACCCCTCCATGATGGGCCTGGCAG...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGGCTCCAGGCTCCACTTaGGCTGCCCAGACACGGGAG +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPAPGST*AAQTRE
Trigger: CTCCCGTGTCTGGGCAGCTCAAGTGGAGCCTGGAGC...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGGTGGCTGCCCCAGGTTaGAGTGGCAGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWVAAPG*SGSPGP
Trigger: TGGACCAGGACTGCCACTTCAACCTGGGGCAGCCAC...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCCTGAGTGGCCTGCATaGGCTGTTGCCAGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCPEWPA*AVASGG
Trigger: ACCGCCACTGGCAACAGCTCATGCAGGCCACTCAGG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAGCTGCGACTGCCAGGTaGAGGCCTGCGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQAATAR*RPANSP
Trigger: TGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGC...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCCACCAGCACAGACTTaGTGGCCCGAAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWPPAQT*WPEGPS
Trigger: ACTGGGGCCTTCGGGCCATCAAGTCTGTGCTGGTGG...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCGCCGATCAGCCCCATaGACACGGGCAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCRRSAP*TRAGHQ
Trigger: CTGATGACCTGCCCGTGTTCATGGGGCTGATCGGCG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGTGGCCAGGTCCCGCATaGTGGTTGAGAACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRWPGPA*WLRTGH
Trigger: ATGGCCTGTTCTCAACCATCATGCGGGACCTGGCCA...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCCCATGTGCTGGCGGATaGGGGTGTGTGGGGCCACCG +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFPCAGG*GCVGPP
Trigger: CGGTGGCCCCACACACCCTCATCCGCCAGCACATGG...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCGGTATCTGGCCATCTaGAGAGGCCGCCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWRYLAI*RGRHLG
Trigger: GCCCAGATGGCGGCCTCTGCAGATGGCCAGATACCG...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGTCTCCGGCAGCTCCGTaGGCCCTGCGTAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLSPAAP*ALRSQD
Trigger: ATCCTGGCTACGCAGGGCGCACGGAGCTGCCGGAGA...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCACTTGGGACCCTCGTaGGTGAGGTTGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWHLGPS*VRLARS
Trigger: GGACCTGGCCAACCTCACGCACGAGGGTCCCAAGTG...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCTGCCAGTGCCCGCGTTaGCCACCAGCATCACGGGCC +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCCQCPR*PPASRA
Trigger: GGCCCGTGATGCTGGTGGGCAACGCGGGCACTGGCA...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTGCGGTCCGGCCTCATaGAGCGCACCATGCACAGCT +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWCGPAS*SAPCTA
Trigger: AGCTGTGCATGGTGCGCTGCATGAGGCCGGACCGCA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGGGAGCGAGTTGTCCATaGAGGAGGGGATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRGASCP*RRGSSP
Trigger: TGGAGAGGATCCCCTCCTCCATGGACAACTCGCTCC...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGAAGAGCTTGGACAGGTaGCGGCTCACCTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWKSLDR*RLTSTG
Trigger: CCCCGTGGAGGTGAGCCGCCACCTGTCCAAGCTCTT...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCCTAGAGACGGTGGCTaGGGTGGCTGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWPRDGG*GGCPQV
Trigger: CACCTGAGGACAGCCACCCCAGCCACCGTCTCTAGG...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTGCTCGTACAGCTCCTTaGGGGAGTCGGGCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVARTAP*GSRAGR
Trigger: ACGCCCCGCCCGACTCCCCCAAGGAGCTGTACGAGC...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGCCAGGGCCTGCCTCTTaGGCGCCACGTCGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLPGPAS*APRRSR
Trigger: TCTACTGCGACGTGGCGCCCAAGAGGCAGGCCCTGG...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCACAGCCAGCTCGGCGTTaGCTTCCTCCAGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAQPARR*LPPGPA
Trigger: GGCAGGCCCTGGAGGAAGCCAACGCCGAGCTGGCTG...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTCAGCCAGCTCGGCGTTaGCTTCCTCCAGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAQPARR*LPPGPA
Trigger: GGCAGGCCCTGGAGGAAGCCAACGCCGAGCTGGCTG...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGGTTCCTGCCCAGCAGTaGGTCGAGCACGGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWVPAQQ*VEHGVY
Trigger: GTAGACCCCGTGCTCGACCCACTGCTGGGCAGGAAC...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTACAGCGGCCAGGAGCTaGTCCTCCAGCCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQITAARS*SSSPSL
Trigger: CAGAGACGGGCTGGAGGACCAGCTCCTGGCCGCTGT...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTCACAATGTCTTCTaGCACCACCCGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWLHNVF*HHPGPA
Trigger: GGCTGGCCCCGGGTGGTGTCAGAAGACATTGTGAAG...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGCTCCAGGCTCCACTTaGGCTGCCCAGACACGGGAG +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCAPGST*AAQTRE
Trigger: CTCCCGTGTCTGGGCAGCTCAAGTGGAGCCTGGAGC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTAGGGCTCGGGGTCACTaGAGGAGAAGGGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIRARGH*RRRGHH
Trigger: GTGATGCCCCCTTCTCCTTCAGTGACCCCGAGCCCT...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGCCACCAGCACAGACTTaGTGGCCCGAAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPPPAQT*WPEGPS
Trigger: ACTGGGGCCTTCGGGCCATCAAGTCTGTGCTGGTGG...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCCTCTCAGGGCCCTCATaGGCACCTGGTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFLSGPS*APGPLP
Trigger: GGGCAGAGGACCAGGTGCTCATGAGGGCCCTGAGAG...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGCGATCTTGGGGATGTTaGAGTCTCTCAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRRSWGC*SLSGPS
Trigger: TGAGGGCCCTGAGAGACTTCAACATCCCCAAGATCG...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCATGTGCTGGCGGATaGGGGTGTGTGGGGCCACCG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPCAGG*GCVGPP
Trigger: CGGTGGCCCCACACACCCTCATCCGCCAGCACATGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACACCGGGCTTCAGCAATaGCTCCGGTCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYTGLQQ*LRSGCP
Trigger: GGGACACCCAGACCGGAGTCATTGCTGAAGCCCGGT...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCTCCAGGCTGCCCAGGTaGTCGGGGATAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFSRLPR*SGIGSR
Trigger: CCTGCTGCCTATCCCCGAGCACCTGGGCAGCCTGGA...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTCCAGGCTGCCCAGGTaGTCGGGGATAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFSRLPR*SGIGSR
Trigger: CCTGCTGCCTATCCCCGAGCACCTGGGCAGCCTGGA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCCATGGAGTCCAGCGTaGCGTCCAGGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCPWSPA*RPGCPG
Trigger: ACCTGGGCAGCCTGGACGGCACGCTGGACTCCATGG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCATGGTGAAGTCTGCCTaGTCCATCTCCTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTMVKSA*SISSNR
Trigger: CCTGTTGGAGGAGATGGAGCAGGCAGACTTCACCAT...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCGCTGGATGAGTGGCTaGCCCAGGTTGAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCRWMSG*PRLKWQ
Trigger: CTGCCACTTCAACCTGGGGCAGCCACTCATCCAGCG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCCTATCGGTGGCCACCTaGCTCTCCTTGACTTTCATC +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTLSVAT*LSLTFI
Trigger: GATGAAAGTCAAGGAGAGGCAGGTGGCCACCGATAG...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTACAGGCTGGCAGACTTaGACAGCGCCTCCATCACGC +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCTGWQT*TAPPSR
Trigger: GCGTGATGGAGGCGCTGTGCAAGTCTGCCAGCCTGT...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCGTGCCAGCAGGGCCTaGAGGGGCTCCGCCCATGAT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRASRA*RGSAHD
Trigger: ATCATGGGCGGAGCCCCTGCAGGCCCTGCTGGCACG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCTCTCCGGCAGCTCCGTaGGCCCTGCGTAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFSPAAP*ALRSQD
Trigger: ATCCTGGCTACGCAGGGCGCACGGAGCTGCCGGAGA...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGAGCACCTGGTCCTCTaGCCGGGTGGGGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVEHLVL*PGGVSP
Trigger: AGGGGAGACCCCACCCGGGCAGAGGACCAGGTGCTC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGTGCAAGGCCAGGGCTaGAGTCACCAGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYVQGQG*SHQVAA
Trigger: AGCAGCCACCTGGTGACTGCAGCCCTGGCCTTGCAC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGGGCTCTGCTTCCCACTaGCACCCACGCCCACCAACA +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLGSASH*HPRPPT
Trigger: TGTTGGTGGGCGTGGGTGGCAGTGGGAAGCAGAGCC...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTAGGCGCGAGAGGCTCTaGTTCCCACTGCCACCCACG +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKARRERL*FPLPPT
Trigger: CGTGGGTGGCAGTGGGAAGCAGAGCCTCTCGCGCCT...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGATCAGCACCAGGAACTaGTCCTCGGCCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWISTRN*SSATWE
Trigger: CTCCCAGGTGGCCGAGGAGCAGTTCCTGGTGCTGAT...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTCACCTCAGGCTCAATaGCCTCTGTTTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTSPQAQ*PLFPPG
Trigger: TCCTGGAGGAAACAGAGGGCATTGAGCCTGAGGTGA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTCCAGGAGCACAGGCCTaGCGCGGCCGTGGACTTAGA +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACPGAQA*RGRGLR
Trigger: TCTAAGTCCACGGCCGCGGCAGGCCTGTGCTCCTGG...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGCCGCCCCAGCTCTGGTaGTGCAGGAAGTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPPPQLW*CRKSTG
Trigger: ACCTGTGGACTTCCTGCAGCACCAGAGCTGGGGCGG...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGTGCGGTCCGGCCTCATaGAGCGCACCATGCACAGCT +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLCGPAS*SAPCTA
Trigger: AGCTGTGCATGGTGCGCTGCATGAGGCCGGACCGCA...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTCTGCCAGGTAGGTCCTaGACAGCCGGCGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACLPGRS*TAGGPS
Trigger: ACTGGGACCGCCGGCTGTGCAGGACCTACCTGGCAG...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCTGCCAGGTAGGTCCTaGACAGCCGGCGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVLPGRS*TAGGPS
Trigger: ACTGGGACCGCCGGCTGTGCAGGACCTACCTGGCAG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCGAGCAGCGCCACAGCTaGCAGGATCCACTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVEQRHS*QDPLGC
Trigger: GCAGCCAAGTGGATCCTGGCAGCTGTGGCGCTGCTC...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAAGGGGATCCTCTCCATaGAGTCCAGCGTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQRGSSP*SPACRP
Trigger: TGGACGGCACGCTGGACTCCATGGAGAGGATCCCCT...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGCAGCTGCTTGTAGTCTaGCACCGTGACCTCGAACAG +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRQLLVV*HRDLEQ
Trigger: CTGTTCGAGGTCACGGTGCCAGACTACAAGCAGCTG...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGAAGAGCTTGGACAGGTaGCGGCTCACCTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLKSLDR*RLTSTG
Trigger: CCCCGTGGAGGTGAGCCGCCACCTGTCCAAGCTCTT...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCTCGTACAGCTCCTTaGGGGAGTCGGGCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVARTAP*GSRAGR
Trigger: ACGCCCCGCCCGACTCCCCCAAGGAGCTGTACGAGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTCTTCTGGCCACTCGTaGAACCAGTTGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTSSGHS*NQLMAV
Trigger: CACAGCCATCAACTGGTTCCACGAGTGGCCAGAAGA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGGCGCTGGCTCGGCCTTaGCCAGGTCTGTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPALARP*PGLFHR
Trigger: CCTGTGAAACAGACCTGGCCAAGGCCGAGCCAGCGC...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTTGGACATGCGGTCGCTaGGCAGACCCTGGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCWTCGR*ADPGCS
Trigger: GGAACAACCAGGGTCTGCCCAGCGACCGCATGTCCA...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGGCAATGACTCCGGTCTaGGTGTCCCAGCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWAMTPV*VSQRAP
Trigger: AGGAGCTCGCTGGGACACCCAGACCGGAGTCATTGC...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGGGAGAAGGCGAGGGATaGAGGGAATTCCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPGEGEG*REFPRH
Trigger: GTGCCGTGGGAATTCCCTTCATCCCTCGCCTTCTCC...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTGTGGCTGCCCCAGGTTaGAGTGGCAGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACVAAPG*SGSPGP
Trigger: TGGACCAGGACTGCCACTTCAACCTGGGGCAGCCAC...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCTGGCCAGGCGAGGGATaGGCCTGGCCACATTGTAGA +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVWPGEG*AWPHCR
Trigger: TCTACAATGTGGCCAGGCTCATCCCTCGCCTGGCCA...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACTCATCAGGTGCCCCATaGCCTCTACCAGCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYSSGAP*PLPARR
Trigger: ACGACGGGCTGGTAGAGGTCATGGGGCACCTGATGA...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTCATCAGGTGCCCCATaGCCTCTACCAGCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPSSGAP*PLPARR
Trigger: ACGACGGGCTGGTAGAGGTCATGGGGCACCTGATGA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTAGGGCTCGGGGTCACTaGAGGAGAAGGGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFRARGH*RRRGHH
Trigger: GTGATGCCCCCTTCTCCTTCAGTGACCCCGAGCCCT...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCAGGGGCTCCGCCCATaGTCAGGTGGAGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLQGLRP*SGGGTA
Trigger: CGCAGTCCCTCCACCTGATCATGGGCGGAGCCCCTG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGACCGAGTGTCGGACTTaGAGCAGCTCTTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWTECRT*SSSSSW
Trigger: CCAGCTGGAAGAGCTGCTTCAAGTCCGACACTCGGT...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCCATGTGCTGGCGGATaGGGGTGTGTGGGGCCACCG +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLPCAGG*GCVGPP
Trigger: CGGTGGCCCCACACACCCTCATCCGCCAGCACATGG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGTTTAGGTCGTCCACCTaGGAGGCCGTGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLFRSST*EAVLCS
Trigger: GCTGCAGAGCACGGCCTCTCAGGTGGACGACCTAAA...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCCCTCACCTGCAGAATaGCCCAGTGTCCCTTTTCGG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWPSPAE*PSVPFR
Trigger: CCGAAAAGGGACACTGGGTCATTCTGCAGGTGAGGG...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGAGCGAGCTCCTTCCATaGAGAGCCCGTACACGTAGG +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWSELLP*RARTRR
Trigger: CCTACGTGTACGGGCTCTTCATGGAAGGAGCTCGCT...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCACCGGGCTTCAGCAATaGCTCCGGTCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCTGLQQ*LRSGCP
Trigger: GGGACACCCAGACCGGAGTCATTGCTGAAGCCCGGT...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCCGACAGGGAGATGTTaGCCAGGACCTCCTCGATCT +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWPTGRC*PGPPRS
Trigger: AGATCGAGGAGGTCCTGGGCAACATCTCCCTGTCGG...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCCGACAGGGAGATGTTaGCCAGGACCTCCTCGATCT +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCPTGRC*PGPPRS
Trigger: AGATCGAGGAGGTCCTGGGCAACATCTCCCTGTCGG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTCAGGTTGGCCACCCTaGCGTCCAGGTCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFSGWPP*RPGPTG
Trigger: CCCTGTTGGACCTGGACGGCAGGGTGGCCAACCTGA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCGGATGGCGGGGTTCTaGAGCTCGCTCACAGCACGC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRMAGF*SSLTAR
Trigger: GCGTGCTGTGAGCGAGCTGCAGAACCCCGCCATCCG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCAGCGGTGTCGAAGCTaGGACTGCCAGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVQRCRS*DCQVKA
Trigger: GGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCCAGCCGAGGTGTGTTaGCCAGGTACTCGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWPAEVC*PGTRRS
Trigger: ACTCCTACGAGTACCTGGGCAACACACCTCGGCTGG...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCTCTCCGTCTTGCCCGTaGCAGCAGGGCCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLSPSCP*QQGLQG
Trigger: CCCCTGCAGGCCCTGCTGGCACGGGCAAGACGGAGA...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTTGGCTTTCTCTGACTaGACCTTGCGCCTCTCAATC +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTLAFSD*TLRLSI
Trigger: GATTGAGAGGCGCAAGGTGCAGTCAGAGAAAGCCAA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGTTCTCCAGCACCCCCTaGAGCATGGCTGAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLFSSTP*SMAEVV
Trigger: CACGACCTCAGCCATGCTGCAGGGGGTGCTGGAGAA...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAATGCCTGTGGTCCATGTaGTGGCGGATGAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQCLWSM*WRMRVC
Trigger: ACACACCCTCATCCGCCAGCACATGGACCACAGGCA...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACTGTCCTTGGGGATCTTaGCCCCAGGCGCTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYCPWGS*PQALSG
Trigger: TCCTGACAGCGCCTGGGGGCAAGATCCCCAAGGACA...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCAGGAGCACAGGCCTaGCGCGGCCGTGGACTTAGA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPGAQA*RGRGLR
Trigger: TCTAAGTCCACGGCCGCGGCAGGCCTGTGCTCCTGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAACCAGGTGGCCACGTCTaGGTCATCAGTCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQPGGHV*VISQQS
Trigger: ACTCTGCTGACTGATGACGCAGACGTGGCCACCTGG...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTAAGGAGCCCCTCACCTaGAGAATGACCCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCKEPLT*RMTQCP
Trigger: GGGACACTGGGTCATTCTGCAGGTGAGGGGCTCCTT...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGGCAGGTTGGCATACATaGCCGTGGGAGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWAGWHT*PWEAHW
Trigger: CCAATGAGCCTCCCACGGGCATGTATGCCAACCTGC...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCCCGTGACACCCCCGTaGCTGCTCCCGAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCPVTPP*LLPSLS
Trigger: AGACAGACTCGGGAGCAGGCACGGGGGTGTCACGGG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTGAGCAGCGCCACAGCTaGCAGGATCCACTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVEQRHS*QDPLGC
Trigger: GCAGCCAAGTGGATCCTGGCAGCTGTGGCGCTGCTC...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAACTGAGCCAGGGTAGGTaGTGTCTTGGGGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQLSQGR*CLGDGV
Trigger: GACACCATCCCCAAGACACCACCTACCCTGGCTCAG...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTAGGCGGACCTCCCTGTaGCAGGCCTTCAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKARRTSL*QAFSCL
Trigger: CAAGCAGCTGAAGGCCTGCCACAGGGAGGTCCGCCT...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTGCACCTATCTGTGAGTaGGGTGATGACCAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCAPICE*GDDQPR
Trigger: CCTCGGCTGGTCATCACCCCACTCACAGATAGGTGC...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGGGCACGTCCAGAGCTaGGAAGAGGTCGCCGATCAG +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFGHVQS*EEVADQ
Trigger: CTGATCGGCGACCTCTTCCCAGCTCTGGACGTGCCC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCCTAGAGACGGTGGCTaGGGTGGCTGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVPRDGG*GGCPQV
Trigger: CACCTGAGGACAGCCACCCCAGCCACCGTCTCTAGG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTGCTGATCCTGGAACATaGCGCCCCCAAAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIADPGT*RPQRPR
Trigger: TCTGGGCCTTTGGGGGCGCCATGTTCCAGGATCAGC...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGCGGATGAGGGTGTGTaGGGCCACCGTGCCATACTT +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYADEGV*GHRAIL
Trigger: AAGTATGGCACGGTGGCCCCACACACCCTCATCCGC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGTGCTCCTCGGCCACCTaGGAGTCCGTCATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLCSSAT*ESVIRN
Trigger: GTTCCTGATGACGGACTCCCAGGTGGCCGAGGAGCA...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTGCTCCTCGGCCACCTaGGAGTCCGTCATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPCSSAT*ESVIRN
Trigger: GTTCCTGATGACGGACTCCCAGGTGGCCGAGGAGCA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGTCCACACCCACCACCTaGATCAGCTTGTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRSTPTT*ISLSAF
Trigger: GAATGCAGACAAGCTGATCCAGGTGGTGGGTGTGGA...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCCTGGTTGTTCCAGGTaGCCACGTCTGCGTCATCAG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWPGCSR*PRLRHQ
Trigger: CTGATGACGCAGACGTGGCCACCTGGAACAACCAGG...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTGATCCGGACGCTCTTTaGCCACCACAGCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACDPDAL*PPQRPG
Trigger: TCCTGGCCGCTGTGGTGGCCAAAGAGCGTCCGGATC...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGATCCGGACGCTCTTTaGCCACCACAGCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFDPDAL*PPQRPG
Trigger: TCCTGGCCGCTGTGGTGGCCAAAGAGCGTCCGGATC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGCAGCTAGCCACACAGTaGTGGGCAGGGCGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPQLATQ*WAGRSL
Trigger: CAGACTTCGCCCTGCCCACCACTGTGTGGCTAGCTG...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACCAGCTAGCCACACAGTaGTGGGCAGGGCGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYQLATQ*WAGRSL
Trigger: CAGACTTCGCCCTGCCCACCACTGTGTGGCTAGCTG...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCTTCACAATGTCTTCTaGCACCACCCGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCLHNVF*HHPGPA
Trigger: GGCTGGCCCCGGGTGGTGTCAGAAGACATTGTGAAG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGGAGAAGGCGAGGGATaGAGGGAATTCCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCGEGEG*REFPRH
Trigger: GTGCCGTGGGAATTCCCTTCATCCCTCGCCTTCTCC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGATGGTCTGCACGCGGTaGAAGAAGGAATTCATTCGG +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRMVCTR*KKEFIR
Trigger: CCGAATGAATTCCTTCTTTCACCGCGTGCAGACCAT...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACCCTCCATGCTGGACATaGCCGGGTGCTCGATGTGTT +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYPPCWT*PGARCV
Trigger: AACACATCGAGCACCCGGTCATGTCCAGCATGGAGG...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGGGCTCGGGGTCACTaGAGGAGAAGGGGGCATCAC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRARGH*RRRGHH
Trigger: GTGATGCCCCCTTCTCCTTCAGTGACCCCGAGCCCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTTGTCTTCTGAGCCGATaGAGATGCTCTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCCLLSR*RCSPGG
Trigger: GCCACCTGGAGAGCATCTTCATCGGCTCAGAAGACA...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCGTCAAGGCGGAACTTaGGCTTACACAGGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCRQGGT*AYTGCR
Trigger: TCGACAGCCTGTGTAAGCTCAAGTTCCGCCTTGACG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGCAGGGGCTCCGCCCATaGTCAGGTGGAGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEQGLRP*SGGGTA
Trigger: CGCAGTCCCTCCACCTGATCATGGGCGGAGCCCCTG...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCACGTTGCTGGCCAGGGTaGGGACCTTGTTGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVARCWPG*GPCCRP
Trigger: TGGACGACAACAAGGTCCTCACCCTGGCCAGCAACG...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTGGGCGTTTTTCTCCGTaGGCAGGCACTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACGRFSP*AGTPAG
Trigger: ACCTGCTGGAGTGCCTGCTCACGGAGAAAAACGCCC...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCTGCTCTGCAGCTTCATaGGGCCGTTCTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFCSAAS*GRSPAA
Trigger: AGCGGCTGGAGAACGGCCTCATGAAGCTGCAGAGCA...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTGGCTTTCTCCTTGCTaGCCTTCTCCGTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWWLSPC*PSPSPH
Trigger: GTGTGGAGACGGAGAAGGTCAGCAAGGAGAAAGCCA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCCCTCCTGCTGACACTTaGTTTTCTCAGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTPPADT*FSQLLL
Trigger: AAGCAACAGCTGAGAAAATCAAGTGTCAGCAGGAGG...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGAGACGAAGGCCGAGATaGGCAGCACATCCCCACACA +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPRRRPR*AAHPHT
Trigger: TGTGTGGGGATGTGCTGCTCATCTCGGCCTTCGTCT...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACAGCGAGCTCCTTCCATaGAGAGCCCGTACACGTAGG +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYSELLP*RARTRR
Trigger: CCTACGTGTACGGGCTCTTCATGGAAGGAGCTCGCT...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACCGGGCTTCAGCAATaGCTCCGGTCTGGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTGLQQ*LRSGCP
Trigger: GGGACACCCAGACCGGAGTCATTGCTGAAGCCCGGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCTGCTCGTGGATGCACTaGAGGTTCATGAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFCSWMH*RFMSRA
Trigger: CGCCCGGCTCATGAACCTGCAGTGCATCCACGAGCA...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTGCTCGTGGATGCACTaGAGGTTCATGAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFCSWMH*RFMSRA
Trigger: CGCCCGGCTCATGAACCTGCAGTGCATCCACGAGCA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGACCTCAAGCCTCTCCTaGAGCTCCAGGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLTSSLS*SSRLHL
Trigger: CAAGTGGAGCCTGGAGCTGCAGGAGAGGCTTGAGGT...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTACAGGCTGGCAGACTTaGACAGCGCCTCCATCACGC +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACTGWQT*TAPPSR
Trigger: GCGTGATGGAGGCGCTGTGCAAGTCTGCCAGCCTGT...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGCCTGCATGAGCTGTTaGCAGTGGCGGTCACGGATG +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFACMSC*QWRSRM
Trigger: CATCCGTGACCGCCACTGGCAACAGCTCATGCAGGC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGATCAGGTTCTGCAGCTaGACCTGGTTGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWIRFCS*TWLSSS
Trigger: GCTGGAGGACAACCAGGTGCAGCTGCAGAACCTGAT...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCAGCGGTGTCGAAGCTaGGACTGCCAGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVQRCRS*DCQVKA
Trigger: GGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTGCAAGGCCAGGGCTaGAGTCACCAGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVVQGQG*SHQVAA
Trigger: AGCAGCCACCTGGTGACTGCAGCCCTGGCCTTGCAC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTGCTGAGACTTTCTGGTaGAAGGCCAGGGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIAETFW*KARAAV
Trigger: GACTGCAGCCCTGGCCTTGCACCAGAAAGTCTCAGC...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCTCGAAGAGCCCGCGTaGCGTGTACATGTACACAGA +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCLEEPA*RVHVHR
Trigger: TCTGTGTACATGTACACGGCACGCGGGCTCTTCGAG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCGCCCCAGCTCTGGTaGTGCAGGAAGTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPPQLW*CRKSTG
Trigger: ACCTGTGGACTTCCTGCAGCACCAGAGCTGGGGCGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGATCTCCAGGGTGTCCTaGGTGAAAAGATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWISRVS*VKRSSA
Trigger: GGCGCTGGATCTTTTCACGCAGGACACCCTGGAGAT...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCAGGAAGCCGATCTCTaGGTTGGGGTGCAGGCCGTA +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCQEADL*VGVQAV
Trigger: TACGGCCTGCACCCCAACGCAGAGATCGGCTTCCTG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCCCGTGACACCCCCGTaGCTGCTCCCGAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLPVTPP*LLPSLS
Trigger: AGACAGACTCGGGAGCAGGCACGGGGGTGTCACGGG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGGGACTTGAGGGACTCTaGGAAGCCCAGGCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWGLEGL*EAQARN
Trigger: ATTCCTTGCCTGGGCTTCCCAGAGTCCCTCAAGTCC...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCGGAGCGAGTTGTCCATaGAGGAGGGGATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVGASCP*RRGSSP
Trigger: TGGAGAGGATCCCCTCCTCCATGGACAACTCGCTCC...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGGCAGAGGCCGCCATCTaGGCATCGTACATGAGTTTG +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWAEAAI*ASYMSL
Trigger: CAAACTCATGTACGATGCCCAGATGGCGGCCTCTGC...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTTGCCCCAGGTTGAAGTaGCAGTCCTGGTCCACACCC +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVCPRLK*QSWSTP
Trigger: GGGTGTGGACCAGGACTGCCACTTCAACCTGGGGCA...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTTTTGCTTGGCTTTCTaGATCCGGTTCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTFCLAF*IRFCRL
Trigger: CAACCTGCAGAACCGGATCCAGAAAGCCAAGCAAAA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCCTGAGCCAGGGTAGGTaGTGTCTTGGGGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVLSQGR*CLGDGV
Trigger: GACACCATCCCCAAGACACCACCTACCCTGGCTCAG...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACTTCTGCAGCTGCACCTaGTTGTCCTCCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYFCSCT*LSSSVS
Trigger: GGAGACGCTGGAGGACAACCAGGTGCAGCTGCAGAA...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGGCACCTATCTGTGAGTaGGGTGATGACCAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPAPICE*GDDQPR
Trigger: CCTCGGCTGGTCATCACCCCACTCACAGATAGGTGC...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGGGCACGTCCAGAGCTaGGAAGAGGTCGCCGATCAG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVGHVQS*EEVADQ
Trigger: CTGATCGGCGACCTCTTCCCAGCTCTGGACGTGCCC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCCAAACACCAGCCTCATaGTGCGATTCAAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTQTPAS*CDSREF
Trigger: GAATTCCCTTGAATCGCACCATGAGGCTGGTGTTTG...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCTAGAGACGGTGGCTaGGGTGGCTGTCCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPRDGG*GGCPQV
Trigger: CACCTGAGGACAGCCACCCCAGCCACCGTCTCTAGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTGCTGATCCTGGAACATaGCGCCCCCAAAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACADPGT*RPQRPR
Trigger: TCTGGGCCTTTGGGGGCGCCATGTTCCAGGATCAGC...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTCAGCTTCTTAGTGCCTaGGGGGCCGTAGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAQLLSA*GAVVPP
Trigger: GGGAGGAACTACGGCCCCCCAGGCACTAAGAAGCTG...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCTGTGGTCCATGTGCTaGCGGATGAGGGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVLWSMC*RMRVCG
Trigger: CCCACACACCCTCATCCGCCAGCACATGGACCACAG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGGAGGTGAGGGCCTCCTaGCCGGGGAAGCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTEEVRAS*PGKLTA
Trigger: TGCTGTGAGCTTCCCCGGCCAGGAGGCCCTCACCTC...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGCGCTGGCTCGGCCTTaGCCAGGTCTGTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCALARP*PGLFHR
Trigger: CCTGTGAAACAGACCTGGCCAAGGCCGAGCCAGCGC...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCGCTGGCTCGGCCTTaGCCAGGTCTGTTTCACAGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVALARP*PGLFHR
Trigger: CCTGTGAAACAGACCTGGCCAAGGCCGAGCCAGCGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGTTGACCACAGCGTCTaGCGGGGATCCGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYVDHSV*RGSEGL
Trigger: AAGTCCTTCGGATCCCCGCCAGACGCTGTGGTCAAC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTACTCAGGGTCAAAGGTaGGGTTGCCTTGGTACGGCT +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCTQGQR*GCLGTA
Trigger: AGCCGTACCAAGGCAACCCCACCTTTGACCCTGAGT...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCCAGGGCCTGCCTCTTaGGCGCCACGTCGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLPGPAS*APRRSR
Trigger: TCTACTGCGACGTGGCGCCCAAGAGGCAGGCCCTGG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTTGATGAGCGTGCACTaGGCCTGCATCTCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPLMSVH*ACISGL
Trigger: CAAGCCCGAGATGCAGGCCCAGTGCACGCTCATCAA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGACAGCGGCCAGGAGCTaGTCCTCCAGCCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTETAARS*SSSPSL
Trigger: CAGAGACGGGCTGGAGGACCAGCTCCTGGCCGCTGT...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGATCCGGACGCTCTTTaGCCACCACAGCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVDPDAL*PPQRPG
Trigger: TCCTGGCCGCTGTGGTGGCCAAAGAGCGTCCGGATC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCGATCGATTCCAGCCCTaGGCGCCAAACTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFDRFQP*APNLRL
Trigger: GAGGCGCAAGTTTGGCGCCCAGGGCTGGAATCGATC...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTGATCGATTCCAGCCCTaGGCGCCAAACTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKADRFQP*APNLRL
Trigger: GAGGCGCAAGTTTGGCGCCCAGGGCTGGAATCGATC...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCCATAGAACAGAGCAGTaGACAAGTCTTCCATGTCGG +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTHRTEQ*TSLPCR
Trigger: CCGACATGGAAGACTTGTCCACTGCTCTGTTCTATG...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCAGCAATGACTCCGGTCTaGGTGTCCCAGCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAAMTPV*VSQRAP
Trigger: AGGAGCTCGCTGGGACACCCAGACCGGAGTCATTGC...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCTTCACAATGTCTTCTaGCACCACCCGGGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLHNVF*HHPGPA
Trigger: GGCTGGCCCCGGGTGGTGTCAGAAGACATTGTGAAG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCAGCACGTCCCGGATTTaGTGGGACCAGTCGATGATG +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVSTSRI*WDQSMM
Trigger: CATCATCGACTGGTCCCATCAAATCCGGGACGTGCT...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTCCTGCATGGCCTGGGTaGTCCCTTCTACGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIPAWPG*SLLRFA
Trigger: AGCAAAACGTAGAAGGGATCACCCAGGCCATGCAGG...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGCCTGAGTGGCCTGCATaGGCTGTTGCCAGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTEPEWPA*AVASGG
Trigger: ACCGCCACTGGCAACAGCTCATGCAGGCCACTCAGG...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCCAAACCAGATGGAGATaGCCGAGTCTGCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVQTRWR*PSLRWT
Trigger: TGTCCACCGCAGACTCGGTCATCTCCATCTGGTTTG...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAATGGTGCAGATGGTCATaGTCTTCATCCTGTCACCGG +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQWCRWS*SSSCHR
Trigger: CCGGTGACAGGATGAAGATCATGACCATCTGCACCA...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGGCTGCGACTGCCAGGTaGAGGCCTGCGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTEAATAR*RPANSP
Trigger: TGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGC...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTTGGCCAGGTCCCGCATaGTGGTTGAGAACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACWPGPA*WLRTGH
Trigger: ATGGCCTGTTCTCAACCATCATGCGGGACCTGGCCA...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGCTGTCCTCAGGTGGCTaGTCTCAAACACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLLSSGG*SQTPAS
Trigger: TGAGGCTGGTGTTTGAGATCAGCCACCTGAGGACAG...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGAGGTCGTGTAGAAGTTaGAAGGCACGGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLRSCRS*KARPAP
Trigger: TGGTGCAGGCCGTGCCTTTCAACTTCTACACGACCT...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGCTCTGCAGCTTCATaGGGCCGTTCTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVCSAAS*GRSPAA
Trigger: AGCGGCTGGAGAACGGCCTCATGAAGCTGCAGAGCA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTTAGGTCGTCCACCTaGGAGGCCGTGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVFRSST*EAVLCS
Trigger: GCTGCAGAGCACGGCCTCTCAGGTGGACGACCTAAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTTGCCTTGGTACGGCTTaGAGGCCTTTAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVCLGTA*RPLGRP
Trigger: AGGCCTGCCTAAAGGCCTTCAAGCCGTACCAAGGCA...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCCAGCGTACATTTTCTaGAGCCAGTCCTCCCACAAG +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCPAYIF*SQSSHK
Trigger: CTTGTGGGAGGACTGGCTTCAGAAAATGTACGCTGG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGCCCCGGGGGAAAGGATaGAGAAGATTGGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLPRGKG*RRLVWK
Trigger: CTTCCACACCAATCTTCTTCATCCTTTCCCCCGGGG...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAATTGTTGAAGGGGTATaGTCGATTCCAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQIVEGV*SIPALG
Trigger: GCCCAGGGCTGGAATCGATCATACCCCTTCAACAAT...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGGCCGCATCTCATTGGTaGGGATGTTCATCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWAASHW*GCSSSH
Trigger: GTGAGAGGATGAACATCCTCACCAATGAGATGCGGC...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAGACCTCCTCCACTACTaGAATCAACTGGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQDLLHY*NQLVHG
Trigger: ACCGTGGACCAGTTGATTGCAGTAGTGGAGGAGGTC...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGCTCGTGGATGCACTaGAGGTTCATGAGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVCSWMH*RFMSRA
Trigger: CGCCCGGCTCATGAACCTGCAGTGCATCCACGAGCA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTCTCCTCCAACAGGATaGGCAGGGGCTTCAGGTATA +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWSPPTG*AGASGI
Trigger: TATACCTGAAGCCCCTGCGCATCCTGTTGGAGGAGA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGCGGTATCTGGCCATCTaGAGAGGCCGCCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTERYLAI*RGRHLG
Trigger: GCCCAGATGGCGGCCTCTGCAGATGGCCAGATACCG...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGTTCATCCGGCAGCTTTaGAGCAACCCCATCATCTCG +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWFIRQL*SNPIIS
Trigger: CGAGATGATGGGGTTGCTGCAAAGCTGCCGGATGAA...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGTCAGGTTGGCCACCCTaGCGTCCAGGTCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTESGWPP*RPGPTG
Trigger: CCCTGTTGGACCTGGACGGCAGGGTGGCCAACCTGA...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATCAGGGGCTCAAACATaGTATCGGTGGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVASGAQT*YRWPPA
Trigger: GGCAGGTGGCCACCGATAGCATGTTTGAGCCCCTGA...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCTCTCTGACTGCACCTTaGGCCTCTCAATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVSLTAP*ASQSSC
Trigger: GCAGCTGGATTGAGAGGCGCAAGGTGCAGTCAGAGA...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACTCTCTGACTGCACCTTaGGCCTCTCAATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYSLTAP*ASQSSC
Trigger: GCAGCTGGATTGAGAGGCGCAAGGTGCAGTCAGAGA...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGTCCAGGGCCTCTTGTaGTGCCAAGAGCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLVQGLL*CQERWL
Trigger: GAGCCAGCGCTCTTGGCAGCACAAGAGGCCCTGGAC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCCAGGTGGCCACGTCTaGGTCATCAGTCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCPGGHV*VISQQS
Trigger: ACTCTGCTGACTGATGACGCAGACGTGGCCACCTGG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGCCAGCGCTCTGTGTTaGACAGGATGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYASALC*TGWWHS
Trigger: AGAATGCCACCATCCTGTGCAACACAGAGCGCTGGC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTAAGGAGCCCCTCACCTaGAGAATGACCCAGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFKEPLT*RMTQCP
Trigger: GGGACACTGGGTCATTCTGCAGGTGAGGGGCTCCTT...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCATCTCCAGGGTGTCCTaGGTGAAAAGATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVISRVS*VKRSSA
Trigger: GGCGCTGGATCTTTTCACGCAGGACACCCTGGAGAT...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTACTCGATCTCCTTGGTaGACATCTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCTRSPW*TSPGCP
Trigger: AGGACACCCTGGAGATGTGCACCAAGGAGATCGAGT...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGGGGATCCTCTCCATaGAGTCCAGCGTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRGSSP*SPACRP
Trigger: TGGACGGCACGCTGGACTCCATGGAGAGGATCCCCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTAGGCTTGGCAGAAGATaGTGGCCAGCCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACRLGRR*WPASCP
Trigger: TGGACAGGAGGCTGGCCACCATCTTCTGCCAAGCCT...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGCAGAGGCCGCCATCTaGGCATCGTACATGAGTTTG +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYAEAAI*ASYMSL
Trigger: CAAACTCATGTACGATGCCCAGATGGCGGCCTCTGC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGGTTTCAGGTACTTCATaGACACCTCAAGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRVSGTS*TPQASP
Trigger: AGGAGAGGCTTGAGGTGTCCATGAAGTACCTGAAAC...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACCGCTTGTTCAGGTTaGCCACCCTGCCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTACSG*PPCRPG
Trigger: ACCTGGACGGCAGGGTGGCCAACCTGAACAAGCGGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCACTGCAGCCAGCCATaGAAGACCTTGGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCHCSQP*KTLVFS
Trigger: TGAGAACACCAAGGTCTTCCATGGCTGGCTGCAGTG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTTCGTGGCGCAACGTaGCGCGCATTCGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVFRGAT*RAFGPA
Trigger: TGCTGGACCGAATGCGCGCCACGTTGCGCCACGAAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCGTGGCTGTCCTCAGGTaGCTGATCTCAAACACCAGC +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVVAVLR*LISNTS
Trigger: GCTGGTGTTTGAGATCAGCCACCTGAGGACAGCCAC...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTGTAGTAGTCAAAAATaGTCCCCTGCGAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTCSSQK*SPARVT
Trigger: AGTTACCCTCGCAGGGGACCATTTTTGACTACTACA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGTGCGGATGGTTTCTGTaGTGTGGACTAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWCGWFL*CGLERP
Trigger: AGGCCTCTCTAGTCCACACCACAGAAACCATCCGCA...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCAGCTTCTTAGTGCCTaGGGGGCCGTAGTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVQLLSA*GAVVPP
Trigger: GGGAGGAACTACGGCCCCCCAGGCACTAAGAAGCTG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCTGTGGTCCATGTGCTaGCGGATGAGGGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLWSMC*RMRVCG
Trigger: CCCACACACCCTCATCCGCCAGCACATGGACCACAG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGGCTGCAGTCACCAGGTaGCTGCTCAGCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTEAAVTR*LLSRWI
Trigger: GATCCAGCGGCTGAGCAGCCACCTGGTGACTGCAGC...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGCTGCAGTCACCAGGTaGCTGCTCAGCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLAAVTR*LLSRWI
Trigger: GATCCAGCGGCTGAGCAGCCACCTGGTGACTGCAGC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGGAGGGACTTCACCTGTaGCCGCATGGAGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLEGLHL*PHGGDD
Trigger: ATCATCTCCTCCATGCGGCCACAGGTGAAGTCCCTC...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGTTGACCACAGCGTCTaGCGGGGATCCGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFVDHSV*RGSEGL
Trigger: AAGTCCTTCGGATCCCCGCCAGACGCTGTGGTCAAC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGAGATCACCCTATTGGTaGCATCTGCCTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWRSPYW*HLPPAD
Trigger: GTCAGCAGGAGGCAGATGCCACCAATAGGGTGATCT...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGGACATGCGGTCGCTaGGCAGACCCTGGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVWTCGR*ADPGCS
