RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DNAH10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038011

Ensembl transcript IDs: ENSMUST00000058440.12, ENSMUST00000141137.7

Found 1115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGTGCCAGCTCCTCTaGCCTGCCGCACATGCTGAG +
Preference number: 2 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGKCQLL*PAAHAE
Trigger: CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGCGCCTGGAGCCGGATaGGCTCCCCGTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEAPGAG*APRWPR
Trigger: CCTTGGCCAACGGGGAGCGCATCCGGCTCCAGGCGC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAGGGCGCAGTGCGCCTaGAGCCGGATGCGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPARAQCA*SRMRSP
Trigger: CGGGGAGCGCATCCGGCTCCAGGCGCACTGCGCCCT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGGCCTCGCAGGCGGCTaGCTTCTCGGCCAGGACGAT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEGLAGG*LLGQDD
Trigger: ATCGTCCTGGCCGAGAAGTCAGCCGCCTGCGAGGCC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGCGCCTGGAGCCGGATaGGCTCCCCGTTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLAPGAG*APRWPR
Trigger: CCTTGGCCAACGGGGAGCGCATCCGGCTCCAGGCGC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGGCTGCCCCAGGGGATaGGAGGGTCACGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEGCPRG*EGHAAG
Trigger: TCCAGCAGCGTGACCCTCGCATCCCCTGGGGCAGCC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGGAGGGAAGATGCCCTaGCAGTTCCCCGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEGGKMP*QFPGTG
Trigger: GCCCGTCCCGGGGAACTGCCAGGGCATCTTCCCTCC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGGCCTCGCAGGCGGCTaGCTTCTCGGCCAGGACGAT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAGLAGG*LLGQDD
Trigger: ATCGTCCTGGCCGAGAAGTCAGCCGCCTGCGAGGCC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGCCATGACCAGCACTaGCTTCAGGGCCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSHDQH*LQGPEP
Trigger: GGGCTCCGGGCCCTGAAGTCAGTGCTGGTCATGGCT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCAGCTCGCGCAGGAGTaGGTCCTCCAGGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEQLAQE*VLQVLE
Trigger: CTCAAGGACCTGGAGGACTCACTCCTGCGCGAGCTG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGCTCAGCCAGCTTCATaGGGTCACTGGCGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEAQPAS*GHWRGQ
Trigger: CTGACCCCGCCAGTGACCTCATGAAGCTGGCTGAGC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGTTGCGGCCCCCTCCTaGCTTCCCCATAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEVAAPS*LPHSSD
Trigger: ATCGCTGCTATGGGGAAGGCAGGAGGGGGCCGCAAC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCTGGACTCCCCTGTCTaGGGCTGCAGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAELDSPV*GCSSSR
Trigger: TCTGCTGGAGCTGCAGCCGCAGACAGGGGAGTCCAG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTCCACCACACCTGGCTaGCGGCCAGCACCACCATGC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSTTPG*RPAPPC
Trigger: GCATGGTGGTGCTGGCCGCCAGCCAGGTGTGGTGGA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCCACCACACCTGGCTaGCGGCCAGCACCACCATGC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASTTPG*RPAPPC
Trigger: GCATGGTGGTGCTGGCCGCCAGCCAGGTGTGGTGGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGGGCGCAGTGCGCCTaGAGCCGGATGCGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGRAQCA*SRMRSP
Trigger: CGGGGAGCGCATCCGGCTCCAGGCGCACTGCGCCCT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGGGGTCGATGCAGAGTaGGAAGCGACTGGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPGVDAE*EATGPG
Trigger: ACCCGGGCCAGTCGCTTCCCACTCTGCATCGACCCC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTGTTGCCCGTGGACGTaGCCAGCTCGCGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLCCPWT*PARAGV
Trigger: CACTCCTGCGCGAGCTGGCCACGTCCACGGGCAACA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGCTCAGCCAGCTTCATaGGGTCACTGGCGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPAQPAS*GHWRGQ
Trigger: CTGACCCCGCCAGTGACCTCATGAAGCTGGCTGAGC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTGGTGGGGTCTGTGGTaGGCCACAGGCGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAWWGLW*ATGGSQ
Trigger: CTGACTTCCGCCTGTGGCTCACCACAGACCCCACCA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTTCAGCTTCTCCCCTTaGCTCCCGTCCACGATCCCC +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEFSFSP*LPSTIP
Trigger: GGGGATCGTGGACGGGAGGCAAGGGGAGAAGCTGAA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCGTGGCTCCCCCTCTTaGAGAGCCAACCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPRGSPS*RANRKS
Trigger: GGACTTCCGGTTGGCTCTGCAAGAGGGGGAGCCACG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGCTGCTGGGGGTCGATaGAGAGTGGGAAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLAAGGR*RVGSDW
Trigger: CCAGTCGCTTCCCACTCTGCATCGACCCCCAGCAGC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGATCCAGTTGAGGGCCTaGTGCTGGGGGTCGATGCAG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEIQLRA*CWGSMQ
Trigger: CTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGAT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGGCTGCCCCAGGGGATaGGAGGGTCACGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGGCPRG*EGHAAG
Trigger: TCCAGCAGCGTGACCCTCGCATCCCCTGGGGCAGCC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCTCTGCTTCACCTGCTaGCCCCTCTCGCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPLCFTC*PLSLSR
Trigger: CCTGGACAGCGAGAGGGGCCAGCAGGTGAAGCAGAG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGATGGTCTGCAGGTCGTaGAGGCGGTTTGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEMVCRS*RRFGAS
Trigger: TGAGGCCCCAAACCGCCTCCACGACCTGCAGACCAT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCCCCACGCGCCACACTaGGCAAGGCCAGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAPHAPH*ARPEKI
Trigger: GATCTTCTCTGGCCTTGCCCAGTGTGGCGCGTGGGG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGGAGGGAAGATGCCCTaGCAGTTCCCCGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGGGKMP*QFPGTG
Trigger: GCCCGTCCCGGGGAACTGCCAGGGCATCTTCCCTCC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGCTCCAGGATCCAGGTaGTGCGGGTGGTATCCACTG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEAPGSR*CGWYPL
Trigger: CAGTGGATACCACCCGCACCACCTGGATCCTGGAGC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTTGAGGGCCTGCTGCTaGGGGTCGATGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPALRACC*GSMQSG
Trigger: CCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGAAGTCTAACTCCTCCTaGGGGACCCTCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEKSNSS*GTLPSA
Trigger: GGCAGAGGGGAGGGTCCCCCAGGAGGAGTTAGACTT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGCTCGTCGTCCGAGATaGAGAAGAACCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEARRPR*RRTWGR
Trigger: CCTTCCCCAGGTTCTTCTTCATCTCGGACGACGAGC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTGCACTGGCGGATGTTaGGCTCATCTGGCTCGCGGT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLCTGGC*AHLARG
Trigger: ACCGCGAGCCAGATGAGCTCAACATCCGCCAGTGCA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGGTGTCTCCCACTGGTaGCATGCCCAGGACGATGTG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLGVSHW*HAQDDV
Trigger: CACATCGTCCTGGGCATGTCACCAGTGGGAGACACC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCCTCCAGGATGGGCATaGCCTCAGCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAPPGWA*PQPELS
Trigger: AGACAGCTCTGGCTGAGGTCATGCCCATCCTGGAGG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCGCTGGTCTCTTGGATaGGGTGCTCCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLRWSLG*GAPSAP
Trigger: AGGAGCAGAGGGAGCACCTCATCCAAGAGACCAGCG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCCTGTACCAGGGCCGTaGGGTAGGACTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPPVPGP*GRTQGC
Trigger: ACATCCCTGAGTCCTACCTCACGGCCCTGGTACAGG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGACCTCCAGGTATCTCTaGTTCACCTGCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAETSRYL*FTCWPL
Trigger: GAGGGGCCAGCAGGTGAAGCAGAGATACCTGGAGGT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCGGCCAGCACCACCATaGCTTGGTACAGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPARPAPP*LGTAAS
Trigger: GGATGCTGCTGTACCAAGGCATGGTGGTGCTGGCCG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTACAGGGAGGGAAGATaGCCTGGCAGTTCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAYREGR*PGSSPG
Trigger: TCCCGGGGAACTGCCAGGGCATCTTCCCTCCCTGTA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCAGCATGCCCAGCCCTaGCTTGCTCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLQHAQP*LAHSLH
Trigger: ATGGAGGCTGTGAGCAAGGCAGGGCTGGGCATGCTG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCATCCAGTTGAGGGCCTaGTGCTGGGGGTCGATGCAG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPIQLRA*CWGSMQ
Trigger: CTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGAT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGCGGAAGTCAGGGTaGGGCTTGGTGATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLRRKSG*GLVILS
Trigger: GGAGAGGATCACCAAGCCGCACCCTGACTTCCGCCT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAGGCGGAAGTCAGGGTaGGGCTTGGTGATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPARRKSG*GLVILS
Trigger: GGAGAGGATCACCAAGCCGCACCCTGACTTCCGCCT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGCCCTACCACCATTGTaGTGTGGCGGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPALPPL*CGGSAW
Trigger: CCATGCTGACCCGCCACACCACAATGGTGGTAGGGC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGCTCGTCCAGCTGGATaGTCGCCTCCTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEARPAG*SPPSAC
Trigger: ACAAGCTGAAGGAGGCGACCATCCAGCTGGACGAGC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGCTGCCAGCTCGTTCTaGATCCTCTCTAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEAASSF*ILSSSR
Trigger: ACGGGAGCTAGAGAGGATCCAGAACGAGCTGGCAGC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCCAGTCGGAAAGGCTaGCTCAGGGGGATGTCGCGA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASSRKG*LRGMSR
Trigger: TCGCGACATCCCCCTGAGCCAGCCTTTCCGACTGGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGGGGTCGATGCAGAGTaGGAAGCGACTGGCCCGGGT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHGVDAE*EATGPG
Trigger: ACCCGGGCCAGTCGCTTCCCACTCTGCATCGACCCC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAAGTCTAACTCCTCCTaGGGGACCCTCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAKSNSS*GTLPSA
Trigger: GGCAGAGGGGAGGGTCCCCCAGGAGGAGTTAGACTT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGAGGCGATGCGTTCCATaGGTGGGATCATCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAERRCVP*VGSSSR
Trigger: ACGAGAGGATGATCCCACTCATGGAACGCATCGCCT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCCCCTGTCACAGCCTTaGGCTCTGGGCCAAATATGT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEPLSQP*ALGQIC
Trigger: ACATATTTGGCCCAGAGCTCAAGGCTGTGACAGGGG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCAGGCTCTTCTTCATaGGGGTTGGGAGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAAGSSS*GLGGSA
Trigger: AGCAGAGCCTCCCAACCCTCATGAAGAAGAGCCTGC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTGGAACGTGGTCAGCTaGTGGATCAGCGCATTGCGG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLWNVVS*WISALR
Trigger: CCGCAATGCGCTGATCCATCAGCTGACCACGTTCCA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGAAGACGCTGAACAGTaGGAGGAATCTGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEEDAEQ*EESGVH
Trigger: GTGGACCCCAGATTCCTCTCACTGTTCAGCGTCTTC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGAGGTGGCCAGGGCATaGACCAATCAATGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAEVARA*TNQCRC
Trigger: ACACCGGCATTGATTGGTTCATGCCCTGGCCACCTC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCCACCTGACGTTTTCTaGGCCCAGCCCAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLPPDVF*AQPRDE
Trigger: CTCATCTCTGGGCTGGGCTCAGAAAACGTCAGGTGG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCAGCTCGCGCAGGAGTaGGTCCTCCAGGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGQLAQE*VLQVLE
Trigger: CTCAAGGACCTGGAGGACTCACTCCTGCGCGAGCTG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTGCAGCTCCAGCAGATaGCCCCACATGTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPCSSSR*PHMSRA
Trigger: AGCTCGAGACATGTGGGGTCATCTGCTGGAGCTGCA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCAGCCAGAGGGCCATTaGCCTGGGGCTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAQPEGH*PGASSS
Trigger: TGAAGAAGAAGCCCCAGGGCAATGGCCCTCTGGCTG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCAGCCAGAGGGCCATTaGCCTGGGGCTTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLQPEGH*PGASSS
Trigger: TGAAGAAGAAGCCCCAGGGCAATGGCCCTCTGGCTG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTATCTCTGCTTCACCTaGTGGCCCCTCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAYLCFT*WPLSLS
Trigger: GGACAGCGAGAGGGGCCAGCAGGTGAAGCAGAGATA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAAGGCCCCACGAATCTaGTCCCGGAGATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPKAPRI*SRRCSA
Trigger: TGCAGAGCATCTCCGGGAGCAGATTCGTGGGGCCTT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCATCCTCCTGCAGGTCTaGGGAGCCTCTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPILLQV*GASLQL
Trigger: GAGCTGAAGAGAGGCTCCGCAGACCTGCAGGAGGAT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCCAGGATCCAGGTGGTaGGGGTGGTATCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAPGSRW*GWYPLC
Trigger: ACACAGTGGATACCACCCGCACCACCTGGATCCTGG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCCAGGATCCAGGTGGTaGGGGTGGTATCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLPGSRW*GWYPLC
Trigger: ACACAGTGGATACCACCCGCACCACCTGGATCCTGG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCGTGGCTCCCCCTCTTaGAGAGCCAACCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHRGSPS*RANRKS
Trigger: GGACTTCCGGTTGGCTCTGCAAGAGGGGGAGCCACG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCCCTCCTCGGCCACGTaGGCGTCTGTGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGPSSAT*ASVNRK
Trigger: CTTCCTGTTCACAGACGCGCACGTGGCCGAGGAGGG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGCCAGGACGATCTTCTaGTCTGCCAGCTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEARTIF*SASFRF
Trigger: GAACCTGAAGCTGGCAGAGCAGAAGATCGTCCTGGC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCCACGAACTTCAGCATaGCCAGCCCTGCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPPRTSA*PALPCS
Trigger: TGAGCAAGGCAGGGCTGGGCATGCTGAAGTTCGTGG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTCCTCCTGCAGTTTCTaGTTCTCCAGGATGGCGGCC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSSCSF*FSRMAA
Trigger: GGCCGCCATCCTGGAGAAGCAGAAACTGCAGGAGGA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAGCTTCACCCGCCGGTaGATTAGCTCATCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASFTRR*ISSSRS
Trigger: CGACCTGGATGAGCTAATGCACCGGCGGGTGAAGCT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGCTTCACCCGCCGGTaGATTAGCTCATCCAGGTCG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSFTRR*ISSSRS
Trigger: CGACCTGGATGAGCTAATGCACCGGCGGGTGAAGCT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCATGCTCAAGCCCAGGTaGTTCCGAACCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAMLKPR*FRTWSR
Trigger: CCTGGACCAGGTTCGGAAGCACCTGGGCTTGAGCAT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCATGCTCAAGCCCAGGTaGTTCCGAACCTGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPMLKPR*FRTWSR
Trigger: CCTGGACCAGGTTCGGAAGCACCTGGGCTTGAGCAT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGACCAAGGGAATGTCTaGCTCCTCCACCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLDQGNV*LLHLHL
Trigger: GAGGTGGAGGTGGAGGAGCCAGACATTCCCTTGGTC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATACGCGGAGCAGCTCCTaGGAGTGGTCATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHTRSSS*EWSSRS
Trigger: GCTCCTGGATGACCACTCCCAGGAGCTGCTCCGCGT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTACCACCGGACCATGTaGTCCACATCCCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAYHRTM*STSLAL
Trigger: AAGGGCCAGGGATGTGGACCACATGGTCCGGTGGTA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGTGCGGTATCGCTCCTaGATGTCCTTGTACCTCAGC +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEVRYRS*MSLYLS
Trigger: GCTGAGGTACAAGGACATCCAGGAGCGATACCGCAC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCGTTCAGGCTCTTCTaGCACTTCTCCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASFRLF*HFSRPS
Trigger: CGAGGGCCTGGAGAAGTGCCAGAAGAGCCTGAACGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCTGTCCAGTCTCGAGTaGTGGGATCCAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAELSSLE*WDPGCH
Trigger: ATGGCATCCTGGATCCCACCACTCGAGACTGGACAG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCCACACAGACTCCTTaGCTGGACCCATCCCGAACT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAATQTP*LDPSRT
Trigger: AGTTCGGGATGGGTCCAGCCAAGGAGTCTGTGTGGC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGCCACACAGACTCCTTaGCTGGACCCATCCCGAACT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLATQTP*LDPSRT
Trigger: AGTTCGGGATGGGTCCAGCCAAGGAGTCTGTGTGGC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCGCCCACCGACTGGTaGACCATGACCACGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSPTDW*TMTTCS
Trigger: GGAGCACGTGGTCATGGTCCACCAGTCGGTGGGCGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCTATGGCTGTGTTGGTaGCGATTTCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAELWLCW*RFPPAG
Trigger: CCCTGCTGGAGGAAATCGCCACCAACACAGCCATAG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGGGACCTCAAGAAGTTaGGGTCGGACATCATGCCCT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEGTSRS*GRTSCP
Trigger: AGGGCATGATGTCCGACCCCAACTTCTTGAGGTCCC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTCTGCTTCTCCAGGATaGCGGCCTCATACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSASPG*RPHTWP
Trigger: GGGCCAAGTATGAGGCCGCCATCCTGGAGAAGCAGA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTTGAGGGCCTGCTGCTaGGGGTCGATGCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGLRACC*GSMQSG
Trigger: CCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCCCAGAATGATGAACTaGCGGCCTTGGGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEPRMMN*RPWEVL
Trigger: CAAGACCTCCCAAGGCCGCCAGTTCATCATTCTGGG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGTTGCCCGTGGACGTaGCCAGCTCGCGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGCCPWT*PARAGV
Trigger: CACTCCTGCGCGAGCTGGCCACGTCCACGGGCAACA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCAGCATGTTGCCCGTaGACGTGGCCAGCTCGCGCA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGPACCP*TWPARA