Trigger: GGAACAACCAGGGTCTGCCCAGCGACCGCATGTCCA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGGCGGAAACTGGGGTaGTACTCCACCTCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFRRKLG*YSTSLS
Trigger: CGACAAGGAGGTGGAGTACCACCCCAGTTTCCGCCT...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTAGGCGGAAACTGGGGTaGTACTCCACCTCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVRRKLG*YSTSLS
Trigger: CGACAAGGAGGTGGAGTACCACCCCAGTTTCCGCCT...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTTTGATGAGCGTGCACTaGGCCTGCATCTCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACLMSVH*ACISGL
Trigger: CAAGCCCGAGATGCAGGCCCAGTGCACGCTCATCAA...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGGCGCCGTCTTCTGGATaGCTTTCTCAAACACCACGT +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWAPSSG*LSQTPR
Trigger: ACGTGGTGTTTGAGAAAGCCATCCAGAAGACGGCGC...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGGCTGGCGCCGTCTTCTaGATGGCTTTCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLAGAVF*MAFSNT
Trigger: GGTGTTTGAGAAAGCCATCCAGAAGACGGCGCCAGC...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCAGCAGGGCGAAGTCTGTaGTCCAGGATTCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAAGRSL*SRIQAP
Trigger: GGGAGCTTGAATCCTGGACCACAGACTTCGCCCTGC...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCGCAGGGCGAAGTCTGTaGTCCAGGATTCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFAGRSL*SRIQAP
Trigger: GGGAGCTTGAATCCTGGACCACAGACTTCGCCCTGC...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCAATGACTCCGGTCTaGGTGTCCCAGCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVAMTPV*VSQRAP
Trigger: AGGAGCTCGCTGGGACACCCAGACCGGAGTCATTGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTTCATACCAGCAGCATTaGGCGTCAGCACCAGGACAG +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACSYQQH*ASAPGQ
Trigger: CTGTCCTGGTGCTGACGCTCAATGCTGCTGGTATGA...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCAGAGGTGGCCCAGATaGAGCAGATGGTGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCQRWPR*SRWCLA
Trigger: TGCTAAGCACCATCTGCTTCATCTGGGCCACCTCTG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCCAGAGGTGGCCCAGATaGAGCAGATGGTGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFQRWPR*SRWCLA
Trigger: TGCTAAGCACCATCTGCTTCATCTGGGCCACCTCTG...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCCTGCATGGCCTGGGTaGTCCCTTCTACGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCPAWPG*SLLRFA
Trigger: AGCAAAACGTAGAAGGGATCACCCAGGCCATGCAGG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGCCTCCCCATAGCTCTTaGGCAGTTCGATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPPPHSS*AVRWFA
Trigger: AGCAAACCATCGAACTGCTCAAGAGCTATGGGGAGG...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTCAGCACGCAGGGACGTaGTCATGTTTTTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIQHAGT*SCFSRC
Trigger: ACACCGTGAAAAACATGATCACGTCCCTGCGTGCTG...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTGCACTTCGTCAGACTTaGGCATCATGGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACALRQT*ASWCLS
Trigger: GGACAGGCACCATGATGCTCAAGTCTGACGAAGTGC...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTGGCTCTGATGTCTTCTaGGCCGATGAAGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIGSDVF*ADEDAL
Trigger: GAGAGCATCTTCATCGGCTCAGAAGACATCAGAGCC...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACAGGGGCTCCGCCCATaGTCAGGTGGAGGGACTGCG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKQGLRP*SGGGTA
Trigger: CGCAGTCCCTCCACCTGATCATGGGCGGAGCCCCTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGATCTTGGGGATGTTaGAGTCTCTCAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCRSWGC*SLSGPS
Trigger: TGAGGGCCCTGAGAGACTTCAACATCCCCAAGATCG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACCGAGTGTCGGACTTaGAGCAGCTCTTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTECRT*SSSSSW
Trigger: CCAGCTGGAAGAGCTGCTTCAAGTCCGACACTCGGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTCTGTCCTCAGGTGGCTaGTCTCAAACACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACLSSGG*SQTPAS
Trigger: TGAGGCTGGTGTTTGAGATCAGCCACCTGAGGACAG...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGACTCCAGGATACGGTTaGTCTTGCAGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWTPGYG*SCRCEP
Trigger: TGGCTCACATCTGCAAGATCAACCGTATCCTGGAGT...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTTCTTGGACATCTCGTTaGCGGTGGTGTGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVSWTSR*RWCARR
Trigger: CCTACGTGCACACCACCGTCAACGAGATGTCCAAGA...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAGCTTGTAGTGCGGGTTaGAGTACTTGGTGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQACSAG*STWCVG
Trigger: TCCTACACACCAAGTACTTCAACCCGCACTACAAGC...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTCTTGAGCCAAGAAGATaGGCTTGTCCCGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQILEPRR*ACPARR
Trigger: TCTTCGAGCGGGACAAGCTCATCTTCTTGGCTCAAG...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCCCCCGGGGGAAAGGATaGAGAAGATTGGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFPRGKG*RRLVWK
Trigger: CTTCCACACCAATCTTCTTCATCCTTTCCCCCGGGG...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCATCTCGCCACCAGGTaGATGTTCTGTGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVHLATR*MFCGKE
Trigger: CTCCTTGCCACAGAACATTCACCTGGTGGCGAGATG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTCATCTCGCCACCAGGTaGATGTTCTGTGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAHLATR*MFCGKE
Trigger: CTCCTTGCCACAGAACATTCACCTGGTGGCGAGATG...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACATTGTTGAAGGGGTATaGTCGATTCCAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYIVEGV*SIPALG
Trigger: GCCCAGGGCTGGAATCGATCATACCCCTTCAACAAT...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTCGGAACAGCTTCTCTaGGGTGACAGTCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFSEQLL*GDSQEA
Trigger: GGCTTCCTGACTGTCACCTCAGAGAAGCTGTTCCGA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGGACCTCCTCCACTACTaGAATCAACTGGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLDLLHY*NQLVHG
Trigger: ACCGTGGACCAGTTGATTGCAGTAGTGGAGGAGGTC...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCTCTCCTCCAACAGGATaGGCAGGGGCTTCAGGTATA +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVSPPTG*AGASGI
Trigger: TATACCTGAAGCCCCTGCGCATCCTGTTGGAGGAGA...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGAGCATGGTGAAGTCTaGCTGCTCCATCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYEHGEV*LLHLLQ
Trigger: TTGGAGGAGATGGAGCAGGCAGACTTCACCATGCTC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACCTCAAGCCTCTCCTaGAGCTCCAGGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTSSLS*SSRLHL
Trigger: CAAGTGGAGCCTGGAGCTGCAGGAGAGGCTTGAGGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCGTGTTGAGCAAGGTCTaGTTGAAGGGGCGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFVLSKV*LKGRQS
Trigger: TGACTGCCGCCCCTTCAAGCAGACCTTGCTCAACAC...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTCAGGGGCTCAAACATaGTATCGGTGGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSGAQT*YRWPPA
Trigger: GGCAGGTGGCCACCGATAGCATGTTTGAGCCCCTGA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTGGTGTTGGTCCACTaGTCTGGCAGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLVLVH*SGSSCS
Trigger: GCTGCAGGAGCTGCCAGAGCAGTGGACCAACACCAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTATCAGGTTCTGCAGCTaGACCTGGTTGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAIRFCS*TWLSSS
Trigger: GCTGGAGGACAACCAGGTGCAGCTGCAGAACCTGAT...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACCAAACTCGTCCTCCTTaGTGTACATCCCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYQTRPP*CTSPAQ
Trigger: TTGGGCTGGGGATGTACAGCAAGGAGGACGAGTTTG...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCCGTGCCAGCAGGGCCTaGAGGGGCTCCGCCCATGAT +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSRASRA*RGSAHD
Trigger: ATCATGGGCGGAGCCCCTGCAGGCCCTGCTGGCACG...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACAAAGCTGTCTTCTaGCTGAAGCTTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWHKAVF*LKLELH
Trigger: GTGGAGCTCAAGCTTCAGGCAGAAGACAGCTTTGTG...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGCACTTGGGACCCTCGTaGGTGAGGTTGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVHLGPS*VRLARS
Trigger: GGACCTGGCCAACCTCACGCACGAGGGTCCCAAGTG...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTACACCAGCCTCATGGTaGGATTCAAGGGAATTCGCT +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCTPASW*DSREFA
Trigger: AGCGAATTCCCTTGAATCGCACCATGAGGCTGGTGT...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCAGCATCACGGGCCATaGCTTCTCCATGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVQHHGP*LLHEQV
Trigger: GACCTGCTCATGGAGAAGGCATGGCCCGTGATGCTG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGCCAGTGCCCGCGTTaGCCACCAGCATCACGGGCC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKCQCPR*PPASRA
Trigger: GGCCCGTGATGCTGGTGGGCAACGCGGGCACTGGCA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGTGTGGGGCCACCGTaGCATACTTGTCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVCVGPP*HTCPPL
Trigger: CAGAGGTGGACAAGTATGGCACGGTGGCCCCACACA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACTTCAGGGTCAGTTTCTaGCGGTCATACCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYFRVSF*RSYQCL
Trigger: CAGGCACTGGTATGACCGGCAGAAACTGACCCTGAA...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGCCAGCGCTCTGTGTTaGACAGGATGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFASALC*TGWWHS
Trigger: AGAATGCCACCATCCTGTGCAACACAGAGCGCTGGC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGCCGCCCCAGCTCTGGTaGTGCAGGAAGTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEPPQLW*CRKSTG
Trigger: ACCTGTGGACTTCCTGCAGCACCAGAGCTGGGGCGG...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTGGTAGTCCTCATGGCTaGCCGAGCTGTAGCGTTCTA +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAGSPHG*PSCSVL
Trigger: TAGAACGCTACAGCTCGGGCAGCCATGAGGACTACC...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCGGTAGTCCTCATGGCTaGCCGAGCTGTAGCGTTCTA +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFGSPHG*PSCSVL
Trigger: TAGAACGCTACAGCTCGGGCAGCCATGAGGACTACC...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCAGGTTGGCATACATaGCCGTGGGAGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVAGWHT*PWEAHW
Trigger: CCAATGAGCCTCCCACGGGCATGTATGCCAACCTGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCACGCGGATGTACTCTaGCAGGTAGGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCHADVL*QVGPAQ
Trigger: CTGTGCAGGACCTACCTGGCAGAGTACATCCGCGTG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCACGCGGATGTACTCTaGCAGGTAGGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVHADVL*QVGPAQ
Trigger: CTGTGCAGGACCTACCTGGCAGAGTACATCCGCGTG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTCTGTCTCTTTGGGCTaGATTTCTAGGACGGTTCGG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWSVSLG*ISRTVR
Trigger: CCGAACCGTCCTAGAAATGCAGCCCAAAGAGACAGA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGGACTTGAGGGACTCTaGGAAGCCCAGGCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFGLEGL*EAQARN
Trigger: ATTCCTTGCCTGGGCTTCCCAGAGTCCCTCAAGTCC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTGTTTAGCTGCTCGTaGATGCACTGCAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWLFSCS*MHCRFM
Trigger: CATGAACCTGCAGTGCATCCACGAGCAGCTAAACAG...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTTTGAAGTGGCAGTCCTaGTCCACACCCTCTACCCAC +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKALKWQS*STPSTH
Trigger: GTGGGTAGAGGGTGTGGACCAGGACTGCCACTTCAA...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACCTTCTCCGCGCTCTCTaGAATCTCTTTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYLLRAL*NLFLLL
Trigger: CAGCAGCAGAAAGAGATTCCAGAGAGCGCGGAGAAG...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCATTCCAGAACAATGTaGTCTCTGCGCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWHSRTM*SLRSAA
Trigger: AGCTGCTGAGCGCAGAGACCACATTGTTCTGGAATG...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGCTCTCAAAGGAGTCCTaGTACTCCTCAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLLSKES*YSSATF
Trigger: GAAGGTGGCTGAGGAGTACCAGGACTCCTTTGAGAG...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGTGGTGTCTTGGGGATaGTGTCGTCCGTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFVVSWG*CRPSWC
Trigger: ACACCAAGACGGACGACACCATCCCCAAGACACCAC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAAGCCATGGAAGACCTTaGTGTTCTCACAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQSHGRP*CSHSWT
Trigger: TGTCCAGCTGTGAGAACACCAAGGTCTTCCATGGCT...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGCACTGCAGCCAGCCATaGAAGACCTTGGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLHCSQP*KTLVFS
Trigger: TGAGAACACCAAGGTCTTCCATGGCTGGCTGCAGTG...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCAAGACCTCACGTCCTTaGCAAACTTCTTACAGTCAA +
Preference number: 4 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTKTSRP*QTSYSQ
Trigger: TTGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTT...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTCTGCAGCTGCACCTaGTTGTCCTCCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVFCSCT*LSSSVS
Trigger: GGAGACGCTGGAGGACAACCAGGTGCAGCTGCAGAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTGGCTCCAGGTTCTTTaGACCTCAAACCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWWLQVL*TSNQME
Trigger: CTCCATCTGGTTTGAGGTCCAAAGAACCTGGAGCCA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTTGGCTCCAGGTTCTTTaGACCTCAAACCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCWLQVL*TSNQME
Trigger: CTCCATCTGGTTTGAGGTCCAAAGAACCTGGAGCCA...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGGGCTTCCACCACGTTTaGTGTCTTCACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLGFHHV*CLHSIL
Trigger: GAGGATGCTGTGAAGACACCAAACGTGGTGGAAGCC...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCAGTCACCACGGCTTCTaGAATTTCGTGGCGCAACGT +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVSHHGF*NFVAQR
Trigger: ACGTTGCGCCACGAAATTCCAGAAGCCGTGGTGACT...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGAGTCACCACGGCTTCTaGAATTTCGTGGCGCAACGT +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPSHHGF*NFVAQR
Trigger: ACGTTGCGCCACGAAATTCCAGAAGCCGTGGTGACT...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGCTCGTACAGCTCCTTaGGGGAGTCGGGCGGGGCGT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKARTAP*GSRAGR
Trigger: ACGCCCCGCCCGACTCCCCCAAGGAGCTGTACGAGC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTCATACCAGTGCCTGTaGTCCATGTGCTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFSYQCL*SMCWRM
Trigger: CATCCGCCAGCACATGGACCACAGGCACTGGTATGA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACTCTTCTGGCCACTCGTaGAACCAGTTGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYSSGHS*NQLMAV
Trigger: CACAGCCATCAACTGGTTCCACGAGTGGCCAGAAGA...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGGCTCTAGAAAGGTCTTaGGCGTGGTGTAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWALERS*AWCSCS
Trigger: GCTACAACTACACCACGCCCAAGACCTTTCTAGAGC...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTCCACACCCACCACCTaGATCAGCTTGTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPSTPTT*ISLSAF
Trigger: GAATGCAGACAAGCTGATCCAGGTGGTGGGTGTGGA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACAGCCAGCTCGGCGTTaGCTTCCTCCAGGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKQPARR*LPPGPA
Trigger: GGCAGGCCCTGGAGGAAGCCAACGCCGAGCTGGCTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTAGATCACCCTATTGGTaGCATCTGCCTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIRSPYW*HLPPAD
Trigger: GTCAGCAGGAGGCAGATGCCACCAATAGGGTGATCT...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCCACAGGGTAACGCCCTaGCTCTTGAAGTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFHRVTP*LLKFST
Trigger: GGTGGAGAACTTCAAGAGCCAGGGCGTTACCCTGTG...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGTGGACATGCGGTCGCTaGGCAGACCCTGGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTEWTCGR*ADPGCS
Trigger: GGAACAACCAGGGTCTGCCCAGCGACCGCATGTCCA...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGGCGGAAACTGGGGTaGTACTCCACCTCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRRKLG*YSTSLS
Trigger: CGACAAGGAGGTGGAGTACCACCCCAGTTTCCGCCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGGATCAGGCGGAAACTaGGGTGGTACTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVGSGGN*GGTPPP
Trigger: AGGAGGTGGAGTACCACCCCAGTTTCCGCCTGATCC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGATCAGGCGGAAACTaGGGTGGTACTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCGSGGN*GGTPPP
Trigger: AGGAGGTGGAGTACCACCCCAGTTTCCGCCTGATCC...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAACATTGGCTGTGTGCTTaGTGGTCTCCAGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQHWLCA*WSPGFP
Trigger: TGGAAAACCTGGAGACCACCAAGCACACAGCCAATG...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGTCTCCTCAATTTCATTaGCTGTGTGCTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRSPQFH*LCAWWS
Trigger: AGACCACCAAGCACACAGCCAATGAAATTGAGGAGA...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGCTGGCGCCGTCTTCTaGATGGCTTTCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFAGAVF*MAFSNT
Trigger: GGTGTTTGAGAAAGCCATCCAGAAGACGGCGCCAGC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTTCTCTTTGTAGGACTTaGAGAACTCCACGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQISLCRT*RTPRSG
Trigger: GCCGGAGCGTGGAGTTCTCCAAGTCCTACAAAGAGA...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAACCCAGGGACACGTTGTaGAGTTTCCCATTGTCTATG +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQPRDTL*SFPLSM
Trigger: CATAGACAATGGGAAACTCCACAACGTGTCCCTGGG...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTCTTATAGTCCAGGTTTaGGGGGATCTGAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQILIVQV*GDLKPG
Trigger: CCCGGGTTTCAGATCCCCCCAAACCTGGACTATAAG...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCCTGCCAGGCCCATCATaGAGGGGTAGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSLPGPS*RGRPGP
Trigger: TGGCCCGGGCCTACCCCTCCATGATGGGCCTGGCAG...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTGCCAGGCCCATCATaGAGGGGTAGGCCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLPGPS*RGRPGP
Trigger: TGGCCCGGGCCTACCCCTCCATGATGGGCCTGGCAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCAGGGCGAAGTCTGTaGTCCAGGATTCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVAGRSL*SRIQAP
Trigger: GGGAGCTTGAATCCTGGACCACAGACTTCGCCCTGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGAAGTCCAGACATAGGTaGGTCCTCGGATACGCGTCT +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLKSRHR*VLGYAS
Trigger: AGACGCGTATCCGAGGACCCACCTATGTCTGGACTT...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTAGCACAGCCTTCACCTaGAAACCAGTGCCGGGCAAG +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCSTAFT*KPVPGK
Trigger: CTTGCCCGGCACTGGTTTCCAGGTGAAGGCTGTGCT...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTTCATACCAGCAGCATTaGGCGTCAGCACCAGGACAG +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCSYQQH*ASAPGQ
Trigger: CTGTCCTGGTGCTGACGCTCAATGCTGCTGGTATGA...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTCATACCAGCAGCATTaGGCGTCAGCACCAGGACAG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSYQQH*ASAPGQ
Trigger: CTGTCCTGGTGCTGACGCTCAATGCTGCTGGTATGA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAATGTAGTTGTCCTTGGTaGTGTTCTCCGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQCSCPW*CSPASS
Trigger: AGATGAAGCCGGAGAACATCACCAAGGACAACTACA...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGCACGTCCCGGATTTaGTGGGACCAGTCGATGATG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSTSRI*WDQSMM
Trigger: CATCATCGACTGGTCCCATCAAATCCGGGACGTGCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTGTACCAGCCGACAATaGGCTCCAGGTTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFCTSRQ*APGCLQ
Trigger: TTGTAGGCAACCTGGAGCTCATTGTCGGCTGGTACA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCTGCATGGCCTGGGTaGTCCCTTCTACGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPAWPG*SLLRFA
Trigger: AGCAAAACGTAGAAGGGATCACCCAGGCCATGCAGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTCCTCCCCATAGCTCTTaGGCAGTTCGATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACPPHSS*AVRWFA
Trigger: AGCAAACCATCGAACTGCTCAAGAGCTATGGGGAGG...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTCAGCACGCAGGGACGTaGTCATGTTTTTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFQHAGT*SCFSRC
Trigger: ACACCGTGAAAAACATGATCACGTCCCTGCGTGCTG...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGGCGCATTCAGCTGGCTaGTCTGCTTTTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWAHSAG*SAFCCS
Trigger: ACTACAACAAAAAGCAGATCAGCCAGCTGAATGCGC...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTTGGTGCAGATGGTCATaGTCTTCATCCTGTCACCGG +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVWCRWS*SSSCHR
Trigger: CCGGTGACAGGATGAAGATCATGACCATCTGCACCA...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTCCTCGGCCACAAGCATaGTCTCACAAATCAACTCGA +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIPRPQA*SHKSTR
Trigger: TCGAGTTGATTTGTGAGATCATGCTTGTGGCCGAGG...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCCTCTCAGGGCCCTCATaGGCACCTGGTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSLSGPS*APGPLP
Trigger: GGGCAGAGGACCAGGTGCTCATGAGGGCCCTGAGAG...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCGATCTTGGGGATGTTaGAGTCTCTCAGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRSWGC*SLSGPS
Trigger: TGAGGGCCCTGAGAGACTTCAACATCCCCAAGATCG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGCGTTGCTGGCCAGGGTaGGGACCTTGTTGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHERCWPG*GPCCRP
Trigger: TGGACGACAACAAGGTCCTCACCCTGGCCAGCAACG...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCCACTCGATAATCAATaGGCTGATCCTGGAACATGG +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWPLDNQ*ADPGTW
Trigger: CCATGTTCCAGGATCAGCTCATTGATTATCGAGTGG...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTAGGTCGTGTAGAAGTTaGAAGGCACGGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCRSCRS*KARPAP
Trigger: TGGTGCAGGCCGTGCCTTTCAACTTCTACACGACCT...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGGCTTTCTCCTTGCTaGCCTTCTCCGTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVWLSPC*PSPSPH
Trigger: GTGTGGAGACGGAGAAGGTCAGCAAGGAGAAAGCCA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCTGCCTTGGTACGGCTTaGAGGCCTTTAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLCLGTA*RPLGRP
Trigger: AGGCCTGCCTAAAGGCCTTCAAGCCGTACCAAGGCA...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGGCATCTGCCTCCTGCTaGCACTTGATTTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPASASC*HLIFSA
Trigger: AGCTGAGAAAATCAAGTGTCAGCAGGAGGCAGATGC...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTCCAGCGTACATTTTCTaGAGCCAGTCCTCCCACAAG +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFPAYIF*SQSSHK
Trigger: CTTGTGGGAGGACTGGCTTCAGAAAATGTACGCTGG...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGCTTGTAGTGCGGGTTaGAGTACTTGGTGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYACSAG*STWCVG
Trigger: TCCTACACACCAAGTACTTCAACCCGCACTACAAGC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGACCTGGAAGGTGACTTaGGCCAAGAAGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPTWKVT*AKKMSL
Trigger: CAAGCTCATCTTCTTGGCTCAAGTCACCTTCCAGGT...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCCCGGGGGAAAGGATaGAGAAGATTGGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPRGKG*RRLVWK
Trigger: CTTCCACACCAATCTTCTTCATCCTTTCCCCCGGGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGCCGCATCTCATTGGTaGGGATGTTCATCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCAASHW*GCSSSH
Trigger: GTGAGAGGATGAACATCCTCACCAATGAGATGCGGC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTGAGCATGGTGAAGTCTaGCTGCTCCATCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAEHGEV*LLHLLQ
Trigger: TTGGAGGAGATGGAGCAGGCAGACTTCACCATGCTC...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCTTCATCCGGCAGCTTTaGAGCAACCCCATCATCTCG +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFFIRQL*SNPIIS
Trigger: CGAGATGATGGGGTTGCTGCAAAGCTGCCGGATGAA...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGATCCCTTCTACGTTTTaGTTGGCTTTCTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWIPSTF*LAFWIR
Trigger: CCGGATCCAGAAAGCCAAGCAAAACGTAGAAGGGAT...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTGACATCATCAGGTTCTaGAGCTGCACCTGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACDIIRF*SCTWLS
Trigger: GGACAACCAGGTGCAGCTGCAGAACCTGATGATGTC...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACACACCAGCCTCATGGTaGGATTCAAGGGAATTCGCT +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYTPASW*DSREFA
Trigger: AGCGAATTCCCTTGAATCGCACCATGAGGCTGGTGT...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCAGCATCACGGGCCATaGCTTCTCCATGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLQHHGP*LLHEQV
Trigger: GACCTGCTCATGGAGAAGGCATGGCCCGTGATGCTG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGTTCTCCAGCACCCCCTaGAGCATGGCTGAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVFSSTP*SMAEVV
Trigger: CACGACCTCAGCCATGCTGCAGGGGGTGCTGGAGAA...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGGCGCGAGAGGCTCTaGTTCCCACTGCCACCCACG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRRERL*FPLPPT
Trigger: CGTGGGTGGCAGTGGGAAGCAGAGCCTCTCGCGCCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAAGAATCACCTTGAGCTaGCTGCGTACTTTCTCGATG +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQRITLS*LRTFSM
Trigger: CATCGAGAAAGTACGCAGGCAGCTCAAGGTGATTCT...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGTGTCCTTGGGGATCTTaGCCCCAGGCGCTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVCPWGS*PQALSG
Trigger: TCCTGACAGCGCCTGGGGGCAAGATCCCCAAGGACA...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTACCATGCACAGCTTCTaGAGGGCGGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFTMHSF*RAVLFF
Trigger: GAAGAACAAGACCGCCCTGCAGAAGCTGTGCATGGT...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGTCATGCAGCGCACCATaGACAGCTTCTGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHESCSAP*TASAGR
Trigger: CCGCCCTGCAGAAGCTGTGCATGGTGCGCTGCATGA...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGATCTCCAGGGTGTCCTaGGTGAAAAGATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVISRVS*VKRSSA
Trigger: GGCGCTGGATCTTTTCACGCAGGACACCCTGGAGAT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCACGCGGATGTACTCTaGCAGGTAGGTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLHADVL*QVGPAQ
Trigger: CTGTGCAGGACCTACCTGGCAGAGTACATCCGCGTG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCCGTGACACCCCCGTaGCTGCTCCCGAGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPVTPP*LLPSLS
Trigger: AGACAGACTCGGGAGCAGGCACGGGGGTGTCACGGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGCAGGATCCACTTGGCTaGCTTCTCTTTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPQDPLG*LLFGLQ
Trigger: CTGAAGACCAAAGAGAAGGCAGCCAAGTGGATCCTG...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTTCGTTCTTCAGCCTGTaGACCTGCTTCACAATGTCT +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCSFFSL*TCFTMS
Trigger: AGACATTGTGAAGCAGGTCCACAGGCTGAAGAACGA...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAATCGTTCTTCAGCCTGTaGACCTGCTTCACAATGTCT +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQSFFSL*TCFTMS
Trigger: AGACATTGTGAAGCAGGTCCACAGGCTGAAGAACGA...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCTATCTTGTTCACCTTaGGCCTGTTTAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWLSCSP*ACLAAR
Trigger: ACGAGCAGCTAAACAGGCCCAAGGTGAACAAGATAG...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCAGTCATCTCGATGATCTaGTTGCAGAACTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAVISMI*LQNSRR
Trigger: CCTCCGGGAGTTCTGCAACCAGATCATCGAGATGAC...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCAGAGGCCGCCATCTaGGCATCGTACATGAGTTTG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVAEAAI*ASYMSL
Trigger: CAAACTCATGTACGATGCCCAGATGGCGGCCTCTGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCTTCTCCGCGCTCTCTaGAATCTCTTTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVLLRAL*NLFLLL
Trigger: CAGCAGCAGAAAGAGATTCCAGAGAGCGCGGAGAAG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCCATTCCAGAACAATGTaGTCTCTGCGCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVHSRTM*SLRSAA
Trigger: AGCTGCTGAGCGCAGAGACCACATTGTTCTGGAATG...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTTTTGCTTGGCTTTCTaGATCCGGTTCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWFCLAF*IRFCRL
Trigger: CAACCTGCAGAACCGGATCCAGAAAGCCAAGCAAAA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTGGTGTCTTGGGGATaGTGTCGTCCGTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVVVSWG*CRPSWC
Trigger: ACACCAAGACGGACGACACCATCCCCAAGACACCAC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCTGGTGTTCTCACAGCTaGACACCTCCTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVWCSHS*TPPHTA
Trigger: AGCTGTATGAGGAGGTGTCCAGCTGTGAGAACACCA...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTGTCTCCCTCCTTAAGTaGCTTCTTCAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAVSLLK*LLQGCS
Trigger: CGAACAGCCCTGAAGAAGCCACTTAAGGAGGGAGAC...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCAGCTGCTTGTAGTCTaGCACCGTGACCTCGAACAG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVQLLVV*HRDLEQ
Trigger: CTGTTCGAGGTCACGGTGCCAGACTACAAGCAGCTG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGCTTCTGCTGCCAGCTaGTCACCTCCTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCASAAS*SPPSGS
Trigger: ACTTCCTGAAGGAGGTGACCAGCTGGCAGCAGAAGC...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCTTCTGCTGCCAGCTaGTCACCTCCTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVASAAS*SPPSGS
Trigger: ACTTCCTGAAGGAGGTGACCAGCTGGCAGCAGAAGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGGCTTCCACCACGTTTaGTGTCTTCACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCGFHHV*CLHSIL
Trigger: GAGGATGCTGTGAAGACACCAAACGTGGTGGAAGCC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGGAACGCCAGCCTCTTaGTCTCCAGATATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCGTPAS*SPDIQP
Trigger: TGGCTGAATATCTGGAGACCAAGAGGCTGGCGTTCC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGACAAAATAGAACCGTaGGAACGCCAGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYDKIEP*ERQPLG
Trigger: ACCAAGAGGCTGGCGTTCCCACGGTTCTATTTTGTC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGGCTGTCGAAGAGCTTaGACAGGTGGCGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEGCRRA*TGGGSP
Trigger: AGGTGAGCCGCCACCTGTCCAAGCTCTTCGACAGCC...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGTTTCGTGGCGCAACGTaGCGCGCATTCGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVFRGAT*RAFGPA
Trigger: TGCTGGACCGAATGCGCGCCACGTTGCGCCACGAAA...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCGGGACTCAATCCACATaGGATCTATGTCCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFGTQST*DLCPRP
Trigger: TGGACGGGGACATAGATCCCATGTGGATTGAGTCCC...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTTGCGGATGGTTTCTGTaGTGTGGACTAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVCGWFL*CGLERP
Trigger: AGGCCTCTCTAGTCCACACCACAGAAACCATCCGCA...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTCATACCAGTGCCTGTaGTCCATGTGCTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSYQCL*SMCWRM
Trigger: CATCCGCCAGCACATGGACCACAGGCACTGGTATGA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGAGGTGAGGGCCTCCTaGCCGGGGAAGCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKEVRAS*PGKLTA
Trigger: TGCTGTGAGCTTCCCCGGCCAGGAGGCCCTCACCTC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGAGGGACTTCACCTGTaGCCGCATGGAGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVEGLHL*PHGGDD
Trigger: ATCATCTCCTCCATGCGGCCACAGGTGAAGTCCCTC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACTCAGGGTCAAAGGTaGGGTTGCCTTGGTACGGCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTQGQR*GCLGTA
Trigger: AGCCGTACCAAGGCAACCCCACCTTTGACCCTGAGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTGTTGCACAGGATGGTaGCATTCTCTGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPCCTGW*HSLWTC
Trigger: GCATGTCCACAGAGAATGCCACCATCCTGTGCAACA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAACAGCGGCCAGGAGCTaGTCCTCCAGCCCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKTAARS*SSSPSL
Trigger: CAGAGACGGGCTGGAGGACCAGCTCCTGGCCGCTGT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGCGCCGTCTTCTGGATaGCTTTCTCAAACACCACGT +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCAPSSG*LSQTPR
Trigger: ACGTGGTGTTTGAGAAAGCCATCCAGAAGACGGCGC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGCTTTTTCCACCTCTTaGCCGAGCCCTCAATGTCAC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFAFSTS*PSPQCH
Trigger: GTGACATTGAGGGCTCGGCCAAGAGGTGGAAAAAGC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTGCTTTTTCCACCTCTTaGCCGAGCCCTCAATGTCAC +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVAFSTS*PSPQCH
Trigger: GTGACATTGAGGGCTCGGCCAAGAGGTGGAAAAAGC...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCAGGTGAATGTTCTGTaGCAAGGAGCCCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCQVNVL*QGAPHL
Trigger: CAGGTGAGGGGCTCCTTGCCACAGAACATTCACCTG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCATAGAACAGAGCAGTaGACAAGTCTTCCATGTCGG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWHRTEQ*TSLPCR
Trigger: CCGACATGGAAGACTTGTCCACTGCTCTGTTCTATG...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCAGCAGGGTTTTCCCTTTaGTCTTGCCTCCCATCACAA +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAAGFSL*SCLPSQ
Trigger: TTGTGATGGGAGGCAAGATCAAAGGGAAAACCCTGC...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGCAGGGTTTTCCCTTTaGTCTTGCCTCCCATCACAA +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCAGFSL*SCLPSQ
Trigger: TTGTGATGGGAGGCAAGATCAAAGGGAAAACCCTGC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGAGCACGTCCCGGATTTaGTGGGACCAGTCGATGATG +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTESTSRI*WDQSMM
Trigger: CATCATCGACTGGTCCCATCAAATCCGGGACGTGCT...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCTCCCCATAGCTCTTaGGCAGTTCGATGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPPHSS*AVRWFA
Trigger: AGCAAACCATCGAACTGCTCAAGAGCTATGGGGAGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTATTTCAAACTTCACCTaGGTGGCCTGCATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIISNFT*VACMSC
Trigger: ACAGCTCATGCAGGCCACTCAGGTGAAGTTTGAAAT...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGGCACTTCGTCAGACTTaGGCATCATGGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTEALRQT*ASWCLS
Trigger: GGACAGGCACCATGATGCTCAAGTCTGACGAAGTGC...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGGTGCAGATGGTCATaGTCTTCATCCTGTCACCGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVWCRWS*SSSCHR
Trigger: CCGGTGACAGGATGAAGATCATGACCATCTGCACCA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGCTGCGACTGCCAGGTaGAGGCCTGCGAACTCTCCA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKAATAR*RPANSP
Trigger: TGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTCCTCGGCCACAAGCATaGTCTCACAAATCAACTCGA +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAPRPQA*SHKSTR
Trigger: TCGAGTTGATTTGTGAGATCATGCTTGTGGCCGAGG...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGGGCGTTTTTCTCCGTaGGCAGGCACTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHGRFSP*AGTPAG
Trigger: ACCTGCTGGAGTGCCTGCTCACGGAGAAAAACGCCC...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCTCTTGGACATCTCGTTaGCGGTGGTGTGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLSWTSR*RWCARR
Trigger: CCTACGTGCACACCACCGTCAACGAGATGTCCAAGA...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATTTTAGGTCGTCCACCTaGGAGGCCGTGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHFRSST*EAVLCS
Trigger: GCTGCAGAGCACGGCCTCTCAGGTGGACGACCTAAA...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCTGCAATCTTGTTTTTaGTCCGGGACAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCLQSCF*SGTVSP
Trigger: AGGAGAAACTGTCCCGGATCAAAAACAAGATTGCAG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCTTGAGCCAAGAAGATaGGCTTGTCCCGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLEPRR*ACPARR
Trigger: TCTTCGAGCGGGACAAGCTCATCTTCTTGGCTCAAG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTCACTGTCCAAGTTCTTaGACTCATCCATCTCCGACA +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIHCPSS*THPSPT
Trigger: TGTCGGAGATGGATGAGTTCAAGAACTTGGACAGTG...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGCCCTCACCTGCAGAATaGCCCAGTGTCCCTTTTCGG +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVPSPAE*PSVPFR
Trigger: CCGAAAAGGGACACTGGGTCATTCTGCAGGTGAGGG...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCGAAGAGGATGCACTTaGACTCGATCTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCRRGCT*TRSPWC
Trigger: GCACCAAGGAGATCGAGTTCAAGTGCATCCTCTTCG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCGAAGAGGATGCACTTaGACTCGATCTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRRGCT*TRSPWC
Trigger: GCACCAAGGAGATCGAGTTCAAGTGCATCCTCTTCG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGATTGTTGAAGGGGTATaGTCGATTCCAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVIVEGV*SIPALG
Trigger: GCCCAGGGCTGGAATCGATCATACCCCTTCAACAAT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCTCGGAACAGCTTCTCTaGGGTGACAGTCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLSEQLL*GDSQEA
Trigger: GGCTTCCTGACTGTCACCTCAGAGAAGCTGTTCCGA...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCATCTCGCCACCAGGTaGATGTTCTGCAGAATGACC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVHLATR*MFCRMT
Trigger: GGTCATTCTGCAGAACATTCACCTGGTGGCGAGATG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGACCTCCTCCACTACTaGAATCAACTGGTCCACGGT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVDLLHY*NQLVHG
Trigger: ACCGTGGACCAGTTGATTGCAGTAGTGGAGGAGGTC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTCAGGTATAAGACGATaGCATTTGCTTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWSGIRR*HLLPSA
Trigger: GGCTGAAGGAAGCAAATGGCATCGTCTTATACCTGA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTCTCCTCCAACAGGATaGGCAGGGGCTTCAGGTATA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSPPTG*AGASGI
Trigger: TATACCTGAAGCCCCTGCGCATCCTGTTGGAGGAGA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGAGCATGGTGAAGTCTaGCTGCTCCATCTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVEHGEV*LLHLLQ
Trigger: TTGGAGGAGATGGAGCAGGCAGACTTCACCATGCTC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACGGTATCTGGCCATCTaGAGAGGCCGCCATCTGGGC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRYLAI*RGRHLG
Trigger: GCCCAGATGGCGGCCTCTGCAGATGGCCAGATACCG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGTTGGCTGACCACTCCTaGATGGCCTGGGTGATCCCT +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHELADHS*MAWVIP
Trigger: AGGGATCACCCAGGCCATGCAGGAGTGGTCAGCCAA...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGCTTTATCCAGCTCCATaGGGATCTCAAATAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLLYPAP*GSQIGE
Trigger: CTCCCCTATTTGAGATCCGCATGGAGCTGGATAAAG...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTCTTTATCCAGCTCCATaGGGATCTCAAATAGGGGAG +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQILYPAP*GSQIGE
Trigger: CTCCCCTATTTGAGATCCGCATGGAGCTGGATAAAG...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACTTGTAGTTCAATCTaGCCTTGGCCAGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTCSSI*PWPGEG
Trigger: TCCCTCGCCTGGCCAAGGGCAGATTGAACTACAAGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGTGTTGAGCAAGGTCTaGTTGAAGGGGCGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLVLSKV*LKGRQS
Trigger: TGACTGCCGCCCCTTCAAGCAGACCTTGCTCAACAC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGACTTTCATCAGGTaGCCCATGACCTCTACCAGC +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVALTFIR*PMTSTS
Trigger: GCTGGTAGAGGTCATGGGGCACCTGATGAAAGTCAA...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCTATCGGTGGCCACCTaGCTCTCCTTGACTTTCATC +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCLSVAT*LSLTFI
Trigger: GATGAAAGTCAAGGAGAGGCAGGTGGCCACCGATAG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGTTGGTGTTGGTCCACTaGTCTGGCAGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHELVLVH*SGSSCS
Trigger: GCTGCAGGAGCTGCCAGAGCAGTGGACCAACACCAA...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCAAACTCGTCCTCCTTaGTGTACATCCCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVQTRPP*CTSPAQ
Trigger: TTGGGCTGGGGATGTACAGCAAGGAGGACGAGTTTG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCCAGCGGTGTCGAAGCTaGGACTGCCAGGTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSQRCRS*DCQVKA
Trigger: GGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTG...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACACTTGGGACCCTCGTaGGTGAGGTTGGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKHLGPS*VRLARS
Trigger: GGACCTGGCCAACCTCACGCACGAGGGTCCCAAGTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTTGGCTTTCTCTGACTaGACCTTGCGCCTCTCAATC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFLAFSD*TLRLSI
Trigger: GATTGAGAGGCGCAAGGTGCAGTCAGAGAAAGCCAA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGCAGCATCACGGGCCATaGCTTCTCCATGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVQHHGP*LLHEQV
Trigger: GACCTGCTCATGGAGAAGGCATGGCCCGTGATGCTG...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGTGCAAGGCCAGGGCTaGAGTCACCAGGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKVQGQG*SHQVAA
Trigger: AGCAGCCACCTGGTGACTGCAGCCCTGGCCTTGCAC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCGTCCAGGGCCTCTTGTaGTGCCAAGAGCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSVQGLL*CQERWL
Trigger: GAGCCAGCGCTCTTGGCAGCACAAGAGGCCCTGGAC...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGTCCAGGGCCTCTTGTaGTGCCAAGAGCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKVQGLL*CQERWL
Trigger: GAGCCAGCGCTCTTGGCAGCACAAGAGGCCCTGGAC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACCATGCACAGCTTCTaGAGGGCGGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTMHSF*RAVLFF
Trigger: GAAGAACAAGACCGCCCTGCAGAAGCTGTGCATGGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGGCAGGTTGGCATACATaGCCGTGGGAGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVAGWHT*PWEAHW
Trigger: CCAATGAGCCTCCCACGGGCATGTATGCCAACCTGC...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACTCGATCTCCTTGGTaGACATCTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTRSPW*TSPGCP
Trigger: AGGACACCCTGGAGATGTGCACCAAGGAGATCGAGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCTCTGTCTCTTTGGGCTaGATTTCTAGGACGGTTCGG +
Preference number: 4 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFSVSLG*ISRTVR
Trigger: CCGAACCGTCCTAGAAATGCAGCCCAAAGAGACAGA...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGAGCAGCGCCACAGCTaGCAGGATCCACTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKEQRHS*QDPLGC
Trigger: GCAGCCAAGTGGATCCTGGCAGCTGTGGCGCTGCTC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTCATCTCGATGATCTaGTTGCAGAACTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVVISMI*LQNSRR
Trigger: CCTCCGGGAGTTCTGCAACCAGATCATCGAGATGAC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGAGGCTTGGCAGAAGATaGTGGCCAGCCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHERLGRR*WPASCP
Trigger: TGGACAGGAGGCTGGCCACCATCTTCTGCCAAGCCT...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGTTTCAGGTACTTCATaGACACCTCAAGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYVSGTS*TPQASP
Trigger: AGGAGAGGCTTGAGGTGTCCATGAAGTACCTGAAAC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCCTCTACCCACTGCTaGTATTTCTTCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPSTHC*YFFIRQ
Trigger: CTGCCGGATGAAGAAATACCAGCAGTGGGTAGAGGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGTTGAAGTGGCAGTCCTaGTCCACACCCTCTACCCAC +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTELKWQS*STPSTH
Trigger: GTGGGTAGAGGGTGTGGACCAGGACTGCCACTTCAA...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATTGCCCCAGGTTGAAGTaGCAGTCCTGGTCCACACCC +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHCPRLK*QSWSTP
Trigger: GGGTGTGGACCAGGACTGCCACTTCAACCTGGGGCA...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCACTCCTGCATGGCCTaGGTGATCCCTTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCHSCMA*VIPSTF
Trigger: AAACGTAGAAGGGATCACCCAGGCCATGCAGGAGTG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATACCGCTTGTTCAGGTTaGCCACCCTGCCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHTACSG*PPCRPG
Trigger: ACCTGGACGGCAGGGTGGCCAACCTGAACAAGCGGT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCTCTCAAAGGAGTCCTaGTACTCCTCAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLSKES*YSSATF
Trigger: GAAGGTGGCTGAGGAGTACCAGGACTCCTTTGAGAG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGTGGTGTCTTGGGGATaGTGTCGTCCGTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLVVSWG*CRPSWC
Trigger: ACACCAAGACGGACGACACCATCCCCAAGACACCAC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTCTCCCTCCTTAAGTaGCTTCTTCAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVVSLLK*LLQGCS
Trigger: CGAACAGCCCTGAAGAAGCCACTTAAGGAGGGAGAC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGAATGGCCAGTTTCTTaGTGTTGGTCCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFEWPVS*CWSTAL
Trigger: CAGAGCAGTGGACCAACACCAAGAAACTGGCCATTC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTTGTCCTTCCACTTGGTaGTCTTCCAGTCGTCGATGC +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCCPSTW*SSSRRC
Trigger: GCATCGACGACTGGAAGACCACCAAGTGGAAGGACA...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGAGTGTGACAGGTACTTaGACATCATCAGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWSVTGT*TSSGSA
Trigger: TGCAGAACCTGATGATGTCCAAGTACCTGTCACACT...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGAATCCTCTGGTAGCTaGGCTCTGATGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCESSGS*ALMSSE
Trigger: CTCAGAAGACATCAGAGCCCAGCTACCAGAGGATTC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGGCTTCCACCACGTTTaGTGTCTTCACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVGFHHV*CLHSIL
Trigger: GAGGATGCTGTGAAGACACCAAACGTGGTGGAAGCC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGCGGGGTCGTTTCCGTTaGAGAGAATATCAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLRGRFR*REYQAD
Trigger: ATCTGCTTGATATTCTCTCCAACGGAAACGACCCCG...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGAGCGTCACAGATGTTaGCGAAGCAGTGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYERHRC*RSSASF
Trigger: AAAAGAAGCACTGCTTCGCCAACATCTGTGACGCTC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGGCCCGAATTGCATCTTaGACACACTTTACCTGTACA +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWARIAS*THFTCT
Trigger: TGTACAGGTAAAGTGTGTCCAAGATGCAATTCGGGC...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGGGCACGTCCAGAGCTaGGAAGAGGTCGCCGATCAG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKGHVQS*EEVADQ
Trigger: CTGATCGGCGACCTCTTCCCAGCTCTGGACGTGCCC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCAAGTACCGGATGCGGATaGTTTCTGTGGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVASTGCG*FLWCGL
Trigger: TAGTCCACACCACAGAAACCATCCGCATCCGGTACT...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGCTGCAGTCACCAGGTaGCTGCTCAGCCGCTGGATC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKAAVTR*LLSRWI
Trigger: GATCCAGCGGCTGAGCAGCCACCTGGTGACTGCAGC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTTTCTTGAGTGTGATCTaGAAGACGTCCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAFLSVI*KTSRAL
Trigger: CAGTGCCCTGGACGTCTTCCAGATCACACTCAAGAA...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGAGGGACTTCACCTGTaGCCGCATGGAGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLEGLHL*PHGGDD
Trigger: ATCATCTCCTCCATGCGGCCACAGGTGAAGTCCCTC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTACCAAAGCGTCTTCTaGCCACTCGTGGAACCAGTT +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFYQSVF*PLVEPV
Trigger: AACTGGTTCCACGAGTGGCCAGAAGACGCTTTGGTA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGCTCTAGAAAGGTCTTaGGCGTGGTGTAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCALERS*AWCSCS
Trigger: GCTACAACTACACCACGCCCAAGACCTTTCTAGAGC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGATCACCCTATTGGTaGCATCTGCCTCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRSPYW*HLPPAD
Trigger: GTCAGCAGGAGGCAGATGCCACCAATAGGGTGATCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGCACAGGGTAACGCCCTaGCTCTTGAAGTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTEHRVTP*LLKFST
Trigger: GGTGGAGAACTTCAAGAGCCAGGGCGTTACCCTGTG...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTTGTTGCACAGGATGGTaGCATTCTCTGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACCCTGW*HSLWTC
Trigger: GCATGTCCACAGAGAATGCCACCATCCTGTGCAACA...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTATCCACTTGATGCCTTaGAGCTGGGCATCCACAATC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFIHLMP*SWASTI
Trigger: GATTGTGGATGCCCAGCTCCAAGGCATCAAGTGGAT...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGTTCCTGCCCAGCAGTaGGTCGAGCACGGGGTCTAC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKVPAQQ*VEHGVY
Trigger: GTAGACCCCGTGCTCGACCCACTGCTGGGCAGGAAC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCATTGGCTGTGTGCTTaGTGGTCTCCAGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVHWLCA*WSPGFP
Trigger: TGGAAAACCTGGAGACCACCAAGCACACAGCCAATG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTTCTCCTCAATTTCATTaGCTGTGTGCTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCSPQFH*LCAWWS
Trigger: AGACCACCAAGCACACAGCCAATGAAATTGAGGAGA...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTCTCTTTGTAGGACTTaGAGAACTCCACGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSLCRT*RTPRSG
Trigger: GCCGGAGCGTGGAGTTCTCCAAGTCCTACAAAGAGA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCCCAGGGACACGTTGTaGAGTTTCCCATTGTCTATG +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVPRDTL*SFPLSM
Trigger: CATAGACAATGGGAAACTCCACAACGTGTCCCTGGG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCCATGTTGAAGGTCTCTaGGATCTTCTCCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVHVEGL*DLLQDV
Trigger: GACATCCTGGAGAAGATCCCAGAGACCTTCAACATG...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTCCTCCCGATTCTTCTTaGTCACTTCCACAGACAGAC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFPPDSS*SLPQTD
Trigger: GTCTGTCTGTGGAAGTGACCAAGAAGAATCGGGAGG...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCAGGGTTTTCCCTTTaGTCTTGCCTCCCATCACAA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVAGFSL*SCLPSQ
Trigger: TTGTGATGGGAGGCAAGATCAAAGGGAAAACCCTGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGATGGTCTGCACGCGGTaGAAGAAGGAATTCATTCGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVMVCTR*KKEFIR
Trigger: CCGAATGAATTCCTTCTTTCACCGCGTGCAGACCAT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATCCTCCATGCTGGACATaGCCGGGTGCTCGATGTGTT +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHPPCWT*PGARCV
Trigger: AACACATCGAGCACCCGGTCATGTCCAGCATGGAGG...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGGCCAGGCGAGGGATaGGCCTGGCCACATTGTAGA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKWPGEG*AWPHCR
Trigger: TCTACAATGTGGCCAGGCTCATCCCTCGCCTGGCCA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCATCAGGTGCCCCATaGCCTCTACCAGCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSSGAP*PLPARR
Trigger: ACGACGGGCTGGTAGAGGTCATGGGGCACCTGATGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCATTTCAAACTTCACCTaGGTGGCCTGCATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCISNFT*VACMSC
Trigger: ACAGCTCATGCAGGCCACTCAGGTGAAGTTTGAAAT...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCTCCTTCAGGAAGTGTaGCAGGTACTTGGACATCAT +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCLLQEV*QVLGHH
Trigger: ATGATGTCCAAGTACCTGTCACACTTCCTGAAGGAG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTCTCCTTCAGGAAGTGTaGCAGGTACTTGGACATCAT +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACLLQEV*QVLGHH
Trigger: ATGATGTCCAAGTACCTGTCACACTTCCTGAAGGAG...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGCAAACCAGATGGAGATaGCCGAGTCTGCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEQTRWR*PSLRWT
Trigger: TGTCCACCGCAGACTCGGTCATCTCCATCTGGTTTG...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGGCTCTGATGTCTTCTaGGCCGATGAAGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLGSDVF*ADEDAL
Trigger: GAGAGCATCTTCATCGGCTCAGAAGACATCAGAGCC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCACCTCCATCAAAGCTTTaGATTCCTGGTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAPPSKL*IPGQWR
Trigger: ACGCCATTGACCAGGAATTCAAAGCTTTGATGGAGG...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTCCTCCATCAAAGCTTTaGATTCCTGGTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFPPSKL*IPGQWR
Trigger: ACGCCATTGACCAGGAATTCAAAGCTTTGATGGAGG...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCTCGGCCACAAGCATaGTCTCACAAATCAACTCGA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPRPQA*SHKSTR
Trigger: TCGAGTTGATTTGTGAGATCATGCTTGTGGCCGAGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCTTCTGCCTGAAGCTTaGGCTCCACGATGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLLLPEA*APRCSV
Trigger: AACAGAGCATCGTGGAGCTCAAGCTTCAGGCAGAAG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATACCGAGTGTCGGACTTaGAGCAGCTCTTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHTECRT*SSSSSW
Trigger: CCAGCTGGAAGAGCTGCTTCAAGTCCGACACTCGGT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGGGCGTTTTTCTCCGTaGGCAGGCACTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKGRFSP*AGTPAG
Trigger: ACCTGCTGGAGTGCCTGCTCACGGAGAAAAACGCCC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCCGCATGGAGGAGATaGTGTTTTCAAGGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVAAWRR*CFQGLR
Trigger: ACGAAGACCTTGAAAACATCATCTCCTCCATGCGGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAGGTTCTGATAGAGTTTaGTCTGCTCTAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQGSDRV*SALERS
Trigger: AGACCTTTCTAGAGCAGATCAAACTCTATCAGAACC...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCATCTGCCTCCTGCTaGCACTTGATTTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVASASC*HLIFSA
Trigger: AGCTGAGAAAATCAAGTGTCAGCAGGAGGCAGATGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTACCTGGAAGGTGACTTaGGCCAAGAAGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCTWKVT*AKKMSL
Trigger: CAAGCTCATCTTCTTGGCTCAAGTCACCTTCCAGGT...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTTCAGCCTGTGGACCTaGTTCACAATGTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFFSLWT*FTMSSD
Trigger: GTCAGAAGACATTGTGAAGCAGGTCCACAGGCTGAA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACGCTGGATGAGTGGCTaGCCCAGGTTGAAGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRWMSG*PRLKWQ
Trigger: CTGCCACTTCAACCTGGGGCAGCCACTCATCCAGCG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGAACAATGTGGTCTCTaGGCTCAGCAGCTTCACGTC +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLEQCGL*AQQLHV
Trigger: GACGTGAAGCTGCTGAGCGCAGAGACCACATTGTTC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATTCAGGGGCTCAAACATaGTATCGGTGGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHSGAQT*YRWPPA
Trigger: GGCAGGTGGCCACCGATAGCATGTTTGAGCCCCTGA...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTTTCTCTCTGAATTCGTaGTGCTTGAGCTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCFSLNS*CLSSNC
Trigger: ACAGTTTGAGCTCAAGCAGCACGAATTCAGAGAGAA...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACCAGTCAATGTCCATCTaGTCCACATTGATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYQSMSI*STLMSF
Trigger: GAAGGACATCAATGTGGAGCAGATGGACATTGACTG...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCGTGCCAGCAGGGCCTaGAGGGGCTCCGCCCATGAT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRASRA*RGSAHD
Trigger: ATCATGGGCGGAGCCCCTGCAGGCCCTGCTGGCACG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCTCCGTCTTGCCCGTaGCAGCAGGGCCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSPSCP*QQGLQG
Trigger: CCCCTGCAGGCCCTGCTGGCACGGGCAAGACGGAGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGTTTCTTGGCCCGAATTaGATCTTGGACACACTTTAC +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWFLGPN*ILDTLY
Trigger: GTAAAGTGTGTCCAAGATGCAATTCGGGCCAAGAAA...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGAGCACCTGGTCCTCTaGCCGGGTGGGGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFEHLVL*PGGVSP
Trigger: AGGGGAGACCCCACCCGGGCAGAGGACCAGGTGCTC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCACAAAGCTGTCTTCTaGCTGAAGCTTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVHKAVF*LKLELH
Trigger: GTGGAGCTCAAGCTTCAGGCAGAAGACAGCTTTGTG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTGGCTTTCTCTGACTaGACCTTGCGCCTCTCAATC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLAFSD*TLRLSI
Trigger: GATTGAGAGGCGCAAGGTGCAGTCAGAGAAAGCCAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTCTCCAGCACCCCCTaGAGCATGGCTGAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKFSSTP*SMAEVV
Trigger: CACGACCTCAGCCATGCTGCAGGGGGTGCTGGAGAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGTTCAGGGTCAGTTTCTaGCGGTCATACCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTEFRVSF*RSYQCL
Trigger: CAGGCACTGGTATGACCGGCAGAAACTGACCCTGAA...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAATCAGCACCAGGAACTaGTCCTCGGCCACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKISTRN*SSATWE
Trigger: CTCCCAGGTGGCCGAGGAGCAGTTCCTGGTGCTGAT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTAGAATCACCTTGAGCTaGCTGCGTACTTTCTCGATG +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFRITLS*LRTFSM
Trigger: CATCGAGAAAGTACGCAGGCAGCTCAAGGTGATTCT...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTCCTTGGGGATCTTaGCCCCAGGCGCTGTCAGGA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKCPWGS*PQALSG
Trigger: TCCTGACAGCGCCTGGGGGCAAGATCCCCAAGGACA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCTTCCTCCAGGGCCTaGCTCTTGGGCGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFASSRA*LLGATS
Trigger: CGACGTGGCGCCCAAGAGGCAGGCCCTGGAGGAAGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTGTTGCTTTTTCAAATaGCGAGGTAAGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWCCFFK*RGKVAQ
Trigger: CTGAGCAACCTTACCTCGGCATTTGAAAAAGCAACA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTATTTCATTGGCTGTGTaGTTGGTGGTCTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIISLAV*LVVSRF
Trigger: AAACCTGGAGACCACCAAGCACACAGCCAATGAAAT...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCTCATGCAGCGCACCATaGACAGCTTCTGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSSCSAP*TASAGR
Trigger: CCGCCCTGCAGAAGCTGTGCATGGTGCGCTGCATGA...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACAGGAAGCCGATCTCTaGGTTGGGGTGCAGGCCGTA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKQEADL*VGVQAV
Trigger: TACGGCCTGCACCCCAACGCAGAGATCGGCTTCCTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGGCCAGTAGCAGCTTTTaGCTTTTTCCAGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLASSSF*LFPGSQ
Trigger: TTGAGATCCTGGAAAAAGCCAAAAGCTGCTACTGGC...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGCCCCAGGTTGAAGTaGCAGTCCTGGTCCACACCC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKCPRLK*QSWSTP
Trigger: GGGTGTGGACCAGGACTGCCACTTCAACCTGGGGCA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCATTCCAGAACAATGTaGTCTCTGCGCTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVHSRTM*SLRSAA
Trigger: AGCTGCTGAGCGCAGAGACCACATTGTTCTGGAATG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCACCGCTTGTTCAGGTTaGCCACCCTGCCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSTACSG*PPCRPG
Trigger: ACCTGGACGGCAGGGTGGCCAACCTGAACAAGCGGT...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTCCACAACCATGGCTTaGATTCTCACACCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSTTMA*ILTPAS
Trigger: GGAAGCTGGTGTGAGAATCCAAGCCATGGTTGTGGA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTTCCACAACCATGGCTTaGATTCTCACACCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCSTTMA*ILTPAS
Trigger: GGAAGCTGGTGTGAGAATCCAAGCCATGGTTGTGGA...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGGTGTTCTCACAGCTaGACACCTCCTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVWCSHS*TPPHTA
Trigger: AGCTGTATGAGGAGGTGTCCAGCTGTGAGAACACCA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCTCTGCTTCACCTGAATaGCCAGTTTCTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCSASPE*PVSWCW
Trigger: CCAACACCAAGAAACTGGCCATTCAGGTGAAGCAGA...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGTGTCCTTCCACTTGGTaGTCTTCCAGTCGTCGATGC +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTECPSTW*SSSRRC
Trigger: GCATCGACGACTGGAAGACCACCAAGTGGAAGGACA...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCTCGTCCTCATACTTGTaGAGGTTCAGCTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCSSSYL*RFSCSR
Trigger: TCTGCTACAGCTGAACCTCCACAAGTATGAGGACGA...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGAATCCTCTGGTAGCTaGGCTCTGATGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCESSGS*ALMSSE
Trigger: CTCAGAAGACATCAGAGCCCAGCTACCAGAGGATTC...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGAATCCTCTGGTAGCTaGGCTCTGATGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVESSGS*ALMSSE
Trigger: CTCAGAAGACATCAGAGCCCAGCTACCAGAGGATTC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGACAAAATAGAACCGTaGGAACGCCAGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVDKIEP*ERQPLG
Trigger: ACCAAGAGGCTGGCGTTCCCACGGTTCTATTTTGTC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCGGGGTCGTTTCCGTTaGAGAGAATATCAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVRGRFR*REYQAD
Trigger: ATCTGCTTGATATTCTCTCCAACGGAAACGACCCCG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGGCTGTCGAAGAGCTTaGACAGGTGGCGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKGCRRA*TGGGSP
Trigger: AGGTGAGCCGCCACCTGTCCAAGCTCTTCGACAGCC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTCAAACACCAGCCTCATaGTGCGATTCAAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFQTPAS*CDSREF
Trigger: GAATTCCCTTGAATCGCACCATGAGGCTGGTGTTTG...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGGTGGCTGTCCTCAGGTaGCTGATCTCAAACACCAGC +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVVAVLR*LISNTS
Trigger: GCTGGTGTTTGAGATCAGCCACCTGAGGACAGCCAC...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGCTGATCCTGGAACATaGCGCCCCCAAAGGCCCAGA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKADPGT*RPQRPR
Trigger: TCTGGGCCTTTGGGGGCGCCATGTTCCAGGATCAGC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTGTAGTAGTCAAAAATaGTCCCCTGCGAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPCSSQK*SPARVT
Trigger: AGTTACCCTCGCAGGGGACCATTTTTGACTACTACA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGCGGATGAGGGTGTGTaGGGCCACCGTGCCATACTT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKADEGV*GHRAIL
Trigger: AAGTATGGCACGGTGGCCCCACACACCCTCATCCGC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTGTGGTCCATGTGCTaGCGGATGAGGGTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLWSMC*RMRVCG
Trigger: CCCACACACCCTCATCCGCCAGCACATGGACCACAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAATTCCTTGCGTAAAGTaGCAGAAGATGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LWHFVCCTLTPPPACASQIPCVK*QKMLGL
Trigger: CAAACCCAACATCTTCTGCCACTTTACGCAAGGAAT...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGATTCCTTGCGTAAAGTaGCAGAAGATGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWIPCVK*QKMLGL
Trigger: CAAACCCAACATCTTCTGCCACTTTACGCAAGGAAT...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTCTTGAGTGTGATCTaGAAGACGTCCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVFLSVI*KTSRAL
Trigger: CAGTGCCCTGGACGTCTTCCAGATCACACTCAAGAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGCTCCTCGGCCACCTaGGAGTCCGTCATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKCSSAT*ESVIRN
Trigger: GTTCCTGATGACGGACTCCCAGGTGGCCGAGGAGCA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGTTGCACAGGATGGTaGCATTCTCTGTGGACATGC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVCCTGW*HSLWTC
Trigger: GCATGTCCACAGAGAATGCCACCATCCTGTGCAACA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCATTGGCTGTGTGCTTaGTGGTCTCCAGGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVHWLCA*WSPGFP
Trigger: TGGAAAACCTGGAGACCACCAAGCACACAGCCAATG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCTCTCTTTGTAGGACTTaGAGAACTCCACGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLSLCRT*RTPRSG
Trigger: GCCGGAGCGTGGAGTTCTCCAAGTCCTACAAAGAGA...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGCAGGTGAATGTTCTGTaGCAAGGAGCCCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEQVNVL*QGAPHL
Trigger: CAGGTGAGGGGCTCCTTGCCACAGAACATTCACCTG...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACAGCTAGCCACACAGTaGTGGGCAGGGCGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKQLATQ*WAGRSL
Trigger: CAGACTTCGCCCTGCCCACCACTGTGTGGCTAGCTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCTTCAGCCCTTGGGTaGCATTCATGTAGACGTTTT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPSALG*HSCRRF
Trigger: AAAACGTCTACATGAATGTCACCCAAGGGCTGAAGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCTCCAGGCTCCACTTaGGCTGCCCAGACACGGGAG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFAPGST*AAQTRE
Trigger: CTCCCGTGTCTGGGCAGCTCAAGTGGAGCCTGGAGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGTTCTTCATAAATTCTTaGAGGTCATCCACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWFFINS*RSSTQR
Trigger: CCTTTGGGTGGATGACCTTCAAGAATTTATGAAGAA...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCTCCATCAAAGCTTTaGATTCCTGGTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPPSKL*IPGQWR
Trigger: ACGCCATTGACCAGGAATTCAAAGCTTTGATGGAGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCTCTCAGGGCCCTCATaGGCACCTGGTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLSGPS*APGPLP
Trigger: GGGCAGAGGACCAGGTGCTCATGAGGGCCCTGAGAG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGCTTCTGCCTGAAGCTTaGGCTCCACGATGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHELLPEA*APRCSV
Trigger: AACAGAGCATCGTGGAGCTCAAGCTTCAGGCAGAAG...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGGCCAGGTCCCGCATaGTGGTTGAGAACAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKWPGPA*WLRTGH
Trigger: ATGGCCTGTTCTCAACCATCATGCGGGACCTGGCCA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCACTCCAGGATACGGTTaGTCTTGCAGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLTPGYG*SCRCEP
Trigger: TGGCTCACATCTGCAAGATCAACCGTATCCTGGAGT...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCAGACGAAGGCCGAGATaGGCAGCACATCCCCACACA +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSRRRPR*AAHPHT
Trigger: TGTGTGGGGATGTGCTGCTCATCTCGGCCTTCGTCT...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGGGACCTTTAACTTATTaGTGTAAGGGATCCAGAACT +
Preference number: 4 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWGPLTY*CKGSRT
Trigger: AGTTCTGGATCCCTTACATCAATAAGTTAAAGGTCC...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCCTTTAGCACAATCTTaGACTCATTCTGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCPLAQS*THSEIW
Trigger: CCAAATCTCAGAATGAGTTCAAGATTGTGCTAAAGG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTTGTACACAGAGTAGGTaGTCTCGTCCGTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKACTQSR*SRPSDL
Trigger: TAAATCTGACGGACGAGATCACCTACTCTGTGTACA...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTTGTACACAGAGTAGGTaGTCTCGTCCGTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVCTQSR*SRPSDL
Trigger: TAAATCTGACGGACGAGATCACCTACTCTGTGTACA...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCACTGTCCAAGTTCTTaGACTCATCCATCTCCGACA +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCHCPSS*THPSPT
Trigger: TGTCGGAGATGGATGAGTTCAAGAACTTGGACAGTG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGAAAGGACTGTGGGTTaGAGAAGCCAGCTAGCCACA +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEERTVG*RSQLAT
Trigger: TGTGGCTAGCTGGCTTCTTCAACCCACAGTCCTTTC...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGCGAGCTCCTTCCATaGAGAGCCCGTACACGTAGG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSELLP*RARTRR
Trigger: CCTACGTGTACGGGCTCTTCATGGAAGGAGCTCGCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCCAGGCTGCCCAGGTaGTCGGGGATAGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSRLPR*SGIGSR
Trigger: CCTGCTGCCTATCCCCGAGCACCTGGGCAGCCTGGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCATGGAGTCCAGCGTaGCGTCCAGGCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPWSPA*RPGCPG
Trigger: ACCTGGGCAGCCTGGACGGCACGCTGGACTCCATGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATCAGGTATAAGACGATaGCATTTGCTTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVASGIRR*HLLPSA
Trigger: GGCTGAAGGAAGCAAATGGCATCGTCTTATACCTGA...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGATGGTGAAGTCTGCCTaGTCCATCTCCTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVMVKSA*SISSNR
Trigger: CCTGTTGGAGGAGATGGAGCAGGCAGACTTCACCAT...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCGACAGGGAGATGTTaGCCAGGACCTCCTCGATCT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPTGRC*PGPPRS
Trigger: AGATCGAGGAGGTCCTGGGCAACATCTCCCTGTCGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTCATGTACAGGAGCTTTaGGGAAGACTCCATACAGTT +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAHVQEL*GRLHTV
Trigger: AACTGTATGGAGTCTTCCGCAAAGCTCCTGTACATG...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCACCTCAAGCCTCTCCTaGAGCTCCAGGCTCCACTTG +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSTSSLS*SSRLHL
Trigger: CAAGTGGAGCCTGGAGCTGCAGGAGAGGCTTGAGGT...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGGAACAATGTGGTCTCTaGGCTCAGCAGCTTCACGTC +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVEQCGL*AQQLHV
Trigger: GACGTGAAGCTGCTGAGCGCAGAGACCACATTGTTC...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGATCCCTTCTACGTTTTaGTTGGCTTTCTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVIPSTF*LAFWIR
Trigger: CCGGATCCAGAAAGCCAAGCAAAACGTAGAAGGGAT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTGGCTGACCACTCCTaGATGGCCTGGGTGATCCCT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLADHS*MAWVIP
Trigger: AGGGATCACCCAGGCCATGCAGGAGTGGTCAGCCAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGCAGTTCGATGGTTTaGTTCAGGGGCTCAAACATG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSSSMV*FRGSNM
Trigger: CATGTTTGAGCCCCTGAAGCAAACCATCGAACTGCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCAGCCGAGGTGTGTTaGCCAGGTACTCGTAGGAGT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPAEVC*PGTRRS
Trigger: ACTCCTACGAGTACCTGGGCAACACACCTCGGCTGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCTCCGGCAGCTCCGTaGGCCCTGCGTAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSPAAP*ALRSQD
Trigger: ATCCTGGCTACGCAGGGCGCACGGAGCTGCCGGAGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTGGGGCCACCGTaGCATACTTGTCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKCVGPP*HTCPPL
Trigger: CAGAGGTGGACAAGTATGGCACGGTGGCCCCACACA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCGCTGAGACTTTCTGGTaGAAGGCCAGGGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSAETFW*KARAAV
Trigger: GACTGCAGCCCTGGCCTTGCACCAGAAAGTCTCAGC...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGCTGAGACTTTCTGGTaGAAGGCCAGGGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKAETFW*KARAAV
Trigger: GACTGCAGCCCTGGCCTTGCACCAGAAAGTCTCAGC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGTCACCTCAGGCTCAATaGCCTCTGTTTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVSPQAQ*PLFPPG
Trigger: TCCTGGAGGAAACAGAGGGCATTGAGCCTGAGGTGA...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCAGGTGGCCACGTCTaGGTCATCAGTCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPGGHV*VISQQS
Trigger: ACTCTGCTGACTGATGACGCAGACGTGGCCACCTGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGACTCGATCTCCTTGGTaGACATCTCCAGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHETRSPW*TSPGCP
Trigger: AGGACACCCTGGAGATGTGCACCAAGGAGATCGAGT...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCTGCCAGGTAGGTCCTaGACAGCCGGCGGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLPGRS*TAGGPS
Trigger: ACTGGGACCGCCGGCTGTGCAGGACCTACCTGGCAG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGGAGCGAGTTGTCCATaGAGGAGGGGATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKGASCP*RRGSSP
Trigger: TGGAGAGGATCCCCTCCTCCATGGACAACTCGCTCC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGGTCATCTCGATGATCTaGTTGCAGAACTCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVVISMI*LQNSRR
Trigger: CCTCCGGGAGTTCTGCAACCAGATCATCGAGATGAC...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCAGAAAAGCTTCATGTTaGCACAGCAGAAGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCRKASC*HSRSRR
Trigger: CCTACGACTTCTGCTGTGCCAACATGAAGCTTTTCT...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTAGAAAAGCTTCATGTTaGCACAGCAGAAGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFRKASC*HSRSRR
Trigger: CCTACGACTTCTGCTGTGCCAACATGAAGCTTTTCT...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCAGCTTCAGAAACTCAATaGCCGTCTTGTAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAASETQ*PSCKGP
Trigger: AGGACCTTTACAAGACGGCCATTGAGTTTCTGAAGC...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGCCCTCTACCCACTGCTaGTATTTCTTCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEPSTHC*YFFIRQ
Trigger: CTGCCGGATGAAGAAATACCAGCAGTGGGTAGAGGG...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTTTGCTGAAGTTGACTTaGATGAGGCTGGTGAATGGG +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCLLKLT*MRLVNG
Trigger: CCCATTCACCAGCCTCATCCAAGTCAACTTCAGCAA...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTATCTCCCGCATCTCCTaGATGTACTCCATCACATTT +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKAISRIS*MYSITF
Trigger: AAATGTGATGGAGTACATCCAGGAGATGCGGGAGAT...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCAATCTCCCGCATCTCCTaGATGTACTCCATCACATTT +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAISRIS*MYSITF
Trigger: AAATGTGATGGAGTACATCCAGGAGATGCGGGAGAT...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTTTGCTTGGCTTTCTaGATCCGGTTCTGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVFCLAF*IRFCRL
Trigger: CAACCTGCAGAACCGGATCCAGAAAGCCAAGCAAAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCTTCTACGTTTTGCTTaGCTTTCTGGATCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVLLRFA*LSGSGS
Trigger: AGAACCGGATCCAGAAAGCCAAGCAAAACGTAGAAG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTCTTCTACGTTTTGCTTaGCTTTCTGGATCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKALLRFA*LSGSGS
Trigger: AGAACCGGATCCAGAAAGCCAAGCAAAACGTAGAAG...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTGAGCCAGGGTAGGTaGTGTCTTGGGGATGGTGTC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLSQGR*CLGDGV
Trigger: GACACCATCCCCAAGACACCACCTACCCTGGCTCAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCAGCCATGGAAGACCTTaGTGTTCTCACAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLSHGRP*CSHSWT
Trigger: TGTCCAGCTGTGAGAACACCAAGGTCTTCCATGGCT...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTCTGCTTCACCTGAATaGCCAGTTTCTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSASPE*PVSWCW
Trigger: CCAACACCAAGAAACTGGCCATTCAGGTGAAGCAGA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATCAGCTGCTTGTAGTCTaGCACCGTGACCTCGAACAG +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHQLLVV*HRDLEQ
Trigger: CTGTTCGAGGTCACGGTGCCAGACTACAAGCAGCTG...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTCTGCAGCTGCACCTaGTTGTCCTCCAGCGTCTCC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKFCSCT*LSSSVS
Trigger: GGAGACGCTGGAGGACAACCAGGTGCAGCTGCAGAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGAGCGTCACAGATGTTaGCGAAGCAGTGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVERHRC*RSSASF
Trigger: AAAAGAAGCACTGCTTCGCCAACATCTGTGACGCTC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGCACCTATCTGTGAGTaGGGTGATGACCAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKAPICE*GDDQPR
Trigger: CCTCGGCTGGTCATCACCCCACTCACAGATAGGTGC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCAGTACCGGATGCGGATaGTTTCTGTGGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLSTGCG*FLWCGL
Trigger: TAGTCCACACCACAGAAACCATCCGCATCCGGTACT...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTTCAGAATCTCTGCTGTaGAGAATAAGATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVSESLL*RIRCPG
Trigger: TCCAGGGCATCTTATTCTCCACAGCAGAGATTCTGA...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCAGGGCCTGCCTCTTaGGCGCCACGTCGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPGPAS*APRRSR
Trigger: TCTACTGCGACGTGGCGCCCAAGAGGCAGGCCCTGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCTGGTTGTTCCAGGTaGCCACGTCTGCGTCATCAG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPGCSR*PRLRHQ
Trigger: CTGATGACGCAGACGTGGCCACCTGGAACAACCAGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGATCCACTTGATGCCTTaGAGCTGGGCATCCACAATC +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTEIHLMP*SWASTI
Trigger: GATTGTGGATGCCCAGCTCCAAGGCATCAAGTGGAT...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGGATCAGGCGGAAACTaGGGTGGTACTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKGSGGN*GGTPPP
Trigger: AGGAGGTGGAGTACCACCCCAGTTTCCGCCTGATCC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTGATGAGCGTGCACTaGGCCTGCATCTCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLMSVH*ACISGL
Trigger: CAAGCCCGAGATGCAGGCCCAGTGCACGCTCATCAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTGTTCTTCCATTCTTTaGGGAAGATCTCTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPCSSIL*GRSLSR
Trigger: CCGAGAAAGAGATCTTCCCCAAAGAATGGAAGAACA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAAGGATGAAGAAGATTaGTGTGGAAGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVKDEED*CGRAAL
Trigger: GAGAGCAGCCCTTCCACACCAATCTTCTTCATCCTT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGCTTATAGTCCAGGTTTaGGGGGATCTGAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHELIVQV*GDLKPG
Trigger: CCCGGGTTTCAGATCCCCCCAAACCTGGACTATAAG...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCATAGAACAGAGCAGTaGACAAGTCTTCCATGTCGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVHRTEQ*TSLPCR
Trigger: CCGACATGGAAGACTTGTCCACTGCTCTGTTCTATG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGATTCATAGATGTTCTTaGTCTCCATTCGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPIHRCS*SPFGPQ
Trigger: CTGTGGACCGAATGGAGACCAAGAACATCTATGAAT...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGTGTAGTTGTCCTTGGTaGTGTTCTCCGGCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTECSCPW*CSPASS
Trigger: AGATGAAGCCGGAGAACATCACCAAGGACAACTACA...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACAGAGGTGGCCCAGATaGAGCAGATGGTGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKQRWPR*SRWCLA
Trigger: TGCTAAGCACCATCTGCTTCATCTGGGCCACCTCTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGTGGCTGCCCCAGGTTaGAGTGGCAGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFVAAPG*SGSPGP
Trigger: TGGACCAGGACTGCCACTTCAACCTGGGGCAGCCAC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTGGTTGTATCTGCTCTaGACAGTTCTGCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFWLYLL*TVLHFP
Trigger: TGGAAAATGCAGAACTGTTCAGAGCAGATACAACCA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTCGGTGTCAATATAGTTaGCATAATCCTTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFRCQYS*HNPSRT
Trigger: AGTCCTGGAAGGATTATGTCAACTATATTGACACCG...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTCGGTGTCAATATAGTTaGCATAATCCTTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: VERGCSLLCLRGVSVHACRCQYS*HNPSRT
Trigger: AGTCCTGGAAGGATTATGTCAACTATATTGACACCG...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCTTCTTCATAAATTCTTaGAGGTCATCCACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVFFINS*RSSTQR
Trigger: CCTTTGGGTGGATGACCTTCAAGAATTTATGAAGAA...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCTGAGTGGCCTGCATaGGCTGTTGCCAGTGGCGGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPEWPA*AVASGG
Trigger: ACCGCCACTGGCAACAGCTCATGCAGGCCACTCAGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGCACTTCGTCAGACTTaGGCATCATGGTGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKALRQT*ASWCLS
Trigger: GGACAGGCACCATGATGCTCAAGTCTGACGAAGTGC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACAAACCAGATGGAGATaGCCGAGTCTGCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKQTRWR*PSLRWT
Trigger: TGTCCACCGCAGACTCGGTCATCTCCATCTGGTTTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACGTCAAGGCGGAACTTaGGCTTACACAGGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRQGGT*AYTGCR
Trigger: TCGACAGCCTGTGTAAGCTCAAGTTCCGCCTTGACG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGCGCATTCAGCTGGCTaGTCTGCTTTTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLAHSAG*SAFCCS
Trigger: ACTACAACAAAAAGCAGATCAGCCAGCTGAATGCGC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCACCAGCACAGACTTaGTGGCCCGAAGGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPPAQT*WPEGPS
Trigger: ACTGGGGCCTTCGGGCCATCAAGTCTGTGCTGGTGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCGCCGATCAGCCCCATaGACACGGGCAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRRSAP*TRAGHQ
Trigger: CTGATGACCTGCCCGTGTTCATGGGGCTGATCGGCG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTGTCCTCAGGTGGCTaGTCTCAAACACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLSSGG*SQTPAS
Trigger: TGAGGCTGGTGTTTGAGATCAGCCACCTGAGGACAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCCACTCGATAATCAATaGGCTGATCCTGGAACATGG +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLPLDNQ*ADPGTW
Trigger: CCATGTTCCAGGATCAGCTCATTGATTATCGAGTGG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGCCGCATGGAGGAGATaGTGTTTTCAAGGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEAAWRR*CFQGLR
Trigger: ACGAAGACCTTGAAAACATCATCTCCTCCATGCGGC...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGGTTCTGATAGAGTTTaGTCTGCTCTAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCGSDRV*SALERS
Trigger: AGACCTTTCTAGAGCAGATCAAACTCTATCAGAACC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCTGGCTTTCTCCTTGCTaGCCTTCTCCGTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSWLSPC*PSPSPH
Trigger: GTGTGGAGACGGAGAAGGTCAGCAAGGAGAAAGCCA...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATAGAAGCGCACAATGTTaGTACACCAGGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHRSAQC*YTRSTG
Trigger: GCCTGTGCTCCTGGTGTATCAACATTGTGCGCTTCT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCCTCCTGCTGACACTTaGTTTTCTCAGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLPPADT*FSQLLL
Trigger: AAGCAACAGCTGAGAAAATCAAGTGTCAGCAGGAGG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTGGACCTTTAACTTATTaGTGTAAGGGATCCAGAACT +
Preference number: 4 (lower is better)
Translates to: DPTSCLREPSSWAPESQIGPLTY*CKGSRT
Trigger: AGTTCTGGATCCCTTACATCAATAAGTTAAAGGTCC...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATCTTGAGCCAAGAAGATaGGCTTGTCCCGCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHLEPRR*ACPARR
Trigger: TCTTCGAGCGGGACAAGCTCATCTTCTTGGCTCAAG...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCGGAACAGCTTCTCTaGGGTGACAGTCAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSEQLL*GDSQEA
Trigger: GGCTTCCTGACTGTCACCTCAGAGAAGCTGTTCCGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCATCCCTTCTACGTTTTaGTTGGCTTTCTGGATCCGG +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLIPSTF*LAFWIR
Trigger: CCGGATCCAGAAAGCCAAGCAAAACGTAGAAGGGAT...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCAGGTTGGCCACCCTaGCGTCCAGGTCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSGWPP*RPGPTG
Trigger: CCCTGTTGGACCTGGACGGCAGGGTGGCCAACCTGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATACTTGTAGTTCAATCTaGCCTTGGCCAGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHTCSSI*PWPGEG
Trigger: TCCCTCGCCTGGCCAAGGGCAGATTGAACTACAAGT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGTGTTGAGCAAGGTCTaGTTGAAGGGGCGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKVLSKV*LKGRQS
Trigger: TGACTGCCGCCCCTTCAAGCAGACCTTGCTCAACAC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCAGTCAATGTCCATCTaGTCCACATTGATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCQSMSI*STLMSF
Trigger: GAAGGACATCAATGTGGAGCAGATGGACATTGACTG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATCAAACTCGTCCTCCTTaGTGTACATCCCCAGCCCAA +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHQTRPP*CTSPAQ
Trigger: TTGGGCTGGGGATGTACAGCAAGGAGGACGAGTTTG...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGGCTCTGCTTCCCACTaGCACCCACGCCCACCAACA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFGSASH*HPRPPT
Trigger: TGTTGGTGGGCGTGGGTGGCAGTGGGAAGCAGAGCC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCTGGATCAGCTTGTCTaGATTCTCATTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVLDQLV*ILILLL
Trigger: AAGCAGAAGAATGAGAATGCAGACAAGCTGATCCAG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGTTGGCATTGAGTTCTaGAATCTTGTTTTTGATCCG +
Preference number: 4 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYVGIEF*NLVFDP