Trigger: TGCGCGAGCTGGCCACGTCCACGGGCAACATGCTGG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGACCCACAGTGTGTACTaGCTGAACCGCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAETHSVY*LNRLRK
Trigger: CTTCCTGAGGCGGTTCAGCCAGTACACACTGTGGGT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGGAGCTGGAGCACCTaGGAGTTGATGACCCCATAC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPRSWST*ELMTPY
Trigger: GTATGGGGTCATCAACTCTCAGGTGCTCCAGCTCCT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCTGCACATTGGCCGTaGGCATGGACTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAAAHWP*AWTLLL
Trigger: AAGAAGCAGAGTCCATGCTCACGGCCAATGTGCAGC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGCAGGATGGTGTGCTTaGTCCTGTAGAACAGGGATC +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEAGWCA*SCRTGI
Trigger: GATCCCTGTTCTACAGGATCAAGCACACCATCCTGC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCCAGTTCAGGGATGGTaGATCCCAGCTGCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEPVQGW*IPAALS
Trigger: ACTTAGAGCAGCTGGGATTCACCATCCCTGAACTGG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCACTGGACATTCAGGTTaGTCCAGAGGGTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPATGHSG*SRGSGT
Trigger: GGTCCCAGACCCTCTGGATCAACCTGAATGTCCAGT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCGCCCGTTTTCTCCATaGGTTCTTTCCAGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAERPFSP*VLSSVA
Trigger: AGCGACACTGGAAAGAACTCATGGAGAAAACGGGCG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGGTGTCTCCCACTGGTaGCATGCCCAGGACGATGTG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGGVSHW*HAQDDV
Trigger: CACATCGTCCTGGGCATGTCACCAGTGGGAGACACC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGTAAGGATGCCATTCTaGACCGAGAGCTCATCGGGG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPVRMPF*TESSSG
Trigger: CCCCGATGAGCTCTCGGTTCAGAATGGCATCCTTAC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCAGGGTGCGGCTTGGTaGTCCTCTCCAGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGQGAAW*SSPGTS
Trigger: AGAAGTCCCTGGAGAGGATCACCAAGCCGCACCCTG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGGTGGGGTCTGTGGTaGGCCACAGGCGGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGWWGLW*ATGGSQ
Trigger: CTGACTTCCGCCTGTGGCTCACCACAGACCCCACCA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGCTTCCTCCAGATGTaGGGGATGTGCCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSFLQM*GMCPRK
Trigger: CTTCCTTGGGCACATCCCTCACATCTGGAGGAAGCT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGACAGTGTGTACTGGCTaGACCGCCTCAGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAETVCTG*TASGSR
Trigger: TCTACTTCCTGAGGCGGTTCAGCCAGTACACACTGT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCCTGTACCAGGGCCGTaGGGTAGGACTCAGGGATGT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHPVPGP*GRTQGC
Trigger: ACATCCCTGAGTCCTACCTCACGGCCCTGGTACAGG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCCTCAGGCACCAGTATaGGGTAGAAGAACAGCGCAG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAPQAPV*GRRTAQ
Trigger: CTGCGCTGTTCTTCTACCGCATACTGGTGCCTGAGG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGAGATTCTTGGCCAGGTaGTCAATCTCATCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAERFLAR*SISSRR
Trigger: CCTCCGGGATGAGATTGAGCACCTGGCCAAGAATCT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCGGCCAGCACCACCATaGCTTGGTACAGCAGCATCC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGRPAPP*LGTAAS
Trigger: GGATGCTGCTGTACCAAGGCATGGTGGTGCTGGCCG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAAGAGCAGGGCGCAGTaGGCCTGGAGCCGGATGCGC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGKSRAQ*AWSRMR
Trigger: GCGCATCCGGCTCCAGGCGCACTGCGCCCTGCTCTT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTTCAGCTTCTCCCCTTaGCTCCCGTCCACGATCCCC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGFSFSP*LPSTIP
Trigger: GGGGATCGTGGACGGGAGGCAAGGGGAGAAGCTGAA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTACAGGGAGGGAAGATaGCCTGGCAGTTCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHYREGR*PGSSPG
Trigger: TCCCGGGGAACTGCCAGGGCATCTTCCCTCCCTGTA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGTTGCGGCCCCCTCCTaGCTTCCCCATAGCAGCGAT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGVAAPS*LPHSSD
Trigger: ATCGCTGCTATGGGGAAGGCAGGAGGGGGCCGCAAC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAAACGACTTGGCCACTaGATGCAAGGCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAKRLGH*MQGLRW
Trigger: CCACCTCAGGCCTTGCATGCAGTGGCCAAGTCGTTT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCCAGGACGATCTTCTaGTCTGCCAGCTTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAARTIF*SASFRF
Trigger: GAACCTGAAGCTGGCAGAGCAGAAGATCGTCCTGGC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCAGACTGTCTGCACTTaGTTCGGGGGCTTCGCGAAT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPQTVCT*FGGFAN
Trigger: ATTCGCGAAGCCCCCGAAGCAAGTGCAGACAGTCTG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCACTCACAGACTGTCTaGACTTGCTTCGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPHSQTV*TCFGGF
Trigger: GAAGCCCCCGAAGCAAGTGCAGACAGTCTGTGAGTG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCTGCTGGGGGTCGATaGAGAGTGGGAAGCGACTGG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGAAGGR*RVGSDW
Trigger: CCAGTCGCTTCCCACTCTGCATCGACCCCCAGCAGC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGTCTCTTCCAGGGTCTaGACCAGCTCCACATTGTCC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAVSSRV*TSSTLS
Trigger: GGACAATGTGGAGCTGGTGCAGACCCTGGAAGAGAC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGAGAAGAGGAGCTTATaGCTCTCAAACAGCCCGGTG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEEKRSL*LSNSPV
Trigger: CACCGGGCTGTTTGAGAGGCATAAGCTCCTCTTCTC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCGGTCTCCAACAGCTaGAGAGCCACCTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAAVSNS*RATFSW
Trigger: CCAAGAAAAGGTGGCTCTGCAGCTGTTGGAGACCGC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCATCTGGCCCAGCCAGTaGATCACGCACTGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAIWPSQ*ITHCSK
Trigger: TTTGGAGCAGTGCGTGATCCACTGGCTGGGCCAGAT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGAGGGCCATTGCCCTaGGGCTTCTTCTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPRGPLP*GFFFIW
Trigger: CCAGATGAAGAAGAAGCCCCAGGGCAATGGCCCTCT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGCAGAGCGCTCATCATaGAGGGAATGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPAERSS*REWCPG
Trigger: TCCTGGACACCATTCCCTCCATGATGAGCGCTCTGC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCATCGTCGATTCTCTTaGGGTCCCCTGTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLHRRFS*GPLSQP
Trigger: AGGCTGTGACAGGGGACCCCAAGAGAATCGACGATG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGAATTTGTCTTCCTaGAGGGCCACGTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLRNLSS*RATFLA
Trigger: GGCGAGGAACGTGGCCCTCCAGGAAGACAAATTCCT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTGTTGTCAAACTTCTTaGCCTCCTCAGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAECCQTS*PPQAAG
Trigger: CCCAGCTGCCTGAGGAGGCCAAGAAGTTTGACAACA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCCCACGCGCCACACTaGGCAAGGCCAGAGAAGATC +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGPHAPH*ARPEKI
Trigger: GATCTTCTCTGGCCTTGCCCAGTGTGGCGCGTGGGG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGAACTGTCATCTTCTTaGCCAGCGTCTTGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLELSSS*PASWRP
Trigger: TGGGCGCCAAGACGCTGGCCAAGAAGATGACAGTTC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGGATGCGCTCCCCGTTaGCCAAGGTCAACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPGCAPR*PRSTVC
Trigger: ACAAACTGTTGACCTTGGCCAACGGGGAGCGCATCC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTCCAGGATCCAGGTaGTGCGGGTGGTATCCACTG +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHAPGSR*CGWYPL
Trigger: CAGTGGATACCACCCGCACCACCTGGATCCTGGAGC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCTATGGCTGTGTTGGTaGCGATTTCCTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLLWLCW*RFPPAG
Trigger: CCCTGCTGGAGGAAATCGCCACCAACACAGCCATAG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGGGACCTCAAGAAGTTaGGGTCGGACATCATGCCCT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLGTSRS*GRTSCP
Trigger: AGGGCATGATGTCCGACCCCAACTTCTTGAGGTCCC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTGGCGGCCTCATACTTaGCCCCCAGAGCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGWRPHT*PPEPPV
Trigger: AACTGGAGGCTCTGGGGGCCAAGTATGAGGCCGCCA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCACACTCAGCAGCTaGTCCTCTAGGCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSTLSS*SSRPFR
Trigger: TCTGAAGGGCCTAGAGGACCAGCTGCTGAGTGTGCT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGCACACTCAGCAGCTaGTCCTCTAGGCCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSTLSS*SSRPFR
Trigger: TCTGAAGGGCCTAGAGGACCAGCTGCTGAGTGTGCT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCGAGGGTCACGCTGCTaGAAGGCTTTCGTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPRGSRC*KAFVRY
Trigger: GTACCTAACGAAAGCCTTCCAGCAGCGTGACCCTCG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCACCCACAGTGTGTACTaGCTGAACCGCCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPATHSVY*LNRLRK
Trigger: CTTCCTGAGGCGGTTCAGCCAGTACACACTGTGGGT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGCAGGATGGTGTGCTTaGTCCTGTAGAACAGGGATC +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLAGWCA*SCRTGI
Trigger: GATCCCTGTTCTACAGGATCAAGCACACCATCCTGC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCAGGCTCTTCTTCATaGGGGTTGGGAGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHAGSSS*GLGGSA
Trigger: AGCAGAGCCTCCCAACCCTCATGAAGAAGAGCCTGC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTTGCGAGGACAAACTTaGGGTCTTCAAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPLRGQT*GLQGCW
Trigger: CCAGCACCCTTGAAGACCTCAAGTTTGTCCTCGCAA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTTGCGAGGACAAACTTaGGGTCTTCAAGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLLRGQT*GLQGCW
Trigger: CCAGCACCCTTGAAGACCTCAAGTTTGTCCTCGCAA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCGCCCGTTTTCTCCATaGGTTCTTTCCAGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLRPFSP*VLSSVA
Trigger: AGCGACACTGGAAAGAACTCATGGAGAAAACGGGCG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTCGTCGTCCGAGATaGAGAAGAACCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHARRPR*RRTWGR
Trigger: CCTTCCCCAGGTTCTTCTTCATCTCGGACGACGAGC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCGGATTGTCTGGATCTaGGACGAGATGACAGACAGC +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLRIVWI*DEMTDS
Trigger: GCTGTCTGTCATCTCGTCTCAGATCCAGACAATCCG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTGGAACGTGGTCAGCTaGTGGATCAGCGCATTGCGG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGWNVVS*WISALR
Trigger: CCGCAATGCGCTGATCCATCAGCTGACCACGTTCCA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAGCCATGACCAGCACTaGCTTCAGGGCCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSHDQH*LQGPEP
Trigger: GGGCTCCGGGCCCTGAAGTCAGTGCTGGTCATGGCT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGAGGTGGCCAGGGCATaGACCAATCAATGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGEVARA*TNQCRC
Trigger: ACACCGGCATTGATTGGTTCATGCCCTGGCCACCTC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCAGCCCAGAGATaGGCTTGTCCGCTGCGATCA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGSPAQR*ACPLRS
Trigger: TGATCGCAGCGGACAAGCTCATCTCTGGGCTGGGCT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCCACCTGACGTTTTCTaGGCCCAGCCCAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGPPDVF*AQPRDE
Trigger: CTCATCTCTGGGCTGGGCTCAGAAAACGTCAGGTGG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTGGCCAGCTTGGTATTaGGGTACAGCCGGAAATTCG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAWPAWY*GTAGNS
Trigger: CGAATTTCCGGCTGTACCTCAATACCAAGCTGGCCA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGACTGGTACATGGAGTTaGCAAGCGCCATCTCCGACA +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLTGTWS*QAPSPT
Trigger: TGTCGGAGATGGCGCTTGTCAACTCCATGTACCAGT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGGTCCTTCAGCCACTTaGCCAGGAGGTGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGGPSAT*PGGGSS
Trigger: AGAACTGCCACCTCCTGGTCAAGTGGCTGAAGGACC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGACAGTGTGTACTGGCTaGACCGCCTCAGGAAGTAGA +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLTVCTG*TASGSR
Trigger: TCTACTTCCTGAGGCGGTTCAGCCAGTACACACTGT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAAGTGGTTGAGGAAGTaGAAGATGCAGTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAKWLRK*KMQSSA
Trigger: GGCGGAGGACTGCATCTTGCACTTCCTCAACCACTT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCTCCAGGTATCTCTaGTTCACCTGCTGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGTSRYL*FTCWPL
Trigger: GAGGGGCCAGCAGGTGAAGCAGAGATACCTGGAGGT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCATTGGCCAGTTCCTaGCGGTTCTTCTCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAALASS*RFFSCF
Trigger: AAAGCACGAGAAGAACCGGCAGGAACTGGCCAATGC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCCCTCGATACCTTCCTaGAGATACTGGACATTCAGG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEPSIPS*RYWTFR
Trigger: CCTGAATGTCCAGTATCTGCAGGAAGGTATCGAGGG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGGCCCCACGAATCTaGTCCCGGAGATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGKAPRI*SRRCSA
Trigger: TGCAGAGCATCTCCGGGAGCAGATTCGTGGGGCCTT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCACTTGTGGACGGTTTaGAGGAAAGGCCCCACGAAT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPHLWTV*RKGPTN
Trigger: ATTCGTGGGGCCTTTCCTGCAAACCGTCCACAAGTG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAAAATGTCAGCTTCCTaGTCACGCCGCCGATGCTCT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLKMSAS*SRRRCS
Trigger: AGAGCATCGGCGGCGTGAGCAGGAAGCTGACATTTT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAAAATGTCAGCTTCCTaGTCACGCCGCCGATGCTCT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAKMSAS*SRRRCS
Trigger: AGAGCATCGGCGGCGTGAGCAGGAAGCTGACATTTT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGGATGTCTTCATAAATaGGTGGCTCCCCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEGCLHK*VAPPLA
Trigger: TGCAAGAGGGGGAGCCACGCATTTATGAAGACATCC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGACGATCTTCTGCTCTaGCAGCTTCAGGTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPADDLLL*QLQVQL
Trigger: GAGCTGAACCTGAAGCTGGCAGAGCAGAAGATCGTC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGACTTGTCCAGCTTCTaGAGCTCTAGTTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPDLSSF*SSSLAA
Trigger: GGCTGCCAAACTAGAGCTGCAGAAGCTGGACAAGTC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCCACGAACTTCAGCATaGCCAGCCCTGCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHPRTSA*PALPCS
Trigger: TGAGCAAGGCAGGGCTGGGCATGCTGAAGTTCGTGG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCCTCCTGCAGTTTCTaGTTCTCCAGGATGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSSCSF*FSRMAA
Trigger: GGCCGCCATCCTGGAGAAGCAGAAACTGCAGGAGGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCCTCTCCATAATCTCTaGCTCCTCCTGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEPLHNL*LLLQFL
Trigger: CAGAAACTGCAGGAGGAGGCAGAGATTATGGAGAGG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGTCTCTTGGATGAGGTaGTCCCTCTGCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGVSWMR*SLCSSS
Trigger: GCTGGAGGAGCAGAGGGAGCACCTCATCCAAGAGAC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCATTGTCCAGCATGTTaGCCGTGGACGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHHCPAC*PWTWPA
Trigger: AGCTGGCCACGTCCACGGGCAACATGCTGGACAATG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCACCCTCCCCTCTGCCTaGTCTATCTTGATGGTCATG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPTLPSA*SILMVM
Trigger: CATGACCATCAAGATAGAGCAGGCAGAGGGGAGGGT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGACCAAGGGAATGTCTaGCTCCTCCACCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHDQGNV*LLHLHL
Trigger: GAGGTGGAGGTGGAGGAGCCAGACATTCCCTTGGTC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGGTCCTGGCAGATGTTaGCCATGTAGTCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEGPGRC*PCSLFS
Trigger: AGAGAACAGACTACATGGCCAACATCTGCCAGGACC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGGAGGCTCTGCTCTGTaGTCTCCTTCCAATGCTCAT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPGGSAL*SPSNAH
Trigger: ATGAGCATTGGAAGGAGACCACAGAGCAGAGCCTCC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTACCACCGGACCATGTaGTCCACATCCCTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHYHRTM*STSLAL
Trigger: AAGGGCCAGGGATGTGGACCACATGGTCCGGTGGTA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGCTTGGTCCATGATCTaGGTGTTCTGGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEAWSMI*VFWEMS
Trigger: TGACATCTCCCAGAACACCCAGATCATGGACCAAGC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAGCCTGTGGATGTTTTaGGGGATCATGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASLWMF*GIMRAW
Trigger: CCAAGCCCTCATGATCCCCCAAAACATCCACAGGCT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCGCAGGCTGGTTTCTTaGCCGCAAACTTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPARRLVS*PQTSPS
Trigger: TGATGGAGAAGTTTGCGGCCAAGAAACCAGCCTGCG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTGTTGTCAAACTTCTTaGCCTCCTCAGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLCCQTS*PPQAAG
Trigger: CCCAGCTGCCTGAGGAGGCCAAGAAGTTTGACAACA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAATGGTCTGCAGGTCGTaGAGGCGGTTTGGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGMVCRS*RRFGAS
Trigger: TGAGGCCCCAAACCGCCTCCACGACCTGCAGACCAT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTCGTTCAGGCTCTTCTaGCACTTCTCCAGGCCCTCG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSFRLF*HFSRPS
Trigger: CGAGGGCCTGGAGAAGTGCCAGAAGAGCCTGAACGA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTGCCGTAGTTCTTCATaGCCTGCTTGTCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPCRSSS*PACPLA
Trigger: AGCAAGGGGACAAGCAGGCCATGAAGAACTACGGCA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTGCCGTAGTTCTTCATaGCCTGCTTGTCCCCTTGCT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLCRSSS*PACPLA
Trigger: AGCAAGGGGACAAGCAGGCCATGAAGAACTACGGCA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCCCTACCACCATTGTaGTGTGGCGGGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGALPPL*CGGSAW
Trigger: CCATGCTGACCCGCCACACCACAATGGTGGTAGGGC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTCCAGTCTCGAGTGGTaGGATCCAGGATGCCATACA +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSSLEW*DPGCHT
Trigger: TGTATGGCATCCTGGATCCCACCACTCGAGACTGGA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCCAGTCTCGAGTGGTaGGATCCAGGATGCCATACA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASSLEW*DPGCHT
Trigger: TGTATGGCATCCTGGATCCCACCACTCGAGACTGGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGGAACTTGGAAGGGGTaGGAGGCAGATCTTGAACGA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPGTWKG*EADLER
Trigger: TCGTTCAAGATCTGCCTCCCACCCCTTCCAAGTTCC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGTCCCCGAACAGGATaGGATCCCTCATCACCATCT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSPRTG*DPSSPS
Trigger: AGATGGTGATGAGGGATCCCATCCTGTTCGGGGACT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGTCTTCATAAATGCGTaGCTCCCCCTCTTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAVFINA*LPLLQS
Trigger: GCTCTGCAAGAGGGGGAGCCACGCATTTATGAAGAC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCCTCAAACAGTGCCTTaGCGGCCTCGTAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHPQTVP*RPRSPG
Trigger: TCCAGGACTACGAGGCCGCCAAGGCACTGTTTGAGG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTTCAGCTCGTCCAGCTaGATGGTCGCCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGFSSSS*MVASFS
Trigger: GCTGAAGGAGGCGACCATCCAGCTGGACGAGCTGAA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGGCGGCCTCATACTTaGCCCCCAGAGCCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGWRPHT*PPEPPV
Trigger: AACTGGAGGCTCTGGGGGCCAAGTATGAGGCCGCCA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCACTTGACCAGGAGGTaGCAGTTCTGCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAHLTRR*QFCNIS
Trigger: GCTGATGTTGCAGAACTGCCACCTCCTGGTCAAGTG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAACTTCCTCCTCTCCTaGACCACAGCGTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPNFLLS*TTAWKK
Trigger: CTTCTTCCACGCTGTGGTCCAGGAGAGGAGGAAGTT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGAGACCAAACACTTCTaGTGTGTTGGCGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAETKHF*CVGEWE
Trigger: CTCCCACTCGCCAACACACCAGAAGTGTTTGGTCTC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGAGACCAAACACTTCTaGTGTGTTGGCGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPETKHF*CVGEWE
Trigger: CTCCCACTCGCCAACACACCAGAAGTGTTTGGTCTC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAGGAGCTGGAGCACCTaGGAGTTGATGACCCCATAC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHRSWST*ELMTPY
Trigger: GTATGGGGTCATCAACTCTCAGGTGCTCCAGCTCCT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGGAATCCAGCGCATATaGAATCTGGCCCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGGIQRI*NLAQPV
Trigger: CACTGGCTGGGCCAGATTTCATATGCGCTGGATTCC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCACATTGGCCGTaGGCATGGACTCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHAAHWP*AWTLLL
Trigger: AAGAAGCAGAGTCCATGCTCACGGCCAATGTGCAGC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAGGCGATGCGTTCCATaGGTGGGATCATCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHRRCVP*VGSSSR
Trigger: ACGAGAGGATGATCCCACTCATGGAACGCATCGCCT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTCCCCTCTGTATACCTaGGGAATTTGTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAESPLYT*GICLPG
Trigger: TCCAGGAAGACAAATTCCTCAGGTATACAGAGGGGA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTCTGAAGGTACTTCATaGTGTTCACCAGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAESEGTS*CSPAAC
Trigger: ACAGGCTGCTGGTGAACATCATGAAGTACCTTCAGA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATACTGGACATTCAGGTTaGTCCAGAGGGTCTGGGACC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHTGHSG*SRGSGT
Trigger: GGTCCCAGACCCTCTGGATCAACCTGAATGTCCAGT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGATGCTCTGCAAGTTaGCTGTGTTGTCGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPRCSAS*LCCRPS
Trigger: GCTTGGACGACAACACAGTCAACTTGCAGAGCATCT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGATGCTCTGCAAGTTaGCTGTGTTGTCGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLRCSAS*LCCRPS
Trigger: GCTTGGACGACAACACAGTCAACTTGCAGAGCATCT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGGGCGTGGACATCGATaGTCAGGACAGTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPGRGHR*SGQCCI
Trigger: AATACAACACTGTCCTGATCATCGATGTCCACGCCC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCCTCAGAGAAAAGCATaGTCTCACAGATCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEPQRKA*SHRSAA
Trigger: TGCAGCAGATCTGTGAGATCATGCTTTTCTCTGAGG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGTAAGGATGCCATTCTaGACCGAGAGCTCATCGGGG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGVRMPF*TESSSG
Trigger: CCCCGATGAGCTCTCGGTTCAGAATGGCATCCTTAC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAGTCCTCCAGGTCCTTaGGCAGGTTCTTGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSPPGP*AGSCSR
Trigger: GCGAGAACAAGAACCTGCTCAAGGACCTGGAGGACT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGCAGCTCCAGCAGATaGCCCCACATGTCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGCSSSR*PHMSRA
Trigger: AGCTCGAGACATGTGGGGTCATCTGCTGGAGCTGCA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCTTCCTCCAGATGTaGGGGATGTGCCCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSFLQM*GMCPRK
Trigger: CTTCCTTGGGCACATCCCTCACATCTGGAGGAAGCT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTGTAGCTTCAGGCGGTaGCCTTCAGTGGGGATGATC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGCSFRR*PSVGMI
Trigger: GATCATCCCCACTGAAGGTCACCGCCTGAAGCTACA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTGTAGCTTCAGGCGGTaGCCTTCAGTGGGGATGATC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHCSFRR*PSVGMI
Trigger: GATCATCCCCACTGAAGGTCACCGCCTGAAGCTACA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATATCTCTGCTTCACCTaGTGGCCCCTCTCGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGYLCFT*WPLSLS
Trigger: GGACAGCGAGAGGGGCCAGCAGGTGAAGCAGAGATA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGCATCCAGTCCACCCTaGTTCTGTCTTCACAGTATC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPASSPP*FCLHSI
Trigger: GATACTGTGAAGACAGAAGCAGGGTGGACTGGATGC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGATGGATCAGCGCATTaGGGATTGTCTGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPDGSAH*GLSGSE
Trigger: CTCAGATCCAGACAATCCGCAATGCGCTGATCCATC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCATCTCACAGATCTGCTaGAGGTCGGGCACAATGACA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPISQIC*RSGTMT
Trigger: TGTCATTGTGCCCGACCTGCAGCAGATCTGTGAGAT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCATCTCACAGATCTGCTaGAGGTCGGGCACAATGACA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAISQIC*RSGTMT
Trigger: TGTCATTGTGCCCGACCTGCAGCAGATCTGTGAGAT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGATGATCTCACAGATCTaGTGCAGGTCGGGCACAATG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLMISQI*CRSGTM
Trigger: CATTGTGCCCGACCTGCAGCAGATCTGTGAGATCAT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGGATGTCTTCATAAATaGGTGGCTCCCCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAGCLHK*VAPPLA
Trigger: TGCAAGAGGGGGAGCCACGCATTTATGAAGACATCC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACCCTCCTCGGCCACGTaGGCGTCTGTGAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGPSSAT*ASVNRK
Trigger: CTTCCTGTTCACAGACGCGCACGTGGCCGAGGAGGG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAACGACTTGGCCACTaGATGCAAGGCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGKRLGH*MQGLRW
Trigger: CCACCTCAGGCCTTGCATGCAGTGGCCAAGTCGTTT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCTCCTTCCAGACGCTTaGACTGGGCTATGTTGTACT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPLLPDA*TGLCCT
Trigger: AGTACAACATAGCCCAGTGCAAGCGTCTGGAAGGAG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCTCCTTCCAGACGCTTaGACTGGGCTATGTTGTACT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLLLPDA*TGLCCT
Trigger: AGTACAACATAGCCCAGTGCAAGCGTCTGGAAGGAG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCACTCACAGACTGTCTaGACTTGCTTCGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHHSQTV*TCFGGF
Trigger: GAAGCCCCCGAAGCAAGTGCAGACAGTCTGTGAGTG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCCTCTCCATAATCTCTaGCTCCTCCTGCAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLPLHNL*LLLQFL
Trigger: CAGAAACTGCAGGAGGAGGCAGAGATTATGGAGAGG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACATTGTCCAGCATGTTaGCCGTGGACGTGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGHCPAC*PWTWPA
Trigger: AGCTGGCCACGTCCACGGGCAACATGCTGGACAATG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGTCTCTTCCAGGGTCTaGACCAGCTCCACATTGTCC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGVSSRV*TSSTLS
Trigger: GGACAATGTGGAGCTGGTGCAGACCCTGGAAGAGAC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGGTCCGACAGCCAGGTaGATGGTTTCTTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGGPTAR*MVSSTC
Trigger: GCAAGTGGAAGAAACCATGCACCTGGCTGTCGGACC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGGTCCGACAGCCAGGTaGATGGTTTCTTCCACTTGC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHGPTAR*MVSSTC
Trigger: GCAAGTGGAAGAAACCATGCACCTGGCTGTCGGACC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTGGGCGAATTGGGGGTaGTCTGCTCAAAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAWANWG*SAQKWL
Trigger: AAGCCATTTTTGAGCAGAGCACCCCCAATTCGCCCA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTCCTCGTCACTCAAGTaGTTGAGGAAGTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAESSSLK*LRKCKM
Trigger: CATCTTGCACTTCCTCAACCACTTGAGTGACGAGGA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTGACGTTCCACAGTaGACAGGAAGCGCACATTGT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSDVPQ*TGSAHC
Trigger: ACAATGTGCGCTTCCTGTCCACTGTGGAACGTCACT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTCATCATGGAGGGAATaGTGTCCAGGACCACGTGAA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSSWRE*CPGPRE
Trigger: TTCACGTGGTCCTGGACACCATTCCCTCCATGATGA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGCAGAGCGCTCATCATaGAGGGAATGGTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGAERSS*REWCPG
Trigger: TCCTGGACACCATTCCCTCCATGATGAGCGCTCTGC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGATGCGTTCCATGAGTaGGATCATCCTCTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPADAFHE*DHPLVS
Trigger: AGAGACGAGAGGATGATCCCACTCATGGAACGCATC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGGTCCTGGCAGATGTTaGCCATGTAGTCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPGPGRC*PCSLFS
Trigger: AGAGAACAGACTACATGGCCAACATCTGCCAGGACC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCATCGTCGATTCTCTTaGGGTCCCCTGTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGHRRFS*GPLSQP
Trigger: AGGCTGTGACAGGGGACCCCAAGAGAATCGACGATG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGGAATTTGTCTTCCTaGAGGGCCACGTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGRNLSS*RATFLA
Trigger: GGCGAGGAACGTGGCCCTCCAGGAAGACAAATTCCT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAACGCGGAGCAGCTCCTaGGAGTGGTCATCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGTRSSS*EWSSRS
Trigger: GCTCCTGGATGACCACTCCCAGGAGCTGCTCCGCGT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTGTGGTCCACATCCCTaGCCCTTTCTCGTTCAATGT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPACGPHP*PFLVQC
Trigger: ACATTGAACGAGAAAGGGCCAGGGATGTGGACCACA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTGTGGTCCACATCCCTaGCCCTTTCTCGTTCAATGT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPCGPHP*PFLVQC
Trigger: ACATTGAACGAGAAAGGGCCAGGGATGTGGACCACA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCAGCTGCGGACACAGTaGACACACATCTTATCGATC +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLQLRTQ*THILSI
Trigger: GATCGATAAGATGTGTGTCCACTGTGTCCGCAGCTG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGCTTGGTCCATGATCTaGGTGTTCTGGGAGATGTCA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPAWSMI*VFWEMS
Trigger: TGACATCTCCCAGAACACCCAGATCATGGACCAAGC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGACTTCTCCATCACGATaGACTTGTCCAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAETSPSR*TCPASR
Trigger: TCTGGAAGCTGGACAAGTCCATCGTGATGGAGAAGT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAGATCACCCAGGACTTaGCATTTTCTTGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPARSPRT*HFLARC
Trigger: GCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTTTTGTAGATCGCCATaGTGCGGTATCGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAFCRSP*CGIAPG
Trigger: TCCAGGAGCGATACCGCACCATGGCGATCTACAAAA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTTGATCCAGAGGGTCTaGGACCATTCCTCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLLIQRV*DHSSLA
Trigger: TGCCAAAGAGGAATGGTCCCAGACCCTCTGGATCAA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGCAGCGCTTTATCACTaGGTCTTTCAATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPAALYH*VFQCLP
Trigger: GGGGAGACATTGAAAGACCCAGTGATAAAGCGCTGC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGGATGCGCTCCCCGTTaGCCAAGGTCAACAGTTTGT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHGCAPR*PRSTVC
Trigger: ACAAACTGTTGACCTTGGCCAACGGGGAGCGCATCC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCCAGGTGGTGCGGGTaGTATCCACTGTGTGAACCA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSRWCG*YPLCEP
Trigger: TGGTTCACACAGTGGATACCACCCGCACCACCTGGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTCCAGGTGGTGCGGGTaGTATCCACTGTGTGAACCA +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSRWCG*YPLCEP
Trigger: TGGTTCACACAGTGGATACCACCCGCACCACCTGGA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTCCGCTTCTCCACATTaGCTTCCAGATTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAESASPH*LPDFSG
Trigger: TCCAGAGAAATCTGGAAGCCAATGTGGAGAAGCGGA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGCAAGGCCTGAGGTaGCCAGGGCATGAACCAATC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGMQGLR*PGHEPI
Trigger: GATTGGTTCATGCCCTGGCCACCTCAGGCCTTGCAT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATATGCAAGGCCTGAGGTaGCCAGGGCATGAACCAATC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHMQGLR*PGHEPI
Trigger: GATTGGTTCATGCCCTGGCCACCTCAGGCCTTGCAT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCTCGTCCAGCTGGATaGTCGCCTCCTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGARPAG*SPPSAC
Trigger: ACAAGCTGAAGGAGGCGACCATCCAGCTGGACGAGC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATTCAGCTCGTCCAGCTaGATGGTCGCCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGFSSSS*MVASFS
Trigger: GCTGAAGGAGGCGACCATCCAGCTGGACGAGCTGAA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCTGCCAGCTCGTTCTaGATCCTCTCTAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGAASSF*ILSSSR
Trigger: ACGGGAGCTAGAGAGGATCCAGAACGAGCTGGCAGC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCCTCCAGTTCCTTTTaGATCGCTGCCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHASSSF*IAASSF
Trigger: GAACGAGCTGGCAGCGATCCAAAAGGAACTGGAGGC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCTTCCCAAACACCGATaGGGAGTATCTAGGATTGGC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPALPKHR*GVSRIG
Trigger: GCCAATCCTAGATACTCCCCATCGGTGTTTGGGAAG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTTCTCGCTGGTCTCTTaGATGAGGTGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGFSLVS*MRCSLC
Trigger: GCAGAGGGAGCACCTCATCCAAGAGACCAGCGAGAA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCGACAGCCAGGTGCATaGTTTCTTCCACTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLRQPGA*FLPLAL
Trigger: AAGAGCAAGTGGAAGAAACCATGCACCTGGCTGTCG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCGACAGCCAGGTGCATaGTTTCTTCCACTTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPRQPGA*FLPLAL
Trigger: AAGAGCAAGTGGAAGAAACCATGCACCTGGCTGTCG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCACACGATGGGCGAATTaGGGGTGCTCTGCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPTRWAN*GCSAQK
Trigger: TTTTTGAGCAGAGCACCCCCAATTCGCCCATCGTGT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCCATGGTCTCTGGCATaGTTTCCATTGCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAPWSLA*FPLLPS
Trigger: TGAAGGAAGCAATGGAAATCATGCCAGAGACCATGG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATATTGGACACCAGCTCTaGCATGTCTCCCTCCACACT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHIGHQL*HVSLHT
Trigger: AGTGTGGAGGGAGACATGTCAGAGCTGGTGTCCAAT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCCAGTTCAGGGATGGTaGATCCCAGCTGCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGPVQGW*IPAALS
Trigger: ACTTAGAGCAGCTGGGATTCACCATCCCTGAACTGG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTCCCCTCTGTATACCTaGGGAATTTGTCTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSPLYT*GICLPG
Trigger: TCCAGGAAGACAAATTCCTCAGGTATACAGAGGGGA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGCAGTGCTCATCCTTaGTCAGTGGGTGGCGCATCA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGCSAHP*SVGGAS
Trigger: TGATGCGCCACCCACTGATCAAGGATGAGCACTGCA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTACATCCACTTCCTCTaGACCAGCATCCAGATCTCA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPYIHFL*TSIQIS
Trigger: TGAGATCTGGATGCTGGTTCAGAGGAAGTGGATGTA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCTTCACCACAGTTTGTaGCAACACACAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHLHHSL*QHTGGP
Trigger: TGGGCCTCCTGTGTGTTGTCACAAACTGTGGTGAAG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCCTCAGAGAAAAGCATaGTCTCACAGATCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPPQRKA*SHRSAA
Trigger: TGCAGCAGATCTGTGAGATCATGCTTTTCTCTGAGG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTGCCATACAGCTCAATaGCACTCACGGCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHCHTAQ*HSRLWG
Trigger: ACCCCAAAGCCGTGAGTGTCATTGAGCTGTATGGCA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTGCCATACAGCTCAATaGCACTCACGGCTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGCHTAQ*HSRLWG
Trigger: ACCCCAAAGCCGTGAGTGTCATTGAGCTGTATGGCA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGAGGTCTCGGAGGTTaGAGATGTAATGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLRGLGG*RCNGTW
Trigger: CCAAGTTCCATTACATCTTCAACCTCCGAGACCTCT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACCTCCAGGATGGGCATaGCCTCAGCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGPPGWA*PQPELS
Trigger: AGACAGCTCTGGCTGAGGTCATGCCCATCCTGGAGG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAGCCCAGCCCAGAGATaGGCTTGTCCGCTGCGATCA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSPAQR*ACPLRS