Trigger: CGGATCAAAAACAAGATTGCAGAACTCAATGCCAAC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCGTTGGCATTGAGTTCTaGAATCTTGTTTTTGATCCG +
Preference number: 4 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVVGIEF*NLVFDP
Trigger: CGGATCAAAAACAAGATTGCAGAACTCAATGCCAAC...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCCTCGAAGAGCCCGCGTaGCGTGTACATGTACACAGA +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSLEEPA*RVHVHR
Trigger: TCTGTGTACATGTACACGGCACGCGGGCTCTTCGAG...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTCGAAGAGCCCGCGTaGCGTGTACATGTACACAGA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLEEPA*RVHVHR
Trigger: TCTGTGTACATGTACACGGCACGCGGGCTCTTCGAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGCGGTCCGGCCTCATaGAGCGCACCATGCACAGCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCGPAS*SAPCTA
Trigger: AGCTGTGCATGGTGCGCTGCATGAGGCCGGACCGCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTCTTCAACGAACTTACTaGCCATCTTCTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKALQRTY*PSSLPQ
Trigger: TTGTGGAAGAGAAGATGGGCAGTAAGTTCGTTGAAG...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCTTCAACGAACTTACTaGCCATCTTCTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVLQRTY*PSSLPQ
Trigger: TTGTGGAAGAGAAGATGGGCAGTAAGTTCGTTGAAG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGGACTTGAGGGACTCTaGGAAGCCCAGGCAAGGAAT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKGLEGL*EAQARN
Trigger: ATTCCTTGCCTGGGCTTCCCAGAGTCCCTCAAGTCC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGCTATCTTGTTCACCTTaGGCCTGTTTAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTELSCSP*ACLAAR
Trigger: ACGAGCAGCTAAACAGGCCCAAGGTGAACAAGATAG...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGCCAGTAGCAGCTTTTaGCTTTTTCCAGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCASSSF*LFPGSQ
Trigger: TTGAGATCCTGGAAAAAGCCAAAAGCTGCTACTGGC...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGTTGCTGAAGTTGACTTaGATGAGGCTGGTGAATGGG +
Preference number: 4 (lower is better)
Translates to: SLAAGNQASLLCVALGTELLKLT*MRLVNG
Trigger: CCCATTCACCAGCCTCATCCAAGTCAACTTCAGCAA...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGATCTCCCGCATCTCCTaGATGTACTCCATCACATTT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVISRIS*MYSITF
Trigger: AAATGTGATGGAGTACATCCAGGAGATGCGGGAGAT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCTTCTACGTTTTGCTTaGCTTTCTGGATCCGGTTCT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLLRFA*LSGSGS
Trigger: AGAACCGGATCCAGAAAGCCAAGCAAAACGTAGAAG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCTCTGCTTCACCTGAATaGCCAGTTTCTTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLSASPE*PVSWCW
Trigger: CCAACACCAAGAAACTGGCCATTCAGGTGAAGCAGA...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGGCGGACCTCCCTGTaGCAGGCCTTCAGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRRTSL*QAFSCL
Trigger: CAAGCAGCTGAAGGCCTGCCACAGGGAGGTCCGCCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCGCTTCTGCTGCCAGCTaGTCACCTCCTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSASAAS*SPPSGS
Trigger: ACTTCCTGAAGGAGGTGACCAGCTGGCAGCAGAAGC...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGGATCCGGTTTGTTTGTaGCTTCCACCACGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVDPVCL*LPPRLV
Trigger: CACCAAACGTGGTGGAAGCCACAAACAAACCGGATC...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGGAACGCCAGCCTCTTaGTCTCCAGATATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHGTPAS*SPDIQP
Trigger: TGGCTGAATATCTGGAGACCAAGAGGCTGGCGTTCC...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAAGAGCTTGGACAGGTaGCGGCTCACCTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFKSLDR*RLTSTG
Trigger: CCCCGTGGAGGTGAGCCGCCACCTGTCCAAGCTCTT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGAGCAGCTCTTCCAGCTaGACGACTTTCAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVSSSSS*TTFSTK
Trigger: CTTTGTGCTGAAAGTCGTCCAGCTGGAAGAGCTGCT...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCATACCAGTGCCTGTaGTCCATGTGCTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSYQCL*SMCWRM
Trigger: CATCCGCCAGCACATGGACCACAGGCACTGGTATGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTTCAGAATCTCTGCTGTaGAGAATAAGATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCSESLL*RIRCPG
Trigger: TCCAGGGCATCTTATTCTCCACAGCAGAGATTCTGA...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCAAGTGGCAGAAGATGTTaGGTTTGGCAAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: QDAGSLAAGNQASLLCVASGRRC*VWQRDS
Trigger: AGAATCTCTTTGCCAAACCCAACATCTTCTGCCACT...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGTTCTTGAGTGTGATCTaGAAGACGTCCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEFLSVI*KTSRAL
Trigger: CAGTGCCCTGGACGTCTTCCAGATCACACTCAAGAA...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAACTCAGGGTCAAAGGTaGGGTTGCCTTGGTACGGCT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKTQGQR*GCLGTA
Trigger: AGCCGTACCAAGGCAACCCCACCTTTGACCCTGAGT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACACAGGGTAACGCCCTaGCTCTTGAAGTTCTCCACC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKHRVTP*LLKFST
Trigger: GGTGGAGAACTTCAAGAGCCAGGGCGTTACCCTGTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTTGTTCTTCCATTCTTTaGGGAAGATCTCTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKACSSIL*GRSLSR
Trigger: CCGAGAAAGAGATCTTCCCCAAAGAATGGAAGAACA...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCATGTTGAAGGTCTCTaGGATCTTCTCCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLHVEGL*DLLQDV
Trigger: GACATCCTGGAGAAGATCCCAGAGACCTTCAACATG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATAAGTCCAGACATAGGTaGGTCCTCGGATACGCGTCT +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHKSRHR*VLGYAS
Trigger: AGACGCGTATCCGAGGACCCACCTATGTCTGGACTT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGGAGAAGGCGAGGGATaGAGGGAATTCCCACGGCAC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFGEGEG*REFPRH
Trigger: GTGCCGTGGGAATTCCCTTCATCCCTCGCCTTCTCC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCTGTACCAGCCGACAATaGGCTCCAGGTTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSCTSRQ*APGCLQ
Trigger: TTGTAGGCAACCTGGAGCTCATTGTCGGCTGGTACA...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTACCAGCCGACAATaGGCTCCAGGTTGCCTACAA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKCTSRQ*APGCLQ
Trigger: TTGTAGGCAACCTGGAGCTCATTGTCGGCTGGTACA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGGTTGTATCTGCTCTaGACAGTTCTGCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVWLYLL*TVLHFP
Trigger: TGGAAAATGCAGAACTGTTCAGAGCAGATACAACCA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTTAGAGATTTGCGGATaGAGCGATCAAATTCATCTA +
Preference number: 4 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPLEICG*SDQIHL
Trigger: TAGATGAATTTGATCGCTTCATCCGCAAATCTCTAA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGGCCAGGCGAGGGATaGGCCTGGCCACATTGTAGA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFWPGEG*AWPHCR
Trigger: TCTACAATGTGGCCAGGCTCATCCCTCGCCTGGCCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCGTTGCTGGCCAGGGTaGGGACCTTGTTGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRCWPG*GPCCRP
Trigger: TGGACGACAACAAGGTCCTCACCCTGGCCAGCAACG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGCTCTGCAGCTTCATaGGGCCGTTCTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCSAAS*GRSPAA
Trigger: AGCGGCTGGAGAACGGCCTCATGAAGCTGCAGAGCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCTGCAATCTTGTTTTTaGTCCGGGACAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLLQSCF*SGTVSP
Trigger: AGGAGAAACTGTCCCGGATCAAAAACAAGATTGCAG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCCTTTAGCACAATCTTaGACTCATTCTGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVPLAQS*THSEIW
Trigger: CCAAATCTCAGAATGAGTTCAAGATTGTGCTAAAGG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACGAAGAGGATGCACTTaGACTCGATCTCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRRGCT*TRSPWC
Trigger: GCACCAAGGAGATCGAGTTCAAGTGCATCCTCTTCG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGTTCAGCCTGTGGACCTaGTTCACAATGTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEFSLWT*FTMSSD
Trigger: GTCAGAAGACATTGTGAAGCAGGTCCACAGGCTGAA...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAATGGTGAAGTCTGCCTaGTCCATCTCCTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKMVKSA*SISSNR
Trigger: CCTGTTGGAGGAGATGGAGCAGGCAGACTTCACCAT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCATGTACAGGAGCTTTaGGGAAGACTCCATACAGTT +
Preference number: 4 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLHVQEL*GRLHTV
Trigger: AACTGTATGGAGTCTTCCGCAAAGCTCCTGTACATG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTCATCCGGCAGCTTTaGAGCAACCCCATCATCTCG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKFIRQL*SNPIIS
Trigger: CGAGATGATGGGGTTGCTGCAAAGCTGCCGGATGAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCACTTGTAGTTCAATCTaGCCTTGGCCAGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSTCSSI*PWPGEG
Trigger: TCCCTCGCCTGGCCAAGGGCAGATTGAACTACAAGT...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTACAGGCTGGCAGACTTaGACAGCGCCTCCATCACGC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFTGWQT*TAPPSR
Trigger: GCGTGATGGAGGCGCTGTGCAAGTCTGCCAGCCTGT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCCTGCATGAGCTGTTaGCAGTGGCGGTCACGGATG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFACMSC*QWRSRM
Trigger: CATCCGTGACCGCCACTGGCAACAGCTCATGCAGGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCGACATCATCAGGTTCTaGAGCTGCACCTGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSDIIRF*SCTWLS
Trigger: GGACAACCAGGTGCAGCTGCAGAACCTGATGATGTC...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTTCTTGGCCCGAATTaGATCTTGGACACACTTTAC +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVFLGPN*ILDTLY
Trigger: GTAAAGTGTGTCCAAGATGCAATTCGGGCCAAGAAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTCAGGGTCAGTTTCTaGCGGTCATACCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKFRVSF*RSYQCL
Trigger: CAGGCACTGGTATGACCGGCAGAAACTGACCCTGAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGTTGCTTTTTCAAATaGCGAGGTAAGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVCCFFK*RGKVAQ
Trigger: CTGAGCAACCTTACCTCGGCATTTGAAAAAGCAACA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCACCATGCACAGCTTCTaGAGGGCGGTCTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSTMHSF*RAVLFF
Trigger: GAAGAACAAGACCGCCCTGCAGAAGCTGTGCATGGT...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCATGCAGCGCACCATaGACAGCTTCTGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSCSAP*TASAGR
Trigger: CCGCCCTGCAGAAGCTGTGCATGGTGCGCTGCATGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATCAGGATCCACTTGGCTaGCTTCTCTTTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHQDPLG*LLFGLQ
Trigger: CTGAAGACCAAAGAGAAGGCAGCCAAGTGGATCCTG...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCCTCTACCCACTGCTaGTATTTCTTCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPSTHC*YFFIRQ
Trigger: CTGCCGGATGAAGAAATACCAGCAGTGGGTAGAGGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTCTCAAAGGAGTCCTaGTACTCCTCAGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLSKES*YSSATF
Trigger: GAAGGTGGCTGAGGAGTACCAGGACTCCTTTGAGAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACACTGCAGCCAGCCATaGAAGACCTTGGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKHCSQP*KTLVFS
Trigger: TGAGAACACCAAGGTCTTCCATGGCTGGCTGCAGTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCGTCTCCCTCCTTAAGTaGCTTCTTCAGGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSVSLLK*LLQGCS
Trigger: CGAACAGCCCTGAAGAAGCCACTTAAGGAGGGAGAC...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAATGGCCAGTTTCTTaGTGTTGGTCCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHEWPVS*CWSTAL
Trigger: CAGAGCAGTGGACCAACACCAAGAAACTGGCCATTC...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGAGCGTCACAGATGTTaGCGAAGCAGTGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEERHRC*RSSASF
Trigger: AAAAGAAGCACTGCTTCGCCAACATCTGTGACGCTC...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGGGACTCAATCCACATaGGATCTATGTCCCCGTCCA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKGTQST*DLCPRP
Trigger: TGGACGGGGACATAGATCCCATGTGGATTGAGTCCC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCGGATGAGGGTGTGTaGGGCCACCGTGCCATACTT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFADEGV*GHRAIL
Trigger: AAGTATGGCACGGTGGCCCCACACACCCTCATCCGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCCACACCCACCACCTaGATCAGCTTGTCTGCATTC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSTPTT*ISLSAF
Trigger: GAATGCAGACAAGCTGATCCAGGTGGTGGGTGTGGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGTTCTTCCATTCTTTaGGGAAGATCTCTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVCSSIL*GRSLSR
Trigger: CCGAGAAAGAGATCTTCCCCAAAGAATGGAAGAACA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGAAGGATGAAGAAGATTaGTGTGGAAGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEKDEED*CGRAAL
Trigger: GAGAGCAGCCCTTCCACACCAATCTTCTTCATCCTT...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGATCGATTCCAGCCCTaGGCGCCAAACTTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFDRFQP*APNLRL
Trigger: GAGGCGCAAGTTTGGCGCCCAGGGCTGGAATCGATC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTTATAGTCCAGGTTTaGGGGGATCTGAAACCCGGG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLIVQV*GDLKPG
Trigger: CCCGGGTTTCAGATCCCCCCAAACCTGGACTATAAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGATTCATAGATGTTCTTaGTCTCCATTCGGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVIHRCS*SPFGPQ
Trigger: CTGTGGACCGAATGGAGACCAAGAACATCTATGAAT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
3UTR CAA 72 bp AGTTGGGAAGGCAGGCATGGGGATTACTGCAGGCTCTaGTTTATTCTTGAGCTCAGTGTAGATGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SWEGRHGDYCRL*FILELSVDAAV
Trigger: CACAGCAGCATCTACACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAATGGTCTGCACGCGGTaGAAGAAGGAATTCATTCGG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKMVCTR*KKEFIR
Trigger: CCGAATGAATTCCTTCTTTCACCGCGTGCAGACCAT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCTCCATGCTGGACATaGCCGGGTGCTCGATGTGTT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPPCWT*PGARCV
Trigger: AACACATCGAGCACCCGGTCATGTCCAGCATGGAGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGCCTTGGTACGGCTTaGAGGCCTTTAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCLGTA*RPLGRP
Trigger: AGGCCTGCCTAAAGGCCTTCAAGCCGTACCAAGGCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCGCATCTGCCTCCTGCTaGCACTTGATTTTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSASASC*HLIFSA
Trigger: AGCTGAGAAAATCAAGTGTCAGCAGGAGGCAGATGC...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGACGAAGGCCGAGATaGGCAGCACATCCCCACACA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRRRPR*AAHPHT
Trigger: TGTGTGGGGATGTGCTGCTCATCTCGGCCTTCGTCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAACCTGGAAGGTGACTTaGGCCAAGAAGATGAGCTTG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKTWKVT*AKKMSL
Trigger: CAAGCTCATCTTCTTGGCTCAAGTCACCTTCCAGGT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTTCTGGAATCTCTTTCTaGTGCTGGAAGTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: LGWGSAQGAELCFATLKASGISF*CWKFKY
Trigger: ATATTTGAACTTCCAGCAGCAGAAAGAGATTCCAGA...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTGACTTTCATCAGGTaGCCCATGACCTCTACCAGC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLTFIR*PMTSTS
Trigger: GCTGGTAGAGGTCATGGGGCACCTGATGAAAGTCAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTGGTGTTGGTCCACTaGTCTGGCAGCTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLVLVH*SGSSCS
Trigger: GCTGCAGGAGCTGCCAGAGCAGTGGACCAACACCAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACACAAAGCTGTCTTCTaGCTGAAGCTTGAGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKHKAVF*LKLELH
Trigger: GTGGAGCTCAAGCTTCAGGCAGAAGACAGCTTTGTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGCCTGTGGTCCATGTaGTGGCGGATGAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCLWSM*WRMRVC
Trigger: ACACACCCTCATCCGCCAGCACATGGACCACAGGCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGATTTCATTGGCTGTGTaGTTGGTGGTCTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEISLAV*LVVSRF
Trigger: AAACCTGGAGACCACCAAGCACACAGCCAATGAAAT...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACAGGATCCACTTGGCTaGCTTCTCTTTGGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKQDPLG*LLFGLQ
Trigger: CTGAAGACCAAAGAGAAGGCAGCCAAGTGGATCCTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGCCAGGTGAAGGCCTaGGAACTCTCCACCTTAGCG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCQVKA*ELSTLA
Trigger: CGCTAAGGTGGAGAGTTCGCAGGCCTTCACCTGGCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTGTTTAGCTGCTCGTaGATGCACTGCAGGTTCATG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLFSCS*MHCRFM
Trigger: CATGAACCTGCAGTGCATCCACGAGCAGCTAAACAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGGCTTGGCAGAAGATaGTGGCCAGCCTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRLGRR*WPASCP
Trigger: TGGACAGGAGGCTGGCCACCATCTTCTGCCAAGCCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGAATGGCCAGTTTCTTaGTGTTGGTCCACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKEWPVS*CWSTAL
Trigger: CAGAGCAGTGGACCAACACCAAGAAACTGGCCATTC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGGCTCCAGGTTCTTTaGACCTCAAACCAGATGGAG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKWLQVL*TSNQME
Trigger: CTCCATCTGGTTTGAGGTCCAAAGAACCTGGAGCCA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGGCCCGAATTGCATCTTaGACACACTTTACCTGTACA +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVARIAS*THFTCT
Trigger: TGTACAGGTAAAGTGTGTCCAAGATGCAATTCGGGC...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGCAGCTCTTCCAGCTaGACGACTTTCAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSSSSS*TTFSTK
Trigger: CTTTGTGCTGAAAGTCGTCCAGCTGGAAGAGCTGCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGTACCGGATGCGGATaGTTTCTGTGGTGTGGACTA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSTGCG*FLWCGL
Trigger: TAGTCCACACCACAGAAACCATCCGCATCCGGTACT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGTTGACCACAGCGTCTaGCGGGGATCCGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFVDHSV*RGSEGL
Trigger: AAGTCCTTCGGATCCCCGCCAGACGCTGTGGTCAAC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCTGGTTGTTCCAGGTaGCCACGTCTGCGTCATCAG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPGCSR*PRLRHQ
Trigger: CTGATGACGCAGACGTGGCCACCTGGAACAACCAGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCCCTCCCGATTCTTCTTaGTCACTTCCACAGACAGAC +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSPPDSS*SLPQTD
Trigger: GTCTGTCTGTGGAAGTGACCAAGAAGAATCGGGAGG...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
3UTR CAA 72 bp AATTCACTTTGTGTTATTACCAAGGATTGGAACAAGTaGCCTGGAGCCTGCTGGCTGTGCCACATGAGGGAG +
Preference number: 4 (lower is better)
Translates to: NSLCVITKDWNK*PGACWLCHMRE
Trigger: CTCCCTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACACAAAGTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCTTCAGCCCTTGGGTaGCATTCATGTAGACGTTTT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPSALG*HSCRRF
Trigger: AAAACGTCTACATGAATGTCACCCAAGGGCTGAAGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGTGGTTGTATCTGCTCTaGACAGTTCTGCATTTTCCA +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVWLYLL*TVLHFP
Trigger: TGGAAAATGCAGAACTGTTCAGAGCAGATACAACCA...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTAGAGATTTGCGGATaGAGCGATCAAATTCATCTA +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLEICG*SDQIHL
Trigger: TAGATGAATTTGATCGCTTCATCCGCAAATCTCTAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAATTTCAAACTTCACCTaGGTGGCCTGCATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKISNFT*VACMSC
Trigger: ACAGCTCATGCAGGCCACTCAGGTGAAGTTTGAAAT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTCCTTCAGGAAGTGTaGCAGGTACTTGGACATCAT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLLQEV*QVLGHH
Trigger: ATGATGTCCAAGTACCTGTCACACTTCCTGAAGGAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGTCTTCTGAGCCGATaGAGATGCTCTCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCLLSR*RCSPGG
Trigger: GCCACCTGGAGAGCATCTTCATCGGCTCAGAAGACA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCGTCAAGGCGGAACTTaGGCTTACACAGGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRQGGT*AYTGCR
Trigger: TCGACAGCCTGTGTAAGCTCAAGTTCCGCCTTGACG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGCGCATTCAGCTGGCTaGTCTGCTTTTTGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKAHSAG*SAFCCS
Trigger: ACTACAACAAAAAGCAGATCAGCCAGCTGAATGCGC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGGTCGTGTAGAAGTTaGAAGGCACGGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRSCRS*KARPAP
Trigger: TGGTGCAGGCCGTGCCTTTCAACTTCTACACGACCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCTTGGACATCTCGTTaGCGGTGGTGTGCACGTAGG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSWTSR*RWCARR
Trigger: CCTACGTGCACACCACCGTCAACGAGATGTCCAAGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCTCCTGCTGACACTTaGTTTTCTCAGCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPPADT*FSQLLL
Trigger: AAGCAACAGCTGAGAAAATCAAGTGTCAGCAGGAGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTCTGGAATCTCTTTCTaGTGCTGGAAGTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSGISF*CWKFKY
Trigger: ATATTTGAACTTCCAGCAGCAGAAAGAGATTCCAGA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGTTCTCTCTGAATTCGTaGTGCTTGAGCTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVFSLNS*CLSSNC
Trigger: ACAGTTTGAGCTCAAGCAGCACGAATTCAGAGAGAA...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTATCAGGTTCTGCAGCTaGACCTGGTTGTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFIRFCS*TWLSSS
Trigger: GCTGGAGGACAACCAGGTGCAGCTGCAGAACCTGAT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCTCTGACTGCACCTTaGGCCTCTCAATCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSLTAP*ASQSSC
Trigger: GCAGCTGGATTGAGAGGCGCAAGGTGCAGTCAGAGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCCAGCGCTCTGTGTTaGACAGGATGGTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFASALC*TGWWHS
Trigger: AGAATGCCACCATCCTGTGCAACACAGAGCGCTGGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGGTAGTCCTCATGGCTaGCCGAGCTGTAGCGTTCTA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFGSPHG*PSCSVL
Trigger: TAGAACGCTACAGCTCGGGCAGCCATGAGGACTACC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTATCTTGTTCACCTTaGGCCTGTTTAGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLSCSP*ACLAAR
Trigger: ACGAGCAGCTAAACAGGCCCAAGGTGAACAAGATAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGTTTCAGGTACTTCATaGACACCTCAAGCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKVSGTS*TPQASP
Trigger: AGGAGAGGCTTGAGGTGTCCATGAAGTACCTGAAAC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTGAAGTGGCAGTCCTaGTCCACACCCTCTACCCAC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLKWQS*STPSTH
Trigger: GTGGGTAGAGGGTGTGGACCAGGACTGCCACTTCAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTGCTGAAGTTGACTTaGATGAGGCTGGTGAATGGG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLLKLT*MRLVNG
Trigger: CCCATTCACCAGCCTCATCCAAGTCAACTTCAGCAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGAAGACCTCACGTCCTTaGCAAACTTCTTACAGTCAA +
Preference number: 4 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEKTSRP*QTSYSQ
Trigger: TTGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTT...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCGTCCTCATACTTGTaGAGGTTCAGCTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSSSYL*RFSCSR
Trigger: TCTGCTACAGCTGAACCTCCACAAGTATGAGGACGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACGGGGTCGTTTCCGTTaGAGAGAATATCAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRGRFR*REYQAD
Trigger: ATCTGCTTGATATTCTCTCCAACGGAAACGACCCCG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGTGGCTGTCCTCAGGTaGCTGATCTCAAACACCAGC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFVAVLR*LISNTS
Trigger: GCTGGTGTTTGAGATCAGCCACCTGAGGACAGCCAC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCTGGCGCCGTCTTCTaGATGGCTTTCTCAAACACC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFAGAVF*MAFSNT
Trigger: GGTGTTTGAGAAAGCCATCCAGAAGACGGCGCCAGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCAGCACGCAGGGACGTaGTCATGTTTTTCACGGTGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFQHAGT*SCFSRC
Trigger: ACACCGTGAAAAACATGATCACGTCCCTGCGTGCTG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGGCTCTGATGTCTTCTaGGCCGATGAAGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFGSDVF*ADEDAL
Trigger: GAGAGCATCTTCATCGGCTCAGAAGACATCAGAGCC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCTTCTGCCTGAAGCTTaGGCTCCACGATGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLLPEA*APRCSV
Trigger: AACAGAGCATCGTGGAGCTCAAGCTTCAGGCAGAAG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGAAGCGCACAATGTTaGTACACCAGGAGCACAGGC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRSAQC*YTRSTG
Trigger: GCCTGTGCTCCTGGTGTATCAACATTGTGCGCTTCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCAGCGTACATTTTCTaGAGCCAGTCCTCCCACAAG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPAYIF*SQSSHK
Trigger: CTTGTGGGAGGACTGGCTTCAGAAAATGTACGCTGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTACACAGAGTAGGTaGTCTCGTCCGTCAGATTTA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKCTQSR*SRPSDL
Trigger: TAAATCTGACGGACGAGATCACCTACTCTGTGTACA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCCGCATCTCATTGGTaGGGATGTTCATCCTCTCAC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFAASHW*GCSSSH
Trigger: GTGAGAGGATGAACATCCTCACCAATGAGATGCGGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGAAAGGACTGTGGGTTaGAGAAGCCAGCTAGCCACA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFERTVG*RSQLAT
Trigger: TGTGGCTAGCTGGCTTCTTCAACCCACAGTCCTTTC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCAGGTATAAGACGATaGCATTTGCTTCCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSGIRR*HLLPSA
Trigger: GGCTGAAGGAAGCAAATGGCATCGTCTTATACCTGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGAACAATGTGGTCTCTaGGCTCAGCAGCTTCACGTC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFEQCGL*AQQLHV
Trigger: GACGTGAAGCTGCTGAGCGCAGAGACCACATTGTTC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCTATCGGTGGCCACCTaGCTCTCCTTGACTTTCATC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLSVAT*LSLTFI
Trigger: GATGAAAGTCAAGGAGAGGCAGGTGGCCACCGATAG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGACATCATCAGGTTCTaGAGCTGCACCTGGTTGTCC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFDIIRF*SCTWLS
Trigger: GGACAACCAGGTGCAGCTGCAGAACCTGATGATGTC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCACCTCAGGCTCAATaGCCTCTGTTTCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSPQAQ*PLFPPG
Trigger: TCCTGGAGGAAACAGAGGGCATTGAGCCTGAGGTGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATAGATTTGGTGAGGTTTaGCTTGAGTTGTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHRFGEV*LELFQI
Trigger: GATCTGGAACAACTCAAGGCAAACCTCACCAAATCT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAATTTCATTGGCTGTGTaGTTGGTGGTCTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKISLAV*LVVSRF
Trigger: AAACCTGGAGACCACCAAGCACACAGCCAATGAAAT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGAAAAGCTTCATGTTaGCACAGCAGAAGTCGTAGG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRKASC*HSRSRR
Trigger: CCTACGACTTCTGCTGTGCCAACATGAAGCTTTTCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCGCTTCAGAAACTCAATaGCCGTCTTGTAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSASETQ*PSCKGP
Trigger: AGGACCTTTACAAGACGGCCATTGAGTTTCTGAAGC...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCTTCTCCGCGCTCTCTaGAATCTCTTTCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLLRAL*NLFLLL
Trigger: CAGCAGCAGAAAGAGATTCCAGAGAGCGCGGAGAAG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCACTCCTGCATGGCCTaGGTGATCCCTTCTACGTTT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFHSCMA*VIPSTF
Trigger: AAACGTAGAAGGGATCACCCAGGCCATGCAGGAGTG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGTCCTTCCACTTGGTaGTCTTCCAGTCGTCGATGC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCPSTW*SSSRRC
Trigger: GCATCGACGACTGGAAGACCACCAAGTGGAAGGACA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGTGTGACAGGTACTTaGACATCATCAGGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSVTGT*TSSGSA
Trigger: TGCAGAACCTGATGATGTCCAAGTACCTGTCACACT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGGAACGCCAGCCTCTTaGTCTCCAGATATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFGTPAS*SPDIQP
Trigger: TGGCTGAATATCTGGAGACCAAGAGGCTGGCGTTCC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGTCACCACGGCTTCTaGAATTTCGTGGCGCAACGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSHHGF*NFVAQR
Trigger: ACGTTGCGCCACGAAATTCCAGAAGCCGTGGTGACT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGCGGATGGTTTCTGTaGTGTGGACTAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCGWFL*CGLERP
Trigger: AGGCCTCTCTAGTCCACACCACAGAAACCATCCGCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCAGAATCTCTGCTGTaGAGAATAAGATGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSESLL*RIRCPG
Trigger: TCCAGGGCATCTTATTCTCCACAGCAGAGATTCTGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCTTCTGGCCACTCGTaGAACCAGTTGATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSSGHS*NQLMAV
Trigger: CACAGCCATCAACTGGTTCCACGAGTGGCCAGAAGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCGCCGTCTTCTGGATaGCTTTCTCAAACACCACGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFAPSSG*LSQTPR
Trigger: ACGTGGTGTTTGAGAAAGCCATCCAGAAGACGGCGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCTTTTTCCACCTCTTaGCCGAGCCCTCAATGTCAC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFAFSTS*PSPQCH
Trigger: GTGACATTGAGGGCTCGGCCAAGAGGTGGAAAAAGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAAGTCCAGACATAGGTaGGTCCTCGGATACGCGTCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFKSRHR*VLGYAS
Trigger: AGACGCGTATCCGAGGACCCACCTATGTCTGGACTT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCATCACGCCCTCCATaGCCGAGATGCTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPSRPP*PRCSFV
Trigger: AACAAAAGAGCATCTCGGCCATGGAGGGCGTGATGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACGGTGTCAATATAGTTaGCATAATCCTTCCAGGACT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRCQYS*HNPSRT
Trigger: AGTCCTGGAAGGATTATGTCAACTATATTGACACCG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTACTCCAGGATACGGTTaGTCTTGCAGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFTPGYG*SCRCEP
Trigger: TGGCTCACATCTGCAAGATCAACCGTATCCTGGAGT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCCGCATGGAGGAGATaGTGTTTTCAAGGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFAAWRR*CFQGLR
Trigger: ACGAAGACCTTGAAAACATCATCTCCTCCATGCGGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCTTGTAGTGCGGGTTaGAGTACTTGGTGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFACSAG*STWCVG
Trigger: TCCTACACACCAAGTACTTCAACCCGCACTACAAGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTGACTTTCATCAGGTaGCCCATGACCTCTACCAGC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLTFIR*PMTSTS
Trigger: GCTGGTAGAGGTCATGGGGCACCTGATGAAAGTCAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTTCTTGGCCCGAATTaGATCTTGGACACACTTTAC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKFLGPN*ILDTLY
Trigger: GTAAAGTGTGTCCAAGATGCAATTCGGGCCAAGAAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTACACCAGCCTCATGGTaGGATTCAAGGGAATTCGCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFTPASW*DSREFA
Trigger: AGCGAATTCCCTTGAATCGCACCATGAGGCTGGTGT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTGGATCAGCTTGTCTaGATTCTCATTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLDQLV*ILILLL
Trigger: AAGCAGAAGAATGAGAATGCAGACAAGCTGATCCAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTTGCTTTTTCAAATaGCGAGGTAAGGTTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKCCFFK*RGKVAQ
Trigger: CTGAGCAACCTTACCTCGGCATTTGAAAAAGCAACA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGATTTGGTGAGGTTTaGCTTGAGTTGTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRFGEV*LELFQI
Trigger: GATCTGGAACAACTCAAGGCAAACCTCACCAAATCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTTCAACGAACTTACTaGCCATCTTCTCTTCCACAA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLQRTY*PSSLPQ
Trigger: TTGTGGAAGAGAAGATGGGCAGTAAGTTCGTTGAAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCTGTCTCTTTGGGCTaGATTTCTAGGACGGTTCGG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSVSLG*ISRTVR
Trigger: CCGAACCGTCCTAGAAATGCAGCCCAAAGAGACAGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGGTGTTCTCACAGCTaGACACCTCCTCATACAGCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFWCSHS*TPPHTA
Trigger: AGCTGTATGAGGAGGTGTCCAGCTGTGAGAACACCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGCCATGGAAGACCTTaGTGTTCTCACAGCTGGACA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSHGRP*CSHSWT
Trigger: TGTCCAGCTGTGAGAACACCAAGGTCTTCCATGGCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAAGACCTCACGTCCTTaGCAAACTTCTTACAGTCAA +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKKTSRP*QTSYSQ
Trigger: TTGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGATCCGGTTTGTTTGTaGCTTCCACCACGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFDPVCL*LPPRLV
Trigger: CACCAAACGTGGTGGAAGCCACAAACAAACCGGATC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGACAAAATAGAACCGTaGGAACGCCAGCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFDKIEP*ERQPLG
Trigger: ACCAAGAGGCTGGCGTTCCCACGGTTCTATTTTGTC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCAGTGGCAGAAGATGTTaGGTTTGGCAAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: CNFEGLETQKVISCPTGSSGRRC*VWQRDS
Trigger: AGAATCTCTTTGCCAAACCCAACATCTTCTGCCACT...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGTGGCAGAAGATGTTaGGTTTGGCAAAGAGATTCT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSGRRC*VWQRDS
Trigger: AGAATCTCTTTGCCAAACCCAACATCTTCTGCCACT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAATTCCTTGCGTAAAGTaGCAGAAGATGTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKIPCVK*QKMLGL
Trigger: CAAACCCAACATCTTCTGCCACTTTACGCAAGGAAT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTACCAAAGCGTCTTCTaGCCACTCGTGGAACCAGTT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFYQSVF*PLVEPV
Trigger: AACTGGTTCCACGAGTGGCCAGAAGACGCTTTGGTA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCTCTAGAAAGGTCTTaGGCGTGGTGTAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFALERS*AWCSCS
Trigger: GCTACAACTACACCACGCCCAAGACCTTTCTAGAGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTATCCACTTGATGCCTTaGAGCTGGGCATCCACAATC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFIHLMP*SWASTI
Trigger: GATTGTGGATGCCCAGCTCCAAGGCATCAAGTGGAT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCCAGGGACACGTTGTaGAGTTTCCCATTGTCTATG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPRDTL*SFPLSM
Trigger: CATAGACAATGGGAAACTCCACAACGTGTCCCTGGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCTCCCGATTCTTCTTaGTCACTTCCACAGACAGAC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPPDSS*SLPQTD
Trigger: GTCTGTCTGTGGAAGTGACCAAGAAGAATCGGGAGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCACTCGATAATCAATaGGCTGATCCTGGAACATGG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPLDNQ*ADPGTW
Trigger: CCATGTTCCAGGATCAGCTCATTGATTATCGAGTGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCTTTAGCACAATCTTaGACTCATTCTGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPLAQS*THSEIW
Trigger: CCAAATCTCAGAATGAGTTCAAGATTGTGCTAAAGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCACTGTCCAAGTTCTTaGACTCATCCATCTCCGACA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFHCPSS*THPSPT
Trigger: TGTCGGAGATGGATGAGTTCAAGAACTTGGACAGTG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCTTTATCCAGCTCCATaGGGATCTCAAATAGGGGAG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLYPAP*GSQIGE
Trigger: CTCCCCTATTTGAGATCCGCATGGAGCTGGATAAAG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGCAGTTCGATGGTTTaGTTCAGGGGCTCAAACATG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSSSMV*FRGSNM
Trigger: CATGTTTGAGCCCCTGAAGCAAACCATCGAACTGCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGAATCACCTTGAGCTaGCTGCGTACTTTCTCGATG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRITLS*LRTFSM
Trigger: CATCGAGAAAGTACGCAGGCAGCTCAAGGTGATTCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGTTGGCATTGAGTTCTaGAATCTTGTTTTTGATCCG +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKVGIEF*NLVFDP
Trigger: CGGATCAAAAACAAGATTGCAGAACTCAATGCCAAC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCAAACACCAGCCTCATaGTGCGATTCAAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFQTPAS*CDSREF
Trigger: GAATTCCCTTGAATCGCACCATGAGGCTGGTGTTTG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAAGGATGAAGAAGATTaGTGTGGAAGGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFKDEED*CGRAAL
Trigger: GAGAGCAGCCCTTCCACACCAATCTTCTTCATCCTT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCATGTTGAAGGTCTCTaGGATCTTCTCCAGGATGTC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFHVEGL*DLLQDV
Trigger: GACATCCTGGAGAAGATCCCAGAGACCTTCAACATG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCTGCAATCTTGTTTTTaGTCCGGGACAGTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLQSCF*SGTVSP
Trigger: AGGAGAAACTGTCCCGGATCAAAAACAAGATTGCAG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCATGTACAGGAGCTTTaGGGAAGACTCCATACAGTT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFHVQEL*GRLHTV
Trigger: AACTGTATGGAGTCTTCCGCAAAGCTCCTGTACATG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCTGGAATCTCTTTCTaGTGCTGGAAGTTCAAATAT +
Preference number: 4 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSGISF*CWKFKY
Trigger: ATATTTGAACTTCCAGCAGCAGAAAGAGATTCCAGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCAGTCAATGTCCATCTaGTCCACATTGATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFQSMSI*STLMSF
Trigger: GAAGGACATCAATGTGGAGCAGATGGACATTGACTG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCTCCATGGCCGAGATaGTCTTTTGTTGCTTATTCA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPPWPR*SFVAYS
Trigger: TGAATAAGCAACAAAAGAGCATCTCGGCCATGGAGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCCAGTAGCAGCTTTTaGCTTTTTCCAGGATCTCAA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFASSSF*LFPGSQ
Trigger: TTGAGATCCTGGAAAAAGCCAAAAGCTGCTACTGGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCTTCAGAAACTCAATaGCCGTCTTGTAAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFASETQ*PSCKGP
Trigger: AGGACCTTTACAAGACGGCCATTGAGTTTCTGAAGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCCCGAATTGCATCTTaGACACACTTTACCTGTACA +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFARIAS*THFTCT
Trigger: TGTACAGGTAAAGTGTGTCCAAGATGCAATTCGGGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGTAGTAGTCAAAAATaGTCCCCTGCGAGGGTAACT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCSSQK*SPARVT
Trigger: AGTTACCCTCGCAGGGGACCATTTTTGACTACTACA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCTCCTCAATTTCATTaGCTGTGTGCTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSPQFH*LCAWWS
Trigger: AGACCACCAAGCACACAGCCAATGAAATTGAGGAGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
3UTR CAA 72 bp GAATCCAGCACTTTGTTCCAGATACCTGCAGGTAGCTaGGCCTTTGGAAAGTTTGGAGATAATTTTGTCAAC +
Preference number: 4 (lower is better)
Translates to: ESSTLFQIPAGS*AFGKFGDNFVN
Trigger: GTTGACAAAATTATCTCCAAACTTTCCAAAGGCCAAGCTACCTGCAGGTATCTGGAACAAAGTGCTGGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGGTTCTGATAGAGTTTaGTCTGCTCTAGAAAGGTCT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFGSDRV*SALERS
Trigger: AGACCTTTCTAGAGCAGATCAAACTCTATCAGAACC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTCTCTCTGAATTCGTaGTGCTTGAGCTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFFSLNS*CLSSNC
Trigger: ACAGTTTGAGCTCAAGCAGCACGAATTCAGAGAGAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCTGGATCAGCTTGTCTaGATTCTCATTCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLDQLV*ILILLL
Trigger: AAGCAGAAGAATGAGAATGCAGACAAGCTGATCCAG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR GCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGATTTGGTGAGGTTTaGCTTGAGTTGTTCCAGATC +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRFGEV*LELFQI
Trigger: GATCTGGAACAACTCAAGGCAAACCTCACCAAATCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTCTTCATAAATTCTTaGAGGTCATCCACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFFFINS*RSSTQR
Trigger: CCTTTGGGTGGATGACCTTCAAGAATTTATGAAGAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR TCA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGGACCTTTAACTTATTaGTGTAAGGGATCCAGAACT +
Preference number: 4 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFGPLTY*CKGSRT
Trigger: AGTTCTGGATCCCTTACATCAATAAGTTAAAGGTCC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCATCTCCGACAGGGCCTaGATCCCGCCCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTISDRA*IPPQLW
Trigger: CCAGAGCTGGGGCGGGATCAAGGCCCTGTCGGAGAT...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTTGTCCTTGGGGATCTaGCCCCCAGGCGCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTLSLGI*PPGAVR
Trigger: CCTGACAGCGCCTGGGGGCAAGATCCCCAAGGACAA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS GCA 90 bp TCCTCGTCCCAGCGGTGTCGAAGCTGCGACTGCCAGGTGAAGGCCTaGGAACTCTCCACGGTGATCATCTTGGCCACCACGTCTCGGGCG +
Preference number: 5 (lower is better)
Translates to: SSSQRCRSCDCQVKA*ELSTVIILATTSRA
Trigger: CGCCCGAGACGTGGTGGCCAAGATGATCACCGTGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTGGGACGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCGCCACCTGCCTCTCCTaGACTTTCATCAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTATCLS*TFIRCP
Trigger: GGGGCACCTGATGAAAGTCAAGGAGAGGCAGGTGGC...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGTTGAGGACCTGCGATTaGCCGCTGCCCGCGTTCCCA +
Preference number: 5 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRLRTCD*PLPAFP
Trigger: TGGGAACGCGGGCAGCGGCAAATCGCAGGTCCTCAA...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTAGGGCCTCCACGTCTTaGAGGGGGTCAACCCCGGGG +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCRASTS*RGSTPG
Trigger: CCCCGGGGTTGACCCCCTCAAAGACGTGGAGGCCCT...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS TCA 90 bp GGACCTCCCTGTGGCAGGCCTTCAGCTGCTTGTAGTCTGGCACCGTaGCCTCGAACAGGCTGGCAGACTTGCACAGCGCCTCCATCACGC +
Preference number: 5 (lower is better)
Translates to: GPPCGRPSAACSLAP*PRTGWQTCTAPPSR
Trigger: GCGTGATGGAGGCGCTGTGCAAGTCTGCCAGCCTGTTCGAGGTCACGGTGCCAGACTACAAGCAGCTGAAGGCCTGCCACAGGGAGGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTAGCTCGTACAGCTCCTaGGGGGAGTCGGGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: LGWGSAQGAELCFATLKASSYSS*GESGGA
Trigger: CGCCCCGCCCGACTCCCCCAAGGAGCTGTACGAGCT...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCTCAGCCAGCTCGGCGTaGGCTTCCTCCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVSASSA*ASSRAC
Trigger: GCAGGCCCTGGAGGAAGCCAACGCCGAGCTGGCTGA...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS GCA 90 bp GGATTCAAGCTCCCTGATACGTTGCAGCAGATCGGCATACCAAGCTaGCAGGCCCATCATGGAGGGGTAGGCCCGGGCCACCCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: GFKLPDTLQQIGIPS*QAHHGGVGPGHPGV
Trigger: GACACCTGGGTGGCCCGGGCCTACCCCTCCATGATGGGCCTGGCAGCTTGGTATGCCGATCTGCTGCAACGTATCAGGGAGCTTGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp TGGTGCAAGGCCAGGGCTGCAGTCACCAGGTGGCTGCTCAGCCGCTaGATCACCAGAGGGGCTGAACGAAACGACAAGTGTTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: WCKARAAVTRWLLSR*ITRGAERNDKCCAR
Trigger: CCTGGCACAACACTTGTCGTTTCGTTCAGCCCCTCTGGTGATCCAGCGGCTGAGCAGCCACCTGGTGACTGCAGCCCTGGCCTTGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp GTCGCTGAGACTTTCTGGTGCAAGGCCAGGGCTGCAGTCACCAGGTaGCTGCTCAGCCGCTGGATCACCAGAGGGGCTGAACGAAACGAC +
Preference number: 5 (lower is better)
Translates to: VAETFWCKARAAVTR*LLSRWITRGAERND
Trigger: GTCGTTTCGTTCAGCCCCTCTGGTGATCCAGCGGCTGAGCAGCCACCTGGTGACTGCAGCCCTGGCCTTGCACCAGAAAGTCTCAGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAAGCTCCAGGCTCCACTaGAGCTGCCCAGACACGGGA +
Preference number: 5 (lower is better)
Translates to: LWHFVCCTLTPPPACASQSSRLH*SCPDTG
Trigger: TCCCGTGTCTGGGCAGCTCAAGTGGAGCCTGGAGCT...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGTACCGCTTGTTCAGGTaGGCCACCCTGCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWYRLFR*ATLPSR
Trigger: CCTGGACGGCAGGGTGGCCAACCTGAACAAGCGGTA...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAATGCAGCTGCACCTGGTaGTCCTCCAGCGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: LWHFVCCTLTPPPACASQCSCTW*SSSVST
Trigger: GGTGGAGACGCTGGAGGACAACCAGGTGCAGCTGCA...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGGACCGAGTGTCGGACTaGAAGCAGCTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRDRVSD*KQLFQL
Trigger: CAGCTGGAAGAGCTGCTTCAAGTCCGACACTCGGTC...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGGCCAGGGTGAGGACCTaGTTGTCGTCCATGACTGTG +
Preference number: 5 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRARVRT*LSSMTV
Trigger: CACAGTCATGGACGACAACAAGGTCCTCACCCTGGC...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCAAGCCGATGCGCAGCTaGTCCAGGCACGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVKPMRS*SRHVGR
Trigger: CCTGCCCACGTGCCTGGACAAGCTGCGCATCGGCTT...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGGCCACCGTGCCATACTaGTCCACCTCTGGCATGTTC +
Preference number: 5 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRATVPY*STSGMF
Trigger: GAACATGCCAGAGGTGGACAAGTATGGCACGGTGGC...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCTCAGCCAGCTCGGCGTaGGCTTCCTCCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFSASSA*ASSRAC
Trigger: GCAGGCCCTGGAGGAAGCCAACGCCGAGCTGGCTGA...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTGCGGGTTGAAGTACTaGGTGTGTAGGATCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTCGLKY*VCRIRR
Trigger: CCGCCTGATCCTACACACCAAGTACTTCAACCCGCA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGAGATCCGGACGCTCTTaGGCCACCACAGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPRSGRS*ATTAAR
Trigger: CCTGGCCGCTGTGGTGGCCAAAGAGCGTCCGGATCT...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTAAGCCGATCTCTGCGTaGGGGTGCAGGCCGTACAGG +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCKPISA*GCRPYR
Trigger: CCTGTACGGCCTGCACCCCAACGCAGAGATCGGCTT...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS TCA 90 bp TCACCTTGGGCCTGTTTAGCTGCTCGTGGATGCACTGCAGGTTCATaGGCCGGGCGTCCCAGAACTCAAATTCCACCCGGGGCAGGGGGT +
Preference number: 5 (lower is better)
Translates to: SPWACLAARGCTAGS*AGRPRTQIPPGAGG
Trigger: ACCCCCTGCCCCGGGTGGAATTTGAGTTCTGGGACGCCCGGCTCATGAACCTGCAGTGCATCCACGAGCAGCTAAACAGGCCCAAGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp GTTTCTGCCGGTCATACCAGTGCCTGTGGTCCATGTGCTGGCGGATaGGGGTGTGTGGGGCCACCGTGCCATACTTGTCCACCTCTGGCA +
Preference number: 5 (lower is better)
Translates to: VSAGHTSACGPCAGG*GCVGPPCHTCPPLA
Trigger: TGCCAGAGGTGGACAAGTATGGCACGGTGGCCCCACACACCCTCATCCGCCAGCACATGGACCACAGGCACTGGTATGACCGGCAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp TGGCCTTTAGGTCGTCCACCTGAGAGGCCGTGCTCTGCAGCTTCATaGGGCCGTTCTCCAGCCGCTCAATCTTGGCGACCAGCTCCATCC +
Preference number: 5 (lower is better)
Translates to: WPLGRPPERPCSAAS*GRSPAAQSWRPAPS
Trigger: GGATGGAGCTGGTCGCCAAGATTGAGCGGCTGGAGAACGGCCTCATGAAGCTGCAGAGCACGGCCTCTCAGGTGGACGACCTAAAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp GCCTGCATGAGCTGTTGCCAGTGGCGGTCACGGATGGCGGGGTTCTaGAGCTCGCTCACAGCACGCAGGGACGTGATCATGTTTTTCACG +
Preference number: 5 (lower is better)
Translates to: ACMSCCQWRSRMAGF*SSLTARRDVIMFFT
Trigger: CGTGAAAAACATGATCACGTCCCTGCGTGCTGTGAGCGAGCTGCAGAACCCCGCCATCCGTGACCGCCACTGGCAACAGCTCATGCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp CAGTTGTGCACGTCCTTCAGGGTCAGTTTCTGCCGGTCATACCAGTaGCTGTGGTCCATGTGCTGGCGGATGAGGGTGTGTGGGGCCACC +
Preference number: 5 (lower is better)
Translates to: QLCTSFRVSFCRSYQ*LWSMCWRMRVCGAT
Trigger: GGTGGCCCCACACACCCTCATCCGCCAGCACATGGACCACAGGCACTGGTATGACCGGCAGAAACTGACCCTGAAGGACGTGCACAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp TCTTCTCCAGGATGTCATCCAGCACAGCCTTCACCTGGAAACCAGTaGCGGGCAAGCCGATTGTGCCCAGGCTACCCTCTGAGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: SSPGCHPAQPSPGNQ*RASRLCPGYPLSPG
Trigger: GCCTGGGCTCAGAGGGTAGCCTGGGCACAATCGGCTTGCCCGGCACTGGTTTCCAGGTGAAGGCTGTGCTGGATGACATCCTGGAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106308.10
CDS GCA 90 bp TCCTCGTCCCAGCGGTGTCGAAGCTGCGACTGCCAGGTGAAGGCCTaGGAACTCTCCACCTTAGCGGTGATCATCTTGGCCACCACGTCT +
Preference number: 5 (lower is better)
Translates to: SSSQRCRSCDCQVKA*ELSTLAVIILATTS
Trigger: AGACGTGGTGGCCAAGATGATCACCGCTAAGGTGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTGGGACGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTACCGACAGGGAGATGTaGCCCAGGACCTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCTDREM*PRTSSI
Trigger: GATCGAGGAGGTCCTGGGCAACATCTCCCTGTCGGT...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCTACCGCTTGTTCAGGTaGGCCACCCTGCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVYRLFR*ATLPSR
Trigger: CCTGGACGGCAGGGTGGCCAACCTGAACAAGCGGTA...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTGGCTTCCACCACGTTaGGTGTCTTCACAGCATCCT +
Preference number: 5 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTWLPPR*VSSQHP
Trigger: AGGATGCTGTGAAGACACCAAACGTGGTGGAAGCCA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACAGGCTGTCGAAGAGCTaGGACAGGTGGCGGCTCACC +
Preference number: 5 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYRLSKS*DRWRLT
Trigger: GGTGAGCCGCCACCTGTCCAAGCTCTTCGACAGCCT...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTTGAGGACCTGCGATTaGCCGCTGCCCGCGTTCCCA +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPLRTCD*PLPAFP
Trigger: TGGGAACGCGGGCAGCGGCAAATCGCAGGTCCTCAA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCAAGCCGATGCGCAGCTaGTCCAGGCACGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCKPMRS*SRHVGR
Trigger: CCTGCCCACGTGCCTGGACAAGCTGCGCATCGGCTT...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGAGCGCTGGCTCGGCCTaGGCCAGGTCTGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLSAGSA*ARSVSQ
Trigger: CTGTGAAACAGACCTGGCCAAGGCCGAGCCAGCGCT...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGGCAGCCTTCCAGCTCTaGTCCTTGGGGATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWAAFQL*SLGILP
Trigger: GGGCAAGATCCCCAAGGACAAGAGCTGGAAGGCTGC...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGTGCGGGTTGAAGTACTaGGTGTGTAGGATCAGGCGG +
Preference number: 5 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRCGLKY*VCRIRR
Trigger: CCGCCTGATCCTACACACCAAGTACTTCAACCCGCA...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTCTGGTGACCAGGAAGTaGATGAGCGTGCACTGGGCC +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCLVTRK*MSVHWA
Trigger: GGCCCAGTGCACGCTCATCAACTTCCTGGTCACCAG...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCATCTCCGACAGGGCCTaGATCCCGCCCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFISDRA*IPPQLW
Trigger: CCAGAGCTGGGGCGGGATCAAGGCCCTGTCGGAGAT...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS GCA 90 bp CTGAGACTTTCTGGTGCAAGGCCAGGGCTGCAGTCACCAGGTGGCTaGTCAGCCGCTGGATCACCAGAGGGGCTGAACGAAACGACAAGT +
Preference number: 5 (lower is better)
Translates to: LRLSGARPGLQSPGG*SAAGSPEGLNETTS
Trigger: ACTTGTCGTTTCGTTCAGCCCCTCTGGTGATCCAGCGGCTGAGCAGCCACCTGGTGACTGCAGCCCTGGCCTTGCACCAGAAAGTCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp GGCAGGGCGAAGTCTGTGGTCCAGGATTCAAGCTCCCTGATACGTTaGAGCAGATCGGCATACCAAGCTGCCAGGCCCATCATGGAGGGG +
Preference number: 5 (lower is better)
Translates to: GRAKSVVQDSSSLIR*SRSAYQAARPIMEG
Trigger: CCCCTCCATGATGGGCCTGGCAGCTTGGTATGCCGATCTGCTGCAACGTATCAGGGAGCTTGAATCCTGGACCACAGACTTCGCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp GGGTCACGCTGGATGAGTGGCTGCCCCAGGTTGAAGTGGCAGTCCTaGTCCACACCCTCTACCCACTGCTGGTATTTCTTCATCCGGCAG +
Preference number: 5 (lower is better)
Translates to: GSRWMSGCPRLKWQS*STPSTHCWYFFIRQ
Trigger: CTGCCGGATGAAGAAATACCAGCAGTGGGTAGAGGGTGTGGACCAGGACTGCCACTTCAACCTGGGGCAGCCACTCATCCAGCGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTAGCTCCAGGCTCCACTaGAGCTGCCCAGACACGGGA +
Preference number: 5 (lower is better)
Translates to: VERGCSLLCLRGVSVHACSSRLH*SCPDTG
Trigger: TCCCGTGTCTGGGCAGCTCAAGTGGAGCCTGGAGCT...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTATGGTGTCGTCCGTCTaGGTGTCCAGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: DPTSCLREPSSWAPESQIMVSSV*VSSSSG
Trigger: CCCTGAGGAGCTGGACACCAAGACGGACGACACCAT...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTTGAGCAAGGTCTGCTaGAAGGGGCGGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWLSKVC*KGRQSH
Trigger: GTGTGACTGCCGCCCCTTCAAGCAGACCTTGCTCAA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTAGGCTGTCGAAGAGCTaGGACAGGTGGCGGCTCACC +
Preference number: 5 (lower is better)
Translates to: VERGCSLLCLRGVSVHACRLSKS*DRWRLT
Trigger: GGTGAGCCGCCACCTGTCCAAGCTCTTCGACAGCCT...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTGCCAGGGTGAGGACCTaGTTGTCGTCCATGACTGTG +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCARVRT*LSSMTV
Trigger: CACAGTCATGGACGACAACAAGGTCCTCACCCTGGC...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGGCCACCGTGCCATACTaGTCCACCTCTGGCATGTTC +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWATVPY*STSGMF
Trigger: GAACATGCCAGAGGTGGACAAGTATGGCACGGTGGC...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGTTGATGGCTGTGCAGTaGACCACAGCAGGGAACTTC +
Preference number: 5 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRLMAVQ*TTAGNF
Trigger: GAAGTTCCCTGCTGTGGTCAACTGCACAGCCATCAA...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCGCAGCCTTCCAGCTCTaGTCCTTGGGGATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVAAFQL*SLGILP
Trigger: GGGCAAGATCCCCAAGGACAAGAGCTGGAAGGCTGC...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGATCCGGACGCTCTTaGGCCACCACAGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRSGRS*ATTAAR
Trigger: CCTGGCCGCTGTGGTGGCCAAAGAGCGTCCGGATCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCCCCTGGGCGCCAAACTaGCGCCTCTCGGCTACTACA +
Preference number: 5 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFPWAPN*RLSATT
Trigger: TGTAGTAGCCGAGAGGCGCAAGTTTGGCGCCCAGGG...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGGCTGCCAGGATCCACTaGGCTGCCTTCTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWAARIH*AAFSLV
Trigger: GACCAAAGAGAAGGCAGCCAAGTGGATCCTGGCAGC...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS TCA 90 bp CAGTGGTGGGCAGGGCGAAGTCTGTGGTCCAGGATTCAAGCTCCCTaGTACGTTGCAGCAGATCGGCATACCAAGCTGCCAGGCCCATCA +
Preference number: 5 (lower is better)
Translates to: QWWAGRSLWSRIQAP*YVAADRHTKLPGPS
Trigger: TGATGGGCCTGGCAGCTTGGTATGCCGATCTGCTGCAACGTATCAGGGAGCTTGAATCCTGGACCACAGACTTCGCCCTGCCCACCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp TTGACTTGGATGAGGCTGGTGAATGGGTCACGCTGGATGAGTGGCTaGCCCAGGTTGAAGTGGCAGTCCTGGTCCACACCCTCTACCCAC +
Preference number: 5 (lower is better)
Translates to: LTWMRLVNGSRWMSG*PRLKWQSWSTPSTH
Trigger: GTGGGTAGAGGGTGTGGACCAGGACTGCCACTTCAACCTGGGGCAGCCACTCATCCAGCGTGACCCATTCACCAGCCTCATCCAAGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp GTGGCGCGCATTCGGTCCAGCACGCGATTCAGCCACACTTCCACCTaGCCGGAGAGGTCACACTCCTTATCAAAGTCCACAAACTCGTCC +
Preference number: 5 (lower is better)
Translates to: VARIRSSTRFSHTST*PERSHSLSKSTNSS
Trigger: GGACGAGTTTGTGGACTTTGATAAGGAGTGTGACCTCTCCGGGCAGGTGGAAGTGTGGCTGAATCGCGTGCTGGACCGAATGCGCGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp AAGCAGTGCTTCTTTTCCTCGTCCCAGCGGTGTCGAAGCTGCGACTaGCAGGTGAAGGCCTGCGAACTCTCCACGGTGATCATCTTGGCC +
Preference number: 5 (lower is better)
Translates to: KQCFFSSSQRCRSCD*QVKACELSTVIILA
Trigger: GGCCAAGATGATCACCGTGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTGGGACGAGGAAAAGAAGCACTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS GCA 90 bp TTGGCGAAGCAGTGCTTCTTTTCCTCGTCCCAGCGGTGTCGAAGCTaGGACTGCCAGGTGAAGGCCTGCGAACTCTCCACGGTGATCATC +
Preference number: 5 (lower is better)
Translates to: LAKQCFFSSSQRCRS*DCQVKACELSTVII
Trigger: GATGATCACCGTGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTGGGACGAGGAAAAGAAGCACTGCTTCGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS CCA 90 bp TCTCCTCGTAAGTCACCACGGCTTCTGGAATTTCGTGGCGCAACGTaGCGCGCATTCGGTCCAGCACGCGATTCAGCCACACTTCCACCT +
Preference number: 5 (lower is better)
Translates to: SPRKSPRLLEFRGAT*RAFGPARDSATLPP
Trigger: AGGTGGAAGTGTGGCTGAATCGCGTGCTGGACCGAATGCGCGCCACGTTGCGCCACGAAATTCCAGAAGCCGTGGTGACTTACGAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp GATCCATTGTTCCCTCGGTTTCTCCTCGTAAGTCACCACGGCTTCTaGAATTTCGTGGCGCAACGTGGCGCGCATTCGGTCCAGCACGCG +
Preference number: 5 (lower is better)
Translates to: DPLFPRFLLVSHHGF*NFVAQRGAHSVQHA
Trigger: CGCGTGCTGGACCGAATGCGCGCCACGTTGCGCCACGAAATTCCAGAAGCCGTGGTGACTTACGAGGAGAAACCGAGGGAACAATGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp GCGTTTTTCTCCGTGAGCAGGCACTCCAGCAGGTACAGGATGGTCTaGATGACCGTAATCTCGGGCACGGGGGTGATCCTCTTGAAGCCG +
Preference number: 5 (lower is better)
Translates to: AFFSVSRHSSRYRMV*MTVISGTGVILLKP
Trigger: CGGCTTCAAGAGGATCACCCCCGTGCCCGAGATTACGGTCATCCAGACCATCCTGTACCTGCTGGAGTGCCTGCTCACGGAGAAAAACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp GTCTCTGGGATCTTCTCCAGGATGTCATCCAGCACAGCCTTCACCTaGAAACCAGTGCCGGGCAAGCCGATTGTGCCCAGGCTACCCTCT +
Preference number: 5 (lower is better)
Translates to: VSGIFSRMSSSTAFT*KPVPGKPIVPRLPS
Trigger: AGAGGGTAGCCTGGGCACAATCGGCTTGCCCGGCACTGGTTTCCAGGTGAAGGCTGTGCTGGATGACATCCTGGAGAAGATCCCAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTTGTCTGCCTTGAACTaGAGGAGGACAGAAGACACT +
Preference number: 5 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTLSALN*RRTEDT
Trigger: AGTGTCTTCTGTCCTCCTCAAGTTCAAGGCAGACAA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTACCGACAGGGAGATGTaGCCCAGGACCTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVTDREM*PRTSSI
Trigger: GATCGAGGAGGTCCTGGGCAACATCTCCCTGTCGGT...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCTTGGAAGAGCCCCTaGAGGACGCTCACCGACAGG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVAWKSP*RTLTDR
Trigger: CCTGTCGGTGAGCGTCCTCAAGGGGCTCTTCCAAGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTATGGTGTCGTCCGTCTaGGTGTCCAGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VERGCSLLCLRGVSVHACMVSSV*VSSSSG
Trigger: CCCTGAGGAGCTGGACACCAAGACGGACGACACCAT...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGCCACCTGCCTCTCCTaGACTTTCATCAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFATCLS*TFIRCP
Trigger: GGGGCACCTGATGAAAGTCAAGGAGAGGCAGGTGGC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGGCCTGCATGAGCTGTaGCCAGTGGCGGTCACGGAT +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVGLHEL*PVAVTD
Trigger: ATCCGTGACCGCCACTGGCAACAGCTCATGCAGGCC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGGCTGTCGAAGAGCTaGGACAGGTGGCGGCTCACC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRLSKS*DRWRLT
Trigger: GGTGAGCCGCCACCTGTCCAAGCTCTTCGACAGCCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGAGGGTGAGGACCTTGTaGTCGTCCATGACTGTGTTA +
Preference number: 5 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRRVRTL*SSMTVL
Trigger: TAACACAGTCATGGACGACAACAAGGTCCTCACCCT...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACCTGAGGTTCTCCAGCTaGTCACCCATCAGCACCGAC +
Preference number: 5 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYLRFSS*SPISTD
Trigger: GTCGGTGCTGATGGGTGACAAGCTGGAGAACCTCAG...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGCGCTGGCTCGGCCTaGGCCAGGTCTGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSAGSA*ARSVSQ
Trigger: CTGTGAAACAGACCTGGCCAAGGCCGAGCCAGCGCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTGTCCTTGGGGATCTaGCCCCCAGGCGCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLSLGI*PPGAVR
Trigger: CCTGACAGCGCCTGGGGGCAAGATCCCCAAGGACAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTCCAGCTCTTGTCCTaGGGGATCTTGCCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAFQLLS*GILPPG
Trigger: GCCTGGGGGCAAGATCCCCAAGGACAAGAGCTGGAA...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGGTAACGCCCTGGCTCTaGAAGTTCTCCACCGACTCA +
Preference number: 5 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWVTPWL*KFSTDS
Trigger: TGAGTCGGTGGAGAACTTCAAGAGCCAGGGCGTTAC...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTGGCCAGCGCTCTGTGTaGCACAGGATGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: LGWGSAQGAELCFATLKAGQRSV*HRMVAF
Trigger: GAATGCCACCATCCTGTGCAACACAGAGCGCTGGCC...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTCTGGTGACCAGGAAGTaGATGAGCGTGCACTGGGCC +
Preference number: 5 (lower is better)
Translates to: LGWGSAQGAELCFATLKALVTRK*MSVHWA
Trigger: GGCCCAGTGCACGCTCATCAACTTCCTGGTCACCAG...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTCAGCGGGGCCTCAGCCCACCTGTCTGCCCATCATCACTAGGGGCGGGTACCTTCTCCTCAATTTCATaGGCTGTGTGCTTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: SQRGLSPPVCPSSLGAGTFSSIS*AVCLVV
Trigger: GACCACCAAGCACACAGCCAATGAAATTGAGGAGAA...GGTACCCGCCCCTAGTGATGATGGGCAGACAGGTGGGCTGAGGCCCCGCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGAGGGCCTCCACGTCTTaGAGGGGGTCAACCCCGGGG +
Preference number: 5 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVRASTS*RGSTPG
Trigger: CCCCGGGGTTGACCCCCTCAAAGACGTGGAGGCCCT...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTTGCCCCAGGGACACGTaGTGGAGTTTCCCATTGTCT +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCCPRDT*WSFPLS
Trigger: AGACAATGGGAAACTCCACAACGTGTCCCTGGGGCA...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAATGCCCCAGGGACACGTaGTGGAGTTTCCCATTGTCT +
Preference number: 5 (lower is better)
Translates to: LWHFVCCTLTPPPACASQCPRDT*WSFPLS
Trigger: AGACAATGGGAAACTCCACAACGTGTCCCTGGGGCA...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCCCTGGGCGCCAAACTaGCGCCTCTCGGCTACTACA +
Preference number: 5 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCPWAPN*RLSATT
Trigger: TGTAGTAGCCGAGAGGCGCAAGTTTGGCGCCCAGGG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCCTGGGCGCCAAACTaGCGCCTCTCGGCTACTACA +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPWAPN*RLSATT
Trigger: TGTAGTAGCCGAGAGGCGCAAGTTTGGCGCCCAGGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAAGCCGATCTCTGCGTaGGGGTGCAGGCCGTACAGG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVKPISA*GCRPYR
Trigger: CCTGTACGGCCTGCACCCCAACGCAGAGATCGGCTT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGGTCTTCTCAGCAGCCTaGGCCATGATCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWVFSAA*AMISAM
Trigger: CATGGCTGAGATCATGGCCAAGGCTGCTGAGAAGAC...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS GCA 90 bp ATGGACACCTCAAGCCTCTCCTGCAGCTCCAGGCTCCACTTGAGCTaGCCAGACACGGGAGACATGTTTTTGTGGATGGGCGGTATCTGG +
Preference number: 5 (lower is better)
Translates to: MDTSSLSCSSRLHLS*PDTGDMFLWMGGIW
Trigger: CCAGATACCGCCCATCCACAAAAACATGTCTCCCGTGTCTGGGCAGCTCAAGTGGAGCCTGGAGCTGCAGGAGAGGCTTGAGGTGTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp AAGCAGTGCTTCTTTTCCTCGTCCCAGCGGTGTCGAAGCTGCGACTaGCAGGTGAAGGCCTGCGAACTCTCCACCTTAGCGGTGATCATC +
Preference number: 5 (lower is better)
Translates to: KQCFFSSSQRCRSCD*QVKACELSTLAVII
Trigger: GATGATCACCGCTAAGGTGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTGGGACGAGGAAAAGAAGCACTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS CCA 90 bp CTGGTGAATGGGTCACGCTGGATGAGTGGCTGCCCCAGGTTGAAGTaGCAGTCCTGGTCCACACCCTCTACCCACTGCTGGTATTTCTTC +
Preference number: 5 (lower is better)
Translates to: LVNGSRWMSGCPRLK*QSWSTPSTHCWYFF
Trigger: GAAGAAATACCAGCAGTGGGTAGAGGGTGTGGACCAGGACTGCCACTTCAACCTGGGGCAGCCACTCATCCAGCGTGACCCATTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp GAAGTTGACTTGGATGAGGCTGGTGAATGGGTCACGCTGGATGAGTaGCTGCCCCAGGTTGAAGTGGCAGTCCTGGTCCACACCCTCTAC +
Preference number: 5 (lower is better)
Translates to: EVDLDEAGEWVTLDE*LPQVEVAVLVHTLY
Trigger: GTAGAGGGTGTGGACCAGGACTGCCACTTCAACCTGGGGCAGCCACTCATCCAGCGTGACCCATTCACCAGCCTCATCCAAGTCAACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp CTCGATCAGCGACAGGAAGCCAGCCTCGTCGCCCATCTCCAGAGATaGGTTGTAGGTCAGACCGTCTTTATCCAGCTCCATGCGGATCTC +
Preference number: 5 (lower is better)
Translates to: LDQRQEASLVAHLQR*VVGQTVFIQLHADL
Trigger: GAGATCCGCATGGAGCTGGATAAAGACGGTCTGACCTACAACCCATCTCTGGAGATGGGCGACGAGGCTGGCTTCCTGTCGCTGATCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCACTCAGCAAAGACCTaGACCAGTTCGAAGACCTCG +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWHSAKT*TSSKTS
Trigger: CGAGGTCTTCGAACTGGTCAAGGTCTTTGCTGAGTG...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGCTTTCAAACAGGGGGTaGGCTGACCACTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPLSNRG*ADHSCM
Trigger: CATGCAGGAGTGGTCAGCCAACCCCCTGTTTGAAAG...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTTTGATGTCCTTCCACTaGGTGGTCTTCCAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCLMSFH*VVFQSS
Trigger: CGACGACTGGAAGACCACCAAGTGGAAGGACATCAA...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGGCCTGCATGAGCTGTaGCCAGTGGCGGTCACGGAT +
Preference number: 5 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLGLHEL*PVAVTD
Trigger: ATCCGTGACCGCCACTGGCAACAGCTCATGCAGGCC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGTGCAGCTGCACCTGGTaGTCCTCCAGCGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SLAAGNQASLLCVALGTECSCTW*SSSVST
Trigger: GGTGGAGACGCTGGAGGACAACCAGGTGCAGCTGCA...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTACAAACTCGTCCTCCTaGCTGTACATCCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: DPTSCLREPSSWAPESQITNSSS*LYIPSP
Trigger: TGGGCTGGGGATGTACAGCAAGGAGGACGAGTTTGT...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGACCGAGTGTCGGACTaGAAGCAGCTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCDRVSD*KQLFQL
Trigger: CAGCTGGAAGAGCTGCTTCAAGTCCGACACTCGGTC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGCTCGTACAGCTCCTaGGGGGAGTCGGGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSSYSS*GESGGA
Trigger: CGCCCCGCCCGACTCCCCCAAGGAGCTGTACGAGCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCTGAGGTTCTCCAGCTaGTCACCCATCAGCACCGAC +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCLRFSS*SPISTD
Trigger: GTCGGTGCTGATGGGTGACAAGCTGGAGAACCTCAG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTTGATGGCTGTGCAGTaGACCACAGCAGGGAACTTC +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWLMAVQ*TTAGNF
Trigger: GAAGTTCCCTGCTGTGGTCAACTGCACAGCCATCAA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGGCAATGGCTTTCTCCTaGCTGACCTTCTCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPAMAFS*LTFSVS
Trigger: GGAGACGGAGAAGGTCAGCAAGGAGAAAGCCATTGC...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCGCAATGGCTTTCTCCTaGCTGACCTTCTCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVAMAFS*LTFSVS
Trigger: GGAGACGGAGAAGGTCAGCAAGGAGAAAGCCATTGC...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCTCGGTCAGGTTGTTCTaGTTCAGGGTGTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFSVRLF*FRVSRA
Trigger: GGCCCTGGACACCCTGAACAAGAACAACCTGACCGA...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTTTCCAGCTCTTGTCCTaGGGGATCTTGCCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCFQLLS*GILPPG
Trigger: GCCTGGGGGCAAGATCCCCAAGGACAAGAGCTGGAA...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCAGCCTTCCAGCTCTaGTCCTTGGGGATCTTGCCC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVAAFQL*SLGILP
Trigger: GGGCAAGATCCCCAAGGACAAGAGCTGGAAGGCTGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTGATCCACTTGATGCCTaGGAGCTGGGCATCCACAAT +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCDPLDA*ELGIHN
Trigger: ATTGTGGATGCCCAGCTCCAAGGCATCAAGTGGATC...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGTTGTTTTTGATCCACTaGATGCCTTGGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRLFLIH*MPWSWA
Trigger: TGCCCAGCTCCAAGGCATCAAGTGGATCAAAAACAA...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGAGATCCGGACGCTCTTaGGCCACCACAGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHERSGRS*ATTAAR
Trigger: CCTGGCCGCTGTGGTGGCCAAAGAGCGTCCGGATCT...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GAGCTCAGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGTTGAACTCGATCTCCTaGGTGCACATCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ELSVDAAVCREHLMPWLWLNSIS*VHISRV
Trigger: CACCCTGGAGATGTGCACCAAGGAGATCGAGTTCAA...CCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACTGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGAGAAAGGACTGTGGGTaGAAGAAGCCAGCTAGCCAC +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWRKDCG*KKPASH
Trigger: GTGGCTAGCTGGCTTCTTCAACCCACAGTCCTTTCT...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS TCA 90 bp ACTTCATGGACACCTCAAGCCTCTCCTGCAGCTCCAGGCTCCACTTaGGCTGCCCAGACACGGGAGACATGTTTTTGTGGATGGGCGGTA +
Preference number: 5 (lower is better)
Translates to: TSWTPQASPAAPGST*AAQTRETCFCGWAV
Trigger: TACCGCCCATCCACAAAAACATGTCTCCCGTGTCTGGGCAGCTCAAGTGGAGCCTGGAGCTGCAGGAGAGGCTTGAGGTGTCCATGAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp CTGCATTTTCCACAACCATGGCTTGGATTCTCACACCAGCTTCCTTaGCCGCAGCGTACCGCTTGTTCAGGTTGGCCACCCTGCCGTCCA +
Preference number: 5 (lower is better)
Translates to: LHFPQPWLGFSHQLP*PQRTACSGWPPCRP
Trigger: TGGACGGCAGGGTGGCCAACCTGAACAAGCGGTACGCTGCGGTCAAGGAAGCTGGTGTGAGAATCCAAGCCATGGTTGTGGAAAATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp TGCAGTCACCAGGTGGCTGCTCAGCCGCTGGATCACCAGAGGGGCTaGACGAAACGACAAGTGTTGTGCCAGGATCGTGTTGTAGATGGA +
Preference number: 5 (lower is better)
Translates to: CSHQVAAQPLDHQRG*TKRQVLCQDRVVDG
Trigger: TCCATCTACAACACGATCCTGGCACAACACTTGTCGTTTCGTTCAGCCCCTCTGGTGATCCAGCGGCTGAGCAGCCACCTGGTGACTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp CGTTCTACCTTCTTGTCCAGGATACCCAGCCATCTCGCCACCAGGTaGATGTTCTGTGGCAAGGAGCCCCTCACCTGCAGAATGACCCAG +
Preference number: 5 (lower is better)
Translates to: RSTFLSRIPSHLATR*MFCGKEPLTCRMTQ
Trigger: CTGGGTCATTCTGCAGGTGAGGGGCTCCTTGCCACAGAACATTCACCTGGTGGCGAGATGGCTGGGTATCCTGGACAAGAAGGTAGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS GCA 90 bp GGCCCCCACACATGTACAGGAGCTTTGCGGAAGACTCCATACAGTTaGAGTCGTCAAAGGCTTGGCAGAAGATGGTGGCCAGCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: GPHTCTGALRKTPYS*SRQRLGRRWWPASC
Trigger: ACAGGAGGCTGGCCACCATCTTCTGCCAAGCCTTTGACGACTGCAACTGTATGGAGTCTTCCGCAAAGCTCCTGTACATGTGTGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp TGCCCCAGGTTGAAGTGGCAGTCCTGGTCCACACCCTCTACCCACTaGTGGTATTTCTTCATCCGGCAGCTTTGCAGCAACCCCATCATC +
Preference number: 5 (lower is better)
Translates to: CPRLKWQSWSTPSTH*WYFFIRQLCSNPII
Trigger: GATGATGGGGTTGCTGCAAAGCTGCCGGATGAAGAAATACCAGCAGTGGGTAGAGGGTGTGGACCAGGACTGCCACTTCAACCTGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp CGCTTGAACAGAAAACTCCAGCGCTTGATGGTGTTGAGCAAGGTCTaGTTGAAGGGGCGGCAGTCACACTGCAGCCAGCCATGGAAGACC +
Preference number: 5 (lower is better)
Translates to: RLNRKLQRLMVLSKV*LKGRQSHCSQPWKT
Trigger: GGTCTTCCATGGCTGGCTGCAGTGTGACTGCCGCCCCTTCAAGCAGACCTTGCTCAACACCATCAAGCGCTGGAGTTTTCTGTTCAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp AGCTGCCCAGACACGGGAGACATGTTTTTGTGGATGGGCGGTATCTaGCCATCTGCAGAGGCCGCCATCTGGGCATCGTACATGAGTTTG +
Preference number: 5 (lower is better)
Translates to: SCPDTGDMFLWMGGI*PSAEAAIWASYMSL
Trigger: CAAACTCATGTACGATGCCCAGATGGCGGCCTCTGCAGATGGCCAGATACCGCCCATCCACAAAAACATGTCTCCCGTGTCTGGGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp CCCAGGTTGAAGTGGCAGTCCTGGTCCACACCCTCTACCCACTGCTaGTATTTCTTCATCCGGCAGCTTTGCAGCAACCCCATCATCTCG +
Preference number: 5 (lower is better)
Translates to: PRLKWQSWSTPSTHC*YFFIRQLCSNPIIS
Trigger: CGAGATGATGGGGTTGCTGCAAAGCTGCCGGATGAAGAAATACCAGCAGTGGGTAGAGGGTGTGGACCAGGACTGCCACTTCAACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp CTTCTCATACGAGTCAATCTGCTGCTGGAACTGAGCCAGGGTAGGTaGTGTCTTGGGGATGGTGTCGTCCGTCTTGGTGTCCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: LLIRVNLLLELSQGR*CLGDGVVRLGVQLL
Trigger: GAGGAGCTGGACACCAAGACGGACGACACCATCCCCAAGACACCACCTACCCTGGCTCAGTTCCAGCAGCAGATTGACTCGTATGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp TCTGCTGCCAGCTGGTCACCTCCTTCAGGAAGTGTGACAGGTACTTaGACATCATCAGGTTCTGCAGCTGCACCTGGTTGTCCTCCAGCG +
Preference number: 5 (lower is better)
Translates to: SAASWSPPSGSVTGT*TSSGSAAAPGCPPA
Trigger: CGCTGGAGGACAACCAGGTGCAGCTGCAGAACCTGATGATGTCCAAGTACCTGTCACACTTCCTGAAGGAGGTGACCAGCTGGCAGCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp GTGGACTTAGAGCGAATGAACTCAGGGTCAAAGGTGGGGTTGCCTTaGTACGGCTTGAAGGCCTTTAGGCAGGCCTCGGGGATGTGTTCC +
Preference number: 5 (lower is better)
Translates to: VDLERMNSGSKVGLP*YGLKAFRQASGMCS
Trigger: GGAACACATCCCCGAGGCCTGCCTAAAGGCCTTCAAGCCGTACCAAGGCAACCCCACCTTTGACCCTGAGTTCATTCGCTCTAAGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp ACGAAGGCCGAGATGAGCAGCACATCCCCACACAGGGTAACGCCCTaGCTCTTGAAGTTCTCCACCGACTCAGCCCAGCGTACATTTTCT +
Preference number: 5 (lower is better)
Translates to: TKAEMSSTSPHRVTP*LLKFSTDSAQRTFS
Trigger: AGAAAATGTACGCTGGGCTGAGTCGGTGGAGAACTTCAAGAGCCAGGGCGTTACCCTGTGTGGGGATGTGCTGCTCATCTCGGCCTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp GATCTCGTCCGTCAGATTTATCACGCGCTGCTTCACCTCGTCGGCTaGCGCCGTCTTCTGGATGGCTTTCTCAAACACCACGTTGAAGGC +
Preference number: 5 (lower is better)
Translates to: DLVRQIYHALLHLVG*RRLLDGFLKHHVEG
Trigger: GCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAAGACGGCGCCAGCCGACGAGGTGAAGCAGCGCGTGATAAATCTGACGGACGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp AGGAGCCCTCTCGGGGAGGAGCGGTCATGTCCTCCCGATTCTTCTTaGTCACTTCCACAGACAGACACATCTTATCCAGGGGCCACTCAT +
Preference number: 5 (lower is better)
Translates to: RSPLGEERSCPPDSS*SLPQTDTSYPGATH
Trigger: ATGAGTGGCCCCTGGATAAGATGTGTCTGTCTGTGGAAGTGACCAAGAAGAATCGGGAGGACATGACCGCTCCTCCCCGAGAGGGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp CGAACAGGCTGGCAGACTTGCACAGCGCCTCCATCACGCCCTCCATaGCCGAGATGCTCTTTTGTTGCTTATTCAGGGACTTGTAGGGCT +
Preference number: 5 (lower is better)
Translates to: RTGWQTCTAPPSRPP*PRCSFVAYSGTCRA
Trigger: AGCCCTACAAGTCCCTGAATAAGCAACAAAAGAGCATCTCGGCCATGGAGGGCGTGATGGAGGCGCTGTGCAAGTCTGCCAGCCTGTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCAGCACGTCCCGGATTaGATGGGACCAGTCGATGAT +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCQHVPD*MGPVDD
Trigger: ATCATCGACTGGTCCCATCAAATCCGGGACGTGCTG...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTGCTTCCTTCAGCCCTaGGGTGACATTCATGTAGAC +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWCFLQP*GDIHVD
Trigger: GTCTACATGAATGTCACCCAAGGGCTGAAGGAAGCA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCATCTCGATGATCTGGTaGCAGAACTCCCGGAGGATG +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVISMIW*QNSRRM
Trigger: CATCCTCCGGGAGTTCTGCAACCAGATCATCGAGAT...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGCTTGGAAGAGCCCCTaGAGGACGCTCACCGACAGG +
Preference number: 5 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEAWKSP*RTLTDR
Trigger: CCTGTCGGTGAGCGTCCTCAAGGGGCTCTTCCAAGC...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCCACTCAGCAAAGACCTaGACCAGTTCGAAGACCTCG +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVHSAKT*TSSKTS
Trigger: CGAGGTCTTCGAACTGGTCAAGGTCTTTGCTGAGTG...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGACAATGAGCTCCAGGTaGCCTACAAACTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWTMSSR*PTNFRK
Trigger: CTTCCGGAAGTTTGTAGGCAACCTGGAGCTCATTGT...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTTTGAGCAAGGTCTGCTaGAAGGGGCGGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCLSKVC*KGRQSH
Trigger: GTGTGACTGCCGCCCCTTCAAGCAGACCTTGCTCAA...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTATGTTTTTCACGGTGTaGTCCAGTCCCACGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCMFFTV*SSPTKA
Trigger: TGCCTTCGTGGGACTGGACAACACCGTGAAAAACAT...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGGCCTTGTCTACAATGTaGCGGACCTCGTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLALSTM*RTSSSY
Trigger: GTATGAGGACGAGGTCCGCAACATTGTAGACAAGGC...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGGTGGCTCCAGGTTCTTaGGACCTCAAACCAGATGGA +
Preference number: 5 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLVAPGS*DLKPDG
Trigger: TCCATCTGGTTTGAGGTCCAAAGAACCTGGAGCCAC...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGGTGGCTCCAGGTTCTTaGGACCTCAAACCAGATGGA +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPVAPGS*DLKPDG
Trigger: TCCATCTGGTTTGAGGTCCAAAGAACCTGGAGCCAC...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTATCCCCAGCCCAAACTaGAGTGGCTTTCCACTAGCG +
Preference number: 5 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFIPSPN*SGFPLA
Trigger: CGCTAGTGGAAAGCCACTCAAGTTTGGGCTGGGGAT...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCACAAACTCGTCCTCCTaGCTGTACATCCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFTNSSS*LYIPSP
Trigger: TGGGCTGGGGATGTACAGCAAGGAGGACGAGTTTGT...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCAACGATCTTGGGGATGTaGAAGTCTCTCAGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: QDAGSLAAGNQASLLCVATILGM*KSLRAL
Trigger: GAGGGCCCTGAGAGACTTCAACATCCCCAAGATCGT...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGACCGAGTGTCGGACTaGAAGCAGCTCTTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVDRVSD*KQLFQL
Trigger: CAGCTGGAAGAGCTGCTTCAAGTCCGACACTCGGTC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGTCTTGTTGAGGGATTaGAGGACCTGCGATTTGCCG +
Preference number: 5 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYVLLRD*RTCDLP
Trigger: CGGCAAATCGCAGGTCCTCAAATCCCTCAACAAGAC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCCACCGTGCCATACTaGTCCACCTCTGGCATGTTC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVATVPY*STSGMF
Trigger: GAACATGCCAGAGGTGGACAAGTATGGCACGGTGGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCAGCCAGCTCGGCGTaGGCTTCCTCCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSASSA*ASSRAC
Trigger: GCAGGCCCTGGAGGAAGCCAACGCCGAGCTGGCTGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTGTAACGCCCTGGCTCTaGAAGTTCTCCACCGACTCA +
Preference number: 5 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVVTPWL*KFSTDS
Trigger: TGAGTCGGTGGAGAACTTCAAGAGCCAGGGCGTTAC...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTTCTGCAGGGCGGTCTaGTTCTTCCATTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPFCRAV*FFHSLG
Trigger: CCCCAAAGAATGGAAGAACAAGACCGCCCTGCAGAA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGGGCCTCCACGTCTTaGAGGGGGTCAACCCCGGGG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRASTS*RGSTPG
Trigger: CCCCGGGGTTGACCCCCTCAAAGACGTGGAGGCCCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACGCGAAGAGGATGCACTaGAACTCGATCTCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYAKRMH*NSISLV
Trigger: CACCAAGGAGATCGAGTTCAAGTGCATCCTCTTCGC...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCACCCGAGTCTGTCTCTTaGGGCTGCATTTCTAGGACG +
Preference number: 5 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAPESVS*GCISRT
Trigger: CGTCCTAGAAATGCAGCCCAAAGAGACAGACTCGGG...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGAGCGCCGCATCTCATaGGTGAGGATGTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFERRIS*VRMFIL
Trigger: GAGGATGAACATCCTCACCAATGAGATGCGGCGCTC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTTCCTCCCGATTCTTCTaGGTCACTTCCACAGACAGA +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCSSRFF*VTSTDR
Trigger: TCTGTCTGTGGAAGTGACCAAGAAGAATCGGGAGGA...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAATCCTCCCGATTCTTCTaGGTCACTTCCACAGACAGA +
Preference number: 5 (lower is better)
Translates to: LWHFVCCTLTPPPACASQSSRFF*VTSTDR
Trigger: TCTGTCTGTGGAAGTGACCAAGAAGAATCGGGAGGA...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS TCA 90 bp CTGCACGCGGTGAAAGAAGGAATTCATTCGGGAGAAGGCGAGGGATaGAGGGAATTCCCACGGCACGGGCGGCCTGTCCTTAAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: LHAVKEGIHSGEGEG*REFPRHGRPVLKEK
Trigger: CTTTTCTTTAAGGACAGGCCGCCCGTGCCGTGGGAATTCCCTTCATCCCTCGCCTTCTCCCGAATGAATTCCTTCTTTCACCGCGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp AACGAAACGACAAGTGTTGTGCCAGGATCGTGTTGTAGATGGAGGTaGGGGCCTCCTGGCCGGGGAAGCTCACAGCAAACACGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: NETTSVVPGSCCRWR*GPPGRGSSQQTRRS
Trigger: ACTTCTGCGTGTTTGCTGTGAGCTTCCCCGGCCAGGAGGCCCTCACCTCCATCTACAACACGATCCTGGCACAACACTTGTCGTTTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp AGACACGGGAGACATGTTTTTGTGGATGGGCGGTATCTGGCCATCTaGAGAGGCCGCCATCTGGGCATCGTACATGAGTTTGGCGTTGTC +
Preference number: 5 (lower is better)
Translates to: RHGRHVFVDGRYLAI*RGRHLGIVHEFGVV
Trigger: GACAACGCCAAACTCATGTACGATGCCCAGATGGCGGCCTCTGCAGATGGCCAGATACCGCCCATCCACAAAAACATGTCTCCCGTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp TCGATGGTTTGCTTCAGGGGCTCAAACATGCTATCGGTGGCCACCTaGCTCTCCTTGACTTTCATCAGGTGCCCCATGACCTCTACCAGC +
Preference number: 5 (lower is better)
Translates to: SMVCFRGSNMLSVAT*LSLTFIRCPMTSTS
Trigger: GCTGGTAGAGGTCATGGGGCACCTGATGAAAGTCAAGGAGAGGCAGGTGGCCACCGATAGCATGTTTGAGCCCCTGAAGCAAACCATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp CACCTTGAGCTGCCTGCGTACTTTCTCGATGAAGAATTTCCAGCATaGCTCTCGAGTGTCGGCTATACCGAGGGACTTCACCTGTGGCCG +
Preference number: 5 (lower is better)
Translates to: HLELPAYFLDEEFPA*LSSVGYTEGLHLWP
Trigger: CGGCCACAGGTGAAGTCCCTCGGTATAGCCGACACTCGAGAGGCATGCTGGAAATTCTTCATCGAGAAAGTACGCAGGCAGCTCAAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp GACCTCATAGAAGCGCACAATGTTGATACACCAGGAGCACAGGCCTaGCGCGGCCGTGGACTTAGAGCGAATGAACTCAGGGTCAAAGGT +
Preference number: 5 (lower is better)
Translates to: DLIEAHNVDTPGAQA*RGRGLRANELRVKG
Trigger: ACCTTTGACCCTGAGTTCATTCGCTCTAAGTCCACGGCCGCGGCAGGCCTGTGCTCCTGGTGTATCAACATTGTGCGCTTCTATGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp CCAGCATGCCTCTCGAGTGTCGGCTATACCGAGGGACTTCACCTGTaGCCGCATGGAGGAGATGATGTTTTCAAGGTCTTCGTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: PACLSSVGYTEGLHL*PHGGDDVFKVFVPK
Trigger: TTTGGGGACGAAGACCTTGAAAACATCATCTCCTCCATGCGGCCACAGGTGAAGTCCCTCGGTATAGCCGACACTCGAGAGGCATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp AGATTTATCACGCGCTGCTTCACCTCGTCGGCTGGCGCCGTCTTCTaGATGGCTTTCTCAAACACCACGTTGAAGGCCTTGAGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: RFITRCFTSSAGAVF*MAFSNTTLKALSEN
Trigger: GTTCTCGCTCAAGGCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAAGACGGCGCCAGCCGACGAGGTGAAGCAGCGCGTGATAAATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTCCCCACTTGTCTGCCTaGAACTTGAGGAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: VERGCSLLCLRGVSVHACPHLSA*NLRRTE
Trigger: TTCTGTCCTCCTCAAGTTCAAGGCAGACAAGTGGGG...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACTGCTTCCTTCAGCCCTaGGGTGACATTCATGTAGAC +
Preference number: 5 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYCFLQP*GDIHVD
Trigger: GTCTACATGAATGTCACCCAAGGGCTGAAGGAAGCA...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTATCTCGATGATCTGGTaGCAGAACTCCCGGAGGATG +
Preference number: 5 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVISMIW*QNSRRM
Trigger: CATCCTCCGGGAGTTCTGCAACCAGATCATCGAGAT...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCGAGCAGTTCGATGGTTaGCTTCAGGGGCTCAAACAT +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVEQFDG*LQGLKH
Trigger: ATGTTTGAGCCCCTGAAGCAAACCATCGAACTGCTC...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTTTGATGTCCTTCCACTaGGTGGTCTTCCAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: VERGCSLLCLRGVSVHACLMSFH*VVFQSS
Trigger: CGACGACTGGAAGACCACCAAGTGGAAGGACATCAA...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGGCCTGCATGAGCTGTaGCCAGTGGCGGTCACGGAT +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHGLHEL*PVAVTD
Trigger: ATCCGTGACCGCCACTGGCAACAGCTCATGCAGGCC...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTACCTCGTCCTCATACTaGTGGAGGTTCAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVTSSSY*WRFSCS
Trigger: GCTACAGCTGAACCTCCACAAGTATGAGGACGAGGT...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTGCCTTGTCTACAATGTaGCGGACCTCGTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFALSTM*RTSSSY
Trigger: GTATGAGGACGAGGTCCGCAACATTGTAGACAAGGC...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAATCCTCCATCAAAGCTTaGAATTCCTGGTCAATGGCG +
Preference number: 5 (lower is better)
Translates to: LWHFVCCTLTPPPACASQSSIKA*NSWSMA
Trigger: CGCCATTGACCAGGAATTCAAAGCTTTGATGGAGGA...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTCCTCCATCAAAGCTTaGAATTCCTGGTCAATGGCG +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWSSIKA*NSWSMA
Trigger: CGCCATTGACCAGGAATTCAAAGCTTTGATGGAGGA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGAGAGATCCGGTTTGTTaGTGGCTTCCACCACGTTTG +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPRDPVC*WLPPRL
Trigger: CAAACGTGGTGGAAGCCACAAACAAACCGGATCTCT...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACAAACTCGTCCTCCTaGCTGTACATCCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTNSSS*LYIPSP
Trigger: TGGGCTGGGGATGTACAGCAAGGAGGACGAGTTTGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTGTCTTGTTGAGGGATTaGAGGACCTGCGATTTGCCG +
Preference number: 5 (lower is better)
Translates to: LGWGSAQGAELCFATLKAVLLRD*RTCDLP
Trigger: CGGCAAATCGCAGGTCCTCAAATCCCTCAACAAGAC...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCAGAGGCAGTGCACAGCAGCTAGGGTTCCCCAAGGAGGTTAGAGTCCCTCTGAGGGTGAGGACCTTGTaGTCGTCCATGACTGTGTTA +