Trigger: TGATCGCAGCGGACAAGCTCATCTCTGGGCTGGGCT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACGCTGGTCTCTTGGATaGGGTGCTCCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGRWSLG*GAPSAP
Trigger: AGGAGCAGAGGGAGCACCTCATCCAAGAGACCAGCG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGTCCTCCAGGTCCTTaGGCAGGTTCTTGTTCTCGC +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGSPPGP*AGSCSR
Trigger: GCGAGAACAAGAACCTGCTCAAGGACCTGGAGGACT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCCTCAAGGAAGGCTATaGGGGAGTACTGGTACATGG +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHPQGRL*GSTGTW
Trigger: CCATGTACCAGTACTCCCTCATAGCCTTCCTTGAGG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAAATGGCTTCGAAGCTaGTCATCGGGGGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHKWLRS*SSGAAH
Trigger: ATGTGCAGCCCCCGATGATCAGCTTCGAAGCCATTT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACAGGGTGCGGCTTGGTaGTCCTCTCCAGGGACTTCT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGQGAAW*SSPGTS
Trigger: AGAAGTCCCTGGAGAGGATCACCAAGCCGCACCCTG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCCTGACTCCGATTTGTaGTGGTTGAAGGACAGTGCG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGPDSDL*WLKDSA
Trigger: CGCACTGTCCTTCAACCAGCACAAATCGGAGTCAGG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGAGGGCGCTCAGCGTTaGATTTCTCTCTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHEGAQR*ISLSPE
Trigger: TTCTGGAGAGAGAGAAATGCAACGCTGAGCGCCCTC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTGTAGATCGCCATGGTaGGGTATCGCTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGCRSPW*GIAPGC
Trigger: ACATCCAGGAGCGATACCGCACCATGGCGATCTACA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACAGCATGCCCAGCCCTaGCTTGCTCACAGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGQHAQP*LAHSLH
Trigger: ATGGAGGCTGTGAGCAAGGCAGGGCTGGGCATGCTG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGGACATCTCGAGCTaGTTCAGGAAGTCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGMDISS*FRKSGS
Trigger: TGACCCCGACTTCCTGAAGCAGCTCGAGATGTCCAT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCCTCCCCTCTGCCTaGTCTATCTTGATGGTCATG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGTLPSA*SILMVM
Trigger: CATGACCATCAAGATAGAGCAGGCAGAGGGGAGGGT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTTGGCCTTGACCCATTaGAAGAAACTTGAGACGCGT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPALALTH*KKLETR
Trigger: ACGCGTCTCAAGTTTCTTGCAATGGGTCAAGGCCAA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCGGTCTCCAACAGCTaGAGAGCCACCTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGAVSNS*RATFSW
Trigger: CCAAGAAAAGGTGGCTCTGCAGCTGTTGGAGACCGC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGGAGGTGGCAGTTCTaGAACATCAGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGRRWQF*NISHCP
Trigger: TGGACAGTGGCTGATGTTGCAGAACTGCCACCTCCT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCATAGAGAGGGGGTCATaGAGTCACTTCTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPIERGS*SHFSAL
Trigger: CAAAGCTGAGAAGTGACTCCATGACCCCCTCTCTAT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGAGGGCCATTGCCCTaGGGCTTCTTCTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGRGPLP*GFFFIW
Trigger: CCAGATGAAGAAGAAGCCCCAGGGCAATGGCCCTCT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCACGTATTTCCAGTATaGGGAGGATCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEHVFPV*GGSDAE
Trigger: TTCAGCATCAGATCCTCCCCATACTGGAAATACGTG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGGAGGCTCTGCTCTGTaGTCTCCTTCCAATGCTCAT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGGGSAL*SPSNAH
Trigger: ATGAGCATTGGAAGGAGACCACAGAGCAGAGCCTCC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCGCAGGCTGGTTTCTTaGCCGCAAACTTCTCCATCA +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGRRLVS*PQTSPS
Trigger: TGATGGAGAAGTTTGCGGCCAAGAAACCAGCCTGCG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGGCGCATCACGTCGGTaGCAATCTTGGAGTAGAACT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHGASRR*QSWSRT
Trigger: AGTTCTACTCCAAGATTGCCACCGACGTGATGCGCC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGCTTGTGCAGCTCCATaGCGAACATGTTCTCAAGCG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGACAAP*RTCSQA
Trigger: CGCTTGAGAACATGTTCGCCATGGAGCTGCACAAGC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAACGAGCTTGTTCCATaGAATCCAGTGGTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLNELVP*NPVVPL
Trigger: AAGCGGAACCACTGGATTCCATGGAACAAGCTCGTT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTCCGCTTCTCCACATTaGCTTCCAGATTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSASPH*LPDFSG
Trigger: TCCAGAGAAATCTGGAAGCCAATGTGGAGAAGCGGA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCAGGGACTCCTCCGATaGGAAAGGGACATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHQGLLR*ERDIED
Trigger: GTCTTCAATGTCCCTTTCCCATCGGAGGAGTCCCTG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGATGTAATGGAACTTaGAAGGGGTGGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPRCNGT*KGWEAD
Trigger: ATCTGCCTCCCACCCCTTCCAAGTTCCATTACATCT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCGCCTAAAAACGACTTaGCCACTGCATGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGRLKTT*PLHARP
Trigger: AGGCCTTGCATGCAGTGGCCAAGTCGTTTTTAGGCG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCGCCTAAAAACGACTTaGCCACTGCATGCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHRLKTT*PLHARP
Trigger: AGGCCTTGCATGCAGTGGCCAAGTCGTTTTTAGGCG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTCTTCGATCTCTATaGCCTTCTCCTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHALRSL*PSPLPA
Trigger: AGCTGGCAGAGGAGAAGGCCATAGAGATCGAAGAGC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCCTCCAGTTCCTTTTaGATCGCTGCCAGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGASSSF*IAASSF
Trigger: GAACGAGCTGGCAGCGATCCAAAAGGAACTGGAGGC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCCAGTCGGAAAGGCTaGCTCAGGGGGATGTCGCGA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSSRKG*LRGMSR
Trigger: TCGCGACATCCCCCTGAGCCAGCCTTTCCGACTGGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCCAGAATGATGAACTaGCGGCCTTGGGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGPRMMN*RPWEVL
Trigger: CAAGACCTCCCAAGGCCGCCAGTTCATCATTCTGGG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCTATGAGGGAGTACTaGTACATGGAGTTGACAAGC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAAMREY*YMELTS
Trigger: GCTTGTCAACTCCATGTACCAGTACTCCCTCATAGC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATCTGCAGGATTCCAATaGGGAAGCCCTTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGSAGFQ*GSPWWG
Trigger: ACCCCACCAAGGGCTTCCCCATTGGAATCCTGCAGA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACGAGGGTCACGCTGCTaGAAGGCTTTCGTTAGGTAC +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGRGSRC*KAFVRY
Trigger: GTACCTAACGAAAGCCTTCCAGCAGCGTGACCCTCG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGTGGGAGGGCCTCAATaGCTTCGACAAATTTATCCT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPVGGPQ*LRQIYP
Trigger: AGGATAAATTTGTCGAAGCCATTGAGGCCCTCCCAC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGTGGGAGGGCCTCAATaGCTTCGACAAATTTATCCT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAVGGPQ*LRQIYP
Trigger: AGGATAAATTTGTCGAAGCCATTGAGGCCCTCCCAC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGACTTCATCGGCATCCTaGAACTTGGTCACTTGTGTA +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAETSSAS*NLVTCV
Trigger: TACACAAGTGACCAAGTTCCAGGATGCCGATGAAGT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCGTCGGCATTCTTGTaGATCTGGTGGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSSAFL*IWWTRV
Trigger: AACTCTGGTCCACCAGATTCACAAGAATGCCGACGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTATCGCTTCCACCTCTaGAGGTACTTCATGATGTTC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPYRFHL*RYFMMF
Trigger: GAACATCATGAAGTACCTTCAGAGGTGGAAGCGATA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGGGCGTGGACATCGATaGTCAGGACAGTGTTGTATT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHGRGHR*SGQCCI
Trigger: AATACAACACTGTCCTGATCATCGATGTCCACGCCC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACTTCACCACAGTTTGTaGCAACACACAGGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGLHHSL*QHTGGP
Trigger: TGGGCCTCCTGTGTGTTGTCACAAACTGTGGTGAAG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACGGATTGTCTGGATCTaGGACGAGATGACAGACAGC +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGRIVWI*DEMTDS
Trigger: GCTGTCTGTCATCTCGTCTCAGATCCAGACAATCCG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGGATACTCTTACAGTTaGGTTCTTTCCCACGGTCAT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLGYSYS*VLSHGH
Trigger: ATGACCGTGGGAAAGAACTCAACTGTAAGAGTATCC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTCTGCCACACCTGGTTaGCCATCTCATCACGAAACT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSATPG*PSHHET
Trigger: AGTTTCGTGATGAGATGGTCAACCAGGTGTGGCAGA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCAGCTTCAGCTTCTCTaGAACCTCTGTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGQLQLL*NLCGFG
Trigger: TCCAAAGCCACAGAGGTTTCAGAGAAGCTGAAGCTG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTTTGTGACAGGAGAATaGTGTCTTCCCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHFVTGE*CLPSPG
Trigger: ACCAGGGCTGGGAAGACATCATTCTCCTGTCACAAA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAAATGGCTTCGAAGCTaGTCATCGGGGGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGKWLRS*SSGAAH
Trigger: ATGTGCAGCCCCCGATGATCAGCTTCGAAGCCATTT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGACCTTTTCTTGGCCTTaGCCCATTGCAAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLTFSWP*PIARNL
Trigger: CAAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCACCTTTTCTTGGCCTTaGCCCATTGCAAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPTFSWP*PIARNL
Trigger: CAAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGGAAGTCAGACTCATTaGAGTCATAGTACACGTTCC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPGSQTH*SHSTRS
Trigger: GGAACGTGTACTATGACTTCAATGAGTCTGACTTCC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCATTGGCCAGTTCCTaGCGGTTCTTCTCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGALASS*RFFSCF
Trigger: AAAGCACGAGAAGAACCGGCAGGAACTGGCCAATGC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGGCTGTGCATCTTCTTaGCGTAGTTCTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGGCASS*RSSSWP
Trigger: AGGCCATGAAGAACTACGGCAAGAAGATGCACAGCC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGATGGATCAGCGCATTaGGGATTGTCTGGATCTGAG +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHDGSAH*GLSGSE
Trigger: CTCAGATCCAGACAATCCGCAATGCGCTGATCCATC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAATCCTCCTGCAGGTCTaGGGAGCCTCTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGILLQV*GASLQL
Trigger: GAGCTGAAGAGAGGCTCCGCAGACCTGCAGGAGGAT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCATCATCTAACTCATTaGTCATTCCGACTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPHHLTH*SFRLPQ
Trigger: CTGGGGAAGTCGGAATGAGCAATGAGTTAGATGATG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCCACCAGTTCTGGATTaGACACCAGCTCTGACATGT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHPPVLD*TPALTC
Trigger: ACATGTCAGAGCTGGTGTCCAATCCAGAACTGGTGG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGACCTTCCTAACAAATaGAAGCTTCGTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLDLPNK*KLRLLV
Trigger: TACGAGCAGACGAAGCTTCCATTTGTTAGGAAGGTC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCATCATGGAGGGAATaGTGTCCAGGACCACGTGAA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSSWRE*CPGPRE
Trigger: TTCACGTGGTCCTGGACACCATTCCCTCCATGATGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGATGCGTTCCATGAGTaGGATCATCCTCTCGTCTCT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHDAFHE*DHPLVS
Trigger: AGAGACGAGAGGATGATCCCACTCATGGAACGCATC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGGATCTGATGCTGAATaGATCAAAGCTCAGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAGSDAE*IKAQAF
Trigger: GAAAGCCTGAGCTTTGATCCATTCAGCATCAGATCC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACTTCTTCATGAGGGTTaGGAGGCTCTGCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGLLHEG*EALLCG
Trigger: ACCACAGAGCAGAGCCTCCCAACCCTCATGAAGAAG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTTCACCAGCAGCCTGTaGATGTTTTGGGGGATCATG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGFTSSL*MFWGIM
Trigger: CATGATCCCCCAAAACATCCACAGGCTGCTGGTGAA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTTTTGTAGATCGCCATaGTGCGGTATCGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHFCRSP*CGIAPG
Trigger: TCCAGGAGCGATACCGCACCATGGCGATCTACAAAA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCTTGTGCAGCTCCATaGCGAACATGTTCTCAAGCG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGACAAP*RTCSQA
Trigger: CGCTTGAGAACATGTTCGCCATGGAGCTGCACAAGC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACTTCGAACTGGAACGTaGTCAGCTGATGGATCAGCG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGLRTGT*SADGSA
Trigger: CGCTGATCCATCAGCTGACCACGTTCCAGTTCGAAG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCCTCAAACACAAACTTaGGCAGGTTCATGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGPQTQT*AGSCPA
Trigger: TGCGGGACATGAACCTGCCCAAGTTTGTGTTTGAGG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCCTCAAACACAAACTTaGGCAGGTTCATGTCCCGCA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHPQTQT*AGSCPA
Trigger: TGCGGGACATGAACCTGCCCAAGTTTGTGTTTGAGG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTTTATCCACCTGGACTaGCAGGAGCACATAACCATT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAFIHLD*QEHITI
Trigger: AATGGTTATGTGCTCCTGCCAGTCCAGGTGGATAAA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCATGGTCTCGAACATTTaGACCACTTTATCCACCTGG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPMVSNI*TTLSTW
Trigger: CCAGGTGGATAAAGTGGTCCAAATGTTCGAGACCAT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGTGGCGGGTCAGCATaGTCTCGAACATTTGGACCA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGCGGSA*SRTFGP
Trigger: TGGTCCAAATGTTCGAGACCATGCTGACCCGCCACA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGATATTTAGGTCTGTCTaGGGAACCACCATCTTCAGC +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLIFRSV*GTTIFS
Trigger: GCTGAAGATGGTGGTTCCCCAGACAGACCTAAATAT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGGAACTTGGAAGGGGTaGGAGGCAGATCTTGAACGA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGGTWKG*EADLER
Trigger: TCGTTCAAGATCTGCCTCCCACCCCTTCCAAGTTCC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTGTCTGAAACCGATCTaGATTAGTAAGGACAAGGCC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPCLKPI*ISKDKA
Trigger: GGCCTTGTCCTTACTAATCCAGATCGGTTTCAGACA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGTCCCCGAACAGGATaGGATCCCTCATCACCATCT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGSPRTG*DPSSPS
Trigger: AGATGGTGATGAGGGATCCCATCCTGTTCGGGGACT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACCTCAAACAGTGCCTTaGCGGCCTCGTAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGPQTVP*RPRSPG
Trigger: TCCAGGACTACGAGGCCGCCAAGGCACTGTTTGAGG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAATTCCGCTCCAGCCTaGCCACCTTTTCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGNSAPA*PPFLFW
Trigger: CCAAAAGAGAAAAGGTGGCCAGGCTGGAGCGGAATT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTCTCTAGCTCCCGTTTaGTTAGGAAGAAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSLAPV*LGRNSA
Trigger: AGCGGAATTTCTTCCTAACCAAACGGGAGCTAGAGA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCTGCTTCTCCAGGATaGCGGCCTCATACTTGGCCC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSASPG*RPHTWP
Trigger: GGGCCAAGTATGAGGCCGCCATCCTGGAGAAGCAGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCTTCCCAAACACCGATaGGGAGTATCTAGGATTGGC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGLPKHR*GVSRIG
Trigger: GCCAATCCTAGATACTCCCCATCGGTGTTTGGGAAG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAACCTCTGTGGCTTTaGACTTGGTCTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGKPLWL*TWSLPG
Trigger: CCCTGGAAGAGACCAAGTCCAAAGCCACAGAGGTTT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTCTCTGAAACCTCTGTaGCTTTGGACTTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSLKPL*LWTWSL
Trigger: AAGAGACCAAGTCCAAAGCCACAGAGGTTTCAGAGA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATACACGATGGGCGAATTaGGGGTGCTCTGCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHTRWAN*GCSAQK
Trigger: TTTTTGAGCAGAGCACCCCCAATTCGCCCATCGTGT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCATCTCGGCATTGGAATaGAGACCAAACACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAISALE*RPNTSG
Trigger: ACCAGAAGTGTTTGGTCTCCATTCCAATGCCGAGAT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAGCCAATCTCGGCATTaGAATGGAGACCAAACACTT +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASQSRH*NGDQTL
Trigger: AAGTGTTTGGTCTCCATTCCAATGCCGAGATTGGCT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCACTTCATCGGCATCCTaGAACTTGGTCACTTGTGTA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPTSSAS*NLVTCV
Trigger: TACACAAGTGACCAAGTTCCAGGATGCCGATGAAGT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGACCTGCAGAACATCTaGAAGGTCCTGGCAGATGTT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGDLQNI*KVLADV
Trigger: AACATCTGCCAGGACCTTTCAGATGTTCTGCAGGTC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACCCCTGTCACAGCCTTaGGCTCTGGGCCAAATATGT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGPLSQP*ALGQIC
Trigger: ACATATTTGGCCCAGAGCTCAAGGCTGTGACAGGGG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATCGTCGGCATTCTTGTaGATCTGGTGGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGSSAFL*IWWTRV
Trigger: AACTCTGGTCCACCAGATTCACAAGAATGCCGACGA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATGCAGTGCTCATCCTTaGTCAGTGGGTGGCGCATCA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGCSAHP*SVGGAS
Trigger: TGATGCGCCACCCACTGATCAAGGATGAGCACTGCA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTTTGGACCTGATCTCTaGAATTGTTGCGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAFGPDL*NCCEDK
Trigger: TTTGTCCTCGCAACAATTTCAGAGATCAGGTCCAAA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGAAGACGCTGAACAGTaGGAGGAATCTGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGEDAEQ*EESGVH
Trigger: GTGGACCCCAGATTCCTCTCACTGTTCAGCGTCTTC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAGAGGTCTCGGAGGTTaGAGATGTAATGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHRGLGG*RCNGTW
Trigger: CCAAGTTCCATTACATCTTCAACCTCCGAGACCTCT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATTTGTGACAGGAGAATaGTGTCTTCCCAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGFVTGE*CLPSPG
Trigger: ACCAGGGCTGGGAAGACATCATTCTCCTGTCACAAA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCTTGCCATACAGTTTaGTGTAGGTCTCTACATCTG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASCHTV*CRSLHL
Trigger: CAGATGTAGAGACCTACAGCAAACTGTATGGCAAGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTCTTGCCATACAGTTTaGTGTAGGTCTCTACATCTG +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSCHTV*CRSLHL
Trigger: CAGATGTAGAGACCTACAGCAAACTGTATGGCAAGA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAATTCTTCCAAGACCTaGAGAACATCTGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPANSSKT*RTSERS
Trigger: GGACCTTTCAGATGTTCTGCAGGTCTTGGAAGAATT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCCCGGGAGCGGATATaGTTGAATTTTAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSRERI*LNFSSM
Trigger: CATGCTGCTAAAATTCAAGCATATCCGCTCCCGGGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058440.12
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGGGTTGTCCTGGTTCTaGACAAAGATCTTATTAACG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAGLSWF*TKILLT
Trigger: CGTTAATAAGATCTTTGTGCAGAACCAGGACAACCC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGGCTGTGCATCTTCTTaGCGTAGTTCTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGGCASS*RSSSWP
Trigger: AGGCCATGAAGAACTACGGCAAGAAGATGCACAGCC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAATGATCTCACAGATCTaGTGCAGGTCGGGCACAATG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGMISQI*CRSGTM
Trigger: CATTGTGCCCGACCTGCAGCAGATCTGTGAGATCAT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACAGACTGTCTGCACTTaGTTCGGGGGCTTCGCGAAT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGQTVCT*FGGFAN
Trigger: ATTCGCGAAGCCCCCGAAGCAAGTGCAGACAGTCTG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTTGGCCTTGACCCATTaGAAGAAACTTGAGACGCGT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHLALTH*KKLETR
Trigger: ACGCGTCTCAAGTTTCTTGCAATGGGTCAAGGCCAA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCCACATGTCTCGAGCTaGCTGTGTGTAATAGCCAAT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHPHVSS*LCVIAN
Trigger: ATTGGCTATTACACACAGGCAGCTCGAGACATGTGG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCCTCGTCACTCAAGTaGTTGAGGAAGTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSSSLK*LRKCKM
Trigger: CATCTTGCACTTCCTCAACCACTTGAGTGACGAGGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATTCACCAGCAGCCTGTaGATGTTTTGGGGGATCATG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGFTSSL*MFWGIM
Trigger: CATGATCCCCCAAAACATCCACAGGCTGCTGGTGAA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGTGCGGTATCGCTCCTaGATGTCCTTGTACCTCAGC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGVRYRS*MSLYLS
Trigger: GCTGAGGTACAAGGACATCCAGGAGCGATACCGCAC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCCTTCCTGCAGATACTaGACATTCAGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGPSCRY*TFRLIQ
Trigger: CTGGATCAACCTGAATGTCCAGTATCTGCAGGAAGG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGAACTGTCATCTTCTTaGCCAGCGTCTTGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGELSSS*PASWRP
Trigger: TGGGCGCCAAGACGCTGGCCAAGAAGATGACAGTTC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAACGAGCTTGTTCCATaGAATCCAGTGGTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHNELVP*NPVVPL
Trigger: AAGCGGAACCACTGGATTCCATGGAACAAGCTCGTT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAGATGTAATGGAACTTaGAAGGGGTGGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHRCNGT*KGWEAD
Trigger: ATCTGCCTCCCACCCCTTCCAAGTTCCATTACATCT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAGTCTAGGTAGTTCTTaGGCGTCACATAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSLGSS*ASHSCS
Trigger: GGAGCAACTATGTGACGCCCAAGAACTACCTAGACT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCCATCTCTTCGATTGTaGTGTTCAGAGTCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPPSLRL*CSESLG
Trigger: TCCTAAAGACTCTGAACACCACAATCGAAGAGATGG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATTCTCGCTGGTCTCTTaGATGAGGTGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGFSLVS*MRCSLC
Trigger: GCAGAGGGAGCACCTCATCCAAGAGACCAGCGAGAA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAAACCTCTGTGGCTTTaGACTTGGTCTCTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGKPLWL*TWSLPG
Trigger: CCCTGGAAGAGACCAAGTCCAAAGCCACAGAGGTTT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGATTTCCATACAGACCTaGAAGTCAGACTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEISIQT*KSDSLK
Trigger: CTTCAATGAGTCTGACTTCCAGGTCTGTATGGAAAT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCCAGAACTTCAAGCTTaGAGTCCTCCATCACGTATT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHPELQA*SPPSRI
Trigger: AATACGTGATGGAGGACTTCAAGCTTGAAGTTCTGG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058440.12
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATACATCCACTTCCTCTaGACCAGCATCCAGATCTCA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGYIHFL*TSIQIS
Trigger: TGAGATCTGGATGCTGGTTCAGAGGAAGTGGATGTA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTGTTATCATACATCTTaGTCATATGCTCTTGCACGC +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLCYHTS*SYALAR
Trigger: GCGTGCAAGAGCATATGATCAAGATGTATGATAACA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGGATACTCTTACAGTTaGGTTCTTTCCCACGGTCAT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGGYSYS*VLSHGH
Trigger: ATGACCGTGGGAAAGAACTCAACTGTAAGAGTATCC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTGCCACATGGGGAGATaGTGTTCAATATCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHCHMGR*CSISRG
Trigger: TCCTCTTGATATTGAACATCATCTCCCCATGTGGCA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTGTCATTGGAAATCTTaGAATAGGTTGCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAECHWKS*NRLLSC
Trigger: ACATGAGAGCAACCTATTTCAAGATTTCCAATGACA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGGAAGTCAGACTCATTaGAGTCATAGTACACGTTCC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHGSQTH*SHSTRS
Trigger: GGAACGTGTACTATGACTTCAATGAGTCTGACTTCC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAAGTGGTTGAGGAAGTaGAAGATGCAGTCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGKWLRK*KMQSSA
Trigger: GGCGGAGGACTGCATCTTGCACTTCCTCAACCACTT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAAAACCACATTCTGTTaGAAAAACTCCTCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLKTTFC*KNSSGR
Trigger: TCTTCCCGAGGAGTTTTTGCAACAGAATGTGGTTTT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACCTGACTCCGATTTGTaGTGGTTGAAGGACAGTGCG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGPDSDL*WLKDSA
Trigger: CGCACTGTCCTTCAACCAGCACAAATCGGAGTCAGG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGAGGGCGCTCAGCGTTaGATTTCTCTCTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGEGAQR*ISLSPE
Trigger: TTCTGGAGAGAGAGAAATGCAACGCTGAGCGCCCTC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATGTAGATCGCCATGGTaGGGTATCGCTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGCRSPW*GIAPGC
Trigger: ACATCCAGGAGCGATACCGCACCATGGCGATCTACA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTGTAAAGTGTTAATGTaGAAAATGTCAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAECKVLM*KMSASC
Trigger: GCAGGAAGCTGACATTTTGCACATTAACACTTTACA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGACTTGTCCAGCTTCTaGAGCTCTAGTTTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGDLSSF*SSSLAA
Trigger: GGCTGCCAAACTAGAGCTGCAGAAGCTGGACAAGTC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATGGGGTCGGACATCATaGCCTTGGCAGTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGWGRTS*PWQFSS
Trigger: ACTGGAAAACTGCCAAGGGCATGATGTCCGACCCCA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAGGAGGTGGCAGTTCTaGAACATCAGCCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGRRWQF*NISHCP
Trigger: TGGACAGTGGCTGATGTTGCAGAACTGCCACCTCCT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCACGTATTTCCAGTATaGGGAGGATCTGATGCTGAA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHHVFPV*GGSDAE
Trigger: TTCAGCATCAGATCCTCCCCATACTGGAAATACGTG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACTTCTTCATGAGGGTTaGGAGGCTCTGCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGLLHEG*EALLCG
Trigger: ACCACAGAGCAGAGCCTCCCAACCCTCATGAAGAAG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGAATTCTTTTACACCTaGGACCCCATCCGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHEFFYT*DPIRSF
Trigger: AAAACTGCGGATGGGGTCCCAGGTGTAAAAGAATTC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGAATTCTTTTACACCTaGGACCCCATCCGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGEFFYT*DPIRSF
Trigger: AAAACTGCGGATGGGGTCCCAGGTGTAAAAGAATTC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAAGATGGTTTCCGCTTaGAACAGAGGGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHKMVSA*NRGTFL
Trigger: CAGAAATGTCCCTCTGTTCCAAGCGGAAACCATCTT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAGCCTGTGGATGTTTTaGGGGATCATGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSLWMF*GIMRAW
Trigger: CCAAGCCCTCATGATCCCCCAAAACATCCACAGGCT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCTTCCTGCAGATACTaGACATTCAGGTTGATCCAG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGPSCRY*TFRLIQ
Trigger: CTGGATCAACCTGAATGTCCAGTATCTGCAGGAAGG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACTTCGAACTGGAACGTaGTCAGCTGATGGATCAGCG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGLRTGT*SADGSA
Trigger: CGCTGATCCATCAGCTGACCACGTTCCAGTTCGAAG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTTTTTGAGGAAGTTCTaGGTAGTGGCTGTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAFLRKF*VVAVLE
Trigger: TTCTAAGACAGCCACTACCCAGAACTTCCTCAAAAA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCATACTCATCCACCTTTaGCATGTTCATGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPILIHL*HVHVIH
Trigger: ATGGATGACATGAACATGCCAAAGGTGGATGAGTAT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACAGGGACTCCTCCGATaGGAAAGGGACATTGAAGAC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGQGLLR*ERDIED
Trigger: GTCTTCAATGTCCCTTTCCCATCGGAGGAGTCCCTG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTGTGACCCTTCAGAATaGAGTAGTAGATCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPACDPSE*SSRSSS
Trigger: TGAACTTGATCTACTACTCCATTCTGAAGGGTCACA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTGTGACCCTTCAGAATaGAGTAGTAGATCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPCDPSE*SSRSSS
Trigger: TGAACTTGATCTACTACTCCATTCTGAAGGGTCACA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTGTCTGAAACCGATCTaGATTAGTAAGGACAAGGCC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGCLKPI*ISKDKA
Trigger: GGCCTTGTCCTTACTAATCCAGATCGGTTTCAGACA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGTCTTCATAAATGCGTaGCTCCCCCTCTTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGVFINA*LPLLQS
Trigger: GCTCTGCAAGAGGGGGAGCCACGCATTTATGAAGAC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGTCTAGGTAGTTCTTaGGCGTCACATAGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGSLGSS*ASHSCS
Trigger: GGAGCAACTATGTGACGCCCAAGAACTACCTAGACT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCTCTAGCTCCCGTTTaGTTAGGAAGAAATTCCGCT +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSLAPV*LGRNSA
Trigger: AGCGGAATTTCTTCCTAACCAAACGGGAGCTAGAGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTCTCTGAAACCTCTGTaGCTTTGGACTTGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSLKPL*LWTWSL
Trigger: AAGAGACCAAGTCCAAAGCCACAGAGGTTTCAGAGA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACACTTGACCAGGAGGTaGCAGTTCTGCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGHLTRR*QFCNIS
Trigger: GCTGATGTTGCAGAACTGCCACCTCCTGGTCAAGTG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAACTTCCTCCTCTCCTaGACCACAGCGTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGNFLLS*TTAWKK
Trigger: CTTCTTCCACGCTGTGGTCCAGGAGAGGAGGAAGTT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCATTTCCATACAGACCTaGAAGTCAGACTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPISIQT*KSDSLK
Trigger: CTTCAATGAGTCTGACTTCCAGGTCTGTATGGAAAT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCCGGAAGAAGTGGAATaGTTGAAAAGTATCGAAGAT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPPEEVE*LKSIED
Trigger: ATCTTCGATACTTTTCAACCATTCCACTTCTTCCGG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCCAATCTCGGCATTaGAATGGAGACCAAACACTT +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSQSRH*NGDQTL
Trigger: AAGTGTTTGGTCTCCATTCCAATGCCGAGATTGGCT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGACCTGCAGAACATCTaGAAGGTCCTGGCAGATGTT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGDLQNI*KVLADV
Trigger: AACATCTGCCAGGACCTTTCAGATGTTCTGCAGGTC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTTGACGAGAGGCGTTTaGTACACTCATCAAACTTCA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHLTRGV*YTHQTS
Trigger: TGAAGTTTGATGAGTGTATCAAACGCCTCTCGTCAA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCTGCCACACCTGGTTaGCCATCTCATCACGAAACT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSATPG*PSHHET
Trigger: AGTTTCGTGATGAGATGGTCAACCAGGTGTGGCAGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACAGCTTCAGCTTCTCTaGAACCTCTGTGGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGQLQLL*NLCGFG
Trigger: TCCAAAGCCACAGAGGTTTCAGAGAAGCTGAAGCTG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTGTCATTGGAAATCTTaGAATAGGTTGCTCTCATGT +
Preference number: 4 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLCHWKS*NRLLSC
Trigger: ACATGAGAGCAACCTATTTCAAGATTTCCAATGACA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAAGAAGTGGAATGGTTaGAAAGTATCGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAKKWNG*KVSKMK
Trigger: CTTCATCTTCGATACTTTTCAACCATTCCACTTCTT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGTTTTACAATTTTCTTaGCATACAGTTTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEVLQFS*HTVCCR
Trigger: CCTACAGCAAACTGTATGGCAAGAAAATTGTAAAAC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAATTCTTCCAAGACCTaGAGAACATCTGAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGNSSKT*RTSERS
Trigger: GGACCTTTCAGATGTTCTGCAGGTCTTGGAAGAATT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCACAAAAAGAACAGGGTaGTTGATTTTAACCATCTGC +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPATKRTG*LILTIC
Trigger: GCAGATGGTTAAAATCAAGCACCCTGTTCTTTTTGT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTGTAAAGTGTTAATGTaGAAAATGTCAGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPCKVLM*KMSASC
Trigger: GCAGGAAGCTGACATTTTGCACATTAACACTTTACA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATGGGCGAATTGGGGGTaGTCTGCTCAAAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGWANWG*SAQKWL
Trigger: AAGCCATTTTTGAGCAGAGCACCCCCAATTCGCCCA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGTAGGTCTCTACATCTaGCTCTTCGTCATCCATATC +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGVGLYI*LFVIHI
Trigger: GATATGGATGACGAAGAGCCAGATGTAGAGACCTAC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACCACCAGTTCTGGATTaGACACCAGCTCTGACATGT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGPPVLD*TPALTC
Trigger: ACATGTCAGAGCTGGTGTCCAATCCAGAACTGGTGG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGACCTTCCTAACAAATaGAAGCTTCGTCTGCTCGTA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGDLPNK*KLRLLV
Trigger: TACGAGCAGACGAAGCTTCCATTTGTTAGGAAGGTC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAAGATGGTTTCCGCTTaGAACAGAGGGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGKMVSA*NRGTFL
Trigger: CAGAAATGTCCCTCTGTTCCAAGCGGAAACCATCTT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACAGCTGCGGACACAGTaGACACACATCTTATCGATC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGQLRTQ*THILSI
Trigger: GATCGATAAGATGTGTGTCCACTGTGTCCGCAGCTG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAGATCACCCAGGACTTaGCATTTTCTTGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGRSPRT*HFLARC
Trigger: GCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAATGGTCTCGAACATTTaGACCACTTTATCCACCTGG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGMVSNI*TTLSTW
Trigger: CCAGGTGGATAAAGTGGTCCAAATGTTCGAGACCAT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCCATTTCTTCCAGTATaGTTGGTATTTCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPPFLPV*LVFQVL
Trigger: AAGAACCTGAAATACCAACCATACTGGAAGAAATGG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAATTCCGCTCCAGCCTaGCCACCTTTTCTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGNSAPA*PPFLFW
Trigger: CCAAAAGAGAAAAGGTGGCCAGGCTGGAGCGGAATT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAACCACTCCTGCCACATaGGGAGATGATGTTCAATAT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGTTPAT*GDDVQY
Trigger: ATATTGAACATCATCTCCCCATGTGGCAGGAGTGGT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACCATGGTCTCTGGCATaGTTTCCATTGCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGPWSLA*FPLLPS
Trigger: TGAAGGAAGCAATGGAAATCATGCCAGAGACCATGG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCTGAAGGTACTTCATaGTGTTCACCAGCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSEGTS*CSPAAC
Trigger: ACAGGCTGCTGGTGAACATCATGAAGTACCTTCAGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATTTGGACCTGATCTCTaGAATTGTTGCGAGGACAAA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGFGPDL*NCCEDK
Trigger: TTTGTCCTCGCAACAATTTCAGAGATCAGGTCCAAA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTGTTATCATACATCTTaGTCATATGCTCTTGCACGC +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHCYHTS*SYALAR
Trigger: GCGTGCAAGAGCATATGATCAAGATGTATGATAACA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGTCGGAAAACTTTTGTaGCAGGAGAATGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGVGKLL*QENDVF
Trigger: GAAGACATCATTCTCCTGTCACAAAAGTTTTCCGAC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGTTTTACAATTTTCTTaGCATACAGTTTGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPVLQFS*HTVCCR
Trigger: CCTACAGCAAACTGTATGGCAAGAAAATTGTAAAAC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAATCTTGAAATAGGTTaGTCTCATGTTCAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: PPEIQSPILRKCQLLWPANLEIG*SHVQFE
Trigger: CTCAAACTGAACATGAGAGCAACCTATTTCAAGATT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTTTTTGAGGAAGTTCTaGGTAGTGGCTGTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHFLRKF*VVAVLE