Preference number: 5 (lower is better)
Translates to: SRGSAQQLGFPKEVRVPLRVRTL*SSMTVL
Trigger: TAACACAGTCATGGACGACAACAAGGTCCTCACCCT...CAGAGGGACTCTAACCTCCTTGGGGAACCCTAGCTGCTGTGCACTGCCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCAAGGTCCACACAGCCACCCCACAGCTGGGTCTGGAGCATTTGCAGGGTGTGTTTCTCATCAACCATCTaGTCCCCATACACTCGCTCA +
Preference number: 5 (lower is better)
Translates to: PRSTQPPHSWVWSICRVCFSSTI*SPYTRS
Trigger: TGAGCGAGTGTATGGGGACAAGATGGTTGATGAGAA...ACACACCCTGCAAATGCTCCAGACCCAGCTGTGGGGTGGCTGTGTGGACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTACGTCCTTCAGCAGCTaGTTCAGTTGTGCCACATCC +
Preference number: 5 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVTSFSS*FSCATS
Trigger: GGATGTGGCACAACTGAACAAGCTGCTGAAGGACGT...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCACGTCCTTCAGCAGCTaGTTCAGTTGTGCCACATCC +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCTSFSS*FSCATS
Trigger: GGATGTGGCACAACTGAACAAGCTGCTGAAGGACGT...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAATCGTCAGGTATATCTaGGACATCTCGTTGACGGTG +
Preference number: 5 (lower is better)
Translates to: LWHFVCCTLTPPPACASQIVRYI*DISLTV
Trigger: CACCGTCAACGAGATGTCCAAGATATACCTGACGAT...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCAATGGCTTTCTCCTaGCTGACCTTCTCCGTCTCC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVAMAFS*LTFSVS
Trigger: GGAGACGGAGAAGGTCAGCAAGGAGAAAGCCATTGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACAATGCCGAGGTAAGGTaGCTCAGGTTGGCATTGAGT +
Preference number: 5 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYNAEVR*LRLALS
Trigger: ACTCAATGCCAACCTGAGCAACCTTACCTCGGCATT...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGATCCACTTGATGCCTaGGAGCTGGGCATCCACAAT +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCDPLDA*ELGIHN
Trigger: ATTGTGGATGCCCAGCTCCAAGGCATCAAGTGGATC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCTGGTACTCCACCTCCTaGTCGCCGATCTTAATGAAC +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVWYSTS*SPILMN
Trigger: GTTCATTAAGATCGGCGACAAGGAGGTGGAGTACCA...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGCGGGTTGAAGTACTaGGTGTGTAGGATCAGGCGG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVCGLKY*VCRIRR
Trigger: CCGCCTGATCCTACACACCAAGTACTTCAACCCGCA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGTTCTCAAACACCACGTaGAAGGCCTTGAGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPFSNTT*KALSEN
Trigger: GTTCTCGCTCAAGGCCTTCAACGTGGTGTTTGAGAA...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAATCTCCGACAGGGCCTaGATCCCGCCCCAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKISDRA*IPPQLW
Trigger: CCAGAGCTGGGGCGGGATCAAGGCCCTGTCGGAGAT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTGCGAAGAGGATGCACTaGAACTCGATCTCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVAKRMH*NSISLV
Trigger: CACCAAGGAGATCGAGTTCAAGTGCATCCTCTTCGC...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCCCGAGTCTGTCTCTTaGGGCTGCATTTCTAGGACG +
Preference number: 5 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCPESVS*GCISRT
Trigger: CGTCCTAGAAATGCAGCCCAAAGAGACAGACTCGGG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGTCTTCTCAGCAGCCTaGGCCATGATCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCVFSAA*AMISAM
Trigger: CATGGCTGAGATCATGGCCAAGGCTGCTGAGAAGAC...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS TCA 90 bp TCCTTTCAAACAGGGGGTTGGCTGACCACTCCTGCATGGCCTGGGTaGTCCCTTCTACGTTTTGCTTGGCTTTCTGGATCCGGTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SFQTGGWLTTPAWPG*SLLRFAWLSGSGSA
Trigger: TGCAGAACCGGATCCAGAAAGCCAAGCAAAACGTAGAAGGGATCACCCAGGCCATGCAGGAGTGGTCAGCCAACCCCCTGTTTGAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp GCACCTGGTTGTCCTCCAGCGTCTCCACCAGCACTTCGTCAGACTTaGGCATCATGGTGCCTGTCCGTGGATGTAACTCGTGCTCAAATT +
Preference number: 5 (lower is better)
Translates to: APGCPPASPPALRQT*ASWCLSVDVTRAQI
Trigger: AATTTGAGCACGAGTTACATCCACGGACAGGCACCATGATGCTCAAGTCTGACGAAGTGCTGGTGGAGACGCTGGAGGACAACCAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp TGTCGGCTATACCGAGGGACTTCACCTGTGGCCGCATGGAGGAGATaGTGTTTTCAAGGTCTTCGTCCCCAAACAAGCCTGGGATTTCCC +
Preference number: 5 (lower is better)
Translates to: CRLYRGTSPVAAWRR*CFQGLRPQTSLGFP
Trigger: GGGAAATCCCAGGCTTGTTTGGGGACGAAGACCTTGAAAACATCATCTCCTCCATGCGGCCACAGGTGAAGTCCCTCGGTATAGCCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp ATCTTGCCTCCCATCACAAACATCTCGTTCTTCAGCCTGTGGACCTaGTTCACAATGTCTTCTGACACCACCCGGGGCCAGCCATCCATG +
Preference number: 5 (lower is better)
Translates to: ILPPITNISFFSLWT*FTMSSDTTRGQPSM
Trigger: CATGGATGGCTGGCCCCGGGTGGTGTCAGAAGACATTGTGAAGCAGGTCCACAGGCTGAAGAACGAGATGTTTGTGATGGGAGGCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp CTCGTTGTAACTGTCCAGGACGTCCTTCAGCAGCTTGTTCAGTTGTaGCACATCCGTGACGGGGAAGTACTTGGGGTCACCGATTCCTTG +
Preference number: 5 (lower is better)
Translates to: LVVTVQDVLQQLVQL*HIRDGEVLGVTDSL
Trigger: CAAGGAATCGGTGACCCCAAGTACTTCCCCGTCACGGATGTGGCACAACTGAACAAGCTGCTGAAGGACGTCCTGGACAGTTACAACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp CCTTTGATCTTGCCTCCCATCACAAACATCTCGTTCTTCAGCCTGTaGACCTGCTTCACAATGTCTTCTGACACCACCCGGGGCCAGCCA +
Preference number: 5 (lower is better)
Translates to: PLILPPITNISFFSL*TCFTMSSDTTRGQP
Trigger: TGGCTGGCCCCGGGTGGTGTCAGAAGACATTGTGAAGCAGGTCCACAGGCTGAAGAACGAGATGTTTGTGATGGGAGGCAAGATCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp TCCTGCATGGCCTGGGTGATCCCTTCTACGTTTTGCTTGGCTTTCTaGATCCGGTTCTGCAGGTTGTATAGCATCTCCCGCATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SCMAWVIPSTFCLAF*IRFCRLYSISRISW
Trigger: CCAGGAGATGCGGGAGATGCTATACAACCTGCAGAACCGGATCCAGAAAGCCAAGCAAAACGTAGAAGGGATCACCCAGGCCATGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp TCCTTCCTTTCAAACAGGGGGTTGGCTGACCACTCCTGCATGGCCTaGGTGATCCCTTCTACGTTTTGCTTGGCTTTCTGGATCCGGTTC +
Preference number: 5 (lower is better)
Translates to: SFLSNRGLADHSCMA*VIPSTFCLAFWIRF
Trigger: GAACCGGATCCAGAAAGCCAAGCAAAACGTAGAAGGGATCACCCAGGCCATGCAGGAGTGGTCAGCCAACCCCCTGTTTGAAAGGAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp AGAAACCCGGGACCCCAGAGCACAGCATGTGGTGACAGCTCCTGCTGTCCTTACTCCAGAGGGTCATATTaGCACTCAGCAAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: RNPGPQSTACGDSSCCPYSRGSY*HSAKTL
Trigger: CAAGGTCTTTGCTGAGTGCAAATATGACCCTCTGGA...GTAAGGACAGCAGGAGCTGTCACCACATGCTGTGCTCTGGGGTCCCGGGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTTCCAGAGGGTCATATTaGCACTCAGCAAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: DPTSCLREPSSWAPESQISRGSY*HSAKTL
Trigger: CAAGGTCTTTGCTGAGTGCAAATATGACCCTCTGGA...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGCTCCAGGCTCCACTaGAGCTGCCCAGACACGGGA +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSSRLH*SCPDTG
Trigger: TCCCGTGTCTGGGCAGCTCAAGTGGAGCCTGGAGCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATACCGCTTGTTCAGGTaGGCCACCCTGCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKYRLFR*ATLPSR
Trigger: CCTGGACGGCAGGGTGGCCAACCTGAACAAGCGGTA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTGAGCAGTTCGATGGTTaGCTTCAGGGGCTCAAACAT +
Preference number: 5 (lower is better)
Translates to: LGWGSAQGAELCFATLKAEQFDG*LQGLKH
Trigger: ATGTTTGAGCCCCTGAAGCAAACCATCGAACTGCTC...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGCACTTTGTGTGCTGTACCCTGACCCCACCTCCTGCTTGCGCGAGCCAAAAAGACCTCACGTCCTaGGCAAACTTCTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: LWHFVCCTLTPPPACASQKDLTS*ANFLQS
Trigger: TGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTTT...TTGGCTCGCGCAAGCAGGAGGTGGGGTCAGGGTACAGCACACAAAGTGCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCAGGGTTTCATCTCCTaGTCCAAAGACCTCACGTCC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVQGFIS*SKDLTS
Trigger: GGACGTGAGGTCTTTGGACAAGGAGATGAAACCCTG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTATGTTTTTCACGGTGTaGTCCAGTCCCACGAAGGCA +
Preference number: 5 (lower is better)
Translates to: VERGCSLLCLRGVSVHACMFFTV*SSPTKA
Trigger: TGCCTTCGTGGGACTGGACAACACCGTGAAAAACAT...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGCCTTGTCTACAATGTaGCGGACCTCGTCCTCATAC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVALSTM*RTSSSY
Trigger: GTATGAGGACGAGGTCCGCAACATTGTAGACAAGGC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGACTCCTTTACGGCCTaGTCTACAATGTTGCGGACC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVDSFTA*STMLRT
Trigger: GGTCCGCAACATTGTAGACAAGGCCGTAAAGGAGTC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGCACTTCGTCAGACTaGAGCATCATGGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSTSSD*SIMVPV
Trigger: GACAGGCACCATGATGCTCAAGTCTGACGAAGTGCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTGGCTTCCACCACGTTaGGTGTCTTCACAGCATCCT +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVWLPPR*VSSQHP
Trigger: AGGATGCTGTGAAGACACCAAACGTGGTGGAAGCCA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGAGATCCGGTTTGTTaGTGGCTTCCACCACGTTTG +
Preference number: 5 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFRDPVC*WLPPRL
Trigger: CAAACGTGGTGGAAGCCACAAACAAACCGGATCTCT...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCGGCCCGAATTGCATCTaGGACACACTTTACCTGTAC +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCGPNCI*DTLYLY
Trigger: GTACAGGTAAAGTGTGTCCAAGATGCAATTCGGGCC...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATAAGGGAATTCGCTCGTaGCTGGCCAGGGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHKGIRS*LARVRT
Trigger: GGTCCTCACCCTGGCCAGCAACGAGCGAATTCCCTT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGCTCGTACAGCTCCTaGGGGGAGTCGGGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSSYSS*GESGGA
Trigger: CGCCCCGCCCGACTCCCCCAAGGAGCTGTACGAGCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTACGAGGTGGGGAGGGCCCTAGTCTGTACTGCTGCTGCCCTACTGCAGGCAGGCCCTGCGAGGGTAACTaGATTGTTTTAAATTCATTG +
Preference number: 5 (lower is better)
Translates to: VRGGEGPSLYCCCPTAGRPCEGN*IVLNSL
Trigger: CAATGAATTTAAAACAATCAAGTTACCCTCGCAGGG...CCTGCCTGCAGTAGGGCAGCAGCAGTACAGACTAGGGCCCTCCCCACCTCGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGATCGTCAGGTATATCTaGGACATCTCGTTGACGGTG +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPIVRYI*DISLTV
Trigger: CACCGTCAACGAGATGTCCAAGATATACCTGACGAT...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGCGCTGGCTCGGCCTaGGCCAGGTCTGTTTCACAG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSAGSA*ARSVSQ
Trigger: CTGTGAAACAGACCTGGCCAAGGCCGAGCCAGCGCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGTCGGTCAGGTTGTTCTaGTTCAGGGTGTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVSVRLF*FRVSRA
Trigger: GGCCCTGGACACCCTGAACAAGAACAACCTGACCGA...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTGTCCTTGGGGATCTaGCCCCCAGGCGCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLSLGI*PPGAVR
Trigger: CCTGACAGCGCCTGGGGGCAAGATCCCCAAGGACAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GACCCCACCTCCTGCTTGCGCGAGCCAAGTTCCTGGGCTCCTGAAAGTCAGATTGTAAGGTTGCTCAGGTaGGCATTGAGTTCTGCAATC +
Preference number: 5 (lower is better)
Translates to: DPTSCLREPSSWAPESQIVRLLR*ALSSAI
Trigger: GATTGCAGAACTCAATGCCAACCTGAGCAACCTTAC...AATCTGACTTTCAGGAGCCCAGGAACTTGGCTCGCGCAAGCAGGAGGTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCTTGTTTTTGATCCACTaGATGCCTTGGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVLFLIH*MPWSWA
Trigger: TGCCCAGCTCCAAGGCATCAAGTGGATCAAAAACAA...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTTGGTACTCCACCTCCTaGTCGCCGATCTTAATGAAC +
Preference number: 5 (lower is better)
Translates to: LGWGSAQGAELCFATLKAWYSTS*SPILMN
Trigger: GTTCATTAAGATCGGCGACAAGGAGGTGGAGTACCA...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTTGAAAGGGGTTGCAGTCTGCTGTGTCTCCGAGGGGTGTCTGTGCATGCCTGTCCCGTGGGAGGCTCATaGGTGATTTTGATGGCATTT +
Preference number: 5 (lower is better)
Translates to: VERGCSLLCLRGVSVHACPVGGS*VILMAF
Trigger: AAATGCCATCAAAATCACCAATGAGCCTCCCACGGG...ACAGGCATGCACAGACACCCCTCGGAGACACAGCAGACTGCAACCCCTTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTAAAAGATCCAGCGCCTaGTGCAGGTTGGCATACATG +
Preference number: 5 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFKRSSA*CRLAYM
Trigger: CATGTATGCCAACCTGCACAAGGCGCTGGATCTTTT...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGAGCGCCGCATCTCATaGGTGAGGATGTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLERRIS*VRMFIL
Trigger: GAGGATGAACATCCTCACCAATGAGATGCGGCGCTC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGAAAGGACTGTGGGTaGAAGAAGCCAGCTAGCCAC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRKDCG*KKPASH
Trigger: GTGGCTAGCTGGCTTCTTCAACCCACAGTCCTTTCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp AGTCTCCAGGGTCCAGAGGGTCATATTTGCACTCAGCAAAGACCTTaGCCAGTTCGAAGACCTCGTCGTAGATCTGGGTCACCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: SLQGPEGHICTQQRP*PVRRPRRRSGSPGS
Trigger: GGAACCTGGTGACCCAGATCTACGACGAGGTCTTCGAACTGGTCAAGGTCTTTGCTGAGTGCAAATATGACCCTCTGGACCCTGGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp TGTGATGGTCAGCTCACCCTTCAGTCCCAGGTTCAGCTCCTTCAGTaGGCGCCGCATCTCATTGGTGAGGATGTTCATCCTCTCACATTC +
Preference number: 5 (lower is better)
Translates to: CDGQLTLQSQVQLLQ*APHLIGEDVHPLTF
Trigger: GAATGTGAGAGGATGAACATCCTCACCAATGAGATGCGGCGCTCACTGAAGGAGCTGAACCTGGGACTGAAGGGTGAGCTGACCATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp TTTTCCAGGATCTCAACTATCTTGTTCACCTTGGGCCTGTTTAGCTaGTCGTGGATGCACTGCAGGTTCATGAGCCGGGCGTCCCAGAAC +
Preference number: 5 (lower is better)
Translates to: FSRISTILFTLGLFS*SWMHCRFMSRASQN
Trigger: GTTCTGGGACGCCCGGCTCATGAACCTGCAGTGCATCCACGAGCAGCTAAACAGGCCCAAGGTGAACAAGATAGTTGAGATCCTGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp GCACCTTCTCCATCCCGGACTCCTTTACGGCCTTGTCTACAATGTTaGGGACCTCGTCCTCATACTTGTGGAGGTTCAGCTGTAGCAGAT +
Preference number: 5 (lower is better)
Translates to: APSPSRTPLRPCLQC*GPRPHTCGGSAVAD
Trigger: ATCTGCTACAGCTGAACCTCCACAAGTATGAGGACGAGGTCCGCAACATTGTAGACAAGGCCGTAAAGGAGTCCGGGATGGAGAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp TTTTTGTGGATGGGCGGTATCTGGCCATCTGCAGAGGCCGCCATCTaGGCATCGTACATGAGTTTGGCGTTGTCAAGCTCCGTATTGAAC +
Preference number: 5 (lower is better)
Translates to: FLWMGGIWPSAEAAI*ASYMSLALSSSVLN
Trigger: GTTCAATACGGAGCTTGACAACGCCAAACTCATGTACGATGCCCAGATGGCGGCCTCTGCAGATGGCCAGATACCGCCCATCCACAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp AATTCCTGGTCAATGGCGTCGAAGCGCTTAGAATCCTCTGGTAGCTaGGCTCTGATGTCTTCTGAGCCGATGAAGATGCTCTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: NSWSMASKRLESSGS*ALMSSEPMKMLSRW
Trigger: CCACCTGGAGAGCATCTTCATCGGCTCAGAAGACATCAGAGCCCAGCTACCAGAGGATTCTAAGCGCTTCGACGCCATTGACCAGGAATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp CACAAACTCGTCCTCCTTGCTGTACATCCCCAGCCCAAACTTGAGTaGCTTTCCACTAGCGTCAAGGCGGAACTTGAGCTTACACAGGCT +
Preference number: 5 (lower is better)
Translates to: HKLVLLAVHPQPKLE*LSTSVKAELELTQA
Trigger: AGCCTGTGTAAGCTCAAGTTCCGCCTTGACGCTAGTGGAAAGCCACTCAAGTTTGGGCTGGGGATGTACAGCAAGGAGGACGAGTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp CACCGCAGACTTGATGTACTGGGTAGCCAGGTCCATCTTGAGGTCTaGGATTGCGTAGCCTTTCTTGAGTGTGATCTGGAAGACGTCCAG +
Preference number: 5 (lower is better)
Translates to: HRRLDVLGSQVHLEV*DCVAFLECDLEDVQ
Trigger: CTGGACGTCTTCCAGATCACACTCAAGAAAGGCTACGCAATCCCAGACCTCAAGATGGACCTGGCTACCCAGTACATCAAGTCTGCGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp TGCGGGTTGAAGTACTTGGTGTGTAGGATCAGGCGGAAACTGGGGTaGTACTCCACCTCCTTGTCGCCGATCTTAATGAACCTCCCCTTT +
Preference number: 5 (lower is better)
Translates to: CGLKYLVCRIRRKLG*YSTSLSPILMNLPF
Trigger: AAAGGGGAGGTTCATTAAGATCGGCGACAAGGAGGTGGAGTACCACCCCAGTTTCCGCCTGATCCTACACACCAAGTACTTCAACCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTATAAGACGATGCCATTaGCTTCCTTCAGCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCIRRCH*LPSALG
Trigger: CCCAAGGGCTGAAGGAAGCAAATGGCATCGTCTTAT...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGATAAGACGATGCCATTaGCTTCCTTCAGCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVIRRCH*LPSALG
Trigger: CCCAAGGGCTGAAGGAAGCAAATGGCATCGTCTTAT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TTCCCAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTCTTGCTGAAGTTGACTaGGATGAGGCTGGTGAATGG +
Preference number: 5 (lower is better)
Translates to: FPGCWLLSCWESGFTAVCLAEVD*DEAGEW
Trigger: CCATTCACCAGCCTCATCCAAGTCAACTTCAGCAAG...ACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCTTGCTGAAGTTGACTaGGATGAGGCTGGTGAATGG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLAEVD*DEAGEW
Trigger: CCATTCACCAGCCTCATCCAAGTCAACTTCAGCAAG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACAATGAGCTCCAGGTaGCCTACAAACTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTMSSR*PTNFRK
Trigger: CTTCCGGAAGTTTGTAGGCAACCTGGAGCTCATTGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGAACAGGGCTTCCTTCTaGTTGTCCTTCCTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPNRASF*LSFLSN
Trigger: GTTTGAAAGGAAGGACAACAAGAAGGAAGCCCTGTT...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGAGCAGTTCGATGGTTaGCTTCAGGGGCTCAAACAT +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVEQFDG*LQGLKH
Trigger: ATGTTTGAGCCCCTGAAGCAAACCATCGAACTGCTC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCCGAAAGACCTCACGTCCTaGGCAAACTTCTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: GCFPSPLVSSCLSPNVLPKDLTS*ANFLQS
Trigger: TGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTTT...CGGCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGAGCACTTCGTCAGACTaGAGCATCATGGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: SLAAGNQASLLCVALGTESTSSD*SIMVPV
Trigger: GACAGGCACCATGATGCTCAAGTCTGACGAAGTGCT...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGGGTGGGGCAGTGCCCAAGGAGCTGAGCTTTGCTTTGCAACTTTGAAGGCTAAGTGTGACAGGTACTaGGACATCATCAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LGWGSAQGAELCFATLKAKCDRY*DIIRFC
Trigger: GCAGAACCTGATGATGTCCAAGTACCTGTCACACTT...AGCCTTCAAAGTTGCAAAGCAAAGCTCAGCTCCTTGGGCACTGCCCCACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGGCCCGAATTGCATCTaGGACACACTTTACCTGTAC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVGPNCI*DTLYLY
Trigger: GTACAGGTAAAGTGTGTCCAAGATGCAATTCGGGCC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGGGTGAGGACCTTGTaGTCGTCCATGACTGTGTTA +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRVRTL*SSMTVL
Trigger: TAACACAGTCATGGACGACAACAAGGTCCTCACCCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAAGGGAATTCGCTCGTaGCTGGCCAGGGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKKGIRS*LARVRT
Trigger: GGTCCTCACCCTGGCCAGCAACGAGCGAATTCCCTT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTCAGAAGATGTTGGGTTaGGCAAAGAGATTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFQKMLG*AKRFSS
Trigger: GGAGGAGAATCTCTTTGCCAAACCCAACATCTTCTG...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTCAGAAGATGTTGGGTTaGGCAAAGAGATTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVQKMLG*AKRFSS
Trigger: GGAGGAGAATCTCTTTGCCAAACCCAACATCTTCTG...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTCCAGCTCTTGTCCTaGGGGATCTTGCCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKFQLLS*GILPPG
Trigger: GCCTGGGGGCAAGATCCCCAAGGACAAGAGCTGGAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGGAATGTGTCCACCTaGCCCATCATGATCTTCGCA +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRNVST*PIMIFA
Trigger: TGCGAAGATCATGATGGGCAAGGTGGACACATTCCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGGCCAGCGCTCTGTGTaGCACAGGATGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKGQRSV*HRMVAF
Trigger: GAATGCCACCATCCTGTGCAACACAGAGCGCTGGCC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACTGGTGACCAGGAAGTaGATGAGCGTGCACTGGGCC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLVTRK*MSVHWA
Trigger: GGCCCAGTGCACGCTCATCAACTTCCTGGTCACCAG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGTCATTGGCTGTGTGCTaGGTGGTCTCCAGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SLAAGNQASLLCVALGTESLAVC*VVSRFS
Trigger: GGAAAACCTGGAGACCACCAAGCACACAGCCAATGA...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCTTCTGCAGGGCGGTCTaGTTCTTCCATTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLFCRAV*FFHSLG
Trigger: CCCCAAAGAATGGAAGAACAAGACCGCCCTGCAGAA...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTTGTGGAGTTTCCCATaGTCTATGGTAAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWLWSFP*SMVNPS
Trigger: ACTGGGATTTACCATAGACAATGGGAAACTCCACAA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGTTGAACTCGATCTCCTaGGTGCACATCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SLAAGNQASLLCVALGTELNSIS*VHISRV
Trigger: CACCCTGGAGATGTGCACCAAGGAGATCGAGTTCAA...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCATGATCTCAGCCATGTaGAAGGTCTCTGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCMISAM*KVSGIF
Trigger: GAAGATCCCAGAGACCTTCAACATGGCTGAGATCAT...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTCCTCCCGATTCTTCTaGGTCACTTCCACAGACAGA +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVSSRFF*VTSTDR
Trigger: TCTGTCTGTGGAAGTGACCAAGAAGAATCGGGAGGA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp TGTGGTCTCTGCGCTCAGCAGCTTCACGTCAATCGCTTCCAGTTCTaGCTTGATCAGCGGGAACTCCACATCCTTCACCGTCGTCTTTAT +
Preference number: 5 (lower is better)
Translates to: CGLCAQQLHVNRFQF*LDQRELHILHRRLY
Trigger: ATAAAGACGACGGTGAAGGATGTGGAGTTCCCGCTGATCAAGTCAGAACTGGAAGCGATTGACGTGAAGCTGCTGAGCGCAGAGACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp TTCTTGTTGTCCTTCCTTTCAAACAGGGGGTTGGCTGACCACTCCTaGATGGCCTGGGTGATCCCTTCTACGTTTTGCTTGGCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: FLLSFLSNRGLADHS*MAWVIPSTFCLAFW
Trigger: CCAGAAAGCCAAGCAAAACGTAGAAGGGATCACCCAGGCCATGCAGGAGTGGTCAGCCAACCCCCTGTTTGAAAGGAAGGACAACAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp TCGTCAGACTTGAGCATCATGGTGCCTGTCCGTGGATGTAACTCGTaGTCAAATTCCATGGTAGTCCAGGTGATGTCCAGGGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSDLSIMVPVRGCNS*SNSMVVQVMSRVFS
Trigger: GCTGAAGACCCTGGACATCACCTGGACTACCATGGAATTTGAGCACGAGTTACATCCACGGACAGGCACCATGATGCTCAAGTCTGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp TGTGCCACATCCGTGACGGGGAAGTACTTGGGGTCACCGATTCCTTaGGTAAAGTGGCAGAAGATGTTGGGTTTGGCAAAGAGATTCTCC +
Preference number: 5 (lower is better)
Translates to: CATSVTGKYLGSPIP*VKWQKMLGLAKRFS
Trigger: GGAGAATCTCTTTGCCAAACCCAACATCTTCTGCCACTTTACGCAAGGAATCGGTGACCCCAAGTACTTCCCCGTCACGGATGTGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp AGACTTGATGTACTGGGTAGCCAGGTCCATCTTGAGGTCTGGGATTaGGTAGCCTTTCTTGAGTGTGATCTGGAAGACGTCCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: RLDVLGSQVHLEVWD*VAFLECDLEDVQGT
Trigger: AGTGCCCTGGACGTCTTCCAGATCACACTCAAGAAAGGCTACGCAATCCCAGACCTCAAGATGGACCTGGCTACCCAGTACATCAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp GTAGAGAAGGGAGGCCCTTTCTGCGGCTGGGCGGTAGTTCTCTCGTaGCTCATTGATCTTTACTTCTGTGATTTTGGCCTCTTGGACCTT +
Preference number: 5 (lower is better)
Translates to: VEKGGPFCGWAVVLS*LIDLYFCDFGLLDL
Trigger: AAGGTCCAAGAGGCCAAAATCACAGAAGTAAAGATCAATGAGGCACGAGAGAACTACCGCCCAGCCGCAGAAAGGGCCTCCCTTCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp AGTCACACTGCAGCCAGCCATGGAAGACCTTGGTGTTCTCACAGCTaGACACCTCCTCATACAGCTTCTCATACGAGTCAATCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SHTAASHGRPWCSHS*TPPHTASHTSQSAA
Trigger: AGCAGCAGATTGACTCGTATGAGAAGCTGTATGAGGAGGTGTCCAGCTGTGAGAACACCAAGGTCTTCCATGGCTGGCTGCAGTGTGACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGGATCTCAACTATCTaGTTCACCTTGGGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: YSVGRVAAWHLSVTAGFFRISTI*FTLGLF
Trigger: AAACAGGCCCAAGGTGAACAAGATAGTTGAGATCCT...GAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCCTCCTGTCCAGGTCTaGAATCTTAGTCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVPPVQV*NLSLKV
Trigger: GACTTTGAGACTAAGATTCAAGACCTGGACAGGAGG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGGACTCCTTTACGGCCTaGTCTACAATGTTGCGGACC +
Preference number: 5 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHEDSFTA*STMLRT
Trigger: GGTCCGCAACATTGTAGACAAGGCCGTAAAGGAGTC...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATATCCCCAGCCCAAACTaGAGTGGCTTTCCACTAGCG +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHIPSPN*SGFPLA
Trigger: CGCTAGTGGAAAGCCACTCAAGTTTGGGCTGGGGAT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTTAAACTTCTTTTTCTaGGCCCGAATTGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWLNFFF*ARIASW
Trigger: CCAAGATGCAATTCGGGCCAAGAAAAAGAAGTTTAA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGTCCACGATGCTCTGTTaGATGATCTTCTCAAAATTC +
Preference number: 5 (lower is better)
Translates to: LSLLCGKGGCMAPVCHGWSTMLC*MIFSKF
Trigger: GAATTTTGAGAAGATCATCAAACAGAGCATCGTGGA...CCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAAGCCGATGCGCAGCTaGTCCAGGCACGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFKPMRS*SRHVGR
Trigger: CCTGCCCACGTGCCTGGACAAGCTGCGCATCGGCTT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGCAGAAGATGTTGGGTTaGGCAAAGAGATTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVQKMLG*AKRFSS
Trigger: GGAGGAGAATCTCTTTGCCAAACCCAACATCTTCTG...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGATCGTCAGGTATATCTaGGACATCTCGTTGACGGTG +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVIVRYI*DISLTV
Trigger: CACCGTCAACGAGATGTCCAAGATATACCTGACGAT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGACCACCTGGATCAGCTaGTCTGCATTCTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVTTWIS*SAFSFF
Trigger: GAAGAATGAGAATGCAGACAAGCTGATCCAGGTGGT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCTCTGCAATCTTGTTTTaGATCCGGGACAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCSAILF*IRDSFS
Trigger: GGAGAAACTGTCCCGGATCAAAAACAAGATTGCAGA...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAGGTTGCTCAGGTaGGCATTGAGTTCTGCAATC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVVRLLR*ALSSAI
Trigger: GATTGCAGAACTCAATGCCAACCTGAGCAACCTTAC...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTGTTTTTGATCCACTaGATGCCTTGGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVLFLIH*MPWSWA
Trigger: TGCCCAGCTCCAAGGCATCAAGTGGATCAAAAACAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATGTGATTTTGGCCTCTaGGACCTTCTCCTCAATTTC +
Preference number: 5 (lower is better)
Translates to: QDAGSLAAGNQASLLCVACDFGL*DLLLNF
Trigger: GAAATTGAGGAGAAGGTCCAAGAGGCCAAAATCACA...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCGACCTGGAAGGTGACTaGAGCCAAGAAGATGAGCTT +
Preference number: 5 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLDLEGD*SQEDEL
Trigger: AAGCTCATCTTCTTGGCTCAAGTCACCTTCCAGGTC...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGATGATCTCAGCCATGTaGAAGGTCTCTGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVMISAM*KVSGIF
Trigger: GAAGATCCCAGAGACCTTCAACATGGCTGAGATCAT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGCTGCCAGGATCCACTaGGCTGCCTTCTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKAARIH*AAFSLV
Trigger: GACCAAAGAGAAGGCAGCCAAGTGGATCCTGGCAGC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp CCACATCCTTCACCGTCGTCTTTATCTCATTGTACCAGCCGACAATaGGCTCCAGGTTGCCTACAAACTTCCGGAAGGTTTCGTTCTCCG +
Preference number: 5 (lower is better)
Translates to: PHPSPSSLSHCTSRQ*APGCLQTSGRFRSP
Trigger: CGGAGAACGAAACCTTCCGGAAGTTTGTAGGCAACCTGGAGCTCATTGTCGGCTGGTACAATGAGATAAAGACGACGGTGAAGGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp TCTCTGCGCTCAGCAGCTTCACGTCAATCGCTTCCAGTTCTGACTTaGTCAGCGGGAACTCCACATCCTTCACCGTCGTCTTTATCTCAT +
Preference number: 5 (lower is better)
Translates to: SLRSAASRQSLPVLT*SAGTPHPSPSSLSH
Trigger: ATGAGATAAAGACGACGGTGAAGGATGTGGAGTTCCCGCTGATCAAGTCAGAACTGGAAGCGATTGACGTGAAGCTGCTGAGCGCAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp TCAATGGTGAAGGAGCCAGAAGTAGGGTTCATGCAAGCCACATACTaGCAGTTGTGCACGTCCTTCAGGGTCAGTTTCTGCCGGTCATAC +
Preference number: 5 (lower is better)
Translates to: SMVKEPEVGFMQATY*QLCTSFRVSFCRSY
Trigger: GTATGACCGGCAGAAACTGACCCTGAAGGACGTGCACAACTGTCAGTATGTGGCTTGCATGAACCCTACTTCTGGCTCCTTCACCATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp TTTACGGCCTTGTCTACAATGTTGCGGACCTCGTCCTCATACTTGTaGAGGTTCAGCTGTAGCAGATCTGCCAGGGTAGTCTCTTCTGAC +
Preference number: 5 (lower is better)
Translates to: FTALSTMLRTSSSYL*RFSCSRSARVVSSD
Trigger: GTCAGAAGAGACTACCCTGGCAGATCTGCTACAGCTGAACCTCCACAAGTATGAGGACGAGGTCCGCAACATTGTAGACAAGGCCGTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACAGCACGTCCCGGATTaGATGGGACCAGTCGATGAT +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKQHVPD*MGPVDD
Trigger: ATCATCGACTGGTCCCATCAAATCCGGGACGTGCTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAGGATCTCAACTATCTaGTTCACCTTGGGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVRISTI*FTLGLF
Trigger: AAACAGGCCCAAGGTGAACAAGATAGTTGAGATCCT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCTTGGAAGAGCCCCTaGAGGACGCTCACCGACAGG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFAWKSP*RTLTDR
Trigger: CCTGTCGGTGAGCGTCCTCAAGGGGCTCTTCCAAGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCCCTCCTGTCCAGGTCTaGAATCTTAGTCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLPPVQV*NLSLKV
Trigger: GACTTTGAGACTAAGATTCAAGACCTGGACAGGAGG...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGCTTGCTGAAGTTGACTaGGATGAGGCTGGTGAATGG +
Preference number: 5 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVLAEVD*DEAGEW
Trigger: CCATTCACCAGCCTCATCCAAGTCAACTTCAGCAAG...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCCTTTCAAACAGGGGGTaGGCTGACCACTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: CNFEGLETQKVISCPTGSLSNRG*ADHSCM
Trigger: CATGCAGGAGTGGTCAGCCAACCCCCTGTTTGAAAG...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGAACAGGGCTTCCTTCTaGTTGTCCTTCCTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVNRASF*LSFLSN
Trigger: GTTTGAAAGGAAGGACAACAAGAAGGAAGCCCTGTT...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATCAGGGTTTCATCTCCTaGTCCAAAGACCTCACGTCC +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHQGFIS*SKDLTS
Trigger: GGACGTGAGGTCTTTGGACAAGGAGATGAAACCCTG...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGCAGCTGCACCTGGTaGTCCTCCAGCGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCSCTW*SSSVST
Trigger: GGTGGAGACGCTGGAGGACAACCAGGTGCAGCTGCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp AGCTCCTGCTGTCCTTACTCTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCTTAAACTTCTTTTTCTaGGCCCGAATTGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: SSCCPYSVGRVAAWHLSVLNFFF*ARIASW
Trigger: CCAAGATGCAATTCGGGCCAAGAAAAAGAAGTTTAA...GACAGACAGGTGCCATGCAGCCACCCTTCCCACAGAGTAAGGACAGCAGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAACGATCTTGGGGATGTaGAAGTCTCTCAGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKTILGM*KSLRAL
Trigger: GAGGGCCCTGAGAGACTTCAACATCCCCAAGATCGT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTGAGGACCTGCGATTaGCCGCTGCCCGCGTTCCCA +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLRTCD*PLPAFP
Trigger: TGGGAACGCGGGCAGCGGCAAATCGCAGGTCCTCAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCTCGTCAAAGAATTTCTaGACAGATGCTATGGTGACC +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCSSKNF*TDAMVT
Trigger: GGTCACCATAGCATCTGTCAAGAAATTCTTTGACGA...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGACCACCTGGATCAGCTaGTCTGCATTCTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: SLAAGNQASLLCVALGTETTWIS*SAFSFF
Trigger: GAAGAATGAGAATGCAGACAAGCTGATCCAGGTGGT...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp AGTGTAGATGCTGCTGTGTGCAGGGAGCACCTGATGCCCTGGCTGTGGCACTTTTTGAGTTCTGCAATCTaGTTTTTGATCCGGGACAGT +
Preference number: 5 (lower is better)
Translates to: SVDAAVCREHLMPWLWHFLSSAI*FLIRDS
Trigger: ACTGTCCCGGATCAAAAACAAGATTGCAGAACTCAA...AAAGTGCCACAGCCAGGGCATCAGGTGCTCCCTGCACACAGCAGCATCTACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGTAACGCCCTGGCTCTaGAAGTTCTCCACCGACTCA +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKVTPWL*KFSTDS
Trigger: TGAGTCGGTGGAGAACTTCAAGAGCCAGGGCGTTAC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAAGCCGATCTCTGCGTaGGGGTGCAGGCCGTACAGG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFKPISA*GCRPYR
Trigger: CCTGTACGGCCTGCACCCCAACGCAGAGATCGGCTT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCCGAGTCTGTCTCTTaGGGCTGCATTTCTAGGACG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPESVS*GCISRT
Trigger: CGTCCTAGAAATGCAGCCCAAAGAGACAGACTCGGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCATGATCTCAGCCATGTaGAAGGTCTCTGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLMISAM*KVSGIF
Trigger: GAAGATCCCAGAGACCTTCAACATGGCTGAGATCAT...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGTCTTCTCAGCAGCCTaGGCCATGATCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKVFSAA*AMISAM
Trigger: CATGGCTGAGATCATGGCCAAGGCTGCTGAGAAGAC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp AAGCAGCTCTTCCAGCTGGACGACTTTCAGCACAAAGCTGTCTTCTaGCTGAAGCTTGAGCTCCACGATGCTCTGTTTGATGATCTTCTC +
Preference number: 5 (lower is better)
Translates to: KQLFQLDDFQHKAVF*LKLELHDALFDDLL
Trigger: GAGAAGATCATCAAACAGAGCATCGTGGAGCTCAAGCTTCAGGCAGAAGACAGCTTTGTGCTGAAAGTCGTCCAGCTGGAAGAGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp CGGCTTCATCTTGATGAAGTAAACTCCTTTGGACTTGAGGGACTCTaGGAAGCCCAGGCAAGGAATGATCATACCAGCAGCATTGAGCGT +
Preference number: 5 (lower is better)
Translates to: RLHLDEVNSFGLEGL*EAQARNDHTSSIER
Trigger: ACGCTCAATGCTGCTGGTATGATCATTCCTTGCCTGGGCTTCCCAGAGTCCCTCAAGTCCAAAGGAGTTTACTTCATCAAGATGAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp AAGAATTTCTTGACAGATGCTATGGTGACCCTGTGCAGCGTCTCCTaGTCTTTCTCATCAACCATCTTGTCCCCATACACTCGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: KNFLTDAMVTLCSVS*SFSSTILSPYTRSA
Trigger: GGCTGAGCGAGTGTATGGGGACAAGATGGTTGATGAGAAAGACCAGGAGACGCTGCACAGGGTCACCATAGCATCTGTCAAGAAATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GGGAAGGCAGGCATGGGGATTACTGCAGGCTCTTGTTTATTCTTGAGCTCAGTGTTGTCTGCCTTGAACTaGAGGAGGACAGAAGACACT +
Preference number: 5 (lower is better)
Translates to: GKAGMGITAGSCLFLSSVLSALN*RRTEDT
Trigger: AGTGTCTTCTGTCCTCCTCAAGTTCAAGGCAGACAA...CACTGAGCTCAAGAATAAACAAGAGCCTGCAGTAATCCCCATGCCTGCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATACTATCTTGTTCACCTaGGGCCTGTTTAGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHTILFT*GLFSCS
Trigger: CGAGCAGCTAAACAGGCCCAAGGTGAACAAGATAGT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTACCGACAGGGAGATGTaGCCCAGGACCTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFTDREM*PRTSSI
Trigger: GATCGAGGAGGTCCTGGGCAACATCTCCCTGTCGGT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTATGGTGTCGTCCGTCTaGGTGTCCAGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFMVSSV*VSSSSG
Trigger: CCCTGAGGAGCTGGACACCAAGACGGACGACACCAT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCCACCTGCCTCTCCTaGACTTTCATCAGGTGCCCC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFATCLS*TFIRCP
Trigger: GGGGCACCTGATGAAAGTCAAGGAGAGGCAGGTGGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTGATGTCCTTCCACTaGGTGGTCTTCCAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLMSFH*VVFQSS
Trigger: CGACGACTGGAAGACCACCAAGTGGAAGGACATCAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACAGGGTTTCATCTCCTaGTCCAAAGACCTCACGTCC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKQGFIS*SKDLTS
Trigger: GGACGTGAGGTCTTTGGACAAGGAGATGAAACCCTG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCGACTCCTTTACGGCCTaGTCTACAATGTTGCGGACC +
Preference number: 5 (lower is better)
Translates to: CNFEGLETQKVISCPTGSDSFTA*STMLRT
Trigger: GGTCCGCAACATTGTAGACAAGGCCGTAAAGGAGTC...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTTTCTTGGCCCGAATaGCATCTTGGACACACTTTA +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVFSWPE*HLGHTL
Trigger: TAAAGTGTGTCCAAGATGCAATTCGGGCCAAGAAAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCTCCACGATGCTCTGTTaGATGATCTTCTCAAAATTC +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCSTMLC*MIFSKF
Trigger: GAATTTTGAGAAGATCATCAAACAGAGCATCGTGGA...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAAGGGAATTCGCTCGTaGCTGGCCAGGGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFKGIRS*LARVRT
Trigger: GGTCCTCACCCTGGCCAGCAACGAGCGAATTCCCTT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTGATGGCTGTGCAGTaGACCACAGCAGGGAACTTC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLMAVQ*TTAGNF
Trigger: GAAGTTCCCTGCTGTGGTCAACTGCACAGCCATCAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCTCTGCAATCTTGTTTTaGATCCGGGACAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLSAILF*IRDSFS
Trigger: GGAGAAACTGTCCCGGATCAAAAACAAGATTGCAGA...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGGCCAGCGCTCTGTGTaGCACAGGATGGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFGQRSV*HRMVAF
Trigger: GAATGCCACCATCCTGTGCAACACAGAGCGCTGGCC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGATCCACTTGATGCCTaGGAGCTGGGCATCCACAAT +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKDPLDA*ELGIHN
Trigger: ATTGTGGATGCCCAGCTCCAAGGCATCAAGTGGATC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CTGTGGGAAGGGTGGCTGCATGGCACCTGTCTGTCACGGCTGGCTTTTTCAGTTAGATCACTGCCGTATTaGTTTTTGATCCACTTGATG +
Preference number: 5 (lower is better)
Translates to: LWEGWLHGTCLSRLAFSVRSLPY*FLIHLM
Trigger: CATCAAGTGGATCAAAAACAAATACGGCAGTGATCT...AACTGAAAAAGCCAGCCGTGACAGACAGGTGCCATGCAGCCACCCTTCCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCTCATTGGCTGTGTGCTaGGTGGTCTCCAGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: CNFEGLETQKVISCPTGSSLAVC*VVSRFS
Trigger: GGAAAACCTGGAGACCACCAAGCACACAGCCAATGA...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCATTGGCTGTGTGCTaGGTGGTCTCCAGGTTTTCC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSLAVC*VVSRFS
Trigger: GGAAAACCTGGAGACCACCAAGCACACAGCCAATGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCTTTACTTCTGTGATTTaGGCCTCTTGGACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLFTSVI*ASWTFS
Trigger: GGAGAAGGTCCAAGAGGCCAAAATCACAGAAGTAAA...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CAGGATGCTGGCTCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTCTCTCGTGCCTCATaGATCTTTACTTCTGTGATT +
Preference number: 5 (lower is better)
Translates to: QDAGSLAAGNQASLLCVAFSRAS*IFTSVI
Trigger: AATCACAGAAGTAAAGATCAATGAGGCACGAGAGAA...TGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGAGCCAGCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp CTGGCTGTTTCCCATCACCCCTGGTGTCCTCTTGCCTATCTCCCAATGTCCTGCTTCTCTCGTGCCTCATaGATCTTTACTTCTGTGATT +
Preference number: 5 (lower is better)
Translates to: LAVSHHPWCPLAYLPMSCFSRAS*IFTSVI
Trigger: AATCACAGAAGTAAAGATCAATGAGGCACGAGAGAA...GCAGGACATTGGGAGATAGGCAAGAGGACACCAGGGGTGATGGGAAACAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATCCCGTGGGAGGCTCATaGGTGATTTTGATGGCATTT +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHPVGGS*VILMAF
Trigger: AAATGCCATCAAAATCACCAATGAGCCTCCCACGGG...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATAAAAGATCCAGCGCCTaGTGCAGGTTGGCATACATG +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHKRSSA*CRLAYM
Trigger: CATGTATGCCAACCTGCACAAGGCGCTGGATCTTTT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGAAAGGACTGTGGGTaGAAGAAGCCAGCTAGCCAC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRKDCG*KKPASH
Trigger: GTGGCTAGCTGGCTTCTTCAACCCACAGTCCTTTCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp ATCTATTTTGTCGAAGAATTCGGTGAGCAGGGCCATGTTCTCCTCTaGTCCAATCAGTTTGCCCCACTTGTCTGCCTTGAACTTGAGGAG +
Preference number: 5 (lower is better)
Translates to: IYFVEEFGEQGHVLL*SNQFAPLVCLELEE
Trigger: CTCCTCAAGTTCAAGGCAGACAAGTGGGGCAAACTGATTGGAGCAGAGGAGAACATGGCCCTGCTCACCGAATTCTTCGACAAAATAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp TCGTTCTCCGAGAAGAGCTTCTCCGCGCTCTCTGGAATCTCTTTCTaGTGCTGGAAGTTCAAATATTTCACTTCTCTCAGGACTGCCACT +
Preference number: 5 (lower is better)
Translates to: SFSEKSFSALSGISF*CWKFKYFTSLRTAT
Trigger: AGTGGCAGTCCTGAGAGAAGTGAAATATTTGAACTTCCAGCAGCAGAAAGAGATTCCAGAGAGCGCGGAGAAGCTCTTCTCGGAGAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp AAAGACCTCACGTCCTTGGCAAACTTCTTACAGTCAATGTCCATCTaGTCCACATTGATGTCCTTCCACTTGGTGGTCTTCCAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: KDLTSLANFLQSMSI*STLMSFHLVVFQSS
Trigger: CGACGACTGGAAGACCACCAAGTGGAAGGACATCAATGTGGAGCAGATGGACATTGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCACTATCTTGTTCACCTaGGGCCTGTTTAGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: CNFEGLETQKVISCPTGSTILFT*GLFSCS
Trigger: CGAGCAGCTAAACAGGCCCAAGGTGAACAAGATAGT...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAACTATCTTGTTCACCTaGGGCCTGTTTAGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKTILFT*GLFSCS
Trigger: CGAGCAGCTAAACAGGCCCAAGGTGAACAAGATAGT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAATAAGACGATGCCATTaGCTTCCTTCAGCCCTTGGG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKIRRCH*LPSALG
Trigger: CCCAAGGGCTGAAGGAAGCAAATGGCATCGTCTTAT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATCCTCCTGTCCAGGTCTaGAATCTTAGTCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHPPVQV*NLSLKV
Trigger: GACTTTGAGACTAAGATTCAAGACCTGGACAGGAGG...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTGAGCAAGGTCTGCTaGAAGGGGCGGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLSKVC*KGRQSH
Trigger: GTGTGACTGCCGCCCCTTCAAGCAGACCTTGCTCAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAATGTTTTTCACGGTGTaGTCCAGTCCCACGAAGGCA +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKMFFTV*SSPTKA
Trigger: TGCCTTCGTGGGACTGGACAACACCGTGAAAAACAT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GTTCCTGGGCTCCTGAAAGTCAGATTCAGGGTTTGTTTCCCAGGATGCTGGCTCTTTTCTTGGCCCGAATaGCATCTTGGACACACTTTA +
Preference number: 5 (lower is better)
Translates to: VPGLLKVRFRVCFPGCWLFSWPE*HLGHTL
Trigger: TAAAGTGTGTCCAAGATGCAATTCGGGCCAAGAAAA...GAGCCAGCATCCTGGGAAACAAACCCTGAATCTGACTTTCAGGAGCCCAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCCAGGGTGAGGACCTaGTTGTCGTCCATGACTGTG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFARVRT*LSSMTV
Trigger: CACAGTCATGGACGACAACAAGGTCCTCACCCTGGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCTGAGGTTCTCCAGCTaGTCACCCATCAGCACCGAC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLRFSS*SPISTD
Trigger: GTCGGTGCTGATGGGTGACAAGCTGGAGAACCTCAG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATACCACCTGGATCAGCTaGTCTGCATTCTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHTTWIS*SAFSFF
Trigger: GAAGAATGAGAATGCAGACAAGCTGATCCAGGTGGT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTCGGTCAGGTTGTTCTaGTTCAGGGTGTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFSVRLF*FRVSRA
Trigger: GGCCCTGGACACCCTGAACAAGAACAACCTGACCGA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGTAAGGTTGCTCAGGTaGGCATTGAGTTCTGCAATC +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHVRLLR*ALSSAI