Trigger: TTCTAAGACAGCCACTACCCAGAACTTCCTCAAAAA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCATCTCTTCGATTGTaGTGTTCAGAGTCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGPSLRL*CSESLG
Trigger: TCCTAAAGACTCTGAACACCACAATCGAAGAGATGG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGCTATGAGGGAGTACTaGTACATGGAGTTGACAAGC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGAMREY*YMELTS
Trigger: GCTTGTCAACTCCATGTACCAGTACTCCCTCATAGC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATATCGCTTCCACCTCTaGAGGTACTTCATGATGTTC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGYRFHL*RYFMMF
Trigger: GAACATCATGAAGTACCTTCAGAGGTGGAAGCGATA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACTAAAGATTTGGACCTaGTCTCTGAAATTGTTGCGA +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGLKIWT*SLKLLR
Trigger: TCGCAACAATTTCAGAGATCAGGTCCAAATCTTTAG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATGCCACATGGGGAGATaGTGTTCAATATCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGCHMGR*CSISRG
Trigger: TCCTCTTGATATTGAACATCATCTCCCCATGTGGCA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACAAAAAGAACAGGGTaGTTGATTTTAACCATCTGC +
Preference number: 4 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGTKRTG*LILTIC
Trigger: GCAGATGGTTAAAATCAAGCACCCTGTTCTTTTTGT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACATCATCTAACTCATTaGTCATTCCGACTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGHHLTH*SFRLPQ
Trigger: CTGGGGAAGTCGGAATGAGCAATGAGTTAGATGATG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGTAGGTCTCTACATCTaGCTCTTCGTCATCCATATC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGVGLYI*LFVIHI
Trigger: GATATGGATGACGAAGAGCCAGATGTAGAGACCTAC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATTTATCCACCTGGACTaGCAGGAGCACATAACCATT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGFIHLD*QEHITI
Trigger: AATGGTTATGTGCTCCTGCCAGTCCAGGTGGATAAA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATTCTTCCAGTATGGTTaGTATTTCAGGTTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGFFQYG*YFRFLG
Trigger: CCCTAAGAACCTGAAATACCAACCATACTGGAAGAA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAACATCCTGGTTAACTaGGTCACCATATTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGNILVN*VTIFRS
Trigger: AGACCTAAATATGGTGACCCAGTTAACCAGGATGTT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAATACTCATCCACCTTTaGCATGTTCATGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGILIHL*HVHVIH
Trigger: ATGGATGACATGAACATGCCAAAGGTGGATGAGTAT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAATCTCGGCATTGGAATaGAGACCAAACACTTCTGGT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGISALE*RPNTSG
Trigger: ACCAGAAGTGTTTGGTCTCCATTCCAATGCCGAGAT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGTCGGAAAACTTTTGTaGCAGGAGAATGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGVGKLL*QENDVF
Trigger: GAAGACATCATTCTCCTGTCACAAAAGTTTTCCGAC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCAGAACTTCAAGCTTaGAGTCCTCCATCACGTATT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSELQA*SPPSRI
Trigger: AATACGTGATGGAGGACTTCAAGCTTGAAGTTCTGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTTGTCCTGGTTCTaGACAAAGATCTTATTAACG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGGLSWF*TKILLT
Trigger: CGTTAATAAGATCTTTGTGCAGAACCAGGACAACCC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCATTTCTTCCAGTATaGTTGGTATTTCAGGTTCTT +
Preference number: 4 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGPFLPV*LVFQVL
Trigger: AAGAACCTGAAATACCAACCATACTGGAAGAAATGG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACTAAAGATTTGGACCTaGTCTCTGAAATTGTTGCGA +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGLKIWT*SLKLLR
Trigger: TCGCAACAATTTCAGAGATCAGGTCCAAATCTTTAG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACTCCTTGTAGTACTGTaGCAGGATGTCATTAAACTT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGLLVVL*QDVIKL
Trigger: AAGTTTAATGACATCCTGGCACAGTACTACAAGGAG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000058440.12
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATTCTTCCAGTATGGTTaGTATTTCAGGTTCTTAGGG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGFFQYG*YFRFLG
Trigger: CCCTAAGAACCTGAAATACCAACCATACTGGAAGAA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAACATCCTGGTTAACTaGGTCACCATATTTAGGTCT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGNILVN*VTIFRS
Trigger: AGACCTAAATATGGTGACCCAGTTAACCAGGATGTT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACCGGAAGAAGTGGAATaGTTGAAAAGTATCGAAGAT +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGPEEVE*LKSIED
Trigger: ATCTTCGATACTTTTCAACCATTCCACTTCTTCCGG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR TCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAAGAAGTGGAATGGTTaGAAAGTATCGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGKKWNG*KVSKMK
Trigger: CTTCATCTTCGATACTTTTCAACCATTCCACTTCTT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR GCA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAATCTTGAAATAGGTTaGTCTCATGTTCAGTTTGAG +
Preference number: 4 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGNLEIG*SHVQFE
Trigger: CTCAAACTGAACATGAGAGCAACCTATTTCAAGATT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp AACACCTCACAGCCTGCGGTGAAGGCCGCCAGCCTAGCCAACGACTaGTTCCCGGAGCCACCCACACCCACCAGCAATGCGTGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: NTSQPAVKAASLAND*FPEPPTPTSNAWPR
Trigger: CCGAGGCCACGCATTGCTGGTGGGTGTGGGTGGCTCCGGGAAGCAGTCGTTGGCTAGGCTGGCGGCCTTCACCGCAGGCTGTGAGGTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GGCAGGTTCATGTCCCGCAGCGCCCGCATCAGGACGACATCCTCCTaGAGGTCTGCGGAGCCTCTCTTCAGCTCACCAGCCATGACCAGC +
Preference number: 5 (lower is better)
Translates to: GRFMSRSARIRTTSS*RSAEPLFSSPAMTS
Trigger: GCTGGTCATGGCTGGTGAGCTGAAGAGAGGCTCCGCAGACCTGCAGGAGGATGTCGTCCTGATGCGGGCGCTGCGGGACATGAACCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GGGGAGGCGTATTGCAGGTCTCCAACCTCAAAGAGCAGGGCGCAGTaGGCCTGGAGCCGGATGCGCTCCCCGTTGGCCAAGGTCAACAGT +
Preference number: 5 (lower is better)
Translates to: GEAYCRSPTSKSRAQ*AWSRMRSPLAKVNS
Trigger: ACTGTTGACCTTGGCCAACGGGGAGCGCATCCGGCTCCAGGCGCACTGCGCCCTGCTCTTTGAGGTTGGAGACCTGCAATACGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CATCTCCGACAGCACGAAGAACAGAATGGCGCCCCGTCTCGCGGCTaGCCGGTAGCCGTCCCGCAGCCTGTCAATGTCCAGGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: HLRQHEEQNGAPSRG*PVAVPQPVNVQGCL
Trigger: AAGACAGCCCTGGACATTGACAGGCTGCGGGACGGCTACCGGCCAGCCGCGAGACGGGGCGCCATTCTGTTCTTCGTGCTGTCGGAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp CCAGGTAGTCGTTCAGGCTCTTCTGGCACTTCTCCAGGCCCTCGCTaGTGGTCTGCAGGTCGTGGAGGCGGTTTGGGGCCTCACAGCAGC +
Preference number: 5 (lower is better)
Translates to: PGSRSGSSGTSPGPR*WSAGRGGGLGPHSS
Trigger: GCTGCTGTGAGGCCCCAAACCGCCTCCACGACCTGCAGACCATCAGCGAGGGCCTGGAGAAGTGCCAGAAGAGCCTGAACGACTACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp CCAACGGCCAGCCATTCCTCCGGCATGTGGCCTGTACCAGGGCCGTaGGGTAGGACTCAGGGATGTGCAGCCCAGAGAGCCACATCACAC +
Preference number: 5 (lower is better)
Translates to: PTASHSSGMWPVPGP*GRTQGCAAQRATSH
Trigger: GTGTGATGTGGCTCTCTGGGCTGCACATCCCTGAGTCCTACCTCACGGCCCTGGTACAGGCCACATGCCGGAGGAATGGCTGGCCGTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGGTCGTGGAGGCGGTTaGGGGCCTCACAGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEGRGGG*GPHSSA
Trigger: AGCGCTGCTGTGAGGCCCCAAACCGCCTCCACGACC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GGCTGTGTTGGTGGCGATTTCCTCCAGCAGGGCCTCGCAGGCGGCTaGCTTCTCGGCCAGGACGATCTTCTGCTCTGCCAGCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: GCVGGDFLQQGLAGG*LLGQDDLLLCQLQV
Trigger: AACCTGAAGCTGGCAGAGCAGAAGATCGTCCTGGCCGAGAAGTCAGCCGCCTGCGAGGCCCTGCTGGAGGAAATCGCCACCAACACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TCTTGCACGGTGCTGGCCAAGGGCTCGAGCTGCAGCCGGATGCAGTaGTCATCCTTGATCAGTGGGTGGCGCATCACGTCGGTGGCAATC +
Preference number: 5 (lower is better)
Translates to: SCTVLAKGSSCSRMQ*SSLISGWRITSVAI
Trigger: GATTGCCACCGACGTGATGCGCCACCCACTGATCAAGGATGAGCACTGCATCCGGCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GCCATCGGCCCGGATGATCTTGCGGAAGGTCATGACTTCTCCCTCTaGCGAGATCATGGCCGACACGAGCTTCTCCCCGCTGTCCCCATC +
Preference number: 5 (lower is better)
Translates to: AIGPDDLAEGHDFSL*RDHGRHELLPAVPI
Trigger: GATGGGGACAGCGGGGAGAAGCTCGTGTCGGCCATGATCTCGGCAGAGGGAGAAGTCATGACCTTCCGCAAGATCATCCGGGCCGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CCACTTCCCAGGTCCACCACACCTGGCTGGCGGCCAGCACCACCATaGCTTGGTACAGCAGCATCCAGTCCACCCTGCTTCTGTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PLPRSTTPGWRPAPP*LGTAASSPPCFCLH
Trigger: GTGAAGACAGAAGCAGGGTGGACTGGATGCTGCTGTACCAAGGCATGGTGGTGCTGGCCGCCAGCCAGGTGTGGTGGACCTGGGAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TGGTCTCTTCCAGGGTCTGCACCAGCTCCACATTGTCCAGCATGTTaGCCGTGGACGTGGCCAGCTCGCGCAGGAGTGAGTCCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: WSLPGSAPAPHCPAC*PWTWPARAGVSPPG
Trigger: ACCTGGAGGACTCACTCCTGCGCGAGCTGGCCACGTCCACGGGCAACATGCTGGACAATGTGGAGCTGGTGCAGACCCTGGAAGAGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GCTTCCCCAGCGAGATCACCCAGGACTTGGCATTTTCTTGCACGGTaGTGGCCAAGGGCTCGAGCTGCAGCCGGATGCAGTGCTCATCCT +
Preference number: 5 (lower is better)
Translates to: ASPARSPRTWHFLAR*WPRARAAAGCSAHP
Trigger: AGGATGAGCACTGCATCCGGCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCTCGCTGGGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TTGAGGAGCTTCCCCAGCGAGATCACCCAGGACTTGGCATTTTCTTaGACGGTGCTGGCCAAGGGCTCGAGCTGCAGCCGGATGCAGTGC +
Preference number: 5 (lower is better)
Translates to: LRSFPSEITQDLAFS*TVLAKGSSCSRMQC
Trigger: GCACTGCATCCGGCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCTCGCTGGGGAAGCTCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TCGTTCAGGCTCTTCTGGCACTTCTCCAGGCCCTCGCTGATGGTCTaGAGGTCGTGGAGGCGGTTTGGGGCCTCACAGCAGCGCTTTATC +
Preference number: 5 (lower is better)
Translates to: SFRLFWHFSRPSLMV*RSWRRFGASQQRFI
Trigger: GATAAAGCGCTGCTGTGAGGCCCCAAACCGCCTCCACGACCTGCAGACCATCAGCGAGGGCCTGGAGAAGTGCCAGAAGAGCCTGAACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GGTCTCCAACCTCAAAGAGCAGGGCGCAGTGCGCCTGGAGCCGGATaGGCTCCCCGTTGGCCAAGGTCAACAGTTTGTTGTCGTCCATCA +
Preference number: 5 (lower is better)
Translates to: GLQPQRAGRSAPGAG*APRWPRSTVCCRPS
Trigger: TGATGGACGACAACAAACTGTTGACCTTGGCCAACGGGGAGCGCATCCGGCTCCAGGCGCACTGCGCCCTGCTCTTTGAGGTTGGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp GCCGTAGCTGAAGGTCCCAGTGCACTGGCGGATGTTGAGCTCATCTaGCTCGCGGTCCCAGTAGAAGCGGAGCTGGCTCTCCCACTCAAA +
Preference number: 5 (lower is better)
Translates to: AVAEGPSALADVELI*LAVPVEAELALPLK
Trigger: TTTGAGTGGGAGAGCCAGCTCCGCTTCTACTGGGACCGCGAGCCAGATGAGCTCAACATCCGCCAGTGCACTGGGACCTTCAGCTACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp GCGTATTGCAGGTCTCCAACCTCAAAGAGCAGGGCGCAGTGCGCCTaGAGCCGGATGCGCTCCCCGTTGGCCAAGGTCAACAGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: AYCRSPTSKSRAQCA*SRMRSPLAKVNSLL
Trigger: CAACAAACTGTTGACCTTGGCCAACGGGGAGCGCATCCGGCTCCAGGCGCACTGCGCCCTGCTCTTTGAGGTTGGAGACCTGCAATACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGATGGCGGCCTCATACTaGGCCCCCAGAGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEMAASY*APRASS
Trigger: ACTGGAGGCTCTGGGGGCCAAGTATGAGGCCGCCAT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCCAATGGGGAAGCCCTaGGTGGGGTCTGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEPMGKP*VGSVVS
Trigger: GCTCACCACAGACCCCACCAAGGGCTTCCCCATTGG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp TGCTGGCCAAGGGCTCGAGCTGCAGCCGGATGCAGTGCTCATCCTTaGTCAGTGGGTGGCGCATCACGTCGGTGGCAATCTTGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: CWPRARAAAGCSAHP*SVGGASRRWQSWSR
Trigger: TCTACTCCAAGATTGCCACCGACGTGATGCGCCACCCACTGATCAAGGATGAGCACTGCATCCGGCTGCAGCTCGAGCCCTTGGCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp CAGGGACTCCTCCGATGGGAAAGGGACATTGAAGACGCTGAACAGTaGGAGGAATCTGGGGTCCACCTCGTTGCGGCCCCCTCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: QGLLRWERDIEDAEQ*EESGVHLVAAPSCL
Trigger: AAGGCAGGAGGGGGCCGCAACGAGGTGGACCCCAGATTCCTCTCACTGTTCAGCGTCTTCAATGTCCCTTTCCCATCGGAGGAGTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp TGTCCAGCTTCTGCAGCTCTAGTTTGGCAGCCTCCAGGATGGGCATaGCCTCAGCCAGAGCTGTCTCAGCCTCGGCCTTCTCGACAGCGA +
Preference number: 5 (lower is better)
Translates to: CPASAALVWQPPGWA*PQPELSQPRPSRQR
Trigger: TCGCTGTCGAGAAGGCCGAGGCTGAGACAGCTCTGGCTGAGGTCATGCCCATCCTGGAGGCTGCCAAACTAGAGCTGCAGAAGCTGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp ATTGTCCAGCATGTTGCCCGTGGACGTGGCCAGCTCGCGCAGGAGTaGGTCCTCCAGGTCCTTGAGCAGGTTCTTGTTCTCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: IVQHVARGRGQLAQE*VLQVLEQVLVLAGL
Trigger: GAGACCAGCGAGAACAAGAACCTGCTCAAGGACCTGGAGGACTCACTCCTGCGCGAGCTGGCCACGTCCACGGGCAACATGCTGGACAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp TGTTCTCAATGTCTTTGGCAACCTGGCCAATGTAGTCGTCACGGCTaGCGCCGCTGCTGGACTCCCCTGTCTGCGGCTGCAGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: CSQCLWQPGQCSRHG*RRCWTPLSAAAAPA
Trigger: TGCTGGAGCTGCAGCCGCAGACAGGGGAGTCCAGCAGCGGCGTCAGCCGTGACGACTACATTGGCCAGGTTGCCAAAGACATTGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CAGGACTTGGCATTTTCTTGCACGGTGCTGGCCAAGGGCTCGAGCTaGAGCCGGATGCAGTGCTCATCCTTGATCAGTGGGTGGCGCATC +
Preference number: 5 (lower is better)
Translates to: QDLAFSCTVLAKGSS*SRMQCSSLISGWRI
Trigger: GATGCGCCACCCACTGATCAAGGATGAGCACTGCATCCGGCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GACTGGCAGGAGCACATAACCATTTTCCTCCAACACCTGCTCCACTaGGTCGTTGAAATCCGGGTAGCGCACACGGGGGCAGTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: DWQEHITIFLQHLLH*VVEIRVAHTGAVQP
Trigger: GGGCTGGACTGCCCCCGTGTGCGCTACCCGGATTTCAACGACGCAGTGGAGCAGGTGTTGGAGGAAAATGGTTATGTGCTCCTGCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GCGATCAACCGCCTCTCCATAATCTCTGCCTCCTCCTGCAGTTTCTaGTTCTCCAGGATGGCGGCCTCATACTTGGCCCCCAGAGCCTCC +
Preference number: 5 (lower is better)
Translates to: AINRLSIISASSCSF*FSRMAASYLAPRAS
Trigger: GGAGGCTCTGGGGGCCAAGTATGAGGCCGCCATCCTGGAGAAGCAGAAACTGCAGGAGGAGGCAGAGATTATGGAGAGGCGGTTGATCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TCCTTCATCTTCCTCCCCACCTCCAGGTATCTCTGCTTCACCTGCTaGCCCCTCTCGCTGTCCAGGAGTTCCTCCACCTCCATGAAGCGC +
Preference number: 5 (lower is better)
Translates to: SFIFLPTSRYLCFTC*PLSLSRSSSTSMKR
Trigger: GCGCTTCATGGAGGTGGAGGAACTCCTGGACAGCGAGAGGGGCCAGCAGGTGAAGCAGAGATACCTGGAGGTGGGGAGGAAGATGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp AGCAGGGGGATGGAGTCTTTGAACGCCTTCATCTTCACTTCCAAATaGAAGGCCACGGACAAGCCGCGCACCTGCCGTGGCAGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: SRGMESLNAFIFTSK*KATDKPRTCRGSLR
Trigger: CCGCAAGCTGCCACGGCAGGTGCGCGGCTTGTCCGTGGCCTTCCATTTGGAAGTGAAGATGAAGGCGTTCAAAGACTCCATCCCCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CCGCTTGGCATCGAAATGAAAGTCGTACAGGGAGGGAAGATGCCCTaGCAGTTCCCCGGGACGGGCCCAGTTCCCTTCCGAATCCACAGT +
Preference number: 5 (lower is better)
Translates to: PLGIEMKVVQGGKMP*QFPGTGPVPFRIHS
Trigger: ACTGTGGATTCGGAAGGGAACTGGGCCCGTCCCGGGGAACTGCCAGGGCATCTTCCCTCCCTGTACGACTTTCATTTCGATGCCAAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CGATCTTCTGCTCTGCCAGCTTCAGGTTCAGCTCGTCCAGCTGGATaGTCGCCTCCTTCAGCTTGTCCAGCCCTCCTTCCAGACGCTTGC +
Preference number: 5 (lower is better)
Translates to: RSSALPASGSARPAG*SPPSACPALLPDAC
Trigger: GCAAGCGTCTGGAAGGAGGGCTGGACAAGCTGAAGGAGGCGACCATCCAGCTGGACGAGCTGAACCTGAAGCTGGCAGAGCAGAAGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp AGGACGATCTTCTGCTCTGCCAGCTTCAGGTTCAGCTCGTCCAGCTaGATGGTCGCCTCCTTCAGCTTGTCCAGCCCTCCTTCCAGACGC +
Preference number: 5 (lower is better)
Translates to: RTIFCSASFRFSSSS*MVASFSLSSPPSRR
Trigger: GCGTCTGGAAGGAGGGCTGGACAAGCTGAAGGAGGCGACCATCCAGCTGGACGAGCTGAACCTGAAGCTGGCAGAGCAGAAGATCGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTCAGCCAGAGGGCCATaGCCCTGGGGCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAESARGP*PWGFFF
Trigger: GAAGAAGAAGCCCCAGGGCAATGGCCCTCTGGCTGA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGAGCACCTCCGTGTGCTaGTGCAGCTCCATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAESTSVC*CSSMAN
Trigger: GTTCGCCATGGAGCTGCACAAGCACACGGAGGTGCT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGGTCGTGGAGGCGGTTaGGGGCCTCACAGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGGRGGG*GPHSSA
Trigger: AGCGCTGCTGTGAGGCCCCAAACCGCCTCCACGACC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGTGCACTGGCGGATGTaGAGCTCATCTGGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPVHWRM*SSSGSR
Trigger: CCGCGAGCCAGATGAGCTCAACATCCGCCAGTGCAC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCTTCAGCTTCTCCCCTaGCCTCCCGTCCACGATCCC +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLLQLLP*PPVHDP
Trigger: GGGATCGTGGACGGGAGGCAAGGGGAGAAGCTGAAG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GGAGCACATAACCATTTTCCTCCAACACCTGCTCCACTGCGTCGTTaGAATCCGGGTAGCGCACACGGGGGCAGTCCAGCCCGGGAAACA +
Preference number: 5 (lower is better)
Translates to: GAHNHFPPTPAPLRR*NPGSAHGGSPARET
Trigger: TGTTTCCCGGGCTGGACTGCCCCCGTGTGCGCTACCCGGATTTCAACGACGCAGTGGAGCAGGTGTTGGAGGAAAATGGTTATGTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GCCACTGCGGTCTCCAACAGCTGCAGAGCCACCTTTTCTTGGCCTTaGCCCATTGCAAGAAACTTGAGACGCGTGCCCCCGAAGCCACTC +
Preference number: 5 (lower is better)
Translates to: ATAVSNSCRATFSWP*PIARNLRRVPPKPL
Trigger: GAGTGGCTTCGGGGGCACGCGTCTCAAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGTGGCTCTGCAGCTGTTGGAGACCGCAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TTGTCCGCTGCGATCAACCGCCTCTCCATAATCTCTGCCTCCTCCTaGAGTTTCTGCTTCTCCAGGATGGCGGCCTCATACTTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: LSAAINRLSIISASS*SFCFSRMAASYLAP
Trigger: GGGGGCCAAGTATGAGGCCGCCATCCTGGAGAAGCAGAAACTGCAGGAGGAGGCAGAGATTATGGAGAGGCGGTTGATCGCAGCGGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp AAGGCCGCACAGAGCAAGCAGTCGCCTAGCAGCTTCACCCGCCGGTaGATTAGCTCATCCAGGTCGTTCAGCCACCTGACGTTTTCTGAG +
Preference number: 5 (lower is better)
Translates to: KAAQSKQSPSSFTRR*ISSSRSFSHLTFSE
Trigger: CTCAGAAAACGTCAGGTGGCTGAACGACCTGGATGAGCTAATGCACCGGCGGGTGAAGCTGCTAGGCGACTGCTTGCTCTGTGCGGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GGTCTCCAACAGCTGCAGAGCCACCTTTTCTTGGCCTTGACCCATTaGAAGAAACTTGAGACGCGTGCCCCCGAAGCCACTCCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: GLQQLQSHLFLALTH*KKLETRAPEATPLS
Trigger: GCTGAGCGGAGTGGCTTCGGGGGCACGCGTCTCAAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGTGGCTCTGCAGCTGTTGGAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CAGGAGGTGGCAGTTCTGCAACATCAGCCACTGTCCACGAGCCACTaGGGTCTCCAACAGCTGCAGAGCCACCTTTTCTTGGCCTTGACC +
Preference number: 5 (lower is better)