Trigger: GATTGCAGAACTCAATGCCAACCTGAGCAACCTTAC...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGGTACTCCACCTCCTaGTCGCCGATCTTAATGAAC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKWYSTS*SPILMN
Trigger: GTTCATTAAGATCGGCGACAAGGAGGTGGAGTACCA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp CCCCACGCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGTTCTCTCGTGCCTCATaGATCTTTACTTCTGTGATT +
Preference number: 5 (lower is better)
Translates to: PHACSIAQEHWVCKKSKVFSRAS*IFTSVI
Trigger: AATCACAGAAGTAAAGATCAATGAGGCACGAGAGAA...CACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGCGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCTTCTCAAACACCACGTaGAAGGCCTTGAGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: CNFEGLETQKVISCPTGSFSNTT*KALSEN
Trigger: GTTCTCGCTCAAGGCCTTCAACGTGGTGTTTGAGAA...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTCTCAAACACCACGTaGAAGGCCTTGAGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKFSNTT*KALSEN
Trigger: GTTCTCGCTCAAGGCCTTCAACGTGGTGTTTGAGAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAGACCTGGAAGGTGACTaGAGCCAAGAAGATGAGCTT +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKDLEGD*SQEDEL
Trigger: AAGCTCATCTTCTTGGCTCAAGTCACCTTCCAGGTC...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCCGTGGGAGGCTCATaGGTGATTTTGATGGCATTT +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPVGGS*VILMAF
Trigger: AAATGCCATCAAAATCACCAATGAGCCTCCCACGGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCTGCCAGGATCCACTaGGCTGCCTTCTCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFAARIH*AAFSLV
Trigger: GACCAAAGAGAAGGCAGCCAAGTGGATCCTGGCAGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 90 bp AGCTCTTCCAGCTGGACGACTTTCAGCACAAAGCTGTCTTCTGCCTaGAGCTTGAGCTCCACGATGCTCTGTTTGATGATCTTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: SSSSWTTFSTKLSSA*SLSSTMLCLMIFSK
Trigger: TTTTGAGAAGATCATCAAACAGAGCATCGTGGAGCTCAAGCTTCAGGCAGAAGACAGCTTTGTGCTGAAAGTCGTCCAGCTGGAAGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp CCAAGATCGTCAAAGAATTTCTTGACAGATGCTATGGTGACCCTGTaGAGCGTCTCCTGGTCTTTCTCATCAACCATCTTGTCCCCATAC +
Preference number: 5 (lower is better)
Translates to: PRSSKNFLTDAMVTL*SVSWSFSSTILSPY
Trigger: GTATGGGGACAAGATGGTTGATGAGAAAGACCAGGAGACGCTGCACAGGGTCACCATAGCATCTGTCAAGAAATTCTTTGACGATCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCCAGAGGGTCATATTaGCACTCAGCAAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSRGSY*HSAKTL
Trigger: CAAGGTCTTTGCTGAGTGCAAATATGACCCTCTGGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCTTTCAAACAGGGGGTaGGCTGACCACTCCTGCATG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLSNRG*ADHSCM
Trigger: CATGCAGGAGTGGTCAGCCAACCCCCTGTTTGAAAG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAAGTGTGACAGGTACTaGGACATCATCAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKKCDRY*DIIRFC
Trigger: GCAGAACCTGATGATGTCCAAGTACCTGTCACACTT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCCTCCATCAAAGCTTaGAATTCCTGGTCAATGGCG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSSIKA*NSWSMA
Trigger: CGCCATTGACCAGGAATTCAAAGCTTTGATGGAGGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTATCCCCAGCCCAAACTaGAGTGGCTTTCCACTAGCG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFIPSPN*SGFPLA
Trigger: CGCTAGTGGAAAGCCACTCAAGTTTGGGCTGGGGAT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TCCTTAGCTGCTGGGAATCAGGCTTCACTGCTGTGTGTGGCATTGGGAACTGAGCCCTGCGAGGGTAACTaGATTGTTTTAAATTCATTG +
Preference number: 5 (lower is better)
Translates to: SLAAGNQASLLCVALGTEPCEGN*IVLNSL
Trigger: CAATGAATTTAAAACAATCAAGTTACCCTCGCAGGG...CTCAGTTCCCAATGCCACACACAGCAGTGAAGCCTGATTCCCAGCAGCTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTCTCATCAACCATCTaGTCCCCATACACTCGCTCA +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKFSSTI*SPYTRS
Trigger: TGAGCGAGTGTATGGGGACAAGATGGTTGATGAGAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATGAGTCGTCAAAGAATTTCTaGACAGATGCTATGGTGACC +
Preference number: 5 (lower is better)
Translates to: YYQGLEQVAWSLLAVPHESSKNF*TDAMVT
Trigger: GGTCACCATAGCATCTGTCAAGAAATTCTTTGACGA...CTCATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTCTCCTCAATTTCATaGGCTGTGTGCTTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKFSSIS*AVCLVV
Trigger: GACCACCAAGCACACAGCCAATGAAATTGAGGAGAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGCCCCAGGGACACGTaGTGGAGTTTCCCATTGTCT +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCPRDT*WSFPLS
Trigger: AGACAATGGGAAACTCCACAACGTGTCCCTGGGGCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGAGCGCCGCATCTCATaGGTGAGGATGTTCATCCTC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFERRIS*VRMFIL
Trigger: GAGGATGAACATCCTCACCAATGAGATGCGGCGCTC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp AAAGAGATTCTCCTCCCCAAGATCGTCAAAGAATTTCTTGACAGATaGTATGGTGACCCTGTGCAGCGTCTCCTGGTCTTTCTCATCAAC +
Preference number: 5 (lower is better)
Translates to: KEILLPKIVKEFLDR*YGDPVQRLLVFLIN
Trigger: GTTGATGAGAAAGACCAGGAGACGCTGCACAGGGTCACCATAGCATCTGTCAAGAAATTCTTTGACGATCTTGGGGAGGAGAATCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCCCCACTTGTCTGCCTaGAACTTGAGGAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFPHLSA*NLRRTE
Trigger: TTCTGTCCTCCTCAAGTTCAAGGCAGACAAGTGGGG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTATCTCGATGATCTGGTaGCAGAACTCCCGGAGGATG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFISMIW*QNSRRM
Trigger: CATCCTCCGGGAGTTCTGCAACCAGATCATCGAGAT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCACTCAGCAAAGACCTaGACCAGTTCGAAGACCTCG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFHSAKT*TSSKTS
Trigger: CGAGGTCTTCGAACTGGTCAAGGTCTTTGCTGAGTG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAACAGGGCTTCCTTCTaGTTGTCCTTCCTTTCAAAC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKNRASF*LSFLSN
Trigger: GTTTGAAAGGAAGGACAACAAGAAGGAAGCCCTGTT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAAAGACCTCACGTCCTaGGCAAACTTCTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKKDLTS*ANFLQS
Trigger: TGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTTT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTACCTCGTCCTCATACTaGTGGAGGTTCAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFTSSSY*WRFSCS
Trigger: GCTACAGCTGAACCTCCACAAGTATGAGGACGAGGT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGTGGCTCCAGGTTCTTaGGACCTCAAACCAGATGGA +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFVAPGS*DLKPDG
Trigger: TCCATCTGGTTTGAGGTCCAAAGAACCTGGAGCCAC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGTCTTGTTGAGGGATTaGAGGACCTGCGATTTGCCG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFVLLRD*RTCDLP
Trigger: CGGCAAATCGCAGGTCCTCAAATCCCTCAACAAGAC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTACGTCCTTCAGCAGCTaGTTCAGTTGTGCCACATCC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFTSFSS*FSCATS
Trigger: GGATGTGGCACAACTGAACAAGCTGCTGAAGGACGT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCTGCAATCTTGTTTTaGATCCGGGACAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSAILF*IRDSFS
Trigger: GGAGAAACTGTCCCGGATCAAAAACAAGATTGCAGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGATTTTGGCCTCTaGGACCTTCTCCTCAATTTC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKCDFGL*DLLLNF
Trigger: GAAATTGAGGAGAAGGTCCAAGAGGCCAAAATCACA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTTACTTCTGTGATTTaGGCCTCTTGGACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKFTSVI*ASWTFS
Trigger: GGAGAAGGTCCAAGAGGCCAAAATCACAGAAGTAAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTCTGCAGGGCGGTCTaGTTCTTCCATTCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFFCRAV*FFHSLG
Trigger: CCCCAAAGAATGGAAGAACAAGACCGCCCTGCAGAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATTTGTGGAGTTTCCCATaGTCTATGGTAAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHLWSFP*SMVNPS
Trigger: ACTGGGATTTACCATAGACAATGGGAAACTCCACAA...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTGAACTCGATCTCCTaGGTGCACATCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLNSIS*VHISRV
Trigger: CACCCTGGAGATGTGCACCAAGGAGATCGAGTTCAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGCGAAGAGGATGCACTaGAACTCGATCTCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFAKRMH*NSISLV
Trigger: CACCAAGGAGATCGAGTTCAAGTGCATCCTCTTCGC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp CAGTTTGTTATAGAGATCCGGTTTGTTTGTGGCTTCCACCACGTTTaGTGTCTTCACAGCATCCTCCATCAAAGCTTTGAATTCCTGGTC +
Preference number: 5 (lower is better)
Translates to: QFVIEIRFVCGFHHV*CLHSILHQSFEFLV
Trigger: GACCAGGAATTCAAAGCTTTGATGGAGGATGCTGTGAAGACACCAAACGTGGTGGAAGCCACAAACAAACCGGATCTCTATAACAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 90 bp TCATCTTCAGGTTCTCCAGTTTGTTATAGAGATCCGGTTTGTTTGTaGCTTCCACCACGTTTGGTGTCTTCACAGCATCCTCCATCAAAG +
Preference number: 5 (lower is better)
Translates to: SSSGSPVCYRDPVCL*LPPRLVSSQHPPSK
Trigger: CTTTGATGGAGGATGCTGTGAAGACACCAAACGTGGTGGAAGCCACAAACAAACCGGATCTCTATAACAAACTGGAGAACCTGAAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGCTTCCTTCAGCCCTaGGGTGACATTCATGTAGAC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCFLQP*GDIHVD
Trigger: GTCTACATGAATGTCACCCAAGGGCTGAAGGAAGCA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTACAATGAGCTCCAGGTaGCCTACAAACTTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFTMSSR*PTNFRK
Trigger: CTTCCGGAAGTTTGTAGGCAACCTGGAGCTCATTGT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAGAGATCCGGTTTGTTaGTGGCTTCCACCACGTTTG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRDPVC*WLPPRL
Trigger: CAAACGTGGTGGAAGCCACAAACAAACCGGATCTCT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGGCCCGAATTGCATCTaGGACACACTTTACCTGTAC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFGPNCI*DTLYLY
Trigger: GTACAGGTAAAGTGTGTCCAAGATGCAATTCGGGCC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCGTCAAAGAATTTCTaGACAGATGCTATGGTGACC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSSKNF*TDAMVT
Trigger: GGTCACCATAGCATCTGTCAAGAAATTCTTTGACGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TGCAACTTTGAAGGCTTAGAAACCCAGAAAGTGATATCCTGCCCTACAGGGAGCTTGAGTTCTGCAATCTaGTTTTTGATCCGGGACAGT +
Preference number: 5 (lower is better)
Translates to: CNFEGLETQKVISCPTGSLSSAI*FLIRDS
Trigger: ACTGTCCCGGATCAAAAACAAGATTGCAGAACTCAA...GCTCCCTGTAGGGCAGGATATCACTTTCTGGGTTTCTAAGCCTTCAAAGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAATGCCGAGGTAAGGTaGCTCAGGTTGGCATTGAGT +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFNAEVR*LRLALS
Trigger: ACTCAATGCCAACCTGAGCAACCTTACCTCGGCATT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp TGTTATTACCAAGGATTGGAACAAGTTGCCTGGAGCCTGCTGGCTGTGCCACATAGATCACTGCCGTATTaGTTTTTGATCCACTTGATG +
Preference number: 5 (lower is better)
Translates to: CYYQGLEQVAWSLLAVPHRSLPY*FLIHLM
Trigger: CATCAAGTGGATCAAAAACAAATACGGCAGTGATCT...ATGTGGCACAGCCAGCAGGCTCCAGGCAACTTGTTCCAATCCTTGGTAATAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTGACCTGGAAGGTGACTaGAGCCAAGAAGATGAGCTT +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFDLEGD*SQEDEL
Trigger: AAGCTCATCTTCTTGGCTCAAGTCACCTTCCAGGTC...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATTGTGGAGTTTCCCATaGTCTATGGTAAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKLWSFP*SMVNPS
Trigger: ACTGGGATTTACCATAGACAATGGGAAACTCCACAA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAAAAGATCCAGCGCCTaGTGCAGGTTGGCATACATG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFKRSSA*CRLAYM
Trigger: CATGTATGCCAACCTGCACAAGGCGCTGGATCTTTT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTGTCTGCCTTGAACTaGAGGAGGACAGAAGACACT +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLSALN*RRTEDT
Trigger: AGTGTCTTCTGTCCTCCTCAAGTTCAAGGCAGACAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTAAGTGTGACAGGTACTaGGACATCATCAGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFKCDRY*DIIRFC
Trigger: GCAGAACCTGATGATGTCCAAGTACCTGTCACACTT...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATCCACGATGCTCTGTTaGATGATCTTCTCAAAATTC +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKSTMLC*MIFSKF
Trigger: GAATTTTGAGAAGATCATCAAACAGAGCATCGTGGA...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAACCCTGCGAGGGTAACTaGATTGTTTTAAATTCATTG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKPCEGN*IVLNSL
Trigger: CAATGAATTTAAAACAATCAAGTTACCCTCGCAGGG...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTCTCATCAACCATCTaGTCCCCATACACTCGCTCA +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFFSSTI*SPYTRS
Trigger: TGAGCGAGTGTATGGGGACAAGATGGTTGATGAGAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCTGCTCCATAGCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAAAGATCACTGCCGTATTaGTTTTTGATCCACTTGATG +
Preference number: 5 (lower is better)
Translates to: ACSIAQEHWVCKKSKVVKRSLPY*FLIHLM
Trigger: CATCAAGTGGATCAAAAACAAATACGGCAGTGATCT...TTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGCTATGGAGCAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 90 bp GTCAATATAGTTGACATAATCCTTCCAGGACTGGCTGGTTGTATCTaGTCTGAACAGTTCTGCATTTTCCACAACCATGGCTTGGATTCT +
Preference number: 5 (lower is better)
Translates to: VNIVDIILPGLAGCI*SEQFCIFHNHGLDS
Trigger: AGAATCCAAGCCATGGTTGTGGAAAATGCAGAACTGTTCAGAGCAGATACAACCAGCCAGTCCTGGAAGGATTATGTCAACTATATTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTGTGATTTTGGCCTCTaGGACCTTCTCCTCAATTTC +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFCDFGL*DLLLNF
Trigger: GAAATTGAGGAGAAGGTCCAAGAGGCCAAAATCACA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTTTCTTGGCCCGAATaGCATCTTGGACACACTTTA +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFFSWPE*HLGHTL
Trigger: TAAAGTGTGTCCAAGATGCAATTCGGGCCAAGAAAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
42% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTGAGTTCTGCAATCTaGTTTTTGATCCGGGACAGT +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLSSAI*FLIRDS
Trigger: ACTGTCCCGGATCAAAAACAAGATTGCAGAACTCAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTCGAGATGCTCTTTTGTaGCTTATTCAGGGACTTGTA +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFRDALL*LIQGLV
Trigger: TACAAGTCCCTGAATAAGCAACAAAAGAGCATCTCG...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS-3UTR CAA 90 bp GCCCAGGAGCACTGGGTTTGTAAGAAGTCAAAAGTGGTAAAATGTGTCTGTTTTTTAAACTTCTTTTTCTaGGCCCGAATTGCATCTTGG +
Preference number: 5 (lower is better)
Translates to: AQEHWVCKKSKVVKCVCFLNFFF*ARIASW
Trigger: CCAAGATGCAATTCGGGCCAAGAAAAAGAAGTTTAA...AAAACAGACACATTTTACCACTTTTGACTTCTTACAAACCCAGTGCTCCTGGGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp AGTGCCGGGCAAGCCGATTGTGCCCAGGCTACCCTCTaGGCCCAGGCTACCCTCAGGGACGGGGACAGCCCC +
Preference number: 6 (lower is better)
Translates to: SAGQADCAQATL*AQATLRDGDSP
Trigger: GGGGCTGTCCCCGTCCCTGAGGGTAGCCTGGGCTCAGAGGGTAGCCTGGGCACAATCGGCTTGCCCGGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106308.10
CDS CCA 72 bp GCAGCAGATCGGCATACCAAGCTGCCAGGCCCATCATaGAGGGGTAGGCCCGGGCCACCCAGGTGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: AADRHTKLPGPS*RGRPGPPRCQA
Trigger: TGCCTGACACCTGGGTGGCCCGGGCCTACCCCTCCATGATGGGCCTGGCAGCTTGGTATGCCGATCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp CACCTCCCCTTCCAGCATCTCCACGCGGATGTACTCTaGCAGGTAGGTCCTGCACAGCCGGCGGTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: HLPFQHLHADVL*QVGPAQPAVPV
Trigger: GACTGGGACCGCCGGCTGTGCAGGACCTACCTGGCAGAGTACATCCGCGTGGAGATGCTGGAAGGGGAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp AAGAGCCCCTTGAGGACGCTCACCGACAGGGAGATGTaGCCCAGGACCTCCTCGATCTCCCCCTGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: KSPLRTLTDREM*PRTSSISPCRP
Trigger: GGGCCTGCAGGGGGAGATCGAGGAGGTCCTGGGCAACATCTCCCTGTCGGTGAGCGTCCTCAAGGGGCTCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp AGCTGTTGCCAGTGGCGGTCACGGATGGCGGGGTTCTaGAGCTCGCTCACAGCACGCAGGGACGTGATCATG +
Preference number: 6 (lower is better)
Translates to: SCCQWRSRMAGF*SSLTARRDVIM
Trigger: CATGATCACGTCCCTGCGTGCTGTGAGCGAGCTGCAGAACCCCGCCATCCGTGACCGCCACTGGCAACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp TCTGGTGCAAGGCCAGGGCTGCAGTCACCAGGTGGCTaGTCAGCCGCTGGATCACCAGAGGGGCTGAACGAA +
Preference number: 6 (lower is better)
Translates to: SGARPGLQSPGG*SAAGSPEGLNE
Trigger: TTCGTTCAGCCCCTCTGGTGATCCAGCGGCTGAGCAGCCACCTGGTGACTGCAGCCCTGGCCTTGCACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp CTCCCTGATACGTTGCAGCAGATCGGCATACCAAGCTaGCAGGCCCATCATGGAGGGGTAGGCCCGGGCCAC +
Preference number: 6 (lower is better)
Translates to: LPDTLQQIGIPS*QAHHGGVGPGH
Trigger: GTGGCCCGGGCCTACCCCTCCATGATGGGCCTGGCAGCTTGGTATGCCGATCTGCTGCAACGTATCAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp CCTTCACCTGGAAACCAGTGCCGGGCAAGCCGATTGTaGCCAGGCTACCCTCTGAGCCCAGGCTACCCTCAG +
Preference number: 6 (lower is better)
Translates to: PSPGNQCRASRL*PGYPLSPGYPQ
Trigger: CTGAGGGTAGCCTGGGCTCAGAGGGTAGCCTGGGCACAATCGGCTTGCCCGGCACTGGTTTCCAGGTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106308.10
CDS CAA 72 bp CCAGCTTCCTTGACCGCAGCGTACCGCTTGTTCAGGTaGGCCACCCTGCCGTCCAGGTCCAACAGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: PASLTAAYRLFR*ATLPSRSNRAS
Trigger: GGAAGCCCTGTTGGACCTGGACGGCAGGGTGGCCAACCTGAACAAGCGGTACGCTGCGGTCAAGGAAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp CAGCCTTCACCTGGAAACCAGTGCCGGGCAAGCCGATaGTGCCCAGGCTACCCTCTGAGCCCAGGCTACCCT +
Preference number: 6 (lower is better)
Translates to: QPSPGNQCRASR*CPGYPLSPGYP
Trigger: AGGGTAGCCTGGGCTCAGAGGGTAGCCTGGGCACAATCGGCTTGCCCGGCACTGGTTTCCAGGTGAAGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106308.10
CDS TCA 72 bp GGTCGTCCACCTGAGAGGCCGTGCTCTGCAGCTTCATaGGGCCGTTCTCCAGCCGCTCAATCTTGGCGACCA +
Preference number: 6 (lower is better)
Translates to: GRPPERPCSAAS*GRSPAAQSWRP
Trigger: TGGTCGCCAAGATTGAGCGGCTGGAGAACGGCCTCATGAAGCTGCAGAGCACGGCCTCTCAGGTGGACGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp TCCTGCACGGCCAGCTTGGCCTTTAGGTCGTCCACCTaGGAGGCCGTGCTCTGCAGCTTCATGAGGCCGTTC +
Preference number: 6 (lower is better)
Translates to: SCTASLAFRSST*EAVLCSFMRPF
Trigger: GAACGGCCTCATGAAGCTGCAGAGCACGGCCTCTCAGGTGGACGACCTAAAGGCCAAGCTGGCCGTGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp GTGCCTGTGGTCCATGTGCTGGCGGATGAGGGTGTGTaGGGCCACCGTGCCATACTTGTCCACCTCTGGCAT +
Preference number: 6 (lower is better)
Translates to: VPVVHVLADEGV*GHRAILVHLWH
Trigger: ATGCCAGAGGTGGACAAGTATGGCACGGTGGCCCCACACACCCTCATCCGCCAGCACATGGACCACAGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp GCCAGGGCTGCAGTCACCAGGTGGCTGCTCAGCCGCTaGATCACCAGAGGGGCTGAACGAAACGACAAGTGT +
Preference number: 6 (lower is better)
Translates to: ARAAVTRWLLSR*ITRGAERNDKC
Trigger: ACACTTGTCGTTTCGTTCAGCCCCTCTGGTGATCCAGCGGCTGAGCAGCCACCTGGTGACTGCAGCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp ACTTTCTGGTGCAAGGCCAGGGCTGCAGTCACCAGGTaGCTGCTCAGCCGCTGGATCACCAGAGGGGCTGAA +
Preference number: 6 (lower is better)
Translates to: TFWCKARAAVTR*LLSRWITRGAE
Trigger: TTCAGCCCCTCTGGTGATCCAGCGGCTGAGCAGCCACCTGGTGACTGCAGCCCTGGCCTTGCACCAGAAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp CAGGGTGTCCAGGGCCTCTTGTGCTGCCAAGAGCGCTaGCTCGGCCTTGGCCAGGTCTGTTTCACAGGCTTT +
Preference number: 6 (lower is better)
Translates to: QGVQGLLCCQER*LGLGQVCFTGF
Trigger: AAAGCCTGTGAAACAGACCTGGCCAAGGCCGAGCCAGCGCTCTTGGCAGCACAAGAGGCCCTGGACACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TGGATGACCGTAATCTCGGGCACGGGGGTGATCCTCTaGAAGCCGATGCGCAGCTTGTCCAGGCACGTGGGC +
Preference number: 6 (lower is better)
Translates to: WMTVISGTGVIL*KPMRSLSRHVG
Trigger: GCCCACGTGCCTGGACAAGCTGCGCATCGGCTTCAAGAGGATCACCCCCGTGCCCGAGATTACGGTCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ATCTTGCCCCCAGGCGCTGTCAGGATCATGACAGCAGCTGTGACGTaGACCACAGCGTCTGGCGGGGATCCGAAGGACTTCAGCTCGGTC +
Preference number: 6 (lower is better)
Translates to: ILPPGAVRIMTAAVT*TTASGGDPKDFSSV
Trigger: GACCGAGCTGAAGTCCTTCGGATCCCCGCCAGACGCTGTGGTCAACGTCACAGCTGCTGTCATGATCCTGACAGCGCCTGGGGGCAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp CCACGTCGCAGTAGACCTCATAGAAGCGCACAATGTTaGTACACCAGGAGCACAGGCCTGCCGCGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: PRRSRPHRSAQC*YTRSTGLPRPW
Trigger: CCACGGCCGCGGCAGGCCTGTGCTCCTGGTGTATCAACATTGTGCGCTTCTATGAGGTCTACTGCGACGTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp ATGAGGCTGGTGAATGGGTCACGCTGGATGAGTGGCTaGCCCAGGTTGAAGTGGCAGTCCTGGTCCACACCC +
Preference number: 6 (lower is better)
Translates to: MRLVNGSRWMSG*PRLKWQSWSTP
Trigger: GGGTGTGGACCAGGACTGCCACTTCAACCTGGGGCAGCCACTCATCCAGCGTGACCCATTCACCAGCCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp CAGTGCTTCTTTTCCTCGTCCCAGCGGTGTCGAAGCTaGGACTGCCAGGTGAAGGCCTGCGAACTCTCCACG +
Preference number: 6 (lower is better)
Translates to: QCFFSSSQRCRS*DCQVKACELST
Trigger: CGTGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTGGGACGAGGAAAAGAAGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS GCA 72 bp ATGGCTGTGGGAAGGAACGTCGCTGAGACTTTCTGGTaGAAGGCCAGGGCTGCAGTCACCAGGTGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: MAVGRNVAETFW*KARAAVTRWLL
Trigger: GAGCAGCCACCTGGTGACTGCAGCCCTGGCCTTGCACCAGAAAGTCTCAGCGACGTTCCTTCCCACAGCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp CAGCGGTGTCGAAGCTGCGACTGCCAGGTGAAGGCCTaGGAACTCTCCACCTTAGCGGTGATCATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: QRCRSCDCQVKA*ELSTLAVIILA
Trigger: GGCCAAGATGATCACCGCTAAGGTGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS CCA 72 bp TCCGTGAGCAGGCACTCCAGCAGGTACAGGATGGTCTaGATGACCGTAATCTCGGGCACGGGGGTGATCCTC +
Preference number: 6 (lower is better)
Translates to: SVSRHSSRYRMV*MTVISGTGVIL
Trigger: GAGGATCACCCCCGTGCCCGAGATTACGGTCATCCAGACCATCCTGTACCTGCTGGAGTGCCTGCTCACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TTCAGGGTCAGTTTCTGCCGGTCATACCAGTGCCTGTaGTCCATGTGCTGGCGGATGAGGGTGTGTGGGGCC +
Preference number: 6 (lower is better)
Translates to: FRVSFCRSYQCL*SMCWRMRVCGA
Trigger: GGCCCCACACACCCTCATCCGCCAGCACATGGACCACAGGCACTGGTATGACCGGCAGAAACTGACCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ATGGCTTGGATTCTCACACCAGCTTCCTTGACCGCAGCGTACCGCTaGTTCAGGTTGGCCACCCTGCCGTCCAGGTCCAACAGGGCTTCC +
Preference number: 6 (lower is better)
Translates to: MAWILTPASLTAAYR*FRLATLPSRSNRAS
Trigger: GGAAGCCCTGTTGGACCTGGACGGCAGGGTGGCCAACCTGAACAAGCGGTACGCTGCGGTCAAGGAAGCTGGTGTGAGAATCCAAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp CTAGCGTCAAGGCGGAACTTGAGCTTACACAGGCTGTCGAAGAGCTaGGACAGGTGGCGGCTCACCTCCACGGGGTCGTTTCCGTTGGAG +
Preference number: 6 (lower is better)
Translates to: LASRRNLSLHRLSKS*DRWRLTSTGSFPLE
Trigger: CTCCAACGGAAACGACCCCGTGGAGGTGAGCCGCCACCTGTCCAAGCTCTTCGACAGCCTGTGTAAGCTCAAGTTCCGCCTTGACGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp AGGATGGTCTGGATGACCGTAATCTCGGGCACGGGGGTGATCCTCTaGAAGCCGATGCGCAGCTTGTCCAGGCACGTGGGCAGGTACTTG +
Preference number: 6 (lower is better)
Translates to: RMVWMTVISGTGVIL*KPMRSLSRHVGRYL
Trigger: CAAGTACCTGCCCACGTGCCTGGACAAGCTGCGCATCGGCTTCAAGAGGATCACCCCCGTGCCCGAGATTACGGTCATCCAGACCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp GCCTGTTTAGCTGCTCGTGGATGCACTGCAGGTTCATaGGCCGGGCGTCCCAGAACTCAAATTCCACCCGGG +
Preference number: 6 (lower is better)
Translates to: ACLAARGCTAGS*AGRPRTQIPPG
Trigger: CCCGGGTGGAATTTGAGTTCTGGGACGCCCGGCTCATGAACCTGCAGTGCATCCACGAGCAGCTAAACAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp TGGCACAGCAGAAGTCGTAGGCTTGGAAGAGCCCCTTaGGGACGCTCACCGACAGGGAGATGTTGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: WHSRSRRLGRAP*GRSPTGRCCPG
Trigger: TCCTGGGCAACATCTCCCTGTCGGTGAGCGTCCTCAAGGGGCTCTTCCAAGCCTACGACTTCTGCTGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp TTCTTTTCCTCGTCCCAGCGGTGTCGAAGCTGCGACTaGCAGGTGAAGGCCTGCGAACTCTCCACGGTGATC +
Preference number: 6 (lower is better)
Translates to: FFSSSQRCRSCD*QVKACELSTVI
Trigger: GATCACCGTGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTGGGACGAGGAAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS GCA 72 bp TTCTTTTCCTCGTCCCAGCGGTGTCGAAGCTGCGACTaGCAGGTGAAGGCCTGCGAACTCTCCACCTTAGCG +
Preference number: 6 (lower is better)
Translates to: FFSSSQRCRSCD*QVKACELSTLA
Trigger: CGCTAAGGTGGAGAGTTCGCAGGCCTTCACCTGGCAGTCGCAGCTTCGACACCGCTGGGACGAGGAAAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS CCA 72 bp CACTTGAGCTGCCCAGACACGGGAGACATGTTTTTGTaGATGGGCGGTATCTGGCCATCTGCAGAGGCCGCC +
Preference number: 6 (lower is better)
Translates to: HLSCPDTGDMFL*MGGIWPSAEAA
Trigger: GGCGGCCTCTGCAGATGGCCAGATACCGCCCATCCACAAAAACATGTCTCCCGTGTCTGGGCAGCTCAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TTGGATGAGGCTGGTGAATGGGTCACGCTGGATGAGTaGCTGCCCCAGGTTGAAGTGGCAGTCCTGGTCCAC +
Preference number: 6 (lower is better)
Translates to: LDEAGEWVTLDE*LPQVEVAVLVH
Trigger: GTGGACCAGGACTGCCACTTCAACCTGGGGCAGCCACTCATCCAGCGTGACCCATTCACCAGCCTCATCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TTGAGCTTACACAGGCTGTCGAAGAGCTTGGACAGGTaGCGGCTCACCTCCACGGGGTCGTTTCCGTTGGAG +
Preference number: 6 (lower is better)
Translates to: LSLHRLSKSLDR*RLTSTGSFPLE
Trigger: CTCCAACGGAAACGACCCCGTGGAGGTGAGCCGCCACCTGTCCAAGCTCTTCGACAGCCTGTGTAAGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp AAGTCACCACGGCTTCTGGAATTTCGTGGCGCAACGTaGCGCGCATTCGGTCCAGCACGCGATTCAGCCACA +
Preference number: 6 (lower is better)
Translates to: KSPRLLEFRGAT*RAFGPARDSAT
Trigger: TGTGGCTGAATCGCGTGCTGGACCGAATGCGCGCCACGTTGCGCCACGAAATTCCAGAAGCCGTGGTGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TCCTGGCCGGGGAAGCTCACAGCAAACACGCAGAAGTaGCGCTGTAGTCTGGGGTCAATGGTGAAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: SWPGKLTANTQK*RCSLGSMVKEP
Trigger: TGGCTCCTTCACCATTGACCCCAGACTACAGCGCCACTTCTGCGTGTTTGCTGTGAGCTTCCCCGGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TCTTCTGCTTCAGCTCAGTCTCCTGCACGGCCAGCTTaGCCTTTAGGTCGTCCACCTGAGAGGCCGTGCTCT +
Preference number: 6 (lower is better)
Translates to: SSASAQSPARPA*PLGRPPERPCS
Trigger: AGAGCACGGCCTCTCAGGTGGACGACCTAAAGGCCAAGCTGGCCGTGCAGGAGACTGAGCTGAAGCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp GAGCGAATGAACTCAGGGTCAAAGGTGGGGTTGCCTTaGTACGGCTTGAAGGCCTTTAGGCAGGCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: ERMNSGSKVGLP*YGLKAFRQASG
Trigger: CCCCGAGGCCTGCCTAAAGGCCTTCAAGCCGTACCAAGGCAACCCCACCTTTGACCCTGAGTTCATTCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp GAGATGAGCAGCACATCCCCACACAGGGTAACGCCCTaGCTCTTGAAGTTCTCCACCGACTCAGCCCAGCGT +
Preference number: 6 (lower is better)
Translates to: EMSSTSPHRVTP*LLKFSTDSAQR
Trigger: ACGCTGGGCTGAGTCGGTGGAGAACTTCAAGAGCCAGGGCGTTACCCTGTGTGGGGATGTGCTGCTCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp ACGCGCTGCTTCACCTCGTCGGCTGGCGCCGTCTTCTaGATGGCTTTCTCAAACACCACGTTGAAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: TRCFTSSAGAVF*MAFSNTTLKAL
Trigger: CAAGGCCTTCAACGTGGTGTTTGAGAAAGCCATCCAGAAGACGGCGCCAGCCGACGAGGTGAAGCAGCGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TGGCAGACTTGCACAGCGCCTCCATCACGCCCTCCATaGCCGAGATCTTATTCAGGGACTTGTAGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: WQTCTAPPSRPP*PRSYSGTCRAR
Trigger: CCGAGCCCTACAAGTCCCTGAATAAGATCTCGGCCATGGAGGGCGTGATGGAGGCGCTGTGCAAGTCTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106308.10
CDS CAA 72 bp GGGCGGCAGTCACACTGCAGCCAGCCATGGAAGACCTaGGTGTTCTCACAGCTGGACACCTCCTCATACAGC +
Preference number: 6 (lower is better)
Translates to: GRQSHCSQPWKT*VFSQLDTSSYS
Trigger: GCTGTATGAGGAGGTGTCCAGCTGTGAGAACACCAAGGTCTTCCATGGCTGGCTGCAGTGTGACTGCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GACAGGTGGCGGCTCACCTCCACGGGGTCGTTTCCGTaGGAGAGAATATCAAGCAGATCGGCGGAGGAGACA +
Preference number: 6 (lower is better)
Translates to: DRWRLTSTGSFP*ERISSRSAEET
Trigger: TGTCTCCTCCGCCGATCTGCTTGATATTCTCTCCAACGGAAACGACCCCGTGGAGGTGAGCCGCCACCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp AGGCGGAACTTGAGCTTACACAGGCTGTCGAAGAGCTaGGACAGGTGGCGGCTCACCTCCACGGGGTCGTTT +
Preference number: 6 (lower is better)
Translates to: RRNLSLHRLSKS*DRWRLTSTGSF
Trigger: AAACGACCCCGTGGAGGTGAGCCGCCACCTGTCCAAGCTCTTCGACAGCCTGTGTAAGCTCAAGTTCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp AGGTTGGCCACCCTGCCGTCCAGGTCCAACAGGGCTTCCTTCTTGTaGTCCTTCCTTTCAAACAGGGGGTTGGCTGACCACTCCTGCATG +
Preference number: 6 (lower is better)
Translates to: RLATLPSRSNRASFL*SFLSNRGLADHSCM
Trigger: CATGCAGGAGTGGTCAGCCAACCCCCTGTTTGAAAGGAAGGACAACAAGAAGGAAGCCCTGTTGGACCTGGACGGCAGGGTGGCCAACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TTCAGGTTGGCCACCCTGCCGTCCAGGTCCAACAGGGCTTCCTTCTaGTTGTCCTTCCTTTCAAACAGGGGGTTGGCTGACCACTCCTGC +
Preference number: 6 (lower is better)
Translates to: FRLATLPSRSNRASF*LSFLSNRGLADHSC
Trigger: GCAGGAGTGGTCAGCCAACCCCCTGTTTGAAAGGAAGGACAACAAGAAGGAAGCCCTGTTGGACCTGGACGGCAGGGTGGCCAACCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ATTCTCACACCAGCTTCCTTGACCGCAGCGTACCGCTTGTTCAGGTaGGCCACCCTGCCGTCCAGGTCCAACAGGGCTTCCTTCTTGTTG +
Preference number: 6 (lower is better)
Translates to: ILTPASLTAAYRLFR*ATLPSRSNRASFLL
Trigger: CAACAAGAAGGAAGCCCTGTTGGACCTGGACGGCAGGGTGGCCAACCTGAACAAGCGGTACGCTGCGGTCAAGGAAGCTGGTGTGAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp CCCAGCCCAAACTTGAGTGGCTTTCCACTAGCGTCAAGGCGGAACTaGAGCTTACACAGGCTGTCGAAGAGCTTGGACAGGTGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: PSPNLSGFPLASRRN*SLHRLSKSLDRWRL
Trigger: GAGCCGCCACCTGTCCAAGCTCTTCGACAGCCTGTGTAAGCTCAAGTTCCGCCTTGACGCTAGTGGAAAGCCACTCAAGTTTGGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GCCGAGATGAGCAGCACATCCCCACACAGGGTAACGCCCTGGCTCTaGAAGTTCTCCACCGACTCAGCCCAGCGTACATTTTCTGAAGCC +
Preference number: 6 (lower is better)
Translates to: AEMSSTSPHRVTPWL*KFSTDSAQRTFSEA
Trigger: GGCTTCAGAAAATGTACGCTGGGCTGAGTCGGTGGAGAACTTCAAGAGCCAGGGCGTTACCCTGTGTGGGGATGTGCTGCTCATCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp CAGCTCTGGTGCTGCAGGAAGTCCACAGGTGACACCACGCCTGCCTaGAAGGGGAACCGCAAGAGAAAGTCTAGTTCCACCGGATTCAGC +
Preference number: 6 (lower is better)
Translates to: QLWCCRKSTGDTTPA*KGNRKRKSSSTGFS
Trigger: GCTGAATCCGGTGGAACTAGACTTTCTCTTGCGGTTCCCCTTCAAGGCAGGCGTGGTGTCACCTGTGGACTTCCTGCAGCACCAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TCCGGCCTCATGCAGCGCACCATGCACAGCTTCTGCAGGGCGGTCTaGTTCTTCCATTCTTTGGGGAAGATCTCTTTCTCGGGCGCTTCC +
Preference number: 6 (lower is better)
Translates to: SGLMQRTMHSFCRAV*FFHSLGKISFSGAS
Trigger: GGAAGCGCCCGAGAAAGAGATCTTCCCCAAAGAATGGAAGAACAAGACCGCCCTGCAGAAGCTGTGCATGGTGCGCTGCATGAGGCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp CCACAACCATGGCTTGGATTCTCACACCAGCTTCCTTaGCCGCAGCGTACCGCTTGTTCAGGTTGGCCACCC +
Preference number: 6 (lower is better)
Translates to: PQPWLGFSHQLP*PQRTACSGWPP
Trigger: GGGTGGCCAACCTGAACAAGCGGTACGCTGCGGTCAAGGAAGCTGGTGTGAGAATCCAAGCCATGGTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp CTTTCTCTGACTGCACCTTGCGCCTCTCAATCCAGCTaGTCACAACCGGGTTCCACCCTAGATCCGCAGGGT +
Preference number: 6 (lower is better)
Translates to: LSLTAPCASQSS*SQPGSTLDPQG
Trigger: ACCCTGCGGATCTAGGGTGGAACCCGGTTGTGAGCAGCTGGATTGAGAGGCGCAAGGTGCAGTCAGAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp ACGTCCTTCAGGGTCAGTTTCTGCCGGTCATACCAGTaGCTGTGGTCCATGTGCTGGCGGATGAGGGTGTGT +
Preference number: 6 (lower is better)
Translates to: TSFRVSFCRSYQ*LWSMCWRMRVC
Trigger: ACACACCCTCATCCGCCAGCACATGGACCACAGGCACTGGTATGACCGGCAGAAACTGACCCTGAAGGACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp GAAGCGCACAATGTTGATACACCAGGAGCACAGGCCTaGCGCGGCCGTGGACTTAGAGCGAATGAACTCAGG +
Preference number: 6 (lower is better)
Translates to: EAHNVDTPGAQA*RGRGLRANELR
Trigger: CCTGAGTTCATTCGCTCTAAGTCCACGGCCGCGGCAGGCCTGTGCTCCTGGTGTATCAACATTGTGCGCTTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp ATGGGCGGTATCTGGCCATCTGCAGAGGCCGCCATCTaGGCATCGTACATGAGTTTGGCGTTGTCAAGCTCC +
Preference number: 6 (lower is better)
Translates to: MGGIWPSAEAAI*ASYMSLALSSS
Trigger: GGAGCTTGACAACGCCAAACTCATGTACGATGCCCAGATGGCGGCCTCTGCAGATGGCCAGATACCGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp GACACGGGAGACATGTTTTTGTGGATGGGCGGTATCTaGCCATCTGCAGAGGCCGCCATCTGGGCATCGTAC +
Preference number: 6 (lower is better)
Translates to: DTGDMFLWMGGI*PSAEAAIWASY
Trigger: GTACGATGCCCAGATGGCGGCCTCTGCAGATGGCCAGATACCGCCCATCCACAAAAACATGTCTCCCGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp CGAGTCAATCTGCTGCTGGAACTGAGCCAGGGTAGGTaGTGTCTTGGGGATGGTGTCGTCCGTCTTGGTGTC +
Preference number: 6 (lower is better)
Translates to: RVNLLLELSQGR*CLGDGVVRLGV
Trigger: GACACCAAGACGGACGACACCATCCCCAAGACACCACCTACCCTGGCTCAGTTCCAGCAGCAGATTGACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp GGCGGCAGTCACACTGCAGCCAGCCATGGAAGACCTTaGTGTTCTCACAGCTGGACACCTCCTCATACAGCT +
Preference number: 6 (lower is better)
Translates to: GGSHTAASHGRP*CSHSWTPPHTA
Trigger: AGCTGTATGAGGAGGTGTCCAGCTGTGAGAACACCAAGGTCTTCCATGGCTGGCTGCAGTGTGACTGCCGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp ACAGGTGGCGGCTCACCTCCACGGGGTCGTTTCCGTTaGAGAGAATATCAAGCAGATCGGCGGAGGAGACAA +
Preference number: 6 (lower is better)
Translates to: TGGGSPPRGRFR*REYQADRRRRQ
Trigger: TTGTCTCCTCCGCCGATCTGCTTGATATTCTCTCCAACGGAAACGACCCCGTGGAGGTGAGCCGCCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TTCCCTCGGTTTCTCCTCGTAAGTCACCACGGCTTCTaGAATTTCGTGGCGCAACGTGGCGCGCATTCGGTC +
Preference number: 6 (lower is better)
Translates to: FPRFLLVSHHGF*NFVAQRGAHSV
Trigger: GACCGAATGCGCGCCACGTTGCGCCACGAAATTCCAGAAGCCGTGGTGACTTACGAGGAGAAACCGAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TTAATGGCTGTGGGAAGGAACGTCGCTGAGACTTTCTaGTGCAAGGCCAGGGCTGCAGTCACCAGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: LMAVGRNVAETF*CKARAAVTRWL
Trigger: CAGCCACCTGGTGACTGCAGCCCTGGCCTTGCACCAGAAAGTCTCAGCGACGTTCCTTCCCACAGCCATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp ATCTTCTCCAGGATGTCATCCAGCACAGCCTTCACCTaGAAACCAGTGCCGGGCAAGCCGATTGTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: IFSRMSSSTAFT*KPVPGKPIVPR
Trigger: CCTGGGCACAATCGGCTTGCCCGGCACTGGTTTCCAGGTGAAGGCTGTGCTGGATGACATCCTGGAGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106308.10
CDS CAA 72 bp AAACTCCAGCGCTTGATGGTGTTGAGCAAGGTCTGCTaGAAGGGGCGGCAGTCACACTGCAGCCAGCCATGG +
Preference number: 6 (lower is better)
Translates to: KLQRLMVLSKVC*KGRQSHCSQPW
Trigger: CCATGGCTGGCTGCAGTGTGACTGCCGCCCCTTCAAGCAGACCTTGCTCAACACCATCAAGCGCTGGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GCCCGCGTTCCCAATGACGAAGACCGAGTGTCGGACTaGAAGCAGCTCTTCCAGCTGGACGACTTTCAGCAC +
Preference number: 6 (lower is better)
Translates to: ARVPNDEDRVSD*KQLFQLDDFQH
Trigger: GTGCTGAAAGTCGTCCAGCTGGAAGAGCTGCTTCAAGTCCGACACTCGGTCTTCGTCATTGGGAACGCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TGTCAGCGCCACCTGGGCCGGGTAGTCAAAGATCCATaGTTCCCTCGGTTTCTCCTCGTAAGTCACCACGGC +
Preference number: 6 (lower is better)
Translates to: CQRHLGRVVKDP*FPRFLLVSHHG
Trigger: GCCGTGGTGACTTACGAGGAGAAACCGAGGGAACAATGGATCTTTGACTACCCGGCCCAGGTGGCGCTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS CAA 90 bp TCTGCATTTTCCACAACCATGGCTTGGATTCTCACACCAGCTTCCTaGACCGCAGCGTACCGCTTGTTCAGGTTGGCCACCCTGCCGTCC +
Preference number: 6 (lower is better)
Translates to: SAFSTTMAWILTPAS*TAAYRLFRLATLPS
Trigger: GGACGGCAGGGTGGCCAACCTGAACAAGCGGTACGCTGCGGTCAAGGAAGCTGGTGTGAGAATCCAAGCCATGGTTGTGGAAAATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ATGGTGACCCTGTGCAGCGTCTCCTGGTCTTTCTCATCAACCATCTaGTCCCCATACACTCGCTCAGCCTCATGCAGCCAAAGGCGGACG +
Preference number: 6 (lower is better)
Translates to: MVTLCSVSWSFSSTI*SPYTRSASCSQRRT
Trigger: CGTCCGCCTTTGGCTGCATGAGGCTGAGCGAGTGTATGGGGACAAGATGGTTGATGAGAAAGACCAGGAGACGCTGCACAGGGTCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GAGTCCGTCATCAGGAACACCGAGGGCACGTTCTTCACCGCAGACTaGATGTACTGGGTAGCCAGGTCCATCTTGAGGTCTGGGATTGCG +
Preference number: 6 (lower is better)
Translates to: ESVIRNTEGTFFTAD*MYWVARSILRSGIA
Trigger: CGCAATCCCAGACCTCAAGATGGACCTGGCTACCCAGTACATCAAGTCTGCGGTGAAGAACGTGCCCTCGGTGTTCCTGATGACGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp AGGGTGTCCAGGGCCTCTTGTGCTGCCAAGAGCGCTGGCTCGGCCTaGGCCAGGTCTGTTTCACAGGCTTTCTGTTTCTCAGTAACATTC +
Preference number: 6 (lower is better)
Translates to: RVSRASCAAKSAGSA*ARSVSQAFCFSVTF
Trigger: GAATGTTACTGAGAAACAGAAAGCCTGTGAAACAGACCTGGCCAAGGCCGAGCCAGCGCTCTTGGCAGCACAAGAGGCCCTGGACACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp CTGCGTGCATGTCAGCGCCACCTGGGCCGGGTAGTCAAAGATCCATaGTTCCCTCGGTTTCTCCTCGTAAGTCACCACGGCTTCTGGAAT +
Preference number: 6 (lower is better)
Translates to: LRACQRHLGRVVKDP*FPRFLLVSHHGFWN
Trigger: ATTCCAGAAGCCGTGGTGACTTACGAGGAGAAACCGAGGGAACAATGGATCTTTGACTACCCGGCCCAGGTGGCGCTGACATGCACGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS TCA 72 bp ACACCTCAAGCCTCTCCTGCAGCTCCAGGCTCCACTTaGGCTGCCCAGACACGGGAGACATGTTTTTGTGGA +
Preference number: 6 (lower is better)
Translates to: TPQASPAAPGST*AAQTRETCFCG
Trigger: TCCACAAAAACATGTCTCCCGTGTCTGGGCAGCTCAAGTGGAGCCTGGAGCTGCAGGAGAGGCTTGAGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp CCCGCGTTCCCAATGACGAAGACCGAGTGTCGGACTTaGAGCAGCTCTTCCAGCTGGACGACTTTCAGCACA +
Preference number: 6 (lower is better)
Translates to: PAFPMTKTECRT*SSSSSWTTFST
Trigger: TGTGCTGAAAGTCGTCCAGCTGGAAGAGCTGCTTCAAGTCCGACACTCGGTCTTCGTCATTGGGAACGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp ACAAGTGTTGTGCCAGGATCGTGTTGTAGATGGAGGTaGGGGCCTCCTGGCCGGGGAAGCTCACAGCAAACA +
Preference number: 6 (lower is better)
Translates to: TSVVPGSCCRWR*GPPGRGSSQQT
Trigger: TGTTTGCTGTGAGCTTCCCCGGCCAGGAGGCCCTCACCTCCATCTACAACACGATCCTGGCACAACACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp TGCACTGGGCCTGCATCTCGGGCTTGTAGTGCGGGTTaGAGTACTTGGTGTGTAGGATCAGGCGGAAACTGG +
Preference number: 6 (lower is better)
Translates to: CTGPASRACSAG*STWCVGSGGNW
Trigger: CCAGTTTCCGCCTGATCCTACACACCAAGTACTTCAACCCGCACTACAAGCCCGAGATGCAGGCCCAGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp TTCTTGTCCAGGATACCCAGCCATCTCGCCACCAGGTaGATGTTCTGTGGCAAGGAGCCCCTCACCTGCAGA +
Preference number: 6 (lower is better)
Translates to: FLSRIPSHLATR*MFCGKEPLTCR
Trigger: TCTGCAGGTGAGGGGCTCCTTGCCACAGAACATTCACCTGGTGGCGAGATGGCTGGGTATCCTGGACAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS GCA 72 bp TGCTTCAGGGGCTCAAACATGCTATCGGTGGCCACCTaGCTCTCCTTGACTTTCATCAGGTGCCCCATGACC +
Preference number: 6 (lower is better)
Translates to: CFRGSNMLSVAT*LSLTFIRCPMT
Trigger: GGTCATGGGGCACCTGATGAAAGTCAAGGAGAGGCAGGTGGCCACCGATAGCATGTTTGAGCCCCTGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp ACTATCTTGTTCACCTTGGGCCTGTTTAGCTGCTCGTaGATGCACTGCAGGTTCATGAGCCGGGCGTCCCAG +
Preference number: 6 (lower is better)
Translates to: TILFTLGLFSCS*MHCRFMSRASQ
Trigger: CTGGGACGCCCGGCTCATGAACCTGCAGTGCATCCACGAGCAGCTAAACAGGCCCAAGGTGAACAAGATAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp AAGTTGACTTGGATGAGGCTGGTGAATGGGTCACGCTaGATGAGTGGCTGCCCCAGGTTGAAGTGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: KLTWMRLVNGSR*MSGCPRLKWQS
Trigger: GGACTGCCACTTCAACCTGGGGCAGCCACTCATCCAGCGTGACCCATTCACCAGCCTCATCCAAGTCAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp CGACAGGAAGCCAGCCTCGTCGCCCATCTCCAGAGATaGGTTGTAGGTCAGACCGTCTTTATCCAGCTCCAT +
Preference number: 6 (lower is better)
Translates to: RQEASLVAHLQR*VVGQTVFIQLH
Trigger: ATGGAGCTGGATAAAGACGGTCTGACCTACAACCCATCTCTGGAGATGGGCGACGAGGCTGGCTTCCTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp ACCGAGGGCACGTTCTTCACCGCAGACTTGATGTACTaGGTAGCCAGGTCCATCTTGAGGTCTGGGATTGCG +
Preference number: 6 (lower is better)
Translates to: TEGTFFTADLMY*VARSILRSGIA
Trigger: CGCAATCCCAGACCTCAAGATGGACCTGGCTACCCAGTACATCAAGTCTGCGGTGAAGAACGTGCCCTCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp CGTCAGATTTATCACGCGCTGCTTCACCTCGTCGGCTaGCGCCGTCTTCTGGATGGCTTTCTCAAACACCAC +
Preference number: 6 (lower is better)
Translates to: RQIYHALLHLVG*RRLLDGFLKHH
Trigger: GTGGTGTTTGAGAAAGCCATCCAGAAGACGGCGCCAGCCGACGAGGTGAAGCAGCGCGTGATAAATCTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp ATCGATGTATTCGTGGTAGCCCTTATAGTCCAGGTTTaGGGGGATCTGAAACCCGGGGGCCAGCAGCACCTC +
Preference number: 6 (lower is better)
Translates to: IDVFVVALIVQV*GDLKPGGQQHL
Trigger: GAGGTGCTGCTGGCCCCCGGGTTTCAGATCCCCCCAAACCTGGACTATAAGGGCTACCACGAATACATCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TCCACAACCATGGCTTGGATTCTCACACCAGCTTCCTaGACCGCAGCGTACCGCTTGTTCAGGTTGGCCACC +
Preference number: 6 (lower is better)
Translates to: STTMAWILTPAS*TAAYRLFRLAT
Trigger: GGTGGCCAACCTGAACAAGCGGTACGCTGCGGTCAAGGAAGCTGGTGTGAGAATCCAAGCCATGGTTGTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GGCTCAAACATGCTATCGGTGGCCACCTGCCTCTCCTaGACTTTCATCAGGTGCCCCATGACCTCTACCAGC +
Preference number: 6 (lower is better)
Translates to: GSNMLSVATCLS*TFIRCPMTSTS
Trigger: GCTGGTAGAGGTCATGGGGCACCTGATGAAAGTCAAGGAGAGGCAGGTGGCCACCGATAGCATGTTTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp CGTCCACCAGATCTGGGCCGGGTAGTCAAAGATCCATaGTTCCCTCGGTTTCTCCTCGTAAGTCACCACGGC +
Preference number: 6 (lower is better)
Translates to: RPPDLGRVVKDP*FPRFLLVSHHG
Trigger: GCCGTGGTGACTTACGAGGAGAAACCGAGGGAACAATGGATCTTTGACTACCCGGCCCAGATCTGGTGGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
CDS CAA 72 bp ACCAGCCTCATGGTGCGATTCAAGGGAATTCGCTCGTaGCTGGCCAGGGTGAGGACCTTGTTGTCGTCCATG +
Preference number: 6 (lower is better)
Translates to: TSLMVRFKGIRS*LARVRTLLSSM
Trigger: CATGGACGACAACAAGGTCCTCACCCTGGCCAGCAACGAGCGAATTCCCTTGAATCGCACCATGAGGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp AGCAGCACATCCCCACACAGGGTAACGCCCTGGCTCTaGAAGTTCTCCACCGACTCAGCCCAGCGTACATTT +
Preference number: 6 (lower is better)
Translates to: SSTSPHRVTPWL*KFSTDSAQRTF
Trigger: AAATGTACGCTGGGCTGAGTCGGTGGAGAACTTCAAGAGCCAGGGCGTTACCCTGTGTGGGGATGTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TGCTGCAGGAAGTCCACAGGTGACACCACGCCTGCCTaGAAGGGGAACCGCAAGAGAAAGTCTAGTTCCACC +
Preference number: 6 (lower is better)
Translates to: CCRKSTGDTTPA*KGNRKRKSSST
Trigger: GGTGGAACTAGACTTTCTCTTGCGGTTCCCCTTCAAGGCAGGCGTGGTGTCACCTGTGGACTTCCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TCGGGCGCTTCCGACTCCACCAGCTTTTTCCACCTCTaGGCCGAGCCCTCAATGTCACTGTCCAAGTTCTTG +
Preference number: 6 (lower is better)
Translates to: SGASDSTSFFHL*AEPSMSLSKFL
Trigger: CAAGAACTTGGACAGTGACATTGAGGGCTCGGCCAAGAGGTGGAAAAAGCTGGTGGAGTCGGAAGCGCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GGATTAGGGGTCGTTCCAGGAGGCCCCCACACATGTACAGGAGCTTaGCGGAAGACTCCATACAGTTGCAGTCGTCAAAGGCTTGGCAGA +
Preference number: 6 (lower is better)
Translates to: GLGVVPGGPHTCTGA*RKTPYSCSRQRLGR
Trigger: TCTGCCAAGCCTTTGACGACTGCAACTGTATGGAGTCTTCCGCAAAGCTCCTGTACATGTGTGGGGGCCTCCTGGAACGACCCCTAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GCTGACCACTCCTGCATGGCCTGGGTGATCCCTTCTACGTTTTGCTaGGCTTTCTGGATCCGGTTCTGCAGGTTGTATAGCATCTCCCGC +
Preference number: 6 (lower is better)
Translates to: ADHSCMAWVIPSTFC*AFWIRFCRLYSISR
Trigger: GCGGGAGATGCTATACAACCTGCAGAACCGGATCCAGAAAGCCAAGCAAAACGTAGAAGGGATCACCCAGGCCATGCAGGAGTGGTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp AGCTCGCTCACAGCACGCAGGGACGTGATCATGTTTTTCACGGTGTaGTCCAGTCCCACGAAGGCATCCCAGGGTTTCATCTCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: SSLTARRDVIMFFTV*SSPTKASQGFISLS
Trigger: GGACAAGGAGATGAAACCCTGGGATGCCTTCGTGGGACTGGACAACACCGTGAAAAACATGATCACGTCCCTGCGTGCTGTGAGCGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TTCTGCTGCCAGCTGGTCACCTCCTTCAGGAAGTGTGACAGGTACTaGGACATCATCAGGTTCTGCAGCTGCACCTGGTTGTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: FCCQLVTSFRKCDRY*DIIRFCSCTWLSSS
Trigger: GCTGGAGGACAACCAGGTGCAGCTGCAGAACCTGATGATGTCCAAGTACCTGTCACACTTCCTGAAGGAGGTGACCAGCTGGCAGCAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TTTTTCCACCTCTTGGCCGAGCCCTCAATGTCACTGTCCAAGTTCTaGAACTCATCCATCTCCGACAGGGCCTTGATCCCGCCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: FFHLLAEPSMSLSKF*NSSISDRALIPPQL
Trigger: GAGCTGGGGCGGGATCAAGGCCCTGTCGGAGATGGATGAGTTCAAGAACTTGGACAGTGACATTGAGGGCTCGGCCAAGAGGTGGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp GTTCTTCAGCCTGTGGACCTGCTTCACAATGTCTTCTaGCACCACCCGGGGCCAGCCATCCATGTTCTCACT +
Preference number: 6 (lower is better)
Translates to: VLQPVDLLHNVF*HHPGPAIHVLT
Trigger: AGTGAGAACATGGATGGCTGGCCCCGGGTGGTGTCAGAAGACATTGTGAAGCAGGTCCACAGGCTGAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp TGTCCTCCAGCGTCTCCACCAGCACTTCGTCAGACTTaGGCATCATGGTGCCTGTCCGTGGATGTAACTCGT +
Preference number: 6 (lower is better)
Translates to: CPPASPPALRQT*ASWCLSVDVTR
Trigger: ACGAGTTACATCCACGGACAGGCACCATGATGCTCAAGTCTGACGAAGTGCTGGTGGAGACGCTGGAGGACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp CAGCTCACCCTTCAGTCCCAGGTTCAGCTCCTTCAGTaGGCGCCGCATCTCATTGGTGAGGATGTTCATCCT +
Preference number: 6 (lower is better)
Translates to: QLTLQSQVQLLQ*APHLIGEDVHP
Trigger: AGGATGAACATCCTCACCAATGAGATGCGGCGCTCACTGAAGGAGCTGAACCTGGGACTGAAGGGTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp GTTGCTTATTCAGGGACTTGTAGGGCTCGGGGTCACTaGAGGAGAAGGGGGCATCACGTCGGAACTTCTCTC +
Preference number: 6 (lower is better)
Translates to: VAYSGTCRARGH*RRRGHHVGTSL
Trigger: GAGAGAAGTTCCGACGTGATGCCCCCTTCTCCTTCAGTGACCCCGAGCCCTACAAGTCCCTGAATAAGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS GCA 72 bp CCCATCACAAACATCTCGTTCTTCAGCCTGTGGACCTaGTTCACAATGTCTTCTGACACCACCCGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: PITNISFFSLWT*FTMSSDTTRGQ
Trigger: CTGGCCCCGGGTGGTGTCAGAAGACATTGTGAAGCAGGTCCACAGGCTGAAGAACGAGATGTTTGTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp TTCACCTTGGGCCTGTTTAGCTGCTCGTGGATGCACTaGAGGTTCATGAGCCGGGCGTCCCAGAACTCAAAT +
Preference number: 6 (lower is better)
Translates to: FTLGLFSCSWMH*RFMSRASQNSN
Trigger: ATTTGAGTTCTGGGACGCCCGGCTCATGAACCTGCAGTGCATCCACGAGCAGCTAAACAGGCCCAAGGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp TCGTTCCAGGAGGCCCCCACACATGTACAGGAGCTTTaGGGAAGACTCCATACAGTTGCAGTCGTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: SFQEAPTHVQEL*GRLHTVAVVKG
Trigger: GCCTTTGACGACTGCAACTGTATGGAGTCTTCCGCAAAGCTCCTGTACATGTGTGGGGGCCTCCTGGAACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp ATTCGGTCCAGCACGCGATTCAGCCACACTTCCACCTaGCCGGAGAGGTCACACTCCTTATCAAAGTCCACA +
Preference number: 6 (lower is better)
Translates to: IRSSTRFSHTST*PERSHSLSKST
Trigger: TGTGGACTTTGATAAGGAGTGTGACCTCTCCGGGCAGGTGGAAGTGTGGCTGAATCGCGTGCTGGACCGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp AACTCGATCTCCTTGGTGCACATCTCCAGGGTGTCCTaGGTGAAAAGATCCAGCGCCTTGTGCAGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: NSISLVHISRVS*VKRSSALCRLA
Trigger: TGCCAACCTGCACAAGGCGCTGGATCTTTTCACGCAGGACACCCTGGAGATGTGCACCAAGGAGATCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp AAGTCTGTGGTCCAGGATTCAAGCTCCCTGATACGTTaGAGCAGATCGGCATACCAAGCTGCCAGGCCCATC +
Preference number: 6 (lower is better)
Translates to: KSVVQDSSSLIR*SRSAYQAARPI
Trigger: GATGGGCCTGGCAGCTTGGTATGCCGATCTGCTGCAACGTATCAGGGAGCTTGAATCCTGGACCACAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp TGCACAGCGCCTCCATCACGCCCTCCATGGCCGAGATaGTCTTTTGTTGCTTATTCAGGGACTTGTAGGGCT +
Preference number: 6 (lower is better)
Translates to: CTAPPSRPPWPR*SFVAYSGTCRA
Trigger: AGCCCTACAAGTCCCTGAATAAGCAACAAAAGAGCATCTCGGCCATGGAGGGCGTGATGGAGGCGCTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS CCA 72 bp CTCGGGGAGGAGCGGTCATGTCCTCCCGATTCTTCTTaGTCACTTCCACAGACAGACACATCTTATCCAGGG +
Preference number: 6 (lower is better)
Translates to: LGEERSCPPDSS*SLPQTDTSYPG
Trigger: CCCTGGATAAGATGTGTCTGTCTGTGGAAGTGACCAAGAAGAATCGGGAGGACATGACCGCTCCTCCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TGGCAGACTTGCACAGCGCCTCCATCACGCCCTCCATaGCCGAGATGCTCTTTTGTTGCTTATTCAGGGACT +
Preference number: 6 (lower is better)
Translates to: WQTCTAPPSRPP*PRCSFVAYSGT
Trigger: AGTCCCTGAATAAGCAACAAAAGAGCATCTCGGCCATGGAGGGCGTGATGGAGGCGCTGTGCAAGTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000132685.9
CDS CAA 72 bp GAAAAGCTTCATGTTGGCACAGCAGAAGTCGTAGGCTaGGAAGAGCCCCTTGAGGACGCTCACCGACAGGGA +
Preference number: 6 (lower is better)
Translates to: EKLHVGTAEVVG*EEPLEDAHRQG
Trigger: TCCCTGTCGGTGAGCGTCCTCAAGGGGCTCTTCCAAGCCTACGACTTCTGCTGTGCCAACATGAAGCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GTCGTTCCAGGAGGCCCCCACACATGTACAGGAGCTTaGCGGAAGACTCCATACAGTTGCAGTCGTCAAAGG +
Preference number: 6 (lower is better)
Translates to: VVPGGPHTCTGA*RKTPYSCSRQR
Trigger: CCTTTGACGACTGCAACTGTATGGAGTCTTCCGCAAAGCTCCTGTACATGTGTGGGGGCCTCCTGGAACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GCTTCCTTCTTGTTGTCCTTCCTTTCAAACAGGGGGTaGGCTGACCACTCCTGCATGGCCTGGGTGATCCCT +
Preference number: 6 (lower is better)
Translates to: ASFLLSFLSNRG*ADHSCMAWVIP
Trigger: AGGGATCACCCAGGCCATGCAGGAGTGGTCAGCCAACCCCCTGTTTGAAAGGAAGGACAACAAGAAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TTGTCCTCCAGCGTCTCCACCAGCACTTCGTCAGACTaGAGCATCATGGTGCCTGTCCGTGGATGTAACTCG +
Preference number: 6 (lower is better)
Translates to: LSSSVSTSTSSD*SIMVPVRGCNS
Trigger: CGAGTTACATCCACGGACAGGCACCATGATGCTCAAGTCTGACGAAGTGCTGGTGGAGACGCTGGAGGACAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GTAACTGTCCAGGACGTCCTTCAGCAGCTTGTTCAGTaGTGCCACATCCGTGACGGGGAAGTACTTGGGGTC +
Preference number: 6 (lower is better)
Translates to: VTVQDVLQQLVQ*CHIRDGEVLGV
Trigger: GACCCCAAGTACTTCCCCGTCACGGATGTGGCACAACTGAACAAGCTGCTGAAGGACGTCCTGGACAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GACTTAGAGCGAATGAACTCAGGGTCAAAGGTGGGGTaGCCTTGGTACGGCTTGAAGGCCTTTAGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: DLERMNSGSKVG*PWYGLKAFRQA
Trigger: GGCCTGCCTAAAGGCCTTCAAGCCGTACCAAGGCAACCCCACCTTTGACCCTGAGTTCATTCGCTCTAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ATCTGGCCATCTGCAGAGGCCGCCATCTGGGCATCGTACATGAGTTaGGCGTTGTCAAGCTCCGTATTGAACATCTCCAGCATGACCGAG +
Preference number: 6 (lower is better)
Translates to: IWPSAEAAIWASYMS*ALSSSVLNISSMTE
Trigger: CTCGGTCATGCTGGAGATGTTCAATACGGAGCTTGACAACGCCAAACTCATGTACGATGCCCAGATGGCGGCCTCTGCAGATGGCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TTGAACAGAAAACTCCAGCGCTTGATGGTGTTGAGCAAGGTCTGCTaGAAGGGGCGGCAGTCACACTGCAGCCAGCCATGGAAGACCTTG +
Preference number: 6 (lower is better)
Translates to: LNRKLQRLMVLSKVC*KGRQSHCSQPWKTL
Trigger: CAAGGTCTTCCATGGCTGGCTGCAGTGTGACTGCCGCCCCTTCAAGCAGACCTTGCTCAACACCATCAAGCGCTGGAGTTTTCTGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TCCAGGGTCTTCAGCACCTTCTCCATCCCGGACTCCTTTACGGCCTaGTCTACAATGTTGCGGACCTCGTCCTCATACTTGTGGAGGTTC +
Preference number: 6 (lower is better)
Translates to: SRVFSTFSIPDSFTA*STMLRTSSSYLWRF
Trigger: GAACCTCCACAAGTATGAGGACGAGGTCCGCAACATTGTAGACAAGGCCGTAAAGGAGTCCGGGATGGAGAAGGTGCTGAAGACCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TGCACCTGGTTGTCCTCCAGCGTCTCCACCAGCACTTCGTCAGACTaGAGCATCATGGTGCCTGTCCGTGGATGTAACTCGTGCTCAAAT +
Preference number: 6 (lower is better)
Translates to: CTWLSSSVSTSTSSD*SIMVPVRGCNSCSN
Trigger: ATTTGAGCACGAGTTACATCCACGGACAGGCACCATGATGCTCAAGTCTGACGAAGTGCTGGTGGAGACGCTGGAGGACAACCAGGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ATGATGGTTGAGAACAGGCCATCTTTCCACTCCCTGGTCGCCGGGTaGATAATGCCAAACAGCTCATCACAGGTGACAGCCTTCGGGTCC +
Preference number: 6 (lower is better)
Translates to: MMVENRPSFHSLVAG*IMPNSSSQVTAFGS
Trigger: GGACCCGAAGGCTGTCACCTGTGATGAGCTGTTTGGCATTATCAACCCGGCGACCAGGGAGTGGAAAGATGGCCTGTTCTCAACCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp AACCTCGTTGTAACTGTCCAGGACGTCCTTCAGCAGCTTGTTCAGTaGTGCCACATCCGTGACGGGGAAGTACTTGGGGTCACCGATTCC +
Preference number: 6 (lower is better)
Translates to: NLVVTVQDVLQQLVQ*CHIRDGEVLGVTDS
Trigger: GGAATCGGTGACCCCAAGTACTTCCCCGTCACGGATGTGGCACAACTGAACAAGCTGCTGAAGGACGTCCTGGACAGTTACAACGAGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp TGCGCTCAGCAGCTTCACGTCAATCGCTTCCAGTTCTaGCTTGATCAGCGGGAACTCCACATCCTTCACCGT +
Preference number: 6 (lower is better)
Translates to: CAQQLHVNRFQF*LDQRELHILHR
Trigger: ACGGTGAAGGATGTGGAGTTCCCGCTGATCAAGTCAGAACTGGAAGCGATTGACGTGAAGCTGCTGAGCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp CTTCTTGTTGTCCTTCCTTTCAAACAGGGGGTTGGCTaGCCACTCCTGCATGGCCTGGGTGATCCCTTCTAC +
Preference number: 6 (lower is better)
Translates to: LLVVLPFKQGVG*PLLHGLGDPFY
Trigger: GTAGAAGGGATCACCCAGGCCATGCAGGAGTGGTCAGCCAACCCCCTGTTTGAAAGGAAGGACAACAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp CGAGGAGACTCCAGGATACGGTTGATCTTGCAGATGTaGGCCACCGCATCCTCAAACAGCACCAGGTTCATG +
Preference number: 6 (lower is better)
Translates to: RGDSRIRLILQM*ATASSNSTRFM
Trigger: CATGAACCTGGTGCTGTTTGAGGATGCGGTGGCTCACATCTGCAAGATCAACCGTATCCTGGAGTCTCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp TACCGAGGGACTTCACCTGTGGCCGCATGGAGGAGATaGTGTTTTCAAGGTCTTCGTCCCCAAACAAGCCTG +
Preference number: 6 (lower is better)
Translates to: YRGTSPVAAWRR*CFQGLRPQTSL
Trigger: CAGGCTTGTTTGGGGACGAAGACCTTGAAAACATCATCTCCTCCATGCGGCCACAGGTGAAGTCCCTCGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp CGAGCACGGGGTCTACAGTTTCACCAATGTTCTCGATaGGTAAGGTGTCACCTGCTGAGATGGCCTGCTCGA +
Preference number: 6 (lower is better)
Translates to: RARGLQFHQCSR*VRCHLLRWPAR
Trigger: TCGAGCAGGCCATCTCAGCAGGTGACACCTTACTCATCGAGAACATTGGTGAAACTGTAGACCCCGTGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp AGAGCCCGCGTGCCGTGTACATGTACACAGAGTAGGTaGTCTCGTCCGTCAGATTTATCACGCGCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: RARVPCTCTQSR*SRPSDLSRAAS
Trigger: TGAAGCAGCGCGTGATAAATCTGACGGACGAGATCACCTACTCTGTGTACATGTACACGGCACGCGGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp AGATCTTATTCAGGGACTTGTAGGGCTCGGGGTCACTaGAGGAGAAGGGGGCATCACGTCGGAACTTCTCTC +
Preference number: 6 (lower is better)
Translates to: RSYSGTCRARGH*RRRGHHVGTSL
Trigger: GAGAGAAGTTCCGACGTGATGCCCCCTTCTCCTTCAGTGACCCCGAGCCCTACAAGTCCCTGAATAAGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106308.10
CDS GCA 72 bp ATCTCAACTATCTTGTTCACCTTGGGCCTGTTTAGCTaGTCGTGGATGCACTGCAGGTTCATGAGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: ISTILFTLGLFS*SWMHCRFMSRA
Trigger: CGCCCGGCTCATGAACCTGCAGTGCATCCACGAGCAGCTAAACAGGCCCAAGGTGAACAAGATAGTTGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp CCATCCCGGACTCCTTTACGGCCTTGTCTACAATGTTaGGGACCTCGTCCTCATACTTGTGGAGGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: PSRTPLRPCLQC*GPRPHTCGGSA
Trigger: AGCTGAACCTCCACAAGTATGAGGACGAGGTCCGCAACATTGTAGACAAGGCCGTAAAGGAGTCCGGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp GGAGGCCCTTTCTGCGGCTGGGCGGTAGTTCTCTCGTaGCTCATTGATCTTTACTTCTGTGATTTTGGCCTC +
Preference number: 6 (lower is better)
Translates to: GGPFCGWAVVLS*LIDLYFCDFGL
Trigger: GAGGCCAAAATCACAGAAGTAAAGATCAATGAGGCACGAGAGAACTACCGCCCAGCCGCAGAAAGGGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp CCCCCAGCTCGATCTTCTCCAGCTTCAGAAACTCAATaGCCGTCTTGTAAAGGTCCTCAATGGTCTGCACGC +
Preference number: 6 (lower is better)
Translates to: PPARSSPASETQ*PSCKGPQWSAR
Trigger: GCGTGCAGACCATTGAGGACCTTTACAAGACGGCCATTGAGTTTCTGAAGCTGGAGAAGATCGAGCTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp CTCAGGACTGCCACTAACGCCTTGCTGAAGTTGACTTaGATGAGGCTGGTGAATGGGTCACGCTGGATGAGT +
Preference number: 6 (lower is better)
Translates to: LRTATNALLKLT*MRLVNGSRWMS
Trigger: ACTCATCCAGCGTGACCCATTCACCAGCCTCATCCAAGTCAACTTCAGCAAGGCGTTAGTGGCAGTCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp GTCCTCCTTGCTGTACATCCCCAGCCCAAACTTGAGTaGCTTTCCACTAGCGTCAAGGCGGAACTTGAGCTT +
Preference number: 6 (lower is better)
Translates to: VLLAVHPQPKLE*LSTSVKAELEL
Trigger: AAGCTCAAGTTCCGCCTTGACGCTAGTGGAAAGCCACTCAAGTTTGGGCTGGGGATGTACAGCAAGGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TCTATGAAGTACCGGATGCGGATGGTTTCTGTGGTGTaGACTAGAGAGGCCTGTAGTGGGATGTCGGGATCC +
Preference number: 6 (lower is better)
Translates to: SMKYRMRMVSVV*TREACSGMSGS
Trigger: GGATCCCGACATCCCACTACAGGCCTCTCTAGTCCACACCACAGAAACCATCCGCATCCGGTACTTCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp CTCTCGAGTGTCGGCTATACCGAGGGACTTCACCTGTaGCCGCATGGAGGAGATGATGTTTTCAAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: LSSVGYTEGLHL*PHGGDDVFKVF
Trigger: GAAGACCTTGAAAACATCATCTCCTCCATGCGGCCACAGGTGAAGTCCCTCGGTATAGCCGACACTCGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp CCCAGGTGCTCGGGGATAGGCAGCAGGGTTTTCCCTTaGATCTTGCCTCCCATCACAAACATCTCGTTCTTC +
Preference number: 6 (lower is better)
Translates to: PRCSGIGSRVFP*ILPPITNISFF
Trigger: GAAGAACGAGATGTTTGTGATGGGAGGCAAGATCAAAGGGAAAACCCTGCTGCCTATCCCCGAGCACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GAGGCCGCCATCTGGGCATCGTACATGAGTTTGGCGTaGTCAAGCTCCGTATTGAACATCTCCAGCATGACC +
Preference number: 6 (lower is better)
Translates to: EAAIWASYMSLA*SSSVLNISSMT
Trigger: GGTCATGCTGGAGATGTTCAATACGGAGCTTGACAACGCCAAACTCATGTACGATGCCCAGATGGCGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TCTGCAGAGGCCGCCATCTGGGCATCGTACATGAGTTaGGCGTTGTCAAGCTCCGTATTGAACATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SAEAAIWASYMS*ALSSSVLNISS
Trigger: GCTGGAGATGTTCAATACGGAGCTTGACAACGCCAAACTCATGTACGATGCCCAGATGGCGGCCTCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp CTCAGCAGCTTCACGTCAATCGCTTCCAGTTCTGACTaGATCAGCGGGAACTCCACATCCTTCACCGTCGTC +
Preference number: 6 (lower is better)
Translates to: LSSFTSIASSSD*ISGNSTSFTVV
Trigger: GACGACGGTGAAGGATGTGGAGTTCCCGCTGATCAAGTCAGAACTGGAAGCGATTGACGTGAAGCTGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp ACAGCACGCAGGGACGTGATCATGTTTTTCACGGTGTaGTCCAGTCCCACGAAGGCATCCCAGGGTTTCATC +
Preference number: 6 (lower is better)
Translates to: TARRDVIMFFTV*SSPTKASQGFI
Trigger: GATGAAACCCTGGGATGCCTTCGTGGGACTGGACAACACCGTGAAAAACATGATCACGTCCCTGCGTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TCCATCCCGGACTCCTTTACGGCCTTGTCTACAATGTaGCGGACCTCGTCCTCATACTTGTGGAGGTTCAGC +
Preference number: 6 (lower is better)
Translates to: SIPDSFTALSTM*RTSSSYLWRFS
Trigger: GCTGAACCTCCACAAGTATGAGGACGAGGTCCGCAACATTGTAGACAAGGCCGTAAAGGAGTCCGGGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp AACTCGTCCTCCTTGCTGTACATCCCCAGCCCAAACTaGAGTGGCTTTCCACTAGCGTCAAGGCGGAACTTG +
Preference number: 6 (lower is better)
Translates to: NSSSLLYIPSPN*SGFPLASRRNL
Trigger: CAAGTTCCGCCTTGACGCTAGTGGAAAGCCACTCAAGTTTGGGCTGGGGATGTACAGCAAGGAGGACGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp CTGTGCAGCGTCTCCTGGTCTTTCTCATCAACCATCTaGTCCCCATACACTCGCTCAGCCTCATGCAGCCAA +
Preference number: 6 (lower is better)
Translates to: LCSVSWSFSSTI*SPYTRSASCSQ
Trigger: TTGGCTGCATGAGGCTGAGCGAGTGTATGGGGACAAGATGGTTGATGAGAAAGACCAGGAGACGCTGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp ATCAGGAACACCGAGGGCACGTTCTTCACCGCAGACTaGATGTACTGGGTAGCCAGGTCCATCTTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: IRNTEGTFFTAD*MYWVARSILRS
Trigger: AGACCTCAAGATGGACCTGGCTACCCAGTACATCAAGTCTGCGGTGAAGAACGTGCCCTCGGTGTTCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GTGAGCAGGGCCATGTTCTCCTCTGCTCCAATCAGTTTGCCCCACTaGTCTGCCTTGAACTTGAGGAGGACAGAAGACACTGTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: VSRAMFSSAPISLPH*SALNLRRTEDTVSR
Trigger: TCTGGAGACAGTGTCTTCTGTCCTCCTCAAGTTCAAGGCAGACAAGTGGGGCAAACTGATTGGAGCAGAGGAGAACATGGCCCTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GTCCTTAAAGAAAAGCTTCATGTTGGCACAGCAGAAGTCGTAGGCTaGGAAGAGCCCCTTGAGGACGCTCACCGACAGGGAGATGTTGCC +
Preference number: 6 (lower is better)
Translates to: VLKEKLHVGTAEVVG*EEPLEDAHRQGDVA
Trigger: GGCAACATCTCCCTGTCGGTGAGCGTCCTCAAGGGGCTCTTCCAAGCCTACGACTTCTGCTGTGCCAACATGAAGCTTTTCTTTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp CAGGAGCTTTGCGGAAGACTCCATACAGTTGCAGTCGTCAAAGGCTaGGCAGAAGATGGTGGCCAGCCTCCTGTCCAGGTCTTGAATCTT +
Preference number: 6 (lower is better)
Translates to: QELCGRLHTVAVVKG*AEDGGQPPVQVLNL
Trigger: AAGATTCAAGACCTGGACAGGAGGCTGGCCACCATCTTCTGCCAAGCCTTTGACGACTGCAACTGTATGGAGTCTTCCGCAAAGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp CCATCTGCAGAGGCCGCCATCTGGGCATCGTACATGAGTTTGGCGTaGTCAAGCTCCGTATTGAACATCTCCAGCATGACCGAGTATCTG +
Preference number: 6 (lower is better)
Translates to: PSAEAAIWASYMSLA*SSSVLNISSMTEYL
Trigger: CAGATACTCGGTCATGCTGGAGATGTTCAATACGGAGCTTGACAACGCCAAACTCATGTACGATGCCCAGATGGCGGCCTCTGCAGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TTGTTCAGGTATCGCTTGAACAGAAAACTCCAGCGCTTGATGGTGTaGAGCAAGGTCTGCTTGAAGGGGCGGCAGTCACACTGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LFRYRLNRKLQRLMV*SKVCLKGRQSHCSQ
Trigger: CTGGCTGCAGTGTGACTGCCGCCCCTTCAAGCAGACCTTGCTCAACACCATCAAGCGCTGGAGTTTTCTGTTCAAGCGATACCTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp AGCACCTTCTCCATCCCGGACTCCTTTACGGCCTTGTCTACAATGTaGCGGACCTCGTCCTCATACTTGTGGAGGTTCAGCTGTAGCAGA +
Preference number: 6 (lower is better)
Translates to: STFSIPDSFTALSTM*RTSSSYLWRFSCSR
Trigger: TCTGCTACAGCTGAACCTCCACAAGTATGAGGACGAGGTCCGCAACATTGTAGACAAGGCCGTAAAGGAGTCCGGGATGGAGAAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp CCGGAGAGGTCACACTCCTTATCAAAGTCCACAAACTCGTCCTCCTaGCTGTACATCCCCAGCCCAAACTTGAGTGGCTTTCCACTAGCG +
Preference number: 6 (lower is better)
Translates to: PERSHSLSKSTNSSS*LYIPSPNLSGFPLA
Trigger: CGCTAGTGGAAAGCCACTCAAGTTTGGGCTGGGGATGTACAGCAAGGAGGACGAGTTTGTGGACTTTGATAAGGAGTGTGACCTCTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ATCTCTTTCTCGGGCGCTTCCGACTCCACCAGCTTTTTCCACCTCTaGGCCGAGCCCTCAATGTCACTGTCCAAGTTCTTGAACTCATCC +
Preference number: 6 (lower is better)
Translates to: ISFSGASDSTSFFHL*AEPSMSLSKFLNSS
Trigger: GGATGAGTTCAAGAACTTGGACAGTGACATTGAGGGCTCGGCCAAGAGGTGGAAAAAGCTGGTGGAGTCGGAAGCGCCCGAGAAAGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp TCAGCAGCTTCACGTCAATCGCTTCCAGTTCTGACTTaGTCAGCGGGAACTCCACATCCTTCACCGTCGTCT +
Preference number: 6 (lower is better)
Translates to: SAASRQSLPVLT*SAGTPHPSPSS
Trigger: AGACGACGGTGAAGGATGTGGAGTTCCCGCTGATCAAGTCAGAACTGGAAGCGATTGACGTGAAGCTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp AAATCTTATTCAGGGACTTGTAGGGCTCGGGGTCACTaGAGGAGAAGGGGGCATCACGTCGGAACTTCTCTC +
Preference number: 6 (lower is better)
Translates to: KSYSGTCRARGH*RRRGHHVGTSL
Trigger: GAGAGAAGTTCCGACGTGATGCCCCCTTCTCCTTCAGTGACCCCGAGCCCTACAAGTCCCTGAATAAGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000084803.12
CDS TCA 72 bp AGCTCCTTCTTCATGGAAAGGACCTGGAAGGTGACTTaGGCCAAGAAGATGAGCTTGTCCCGCTCGAAGAGC +
Preference number: 6 (lower is better)
Translates to: SSFFMERTWKVT*AKKMSLSRSKS
Trigger: GCTCTTCGAGCGGGACAAGCTCATCTTCTTGGCTCAAGTCACCTTCCAGGTCCTTTCCATGAAGAAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp AGAACAGAGCAGTGGACAAGTCTTCCATGTCGGTTGTaGTGGTCAGCTCACCCTTCAGTCCCAGGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: RTEQWTSLPCRL*WSAHPSVPGSA
Trigger: AGCTGAACCTGGGACTGAAGGGTGAGCTGACCATCACAACCGACATGGAAGACTTGTCCACTGCTCTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp GTCGAAGAATTCGGTGAGCAGGGCCATGTTCTCCTCTaGTCCAATCAGTTTGCCCCACTTGTCTGCCTTGAA +
Preference number: 6 (lower is better)
Translates to: VEEFGEQGHVLL*SNQFAPLVCLE
Trigger: TTCAAGGCAGACAAGTGGGGCAAACTGATTGGAGCAGAGGAGAACATGGCCCTGCTCACCGAATTCTTCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp AGACATGTTTTTGTGGATGGGCGGTATCTGGCCATCTaGAGAGGCCGCCATCTGGGCATCGTACATGAGTTT +
Preference number: 6 (lower is better)
Translates to: RHVFVDGRYLAI*RGRHLGIVHEF
Trigger: AAACTCATGTACGATGCCCAGATGGCGGCCTCTGCAGATGGCCAGATACCGCCCATCCACAAAAACATGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp CACTCCTGCATGGCCTGGGTGATCCCTTCTACGTTTTaGTTGGCTTTCTGGATCCGGTTCTGCAGGTTGTAT +
Preference number: 6 (lower is better)
Translates to: HSCMAWVIPSTF*LAFWIRFCRLY
Trigger: ATACAACCTGCAGAACCGGATCCAGAAAGCCAAGCAAAACGTAGAAGGGATCACCCAGGCCATGCAGGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp GTACTGGGTAGCCAGGTCCATCTTGAGGTCTGGGATTaGGTAGCCTTTCTTGAGTGTGATCTGGAAGACGTC +
Preference number: 6 (lower is better)
Translates to: VLGSQVHLEVWD*VAFLECDLEDV
Trigger: GACGTCTTCCAGATCACACTCAAGAAAGGCTACGCAATCCCAGACCTCAAGATGGACCTGGCTACCCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp CTGCCTGCGTACTTTCTCGATGAAGAATTTCCAGCATaGCTCTCGAGTGTCGGCTATACCGAGGGACTTCAC +
Preference number: 6 (lower is better)
Translates to: LPAYFLDEEFPA*LSSVGYTEGLH
Trigger: GTGAAGTCCCTCGGTATAGCCGACACTCGAGAGGCATGCTGGAAATTCTTCATCGAGAAAGTACGCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TTGCCTCCCATCACAAACATCTCGTTCTTCAGCCTGTaGACCTGCTTCACAATGTCTTCTGACACCACCCGG +
Preference number: 6 (lower is better)
Translates to: LPPITNISFFSL*TCFTMSSDTTR
Trigger: CCGGGTGGTGTCAGAAGACATTGTGAAGCAGGTCCACAGGCTGAAGAACGAGATGTTTGTGATGGGAGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp CAGGATAAAGTAGAGAAGGGAGGCCCTTTCTGCGGCTaGGCGGTAGTTCTCTCGTGCCTCATTGATCTTTAC +
Preference number: 6 (lower is better)
Translates to: QDKVEKGGPFCG*AVVLSCLIDLY
Trigger: GTAAAGATCAATGAGGCACGAGAGAACTACCGCCCAGCCGCAGAAAGGGCCTCCCTTCTCTACTTTATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp AGATTGGTGTGGAAGGGCTGCTCTCTTTGTAGGACTTaGAGAACTCCACGCTCCGGCCTTCAACGAACTTAC +
Preference number: 6 (lower is better)
Translates to: RLVWKGCSLCRT*RTPRSGLQRTY
Trigger: GTAAGTTCGTTGAAGGCCGGAGCGTGGAGTTCTCCAAGTCCTACAAAGAGAGCAGCCCTTCCACACCAATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TCCTGCATGGCCTGGGTGATCCCTTCTACGTTTTGCTaGGCTTTCTGGATCCGGTTCTGCAGGTTGTATAGC +
Preference number: 6 (lower is better)
Translates to: SCMAWVIPSTFC*AFWIRFCRLYS
Trigger: GCTATACAACCTGCAGAACCGGATCCAGAAAGCCAAGCAAAACGTAGAAGGGATCACCCAGGCCATGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TATCGCTTGAACAGAAAACTCCAGCGCTTGATGGTGTaGAGCAAGGTCTGCTTGAAGGGGCGGCAGTCACAC +
Preference number: 6 (lower is better)
Translates to: YRLNRKLQRLMV*SKVCLKGRQSH
Trigger: GTGTGACTGCCGCCCCTTCAAGCAGACCTTGCTCAACACCATCAAGCGCTGGAGTTTTCTGTTCAAGCGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GCCTTGTCTACAATGTTGCGGACCTCGTCCTCATACTaGTGGAGGTTCAGCTGTAGCAGATCTGCCAGGGTA +
Preference number: 6 (lower is better)
Translates to: ALSTMLRTSSSY*WRFSCSRSARV
Trigger: TACCCTGGCAGATCTGCTACAGCTGAACCTCCACAAGTATGAGGACGAGGTCCGCAACATTGTAGACAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TTCAGCACCTTCTCCATCCCGGACTCCTTTACGGCCTaGTCTACAATGTTGCGGACCTCGTCCTCATACTTG +
Preference number: 6 (lower is better)
Translates to: FSTFSIPDSFTA*STMLRTSSSYL
Trigger: CAAGTATGAGGACGAGGTCCGCAACATTGTAGACAAGGCCGTAAAGGAGTCCGGGATGGAGAAGGTGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp AACTTGAGTGGCTTTCCACTAGCGTCAAGGCGGAACTaGAGCTTACACAGGCTGTCGAAGAGCTTGGACAGG +
Preference number: 6 (lower is better)
Translates to: NLSGFPLASRRN*SLHRLSKSLDR
Trigger: CCTGTCCAAGCTCTTCGACAGCCTGTGTAAGCTCAAGTTCCGCCTTGACGCTAGTGGAAAGCCACTCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp CAGCTCCTTCTTCATGGAAAGGACCTGGAAGGTGACTaGAGCCAAGAAGATGAGCTTGTCCCGCTCGAAGAG +
Preference number: 6 (lower is better)
Translates to: QLLLHGKDLEGD*SQEDELVPLEE
Trigger: CTCTTCGAGCGGGACAAGCTCATCTTCTTGGCTCAAGTCACCTTCCAGGTCCTTTCCATGAAGAAGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GCCATCTGGGCATCGTACATGAGTTTGGCGTTGTCAAGCTCCGTATaGAACATCTCCAGCATGACCGAGTATCTGGGTACCACCTCGACA +
Preference number: 6 (lower is better)
Translates to: AIWASYMSLALSSSV*NISSMTEYLGTTST
Trigger: TGTCGAGGTGGTACCCAGATACTCGGTCATGCTGGAGATGTTCAATACGGAGCTTGACAACGCCAAACTCATGTACGATGCCCAGATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GTCTCTGCGCTCAGCAGCTTCACGTCAATCGCTTCCAGTTCTGACTaGATCAGCGGGAACTCCACATCCTTCACCGTCGTCTTTATCTCA +
Preference number: 6 (lower is better)
Translates to: VSALSSFTSIASSSD*ISGNSTSFTVVFIS
Trigger: TGAGATAAAGACGACGGTGAAGGATGTGGAGTTCCCGCTGATCAAGTCAGAACTGGAAGCGATTGACGTGAAGCTGCTGAGCGCAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ATGACGTGGTTGTTCAGGTATCGCTTGAACAGAAAACTCCAGCGCTaGATGGTGTTGAGCAAGGTCTGCTTGAAGGGGCGGCAGTCACAC +
Preference number: 6 (lower is better)
Translates to: MTWLFRYRLNRKLQR*MVLSKVCLKGRQSH
Trigger: GTGTGACTGCCGCCCCTTCAAGCAGACCTTGCTCAACACCATCAAGCGCTGGAGTTTTCTGTTCAAGCGATACCTGAACAACCACGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp AAGTCCACAAACTCGTCCTCCTTGCTGTACATCCCCAGCCCAAACTaGAGTGGCTTTCCACTAGCGTCAAGGCGGAACTTGAGCTTACAC +
Preference number: 6 (lower is better)
Translates to: KSTNSSSLLYIPSPN*SGFPLASRRNLSLH
Trigger: GTGTAAGCTCAAGTTCCGCCTTGACGCTAGTGGAAAGCCACTCAAGTTTGGGCTGGGGATGTACAGCAAGGAGGACGAGTTTGTGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TTCAGCAGCTTGTTCAGTTGTGCCACATCCGTGACGGGGAAGTACTaGGGGTCACCGATTCCTTGCGTAAAGTGGCAGAAGATGTTGGGT +
Preference number: 6 (lower is better)
Translates to: FSSLFSCATSVTGKY*GSPIPCVKWQKMLG
Trigger: ACCCAACATCTTCTGCCACTTTACGCAAGGAATCGGTGACCCCAAGTACTTCCCCGTCACGGATGTGGCACAACTGAACAAGCTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ATACCAGCAGCATTGAGCGTCAGCACCAGGACAGGGTTATCTATTTaGTCGAAGAATTCGGTGAGCAGGGCCATGTTCTCCTCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: IPAALSVSTRTGLSI*SKNSVSRAMFSSAP
Trigger: TGGAGCAGAGGAGAACATGGCCCTGCTCACCGAATTCTTCGACAAAATAGATAACCCTGTCCTGGTGCTGACGCTCAATGCTGCTGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TTGATCAGCGGGAACTCCACATCCTTCACCGTCGTCTTTATCTCATaGTACCAGCCGACAATGAGCTCCAGGTTGCCTACAAACTTCCGG +
Preference number: 6 (lower is better)
Translates to: LISGNSTSFTVVFIS*YQPTMSSRLPTNFR
Trigger: CCGGAAGTTTGTAGGCAACCTGGAGCTCATTGTCGGCTGGTACAATGAGATAAAGACGACGGTGAAGGATGTGGAGTTCCCGCTGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp AGGGGTGGGCGCGTGCCCGAAGATGAGGAAGTTCTTCATAAATTCTaGAAGGTCATCCACCCAAAGGTAGGAGTACCTCTCAAAGGAGTC +
Preference number: 6 (lower is better)
Translates to: RGGRVPEDEEVLHKF*KVIHPKVGVPLKGV
Trigger: GACTCCTTTGAGAGGTACTCCTACCTTTGGGTGGATGACCTTCAAGAATTTATGAAGAACTTCCTCATCTTCGGGCACGCGCCCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TCCAGATCAGCGAGGCTGTTGATGACGTGGTTGTTCAGGTATCGCTaGAACAGAAAACTCCAGCGCTTGATGGTGTTGAGCAAGGTCTGC +
Preference number: 6 (lower is better)
Translates to: SRSARLLMTWLFRYR*NRKLQRLMVLSKVC
Trigger: GCAGACCTTGCTCAACACCATCAAGCGCTGGAGTTTTCTGTTCAAGCGATACCTGAACAACCACGTCATCAACAGCCTCGCTGATCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ACGGTGTTGTCCAGTCCCACGAAGGCATCCCAGGGTTTCATCTCCTaGTCCAAAGACCTCACGTCCTTGGCAAACTTCTTACAGTCAATG +
Preference number: 6 (lower is better)
Translates to: TVLSSPTKASQGFIS*SKDLTSLANFLQSM
Trigger: CATTGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTTTGGACAAGGAGATGAAACCCTGGGATGCCTTCGTGGGACTGGACAACACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TCCTTTACGGCCTTGTCTACAATGTTGCGGACCTCGTCCTCATACTaGTGGAGGTTCAGCTGTAGCAGATCTGCCAGGGTAGTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SFTALSTMLRTSSSY*WRFSCSRSARVVSS
Trigger: AGAAGAGACTACCCTGGCAGATCTGCTACAGCTGAACCTCCACAAGTATGAGGACGAGGTCCGCAACATTGTAGACAAGGCCGTAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp TTGTGCCACATCCGTGACGGGGAAGTACTTGGGGTCACCGATTCCTaGCGTAAAGTGGCAGAAGATGTTGGGTTTGGCAAAGAGATTCTC +
Preference number: 6 (lower is better)
Translates to: LCHIRDGEVLGVTDS*RKVAEDVGFGKEIL
Trigger: GAGAATCTCTTTGCCAAACCCAACATCTTCTGCCACTTTACGCAAGGAATCGGTGACCCCAAGTACTTCCCCGTCACGGATGTGGCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp GGTCCAGAGGGTCATATTTGCACTCAGCAAAGACCTTaGCCAGTTCGAAGACCTCGTCGTAGATCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: GPEGHICTQQRP*PVRRPRRRSGS
Trigger: TGACCCAGATCTACGACGAGGTCTTCGAACTGGTCAAGGTCTTTGCTGAGTGCAAATATGACCCTCTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp AAGGGGGCATCACGTCGGAACTTCTCTCTGAATTCGTaGTGCTTGAGCTCAAACTGTTGGCACTTTCGTCTC +
Preference number: 6 (lower is better)
Translates to: KGASRRNFSLNS*CLSSNCWHFRL
Trigger: GAGACGAAAGTGCCAACAGTTTGAGCTCAAGCAGCACGAATTCAGAGAGAAGTTCCGACGTGATGCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp TTGAGCATCATGGTGCCTGTCCGTGGATGTAACTCGTaGTCAAATTCCATGGTAGTCCAGGTGATGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LSIMVPVRGCNS*SNSMVVQVMSR
Trigger: CCTGGACATCACCTGGACTACCATGGAATTTGAGCACGAGTTACATCCACGGACAGGCACCATGATGCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp GCTCTGAACAGTTCTGCATTTTCCACAACCATGGCTTaGATTCTCACACCAGCTTCCTTGACCGCAGCGTAC +
Preference number: 6 (lower is better)
Translates to: ALNSSAFSTTMA*ILTPASLTAAY
Trigger: GTACGCTGCGGTCAAGGAAGCTGGTGTGAGAATCCAAGCCATGGTTGTGGAAAATGCAGAACTGTTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TTGTCTACAATGTTGCGGACCTCGTCCTCATACTTGTaGAGGTTCAGCTGTAGCAGATCTGCCAGGGTAGTC +
Preference number: 6 (lower is better)
Translates to: LSTMLRTSSSYL*RFSCSRSARVV
Trigger: GACTACCCTGGCAGATCTGCTACAGCTGAACCTCCACAAGTATGAGGACGAGGTCCGCAACATTGTAGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp AAGTACTTGGTGTGTAGGATCAGGCGGAAACTGGGGTaGTACTCCACCTCCTTGTCGCCGATCTTAATGAAC +
Preference number: 6 (lower is better)
Translates to: KYLVCRIRRKLG*YSTSLSPILMN
Trigger: GTTCATTAAGATCGGCGACAAGGAGGTGGAGTACCACCCCAGTTTCCGCCTGATCCTACACACCAAGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TCCTCTGCTCCAATCAGTTTGCCCCACTTGTCTGCCTaGAACTTGAGGAGGACAGAAGACACTGTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: SSAPISLPHLSA*NLRRTEDTVSR
Trigger: TCTGGAGACAGTGTCTTCTGTCCTCCTCAAGTTCAAGGCAGACAAGTGGGGCAAACTGATTGGAGCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GCATTGAGCGTCAGCACCAGGACAGGGTTATCTATTTaGTCGAAGAATTCGGTGAGCAGGGCCATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: ALSVSTRTGLSI*SKNSVSRAMFS
Trigger: GGAGAACATGGCCCTGCTCACCGAATTCTTCGACAAAATAGATAACCCTGTCCTGGTGCTGACGCTCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GGGAACTCCACATCCTTCACCGTCGTCTTTATCTCATaGTACCAGCCGACAATGAGCTCCAGGTTGCCTACA +
Preference number: 6 (lower is better)
Translates to: GNSTSFTVVFIS*YQPTMSSRLPT
Trigger: TGTAGGCAACCTGGAGCTCATTGTCGGCTGGTACAATGAGATAAAGACGACGGTGAAGGATGTGGAGTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TTGTTCAGGTATCGCTTGAACAGAAAACTCCAGCGCTaGATGGTGTTGAGCAAGGTCTGCTTGAAGGGGCGG +
Preference number: 6 (lower is better)
Translates to: LFRYRLNRKLQR*MVLSKVCLKGR
Trigger: CCGCCCCTTCAAGCAGACCTTGCTCAACACCATCAAGCGCTGGAGTTTTCTGTTCAAGCGATACCTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GCGAGGCTGTTGATGACGTGGTTGTTCAGGTATCGCTaGAACAGAAAACTCCAGCGCTTGATGGTGTTGAGC +
Preference number: 6 (lower is better)
Translates to: ARLLMTWLFRYR*NRKLQRLMVLS
Trigger: GCTCAACACCATCAAGCGCTGGAGTTTTCTGTTCAAGCGATACCTGAACAACCACGTCATCAACAGCCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TCCAGTCCCACGAAGGCATCCCAGGGTTTCATCTCCTaGTCCAAAGACCTCACGTCCTTGGCAAACTTCTTA +
Preference number: 6 (lower is better)
Translates to: SSPTKASQGFIS*SKDLTSLANFL
Trigger: TAAGAAGTTTGCCAAGGACGTGAGGTCTTTGGACAAGGAGATGAAACCCTGGGATGCCTTCGTGGGACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp AGGGACTCTGGGAAGCCCAGGCAAGGAATGATCATACCAGCAGCATaGAGCGTCAGCACCAGGACAGGGTTATCTATTTTGTCGAAGAAT +
Preference number: 6 (lower is better)
Translates to: RDSGKPRQGMIIPAA*SVSTRTGLSILSKN
Trigger: ATTCTTCGACAAAATAGATAACCCTGTCCTGGTGCTGACGCTCAATGCTGCTGGTATGATCATTCCTTGCCTGGGCTTCCCAGAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GTCCACACCCTCTACCCACTGCTGGTATTTCTTCATCCGGCAGCTTaGCAGCAACCCCATCATCTCGTCGTACTTGTCATAGATAAGCTT +
Preference number: 6 (lower is better)
Translates to: VHTLYPLLVFLHPAA*QQPHHLVVLVIDKL
Trigger: AAGCTTATCTATGACAAGTACGACGAGATGATGGGGTTGCTGCAAAGCTGCCGGATGAAGAAATACCAGCAGTGGGTAGAGGGTGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ACCGTCGTCTTTATCTCATTGTACCAGCCGACAATGAGCTCCAGGTaGCCTACAAACTTCCGGAAGGTTTCGTTCTCCGAGAAGAGCTTC +
Preference number: 6 (lower is better)
Translates to: TVVFISLYQPTMSSR*PTNFRKVSFSEKSF
Trigger: GAAGCTCTTCTCGGAGAACGAAACCTTCCGGAAGTTTGTAGGCAACCTGGAGCTCATTGTCGGCTGGTACAATGAGATAAAGACGACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp ACGTCCTTGGCAAACTTCTTACAGTCAATGTCCATCTGCTCCACATaGATGTCCTTCCACTTGGTGGTCTTCCAGTCGTCGATGCTGGTG +
Preference number: 6 (lower is better)
Translates to: TSLANFLQSMSICST*MSFHLVVFQSSMLV
Trigger: CACCAGCATCGACGACTGGAAGACCACCAAGTGGAAGGACATCAATGTGGAGCAGATGGACATTGACTGTAAGAAGTTTGCCAAGGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp CTCCTCCCCAAGATCGTCAAAGAATTTCTTGACAGATaGTATGGTGACCCTGTGCAGCGTCTCCTGGTCTTT +
Preference number: 6 (lower is better)
Translates to: LLPKIVKEFLDR*YGDPVQRLLVF
Trigger: AAAGACCAGGAGACGCTGCACAGGGTCACCATAGCATCTGTCAAGAAATTCTTTGACGATCTTGGGGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp CTTGATGAAGTAAACTCCTTTGGACTTGAGGGACTCTaGGAAGCCCAGGCAAGGAATGATCATACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LDEVNSFGLEGL*EAQARNDHTSS
Trigger: GCTGCTGGTATGATCATTCCTTGCCTGGGCTTCCCAGAGTCCCTCAAGTCCAAAGGAGTTTACTTCATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TGGCTTTTTCCAGGATCTCAACTATCTTGTTCACCTTaGGCCTGTTTAGCTGCTCGTGGATGCACTGCAGGT +
Preference number: 6 (lower is better)
Translates to: WLFPGSQLSCSP*ACLAARGCTAG
Trigger: ACCTGCAGTGCATCCACGAGCAGCTAAACAGGCCCAAGGTGAACAAGATAGTTGAGATCCTGGAAAAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TTGACAGATGCTATGGTGACCCTGTGCAGCGTCTCCTaGTCTTTCTCATCAACCATCTTGTCCCCATACACT +
Preference number: 6 (lower is better)
Translates to: LTDAMVTLCSVS*SFSSTILSPYT
Trigger: AGTGTATGGGGACAAGATGGTTGATGAGAAAGACCAGGAGACGCTGCACAGGGTCACCATAGCATCTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp CTTGATGTACTGGGTAGCCAGGTCCATCTTGAGGTCTaGGATTGCGTAGCCTTTCTTGAGTGTGATCTGGAA +
Preference number: 6 (lower is better)
Translates to: LDVLGSQVHLEV*DCVAFLECDLE
Trigger: TTCCAGATCACACTCAAGAAAGGCTACGCAATCCCAGACCTCAAGATGGACCTGGCTACCCAGTACATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GCATCGTACATGAGTTTGGCGTTGTCAAGCTCCGTATaGAACATCTCCAGCATGACCGAGTATCTGGGTACC +
Preference number: 6 (lower is better)
Translates to: ASYMSLALSSSV*NISSMTEYLGT
Trigger: GGTACCCAGATACTCGGTCATGCTGGAGATGTTCAATACGGAGCTTGACAACGCCAAACTCATGTACGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp CTCTACCCACTGCTGGTATTTCTTCATCCGGCAGCTTaGCAGCAACCCCATCATCTCGTCGTACTTGTCATA +
Preference number: 6 (lower is better)
Translates to: LYPLLVFLHPAA*QQPHHLVVLVI
Trigger: TATGACAAGTACGACGAGATGATGGGGTTGCTGCAAAGCTGCCGGATGAAGAAATACCAGCAGTGGGTAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TGCTCTGAACAGTTCTGCATTTTCCACAACCATGGCTaGGATTCTCACACCAGCTTCCTTGACCGCAGCGTA +
Preference number: 6 (lower is better)
Translates to: CSEQFCIFHNHG*DSHTSFLDRSV
Trigger: TACGCTGCGGTCAAGGAAGCTGGTGTGAGAATCCAAGCCATGGTTGTGGAAAATGCAGAACTGTTCAGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GCATCACGTCGGAACTTCTCTCTGAATTCGTGCTGCTaGAGCTCAAACTGTTGGCACTTTCGTCTCAGGATG +
Preference number: 6 (lower is better)
Translates to: ASRRNFSLNSCC*SSNCWHFRLRM
Trigger: CATCCTGAGACGAAAGTGCCAACAGTTTGAGCTCAAGCAGCACGAATTCAGAGAGAAGTTCCGACGTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TTGCTCAGGTTGGCATTGAGTTCTGCAATCTTGTTTTaGATCCGGGACAGTTTCTCCTGTGCCTCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: LLRLALSSAILF*IRDSFSCASAS
Trigger: GCTGGCTGAGGCACAGGAGAAACTGTCCCGGATCAAAAACAAGATTGCAGAACTCAATGCCAACCTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GCTGTTCGGGTGATGTTCATGAAGCTTTCCAGATCAGCGAGGCTGTaGATGACGTGGTTGTTCAGGTATCGCTTGAACAGAAAACTCCAG +
Preference number: 6 (lower is better)
Translates to: AVRVMFMKLSRSARL*MTWLFRYRLNRKLQ
Trigger: CTGGAGTTTTCTGTTCAAGCGATACCTGAACAACCACGTCATCAACAGCCTCGCTGATCTGGAAAGCTTCATGAACATCACCCGAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GGTTTGGCAAAGAGATTCTCCTCCCCAAGATCGTCAAAGAATTTCTaGACAGATGCTATGGTGACCCTGTGCAGCGTCTCCTGGTCTTTC +
Preference number: 6 (lower is better)
Translates to: GLAKRFSSPRSSKNF*TDAMVTLCSVSWSF
Trigger: GAAAGACCAGGAGACGCTGCACAGGGTCACCATAGCATCTGTCAAGAAATTCTTTGACGATCTTGGGGAGGAGAATCTCTTTGCCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GCCAGGTCTGTTTCACAGGCTTTCTGTTTCTCAGTAACATTCTTGTaGATGACCTCCACCTTCATCTCCTCCTCGTCCGCAATGGCTTTC +
Preference number: 6 (lower is better)
Translates to: ARSVSQAFCFSVTFL*MTSTFISSSSAMAF
Trigger: GAAAGCCATTGCGGACGAGGAGGAGATGAAGGTGGAGGTCATCAACAAGAATGTTACTGAGAAACAGAAAGCCTGTGAAACAGACCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp TCACCGTCGTCTTTATCTCATTGTACCAGCCGACAATaGGCTCCAGGTTGCCTACAAACTTCCGGAAGGTTT +
Preference number: 6 (lower is better)
Translates to: SPSSLSHCTSRQ*APGCLQTSGRF
Trigger: AAACCTTCCGGAAGTTTGTAGGCAACCTGGAGCTCATTGTCGGCTGGTACAATGAGATAAAGACGACGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp TCAGAAACTCAATGGCCGTCTTGTAAAGGTCCTCAATaGTCTGCACGCGGTGAAAGAAGGAATTCATTCGGG +
Preference number: 6 (lower is better)
Translates to: SETQWPSCKGPQ*SARGERRNSFG
Trigger: CCCGAATGAATTCCTTCTTTCACCGCGTGCAGACCATTGAGGACCTTTACAAGACGGCCATTGAGTTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TCAAAACTAGAGTCTCCAGGGTCCAGAGGGTCATATTaGCACTCAGCAAAGACCTTGACCAGTTCGAAGACC +
Preference number: 6 (lower is better)
Translates to: SKLESPGSRGSY*HSAKTLTSSKT
Trigger: GGTCTTCGAACTGGTCAAGGTCTTTGCTGAGTGCAAATATGACCCTCTGGACCCTGGAGACTCTAGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TTTATCTCATTGTACCAGCCGACAATGAGCTCCAGGTaGCCTACAAACTTCCGGAAGGTTTCGTTCTCCGAG +
Preference number: 6 (lower is better)
Translates to: FISLYQPTMSSR*PTNFRKVSFSE
Trigger: CTCGGAGAACGAAACCTTCCGGAAGTTTGTAGGCAACCTGGAGCTCATTGTCGGCTGGTACAATGAGATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GCAAACTTCTTACAGTCAATGTCCATCTGCTCCACATaGATGTCCTTCCACTTGGTGGTCTTCCAGTCGTCG +
Preference number: 6 (lower is better)
Translates to: ANFLQSMSICST*MSFHLVVFQSS
Trigger: CGACGACTGGAAGACCACCAAGTGGAAGGACATCAATGTGGAGCAGATGGACATTGACTGTAAGAAGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp CAGGGTTTCATCTCCTTGTCCAAAGACCTCACGTCCTaGGCAAACTTCTTACAGTCAATGTCCATCTGCTCC +
Preference number: 6 (lower is better)
Translates to: QGFISLSKDLTS*ANFLQSMSICS
Trigger: GGAGCAGATGGACATTGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTTTGGACAAGGAGATGAAACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp AAGAGATTCTCCTCCCCAAGATCGTCAAAGAATTTCTaGACAGATGCTATGGTGACCCTGTGCAGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: KRFSSPRSSKNF*TDAMVTLCSVS
Trigger: GGAGACGCTGCACAGGGTCACCATAGCATCTGTCAAGAAATTCTTTGACGATCTTGGGGAGGAGAATCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp AAGGCATCCCAGGGTTTCATCTCCTTGTCCAAAGACCTCACGTCCTaGGCAAACTTCTTACAGTCAATGTCCATCTGCTCCACATTGATG +
Preference number: 6 (lower is better)
Translates to: KASQGFISLSKDLTS*ANFLQSMSICSTLM
Trigger: CATCAATGTGGAGCAGATGGACATTGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTTTGGACAAGGAGATGAAACCCTGGGATGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp ACGTCCTTGGCAAACTTCTTACAGTCAATGTCCATCTaGTCCACATTGATGTCCTTCCACTTGGTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: TSLANFLQSMSI*STLMSFHLVVF
Trigger: GAAGACCACCAAGTGGAAGGACATCAATGTGGAGCAGATGGACATTGACTGTAAGAAGTTTGCCAAGGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp GGTTTCGTTCTCCGAGAAGAGCTTCTCCGCGCTCTCTaGAATCTCTTTCTGCTGCTGGAAGTTCAAATATTT +
Preference number: 6 (lower is better)
Translates to: GFVLREELLRAL*NLFLLLEVQIF
Trigger: AAATATTTGAACTTCCAGCAGCAGAAAGAGATTCCAGAGAGCGCGGAGAAGCTCTTCTCGGAGAACGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CCA 72 bp AGGGTTTCATCTCCTTGTCCAAAGACCTCACGTCCTTaGCAAACTTCTTACAGTCAATGTCCATCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: RVSSPCPKTSRP*QTSYSQCPSAP
Trigger: TGGAGCAGATGGACATTGACTGTAAGAAGTTTGCCAAGGACGTGAGGTCTTTGGACAAGGAGATGAAACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TTGGCAGAAGATGGTGGCCAGCCTCCTGTCCAGGTCTaGAATCTTAGTCTCAAAGTCACTGTAATCATCATC +
Preference number: 6 (lower is better)
Translates to: LAEDGGQPPVQV*NLSLKVTVIII
Trigger: GATGATGATTACAGTGACTTTGAGACTAAGATTCAAGACCTGGACAGGAGGCTGGCCACCATCTTCTGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GTGATGTTCATGAAGCTTTCCAGATCAGCGAGGCTGTaGATGACGTGGTTGTTCAGGTATCGCTTGAACAGA +
Preference number: 6 (lower is better)
Translates to: VMFMKLSRSARL*MTWLFRYRLNR
Trigger: TCTGTTCAAGCGATACCTGAACAACCACGTCATCAACAGCCTCGCTGATCTGGAAAGCTTCATGAACATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp GTTTCACAGGCTTTCTGTTTCTCAGTAACATTCTTGTaGATGACCTCCACCTTCATCTCCTCCTCGTCCGCA +
Preference number: 6 (lower is better)
Translates to: VSQAFCFSVTFL*MTSTFISSSSA
Trigger: TGCGGACGAGGAGGAGATGAAGGTGGAGGTCATCAACAAGAATGTTACTGAGAAACAGAAAGCCTGTGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GTCAAAGGCTTGGCAGAAGATGGTGGCCAGCCTCCTGTCCAGGTCTaGAATCTTAGTCTCAAAGTCACTGTAATCATCATCAAAACTAGA +
Preference number: 6 (lower is better)
Translates to: VKGLAEDGGQPPVQV*NLSLKVTVIIIKTR
Trigger: TCTAGTTTTGATGATGATTACAGTGACTTTGAGACTAAGATTCAAGACCTGGACAGGAGGCTGGCCACCATCTTCTGCCAAGCCTTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp TCAAAGAATTTCTTGACAGATGCTATGGTGACCCTGTaGAGCGTCTCCTGGTCTTTCTCATCAACCATCTTG +
Preference number: 6 (lower is better)
Translates to: SKNFLTDAMVTL*SVSWSFSSTIL
Trigger: CAAGATGGTTGATGAGAAAGACCAGGAGACGCTGCACAGGGTCACCATAGCATCTGTCAAGAAATTCTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TCAGGTTCTCCAGTTTGTTATAGAGATCCGGTTTGTTaGTGGCTTCCACCACGTTTGGTGTCTTCACAGCAT +
Preference number: 6 (lower is better)
Translates to: SGSPVCYRDPVC*WLPPRLVSSQH
Trigger: ATGCTGTGAAGACACCAAACGTGGTGGAAGCCACAAACAAACCGGATCTCTATAACAAACTGGAGAACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 90 bp GGGACAAGGCTTATTATCTCTCCCAGGAAGTTAAACTTCTTTTTCTaGGCCCGAATTGCATCTTGGACACACTTTACCTGTACAGCAATC +
Preference number: 6 (lower is better)
Translates to: GTRLIISPRKLNFFF*ARIASWTHFTCTAI
Trigger: GATTGCTGTACAGGTAAAGTGTGTCCAAGATGCAATTCGGGCCAAGAAAAAGAAGTTTAACTTCCTGGGAGAGATAATAAGCCTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS GCA 72 bp TCCCAGGAAGTTAAACTTCTTTTTCTTGGCCCGAATTaGATCTTGGACACACTTTACCTGTACAGCAATCAC +
Preference number: 6 (lower is better)
Translates to: SQEVKLLFLGPN*ILDTLYLYSNH
Trigger: GTGATTGCTGTACAGGTAAAGTGTGTCCAAGATGCAATTCGGGCCAAGAAAAAGAAGTTTAACTTCCTGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS CAA 72 bp TTCTCTCGTGCCTCATTGATCTTTACTTCTGTGATTTaGGCCTCTTGGACCTTCTCCTCAATTTCATTGGCT +
Preference number: 6 (lower is better)
Translates to: FSRASLIFTSVI*ASWTFSSISLA
Trigger: AGCCAATGAAATTGAGGAGAAGGTCCAAGAGGCCAAAATCACAGAAGTAAAGATCAATGAGGCACGAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp GATCAAATTCATCTAAGACCACGGTGTCAATATAGTTaGCATAATCCTTCCAGGACTGGCTGGTTGTATCTG +
Preference number: 6 (lower is better)
Translates to: DQIHLRPRCQYS*HNPSRTGWLYL
Trigger: CAGATACAACCAGCCAGTCCTGGAAGGATTATGTCAACTATATTGACACCGTGGTCTTAGATGAATTTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9
CDS TCA 72 bp TCATGTTGTCCATTAAGTAATTTAGAGATTTGCGGATaGAGCGATCAAATTCATCTAAGACCACGGTGTCAA +
Preference number: 6 (lower is better)
Translates to: SCCPLSNLEICG*SDQIHLRPRCQ
Trigger: TTGACACCGTGGTCTTAGATGAATTTGATCGCTTCATCCGCAAATCTCTAAATTACTTAATGGACAACATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000084803.12
ENSMUST00000106308.10
ENSMUST00000132685.9