Translates to: QEVAVLQHQPLSTSH*GLQQLQSHLFLALT
Trigger: GGTCAAGGCCAAGAAAAGGTGGCTCTGCAGCTGTTGGAGACCGCAGTGGCTCGTGGACAGTGGCTGATGTTGCAGAACTGCCACCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp AGGCCACGCAGGCTGGTTTCTTGGCCGCAAACTTCTCCATCACGATaGACTTGTCCAGCTTCCAGAGGGGCCGGTATCGCTTCCACCTCT +
Preference number: 5 (lower is better)
Translates to: RPRRLVSWPQTSPSR*TCPASRGAGIASTS
Trigger: AGAGGTGGAAGCGATACCGGCCCCTCTGGAAGCTGGACAAGTCCATCGTGATGGAGAAGTTTGCGGCCAAGAAACCAGCCTGCGTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CAAGGGCTCGAGCTGCAGCCGGATGCAGTGCTCATCCTTGATCAGTaGGTGGCGCATCACGTCGGTGGCAATCTTGGAGTAGAACTGCAG +
Preference number: 5 (lower is better)
Translates to: QGLELQPDAVLILDQ*VAHHVGGNLGVELQ
Trigger: CTGCAGTTCTACTCCAAGATTGCCACCGACGTGATGCGCCACCCACTGATCAAGGATGAGCACTGCATCCGGCTGCAGCTCGAGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CTTCTCCAGGCCCTCGCTGATGGTCTGCAGGTCGTGGAGGCGGTTTaGGGCCTCACAGCAGCGCTTTATCACTGGGTCTTTCAATGTCTC +
Preference number: 5 (lower is better)
Translates to: LLQALADGLQVVEAV*GLTAALYHWVFQCL
Trigger: GAGACATTGAAAGACCCAGTGATAAAGCGCTGCTGTGAGGCCCCAAACCGCCTCCACGACCTGCAGACCATCAGCGAGGGCCTGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CAGTGCCTTGGCGGCCTCGTAGTCCTGGATGTCTTCATAAATGCGTaGCTCCCCCTCTTGCAGAGCCAACCGGAAGTCCCCGAACAGGAT +
Preference number: 5 (lower is better)
Translates to: QCLGGLVVLDVFINA*LPLLQSQPEVPEQD
Trigger: ATCCTGTTCGGGGACTTCCGGTTGGCTCTGCAAGAGGGGGAGCCACGCATTTATGAAGACATCCAGGACTACGAGGCCGCCAAGGCACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TCGTTTGATCCAGTTGAGGGCCTGCTGCTGGGGGTCGATGCAGAGTaGGAAGCGACTGGCCCGGGTTGTAAGGATGCCATTCTGAACCGA +
Preference number: 5 (lower is better)
Translates to: SFDPVEGLLLGVDAE*EATGPGCKDAILNR
Trigger: TCGGTTCAGAATGGCATCCTTACAACCCGGGCCAGTCGCTTCCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGATCAAACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTCCATCACGATGGACTaGTCCAGCTTCCAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAESITMD*SSFQRG
Trigger: GCCCCTCTGGAAGCTGGACAAGTCCATCGTGATGGA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGGACTTGGCATTTTCTaGCACGGTGCTGGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEGLGIF*HGAGQG
Trigger: CCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGGAGGCCCAGGGCTTaGGCGAGGTCCTTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGRRPRA*ARSLVV
Trigger: GACCACCAAGGACCTCGCCAAAGCCCTGGGCCTCCT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGTCGCCTCCTTCAGCTaGTCCAGCCCTCCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAVASFS*SSPPSR
Trigger: TCTGGAAGGAGGGCTGGACAAGCTGAAGGAGGCGAC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGTTCTCGCTGGTCTCTaGGATGAGGTGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEVLAGL*DEVLPL
Trigger: CAGAGGGAGCACCTCATCCAAGAGACCAGCGAGAAC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCACATTGTCCAGCATGTaGCCCGTGGACGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPTLSSM*PVDVAS
Trigger: GCTGGCCACGTCCACGGGCAACATGCTGGACAATGT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTGCACCAGCTCCACATaGTCCAGCATGTTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAECTSST*SSMLPV
Trigger: CACGGGCAACATGCTGGACAATGTGGAGCTGGTGCA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GGTAGAAGAACAGCGCAGAGGCGTTGTCCTCGTCACTCAAGTGGTTaGGGAAGTGCAAGATGCAGTCCTCCGCCTCGCTGTCATCACGGC +
Preference number: 5 (lower is better)
Translates to: GRRTAQRRCPRHSSG*GSARCSPPPRCHHG
Trigger: GCCGTGATGACAGCGAGGCGGAGGACTGCATCTTGCACTTCCTCAACCACTTGAGTGACGAGGACAACGCCTCTGCGCTGTTCTTCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp AACAGCGCAGAGGCGTTGTCCTCGTCACTCAAGTGGTTGAGGAAGTaGAAGATGCAGTCCTCCGCCTCGCTGTCATCACGGCTCAGCATC +
Preference number: 5 (lower is better)
Translates to: NSAEALSSSLKWLRK*KMQSSASLSSRLSI
Trigger: GATGCTGAGCCGTGATGACAGCGAGGCGGAGGACTGCATCTTGCACTTCCTCAACCACTTGAGTGACGAGGACAACGCCTCTGCGCTGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TACTCCTTCATCTTCCTCCCCACCTCCAGGTATCTCTGCTTCACCTaGTGGCCCCTCTCGCTGTCCAGGAGTTCCTCCACCTCCATGAAG +
Preference number: 5 (lower is better)
Translates to: YSFIFLPTSRYLCFT*WPLSLSRSSSTSMK
Trigger: CTTCATGGAGGTGGAGGAACTCCTGGACAGCGAGAGGGGCCAGCAGGTGAAGCAGAGATACCTGGAGGTGGGGAGGAAGATGAAGGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CAAACAGTGCCTTGGCGGCCTCGTAGTCCTGGATGTCTTCATAAATaGGTGGCTCCCCCTCTTGCAGAGCCAACCGGAAGTCCCCGAACA +
Preference number: 5 (lower is better)
Translates to: QTVPWRPRSPGCLHK*VAPPLAEPTGSPRT
Trigger: TGTTCGGGGACTTCCGGTTGGCTCTGCAAGAGGGGGAGCCACGCATTTATGAAGACATCCAGGACTACGAGGCCGCCAAGGCACTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CGTTCCACAGTGGACAGGAAGCGCACATTGTCGGAGGCCTCCATGTaGAGCTTGAAGAGTTCCGTCAGGATAGGCTGCACATTGGCCGTG +
Preference number: 5 (lower is better)
Translates to: RSTVDRKRTLSEASM*SLKSSVRIGCTLAV
Trigger: CACGGCCAATGTGCAGCCTATCCTGACGGAACTCTTCAAGCTCCACATGGAGGCCTCCGACAATGTGCGCTTCCTGTCCACTGTGGAACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CCCAGTACTCATAGTAGGAAGCTAGCTTTGGGGCCCTGCCCGTGTTaGTGTGTACCACTAGACCTTCCACCTTGGTCAGCAGAGGCCCGA +
Preference number: 5 (lower is better)
Translates to: PSTHSRKLALGPCPC*CVPLDLPPWSAEAR
Trigger: TCGGGCCTCTGCTGACCAAGGTGGAAGGTCTAGTGGTACACACCAACACGGGCAGGGCCCCAAAGCTAGCTTCCTACTATGAGTACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TGGCTCAGGGGGATGTCGCGATCCAAGATGTCGTTCTGCCACACCTaGTTGACCATCTCATCACGAAACTCCCAGGTAAAGGCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: WLRGMSRSKMSFCHT*LTISSRNSQVKAPS
Trigger: CGAGGGCGCCTTTACCTGGGAGTTTCGTGATGAGATGGTCAACCAGGTGTGGCAGAACGACATCTTGGATCGCGACATCCCCCTGAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGAGCGTGAGCCTGGAGTaGATGTCGTCGGCATTCTTG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAESVSLE*MSSAFL
Trigger: CAAGAATGCCGACGACATCAACTCCAGGCTCACGCT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGAACTGTCATCTTCTaGGCCAGCGTCTTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPRTVIF*ASVLAP
Trigger: GGGCGCCAAGACGCTGGCCAAGAAGATGACAGTTCT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCTTCAGCTTCTCCCCTaGCCTCCCGTCCACGATCCC +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHLQLLP*PPVHDP
Trigger: GGGATCGTGGACGGGAGGCAAGGGGAGAAGCTGAAG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTTCTGCAGCTCTAGTTaGGCAGCCTCCAGGATGGGC +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPFCSSS*AASRMG
Trigger: GCCCATCCTGGAGGCTGCCAAACTAGAGCTGCAGAA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGGCGGCCTCATACTaGGCCCCCAGAGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGMAASY*APRASS
Trigger: ACTGGAGGCTCTGGGGGCCAAGTATGAGGCCGCCAT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTTTCGTTTGATCCAGTaGAGGGCCTGCTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAFRLIQ*RACCWG
Trigger: CCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGAGTCCTCCAGGTCCTaGAGCAGGTTCTTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEESSRS*SRFLFS
Trigger: CGAGAACAAGAACCTGCTCAAGGACCTGGAGGACTC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTGCACCAGCTCCACATaGTCCAGCATGTTGCCCGTG +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLCTSST*SSMLPV
Trigger: CACGGGCAACATGCTGGACAATGTGGAGCTGGTGCA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCGAATGACAAGCTTGTaGAAGCGCCCCAGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAERMTSL*KRPSSC
Trigger: ACAGGAGCTGGGGCGCTTCAACAAGCTTGTCATTCG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GCAGGTGGTAGTGATCCAGCATGCGCTGGATCCCCTCTGTATACCTaGGGAATTTGTCTTCCTGGAGGGCCACGTTCCTCGCCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: AGGSDPACAGSPLYT*GICLPGGPRSSPVQ
Trigger: CTGAACTGGCGAGGAACGTGGCCCTCCAGGAAGACAAATTCCTCAGGTATACAGAGGGGATCCAGCGCATGCTGGATCACTACCACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp CCTGGACCACAGCGTGGAAGAAGGCCAACACGTAGACCAGGGGCTTaGAGGCGGTATGCGGACACTGCTCCAGCATGTCATTGGAAATCT +
Preference number: 5 (lower is better)
Translates to: PGPQRGRRPTRRPGA*RRYADTAPACHWKS
Trigger: AGATTTCCAATGACATGCTGGAGCAGTGTCCGCATACCGCCTTCAAGCCCCTGGTCTACGTGTTGGCCTTCTTCCACGCTGTGGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp ACAGTAGCCCATGACGGCCTCCACGAACTTCAGCATGCCCAGCCCTaGCTTGCTCACAGCCTCCATCTCTTCGATTGTGGTGTTCAGAGT +
Preference number: 5 (lower is better)
Translates to: TVAHDGLHELQHAQP*LAHSLHLFDCGVQS
Trigger: ACTCTGAACACCACAATCGAAGAGATGGAGGCTGTGAGCAAGGCAGGGCTGGGCATGCTGAAGTTCGTGGAGGCCGTCATGGGCTACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CGTAGGTTATTCTTCTCCTCTTTTCGTTTGATCCAGTTGAGGGCCTaGTGCTGGGGGTCGATGCAGAGTGGGAAGCGACTGGCCCGGGTT +
Preference number: 5 (lower is better)
Translates to: RRLFFSSFRLIQLRA*CWGSMQSGKRLARV
Trigger: AACCCGGGCCAGTCGCTTCCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAAAGAGGAGAAGAATAACCTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CAAGGTCTTCGCCCACGGCCCCAGGGCCTTGGCTGTAGAAACGTCTaGCGAATTCATCCAGCTGGCTCCTGTAGTTCATTATCTCACTCC +
Preference number: 5 (lower is better)
Translates to: QGLRPRPQGLGCRNV*RIHPAGSCSSLSHS
Trigger: GGAGTGAGATAATGAACTACAGGAGCCAGCTGGATGAATTCGCCAGACGTTTCTACAGCCAAGGCCCTGGGGCCGTGGGCGAAGACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp GCCCCCAGAGCCTCCAGTTCCTTTTGGATCGCTGCCAGCTCGTTCTaGATCCTCTCTAGCTCCCGTTTGGTTAGGAAGAAATTCCGCTCC +
Preference number: 5 (lower is better)
Translates to: APRASSSFWIAASSF*ILSSSRLVRKKFRS
Trigger: GGAGCGGAATTTCTTCCTAACCAAACGGGAGCTAGAGAGGATCCAGAACGAGCTGGCAGCGATCCAAAAGGAACTGGAGGCTCTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTGGCCTGACTCCGATTaGTGCTGGTTGAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEWPDSD*CWLKDS
Trigger: ACTGTCCTTCAACCAGCACAAATCGGAGTCAGGCCA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCATGCAGTGCTCATCCTaGATCAGTGGGTGGCGCATC +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAMQCSS*ISGWRI
Trigger: GATGCGCCACCCACTGATCAAGGATGAGCACTGCAT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCGCTCCTGGATGTCCTaGTACCTCAGCTCCATGACT +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLRSWMS*YLSSMT
Trigger: AGTCATGGAGCTGAGGTACAAGGACATCCAGGAGCG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAGCACCTCCGTGTGCTaGTGCAGCTCCATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSTSVC*CSSMAN
Trigger: GTTCGCCATGGAGCTGCACAAGCACACGGAGGTGCT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGTGCACTGGCGGATGTaGAGCTCATCTGGCTCGCGG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGVHWRM*SSSGSR
Trigger: CCGCGAGCCAGATGAGCTCAACATCCGCCAGTGCAC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTTTGGCGAGGTCCTaGGTGGTCTCTGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHALARS*VVSVLP
Trigger: CGGCAAGACAGAGACCACCAAGGACCTCGCCAAAGC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTCCTCAAACACAAACTaGGGCAGGTTCATGTCCCGC +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAESSNTN*GRFMSR
Trigger: GCGGGACATGAACCTGCCCAAGTTTGTGTTTGAGGA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTGCCACACAGACTCCTaGGCTGGACCCATCCCGAAC +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHCHTDS*AGPIPN
Trigger: GTTCGGGATGGGTCCAGCCAAGGAGTCTGTGTGGCA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGTCGCCTCCTTCAGCTaGTCCAGCCCTCCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGVASFS*SSPPSR
Trigger: TCTGGAAGGAGGGCTGGACAAGCTGAAGGAGGCGAC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTCAGTCACGTCGGACTaGTCCAGCTTCTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSVTSD*SSFCSS
Trigger: AGAGCTGCAGAAGCTGGACAAGTCCGACGTGACTGA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCCTCCAGTTCCTTTaGGATCGCTGCCAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSLQFL*DRCQLV
Trigger: AACGAGCTGGCAGCGATCCAAAAGGAACTGGAGGCT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCTAGGATTGGCCAGCTaGGTATTGAGGTACAGCCGG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPLGLAS*VLRYSR
Trigger: CCGGCTGTACCTCAATACCAAGCTGGCCAATCCTAG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCTAGGATTGGCCAGCTaGGTATTGAGGTACAGCCGG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPALGLAS*VLRYSR
Trigger: CCGGCTGTACCTCAATACCAAGCTGGCCAATCCTAG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATACATTGTCCAGCATGTaGCCCGTGGACGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHTLSSM*PVDVAS
Trigger: GCTGGCCACGTCCACGGGCAACATGCTGGACAATGT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGTCAGGGTGCGGCTaGGTGATCCTCTCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGKSGCG*VILSRD
Trigger: GTCCCTGGAGAGGATCACCAAGCCGCACCCTGACTT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTCTCCAATAAGGTACTaGAGGCTGCCCCAGGGGATG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSPIRY*RLPQGM
Trigger: CATCCCCTGGGGCAGCCTCAAGTACCTTATTGGAGA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGACCTTGGGCTTGCTCTaGACAAGACACCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAETLGLL*TRHPLS
Trigger: AGAGAGAGGGTGTCTTGTCAAGAGCAAGCCCAAGGT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCACCAGCACCTTGGGCTaGCTCTTGACAAGACACCCT +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPATSTLG*LLTRHP
Trigger: AGGGTGTCTTGTCAAGAGCAAGCCCAAGGTGCTGGT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp AGATCTTCCCGACAGCCTTGTAATCCATGCCTTCACCACAGTTTGTaGCAACACACAGGAGGCCCAGGGCTTTGGCGAGGTCCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: RSSRQPCNPCLHHSL*QHTGGPGLWRGPWW
Trigger: CCACCAAGGACCTCGCCAAAGCCCTGGGCCTCCTGTGTGTTGTCACAAACTGTGGTGAAGGCATGGATTACAAGGCTGTCGGGAAGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GATGTTGTCCTTTTCCTCTTCAGCGAAGAGCGCGGGGACCATTCCTaGGGTCAGCATGTTGTTGATGAGTTCCAGGAAGCCCTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: DVVLFLFSEERGDHS*GQHVVDEFQEALLG
Trigger: GCCGAGGAGGGCTTCCTGGAACTCATCAACAACATGCTGACCTCAGGAATGGTCCCCGCGCTCTTCGCTGAAGAGGAAAAGGACAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp CCTGTCAATGTCCAGGGCTGTCTTCTCCGCCAGCTTCAGCTTCTCTaGAACCTCTGTGGCTTTGGACTTGGTCTCTTCCAGGGTCTGCAC +
Preference number: 5 (lower is better)
Translates to: PVNVQGCLLRQLQLL*NLCGFGLGLFQGLH
Trigger: GTGCAGACCCTGGAAGAGACCAAGTCCAAAGCCACAGAGGTTTCAGAGAAGCTGAAGCTGGCGGAGAAGACAGCCCTGGACATTGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CGTGGCAGCTTGCGGAGGTTCTTGAGGAAGCCCTCGATACCTTCCTaGAGATACTGGACATTCAGGTTGATCCAGAGGGTCTGGGACCAT +
Preference number: 5 (lower is better)
Translates to: RGSLRRFLRKPSIPS*RYWTFRLIQRVWDH
Trigger: ATGGTCCCAGACCCTCTGGATCAACCTGAATGTCCAGTATCTGCAGGAAGGTATCGAGGGCTTCCTCAAGAACCTCCGCAAGCTGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp ACGGTTTGCAGGAAAGGCCCCACGAATCTGCTCCCGGAGATGCTCTaGAAGTTGACTGTGTTGTCGTCCAAGCACTGGATGATGTCGTCC +
Preference number: 5 (lower is better)
Translates to: TVCRKGPTNLLPEML*KLTVLSSKHWMMSS
Trigger: GGACGACATCATCCAGTGCTTGGACGACAACACAGTCAACTTGCAGAGCATCTCCGGGAGCAGATTCGTGGGGCCTTTCCTGCAAACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TTCGCGAATGACCTGATTTCAGTCACGTCGGACTTGTCCAGCTTCTaGAGCTCTAGTTTGGCAGCCTCCAGGATGGGCATGACCTCAGCC +
Preference number: 5 (lower is better)
Translates to: FANDLISVTSDLSSF*SSSLAASRMGMTSA
Trigger: GGCTGAGGTCATGCCCATCCTGGAGGCTGCCAAACTAGAGCTGCAGAAGCTGGACAAGTCCGACGTGACTGAAATCAGGTCATTCGCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CGGAAAGGCTGGCTCAGGGGGATGTCGCGATCCAAGATGTCGTTCTaGCACACCTGGTTGACCATCTCATCACGAAACTCCCAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: RKGWLRGMSRSKMSF*HTWLTISSRNSQVK
Trigger: CTTTACCTGGGAGTTTCGTGATGAGATGGTCAACCAGGTGTGGCAGAACGACATCTTGGATCGCGACATCCCCCTGAGCCAGCCTTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp AGGTTATTCTTCTCCTCTTTTCGTTTGATCCAGTTGAGGGCCTGCTaGTGGGGGTCGATGCAGAGTGGGAAGCGACTGGCCCGGGTTGTA +
Preference number: 5 (lower is better)
Translates to: RLFFSSFRLIQLRAC*WGSMQSGKRLARVV
Trigger: TACAACCCGGGCCAGTCGCTTCCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAAAGAGGAGAAGAATAACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp AGTTTGAGCCCGTTAGGTGGCTCTGTGACCACCTTTAAGGACTTCTaGAGGATTCCAATGGGGAAGCCCTTGGTGGGGTCTGTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: SLSPLGGSVTTFKDF*RIPMGKPLVGSVVS
Trigger: GCTCACCACAGACCCCACCAAGGGCTTCCCCATTGGAATCCTGCAGAAGTCCTTAAAGGTGGTCACAGAGCCACCTAACGGGCTCAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TCCTGTAGCAGTACCACCGAGGTGGGTGTGATGCTCAAGCCCAGGTaGTTCCGAACCTGGTCCAGGTCAAAGATCTTGGGCATCTTGTTC +
Preference number: 5 (lower is better)
Translates to: SCSSTTEVGVMLKPR*FRTWSRSKILGILF
Trigger: GAACAAGATGCCCAAGATCTTTGACCTGGACCAGGTTCGGAAGCACCTGGGCTTGAGCATCACACCCACCTCGGTGGTACTGCTACAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GGATGTGCCCAAGGAAGAGAGACCTGGCTACATCATCTAACTCATTaGTCATTCCGACTTCCCCAGCCAAGGCCCTCTGGAGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: GCAQGRETWLHHLTH*SFRLPQPRPSGAQP
Trigger: TGGCTGAGCTCCAGAGGGCCTTGGCTGGGGAAGTCGGAATGAGCAATGAGTTAGATGATGTAGCCAGGTCTCTCTTCCTTGGGCACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TCGATTTCAGCCAGAGGGCCATTGCCCTGGGGCTTCTTCTTCATCTaGGAATCCAGCGCATATGAAATCTGGCCCAGCCAGTGGATCACG +
Preference number: 5 (lower is better)
Translates to: SISARGPLPWGFFFI*ESSAYEIWPSQWIT
Trigger: CGTGATCCACTGGCTGGGCCAGATTTCATATGCGCTGGATTCCCAGATGAAGAAGAAGCCCCAGGGCAATGGCCCTCTGGCTGAAATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TTATTCTTCTCCTCTTTTCGTTTGATCCAGTTGAGGGCCTGCTGCTaGGGGTCGATGCAGAGTGGGAAGCGACTGGCCCGGGTTGTAAGG +
Preference number: 5 (lower is better)
Translates to: LFFSSFRLIQLRACC*GSMQSGKRLARVVR
Trigger: CCTTACAACCCGGGCCAGTCGCTTCCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAAAGAGGAGAAGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp ACAAAGCACCCTTGCCCCGCACGCTCGTTTACTTCATCGGCATCCTaGAACTTGGTCACTTGTGTAAACAAGGTGGACCGGTCCAACGGC +
Preference number: 5 (lower is better)
Translates to: TKHPCPARSFTSSAS*NLVTCVNKVDRSNG
Trigger: GCCGTTGGACCGGTCCACCTTGTTTACACAAGTGACCAAGTTCCAGGATGCCGATGAAGTAAACGAGCGTGCGGGGCAAGGGTGCTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCATAGGGTTGGTGAGGTaGAAGGCAGTGTATACGCGG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAIGLVR*KAVYTR
Trigger: CCGCGTATACACTGCCTTCAACCTCACCAACCCTAT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTGGCCTGACTCCGATTaGTGCTGGTTGAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPWPDSD*CWLKDS
Trigger: ACTGTCCTTCAACCAGCACAAATCGGAGTCAGGCCA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATACATCGTCGATTCTCTaGGGGTCCCCTGTCACAGCC +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHTSSIL*GSPVTA
Trigger: GGCTGTGACAGGGGACCCCAAGAGAATCGACGATGT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGAGATCACCCAGGACTaGGCATTTTCTTGCACGGTG +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLEITQD*AFSCTV
Trigger: CACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCTC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGTTGCGAGGACAAACTaGAGGTCTTCAAGGGTGCTG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAVARTN*RSSRVL
Trigger: CAGCACCCTTGAAGACCTCAAGTTTGTCCTCGCAAC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTCTGTGAAAGTTCGCTaGATGCCCCCAAGGGCGTGC +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSVKVR*MPPRAC
Trigger: GCACGCCCTTGGGGGCATCAAGCGAACTTTCACAGA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGATCTCCTTCTGCACCTaGATGAGCTCAGGGTACATG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEISFCT*MSSGYM
Trigger: CATGTACCCTGAGCTCATCAAGGTGCAGAAGGAGAT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCATGTTGTCAAACTTCTaGGCCTCCTCAGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPMLSNF*ASSGSW
Trigger: CCAGCTGCCTGAGGAGGCCAAGAAGTTTGACAACAT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTTCTTCATGGCCTGCTaGTCCCCTTGCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAFFMAC*SPCLTL
Trigger: CAAGGTCAAGCAAGGGGACAAGCAGGCCATGAAGAA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAGGAGGCCCAGGGCTTaGGCGAGGTCCTTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGRRPRA*ARSLVV
Trigger: GACCACCAAGGACCTCGCCAAAGCCCTGGGCCTCCT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGAACTGTCATCTTCTaGGCCAGCGTCTTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGRTVIF*ASVLAP
Trigger: GGGCGCCAAGACGCTGGCCAAGAAGATGACAGTTCT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTCCTCAAACACAAACTaGGGCAGGTTCATGTCCCGC +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSSNTN*GRFMSR
Trigger: GCGGGACATGAACCTGCCCAAGTTTGTGTTTGAGGA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGAGGTCAGCATGTTGTaGATGAGTTCCAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLEVSML*MSSRKP
Trigger: GGGCTTCCTGGAACTCATCAACAACATGCTGACCTC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACAGACTGTCTGCACTaGCTTCGGGGGCTTCGCGAA +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGTDCLH*LRGLRE
Trigger: TTCGCGAAGCCCCCGAAGCAAGTGCAGACAGTCTGT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGGATGAACTGGCGGCCTaGGGAGGTCTTGATGTTCTT +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLDELAA*GGLDVL
Trigger: AAGAACATCAAGACCTCCCAAGGCCGCCAGTTCATC...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGGGGAGTATCTAGGATaGGCCAGCTTGGTATTGAGG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPGEYLG*ASLVLR
Trigger: CCTCAATACCAAGCTGGCCAATCCTAGATACTCCCC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCCTTGAGCAGGTTCTaGTTCTCGCTGGTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASLSRF*FSLVSW
Trigger: CCAAGAGACCAGCGAGAACAAGAACCTGCTCAAGGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGAAACCTCTGTGGCTTaGGACTTGGTCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPETSVA*DLVSSR
Trigger: CCTGGAAGAGACCAAGTCCAAAGCCACAGAGGTTTC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTACTGGTACATGGAGTaGACAAGCGCCATCTCCGAC +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLYWYME*TSAISD
Trigger: GTCGGAGATGGCGCTTGTCAACTCCATGTACCAGTA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAACACGATGGGCGAATaGGGGGTGCTCTGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPANTMGE*GVLCSK
Trigger: TTTTGAGCAGAGCACCCCCAATTCGCCCATCGTGTT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAAGTCAGGGTGCGGCTaGGTGATCCTCTCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGKSGCG*VILSRD
Trigger: GTCCCTGGAGAGGATCACCAAGCCGCACCCTGACTT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCTGGAACTTGGTCACTaGTGTAAACAAGGTGGACCG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAELELGH*CKQGGP
Trigger: CGGTCCACCTTGTTTACACAAGTGACCAAGTTCCAG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTCCACAACCAGCACCTaGGGCTTGCTCTTGACAAGA +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLSTTST*GLLLTR
Trigger: TCTTGTCAAGAGCAAGCCCAAGGTGCTGGTTGTGGA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GACTCGATGAGCGTGAGCCTGGAGTTGATGTCGTCGGCATTCTTGTaGATCTGGTGGACCAGAGTTTCGAACTTGCCGATGGCCTGCTTG +
Preference number: 5 (lower is better)
Translates to: DSMSVSLELMSSAFL*IWWTRVSNLPMACL
Trigger: CAAGCAGGCCATCGGCAAGTTCGAAACTCTGGTCCACCAGATTCACAAGAATGCCGACGACATCAACTCCAGGCTCACGCTCATCGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GGCATTCAATGCAGCTGCCGTTCATCCAGCGCACGAAATGCTTGGTaGCCTCCACACAGCTGCGGACACAGTGGACACACATCTTATCGA +
Preference number: 5 (lower is better)
Translates to: GIQCSCRSSSARNAW*PPHSCGHSGHTSYR
Trigger: TCGATAAGATGTGTGTCCACTGTGTCCGCAGCTGTGTGGAGGTCACCAAGCATTTCGTGCGCTGGATGAACGGCAGCTGCATTGAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TCGGAGGCCTCCATGTGGAGCTTGAAGAGTTCCGTCAGGATAGGCTaGACATTGGCCGTGAGCATGGACTCTGCTTCTTTGATCACCTCT +
Preference number: 5 (lower is better)
Translates to: SEASMWSLKSSVRIG*TLAVSMDSASLITS
Trigger: AGAGGTGATCAAAGAAGCAGAGTCCATGCTCACGGCCAATGTGCAGCCTATCCTGACGGAACTCTTCAAGCTCCACATGGAGGCCTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TCTTGCCTTCCCAGTACTCATAGTAGGAAGCTAGCTTTGGGGCCCTaGCCGTGTTGGTGTGTACCACTAGACCTTCCACCTTGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SCLPSTHSRKLALGP*PCWCVPLDLPPWSA
Trigger: TGCTGACCAAGGTGGAAGGTCTAGTGGTACACACCAACACGGGCAGGGCCCCAAAGCTAGCTTCCTACTATGAGTACTGGGAAGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CTCCGGGTGATCTCTGTGAAAGTTCGCTTGATGCCCCCAAGGGCGTaGTCCACGTTCATCGATTCCGTGAAGAGAGATTCCCACATGTTC +
Preference number: 5 (lower is better)
Translates to: LRVISVKVRLMPPRA*STFIDSVKRDSHMF
Trigger: GAACATGTGGGAATCTCTCTTCACGGAATCGATGAACGTGGAGCACGCCCTTGGGGGCATCAAGCGAACTTTCACAGAGATCACCCGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GTTTTCTCCATGAGTTCTTTCCAGTGTCGCTCTCGCAGGGCCTCATaGTTCAGGTCCAGAAGCAGGGGGATGGAGTCTTTGAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: VFSMSSFQCRSRRAS*FRSRSRGMESLNAF
Trigger: GAAGGCGTTCAAAGACTCCATCCCCCTGCTTCTGGACCTGAAGCATGAGGCCCTGCGAGAGCGACACTGGAAAGAACTCATGGAGAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TGTCTGCGGCTGCAGCTCCAGCAGATGACCCCACATGTCTCGAGCTaGCTGTGTGTAATAGCCAATCTCGGCATTGGAATGGAGACCAAA +
Preference number: 5 (lower is better)
Translates to: CLRLQLQQMTPHVSS*LCVIANLGIGMETK
Trigger: TTTGGTCTCCATTCCAATGCCGAGATTGGCTATTACACACAGGCAGCTCGAGACATGTGGGGTCATCTGCTGGAGCTGCAGCCGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CCCTGGGGCTTCTTCTTCATCTGGGAATCCAGCGCATATGAAATCTaGCCCAGCCAGTGGATCACGCACTGCTCCAAATTCTCCACCAGT +
Preference number: 5 (lower is better)
Translates to: PWGFFFIWESSAYEI*PSQWITHCSKFSTS
Trigger: ACTGGTGGAGAATTTGGAGCAGTGCGTGATCCACTGGCTGGGCCAGATTTCATATGCGCTGGATTCCCAGATGAAGAAGAAGCCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TCCAGGACGCTGTCAATCACAGGGTCGATGTACTCATCCACGTCGTaGAACAGGAAGGGGGTCCCATACTTTATGGACATCTCGAGCTGC +
Preference number: 5 (lower is better)
Translates to: SRTLSITGSMYSSTS*NRKGVPYFMDISSC
Trigger: GCAGCTCGAGATGTCCATAAAGTATGGGACCCCCTTCCTGTTCCACGACGTGGATGAGTACATCGACCCTGTGATTGACAGCGTCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TTCAGCGACAGCCCGAAGACCTCAAGGAAGGCTATGAGGGAGTACTaGTACATGGAGTTGACAAGCGCCATCTCCGACAGCACGAAGAAC +
Preference number: 5 (lower is better)
Translates to: FSDSPKTSRKAMREY*YMELTSAISDSTKN
Trigger: GTTCTTCGTGCTGTCGGAGATGGCGCTTGTCAACTCCATGTACCAGTACTCCCTCATAGCCTTCCTTGAGGTCTTCGGGCTGTCGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CCCACATGTCTCGAGCTGCCTGTGTGTAATAGCCAATCTCGGCATTaGAATGGAGACCAAACACTTCTGGTGTGTTGGCGAGTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PTCLELPVCNSQSRH*NGDQTLLVCWRVGG
Trigger: CCCTCCCACTCGCCAACACACCAGAAGTGTTTGGTCTCCATTCCAATGCCGAGATTGGCTATTACACACAGGCAGCTCGAGACATGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCGAATAGCATAGGGTaGGTGAGGTTGAAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASNSIG*VRLKAV
Trigger: CACTGCCTTCAACCTCACCAACCCTATGCTATTCGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAACATCGTCGATTCTCTaGGGGTCCCCTGTCACAGCC +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGTSSIL*GSPVTA
Trigger: GGCTGTGACAGGGGACCCCAAGAGAATCGACGATGT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGAGAACGGGAGAGAAGTaGATAATAAACGTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAERTGEK*IINVVP
Trigger: GGGGACCACGTTTATTATCAACTTCTCTCCCGTTCT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGCGTGAGCCTGGAGTaGATGTCGTCGGCATTCTTG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSVSLE*MSSAFL
Trigger: CAAGAATGCCGACGACATCAACTCCAGGCTCACGCT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGGACTTGGCATTTTCTaGCACGGTGCTGGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGGLGIF*HGAGQG
Trigger: CCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCGAGATGCTCTGCAAGTaGACTGTGTTGTCGTCCAAG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPEMLCK*TVLSSK
Trigger: CTTGGACGACAACACAGTCAACTTGCAGAGCATCTC...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCACTTGTGGACGGTTaGCAGGAAAGGCCCCACGAA +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGPLVDG*QERPHE
Trigger: TTCGTGGGGCCTTTCCTGCAAACCGTCCACAAGTGG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTTGGTGATGAGCCTGTaGGTCCTCCTCATTTCGTGT +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLLVMSL*VLLISC
Trigger: ACACGAAATGAGGAGGACCAACAGGCTCATCACCAA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCCTTGCTTGACCTTGTaGAAGACATCTTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEPCLTL*KTSSTS
Trigger: GGAAGTGGAAGATGTCTTCAACAAGGTCAAGCAAGG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCATGGTCTCGAACATTaGGACCACTTTATCCACCTG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEHGLEH*DHFIHL
Trigger: CAGGTGGATAAAGTGGTCCAAATGTTCGAGACCATG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTCATTATCCCAAGCTTaGTCTGGGCCTGACACAGAG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSLSQA*SGPDTE
Trigger: CTCTGTGTCAGGCCCAGACAAAGCTTGGGATAATGA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGCCTGAGGTCAGCATGTaGTTGATGAGTTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLPEVSM*LMSSRK
Trigger: CTTCCTGGAACTCATCAACAACATGCTGACCTCAGG...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCCTCCTTCCAGACGCTaGCACTGGGCTATGTTGTAC +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHPPSRR*HWAMLY
Trigger: GTACAACATAGCCCAGTGCAAGCGTCTGGAAGGAGG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCAGTCACGTCGGACTaGTCCAGCTTCTGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSVTSD*SSFCSS
Trigger: AGAGCTGCAGAAGCTGGACAAGTCCGACGTGACTGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATAGCCTCCAGTTCCTTTaGGATCGCTGCCAGCTCGTT +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSLQFL*DRCQLV
Trigger: AACGAGCTGGCAGCGATCCAAAAGGAACTGGAGGCT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATTTCGTTTGATCCAGTaGAGGGCCTGCTGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGFRLIQ*RACCWG
Trigger: CCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTTCTCCTCTTTTCGTTaGATCCAGTTGAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPFSSFR*IQLRAC
Trigger: GCAGGCCCTCAACTGGATCAAACGAAAAGAGGAGAA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGTTCTCGCTGGTCTCTaGGATGAGGTGCTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGVLAGL*DEVLPL
Trigger: CAGAGGGAGCACCTCATCCAAGAGACCAGCGAGAAC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCTGTGGCTTTGGACTaGGTCTCTTCCAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSVALD*VSSRVC
Trigger: GCAGACCCTGGAAGAGACCAAGTCCAAAGCCACAGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGGTCCTTCAGCCACTaGACCAGGAGGTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGRSFSH*TRRWQF
Trigger: GAACTGCCACCTCCTGGTCAAGTGGCTGAAGGACCT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCTGGAACTTGGTCACTaGTGTAAACAAGGTGGACCG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPLELGH*CKQGGP
Trigger: CGGTCCACCTTGTTTACACAAGTGACCAAGTTCCAG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATACCAGCACCTTGGGCTaGCTCTTGACAAGACACCCT +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHTSTLG*LLTRHP
Trigger: AGGGTGTCTTGTCAAGAGCAAGCCCAAGGTGCTGGT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp ACCATCTGCTCCAGGATCCAGGTGGTGCGGGTGGTATCCACTGTGTaGACCAGGATGTCGACAAATTTCTTCTCGTGGCTGTGCACGTAT +
Preference number: 5 (lower is better)
Translates to: TICSRIQVVRVVSTV*TRMSTNFFSWLCTY
Trigger: ATACGTGCACAGCCACGAGAAGAAATTTGTCGACATCCTGGTTCACACAGTGGATACCACCCGCACCACCTGGATCCTGGAGCAGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GAATCCAGCGCATATGAAATCTGGCCCAGCCAGTGGATCACGCACTaGTCCAAATTCTCCACCAGTTCTGGATTGGACACCAGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: ESSAYEIWPSQWITH*SKFSTSSGLDTSSD
Trigger: GTCAGAGCTGGTGTCCAATCCAGAACTGGTGGAGAATTTGGAGCAGTGCGTGATCCACTGGCTGGGCCAGATTTCATATGCGCTGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CCAATAAGGTACTTGAGGCTGCCCCAGGGGATGCGAGGGTCACGCTaGTGGAAGGCTTTCGTTAGGTACGTGTTTAGGATTTCCATACAG +
Preference number: 5 (lower is better)
Translates to: PIRYLRLPQGMRGSR*WKAFVRYVFRISIQ
Trigger: CTGTATGGAAATCCTAAACACGTACCTAACGAAAGCCTTCCAGCAGCGTGACCCTCGCATCCCCTGGGGCAGCCTCAAGTACCTTATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TCGGCACACGCGCTCAGCAATCTCCCAGGCGATGCGTTCCATGAGTaGGATCATCCTCTCGTCTCTGTTGTAGTGTCTAGAAATGATCCA +
Preference number: 5 (lower is better)
Translates to: SAHALSNLPGDAFHE*DHPLVSVVVSRNDP
Trigger: TGGATCATTTCTAGACACTACAACAGAGACGAGAGGATGATCCCACTCATGGAACGCATCGCCTGGGAGATTGCTGAGCGCGTGTGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp ACCTTGGTCAGCAGAGGCCCGATAGCCATGTACCACCGGACCATGTaGTCCACATCCCTGGCCCTTTCTCGTTCAATGTACTCAAAGAAT +
Preference number: 5 (lower is better)
Translates to: TLVSRGPIAMYHRTM*STSLALSRSMYSKN
Trigger: ATTCTTTGAGTACATTGAACGAGAAAGGGCCAGGGATGTGGACCACATGGTCCGGTGGTACATGGCTATCGGGCCTCTGCTGACCAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp AGTAGAACTGCAGCTTCTCATCGTAGGCCACGCAGGCTGGTTTCTTaGCCGCAAACTTCTCCATCACGATGGACTTGTCCAGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SRTAASHRRPRRLVS*PQTSPSRWTCPASR
Trigger: TCTGGAAGCTGGACAAGTCCATCGTGATGGAGAAGTTTGCGGCCAAGAAACCAGCCTGCGTGGCCTACGATGAGAAGCTGCAGTTCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CAGGTCGTGGAGGCGGTTTGGGGCCTCACAGCAGCGCTTTATCACTaGGTCTTTCAATGTCTCCCCCATGATCCTCTTAAATATCCTGTC +
Preference number: 5 (lower is better)
Translates to: QVVEAVWGLTAALYH*VFQCLPHDPLKYPV
Trigger: GACAGGATATTTAAGAGGATCATGGGGGAGACATTGAAAGACCCAGTGATAAAGCGCTGCTGTGAGGCCCCAAACCGCCTCCACGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp GAATCCAACATCCTGGTTAACTGGGTCACCATATTTAGGTCTGTCTaGGGAACCACCATCTTCAGCTTCTCCCCTTGCCTCCCGTCCACG +
Preference number: 5 (lower is better)
Translates to: ESNILVNWVTIFRSV*GTTIFSFSPCLPST
Trigger: CGTGGACGGGAGGCAAGGGGAGAAGCTGAAGATGGTGGTTCCCCAGACAGACCTAAATATGGTGACCCAGTTAACCAGGATGTTGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp ATAAGGTACTTGAGGCTGCCCCAGGGGATGCGAGGGTCACGCTGCTaGAAGGCTTTCGTTAGGTACGTGTTTAGGATTTCCATACAGACC +
Preference number: 5 (lower is better)
Translates to: IRYLRLPQGMRGSRC*KAFVRYVFRISIQT
Trigger: GGTCTGTATGGAAATCCTAAACACGTACCTAACGAAAGCCTTCCAGCAGCGTGACCCTCGCATCCCCTGGGGCAGCCTCAAGTACCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp ACCACCGAGGTGGGTGTGATGCTCAAGCCCAGGTGCTTCCGAACCTaGTCCAGGTCAAAGATCTTGGGCATCTTGTTCTCAATGTCTTTG +
Preference number: 5 (lower is better)
Translates to: TTEVGVMLKPRCFRT*SRSKILGILFSMSL
Trigger: CAAAGACATTGAGAACAAGATGCCCAAGATCTTTGACCTGGACCAGGTTCGGAAGCACCTGGGCTTGAGCATCACACCCACCTCGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATAGGGTTGGTGAGGTaGAAGGCAGTGTATACGCGG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGIGLVR*KAVYTR
Trigger: CCGCGTATACACTGCCTTCAACCTCACCAACCCTAT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCTGGGCATCTCCAGTTaGATCTCACCTTCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHLGISS*ISPSSC
Trigger: GCAGCTTGAAGGTGAGATCAAACTGGAGATGCCCAG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCCACCAGTTCTGGATaGGACACCAGCTCTGACATG +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSTSSG*DTSSDM
Trigger: CATGTCAGAGCTGGTGTCCAATCCAGAACTGGTGGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCAGCCAGAGGGCCATaGCCCTGGGGCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSARGP*PWGFFF
Trigger: GAAGAAGAAGCCCCAGGGCAATGGCCCTCTGGCTGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGACCAGAACTTCAAGCTaGAAGTCCTCCATCACGTAT +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAETRTSS*KSSITY
Trigger: ATACGTGATGGAGGACTTCAAGCTTGAAGTTCTGGT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058440.12
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCAGAACGGGAGAGAAGTaGATAATAAACGTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPRTGEK*IINVVP
Trigger: GGGGACCACGTTTATTATCAACTTCTCTCCCGTTCT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGTATACCTGAGGAATTaGTCTTCCTGGAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGVYLRN*SSWRAT
Trigger: CGTGGCCCTCCAGGAAGACAAATTCCTCAGGTATAC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGTATACCTGAGGAATTaGTCTTCCTGGAGGGCCACG +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHVYLRN*SSWRAT
Trigger: CGTGGCCCTCCAGGAAGACAAATTCCTCAGGTATAC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCAAGATGGTTTCCGCTaGGAACAGAGGGACATTTCT +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAQDGFR*EQRDIS
Trigger: AGAAATGTCCCTCTGTTCCAAGCGGAAACCATCTTG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGAGATCACCCAGGACTaGGCATTTTCTTGCACGGTG +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHEITQD*AFSCTV
Trigger: CACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCTC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGTTATTAACCAGTTCTaGCTCCGTGTCTGTGGGAAA +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEVINQF*LRVCGK
Trigger: TTTCCCACAGACACGGAGCAAGAACTGGTTAATAAC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTGCTTGTCCCCTTGCTaGACCTTGTTGAAGACATCT +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPACLSPC*TLLKTS
Trigger: AGATGTCTTCAACAAGGTCAAGCAAGGGGACAAGCA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTTCTTCATGGCCTGCTaGTCCCCTTGCTTGACCTTG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGFFMAC*SPCLTL
Trigger: CAAGGTCAAGCAAGGGGACAAGCAGGCCATGAAGAA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTTCTTCCTGTCGTTTTaGCTCAGCTCCATGGTGATC +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPFFLSF*LSSMVI
Trigger: GATCACCATGGAGCTGAGCAAAAACGACAGGAAGAA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTTCTTCCTGTCGTTTTaGCTCAGCTCCATGGTGATC +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAFFLSF*LSSMVI
Trigger: GATCACCATGGAGCTGAGCAAAAACGACAGGAAGAA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGCTTTGGCGAGGTCCTaGGTGGTCTCTGTCTTGCCG +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGALARS*VVSVLP
Trigger: CGGCAAGACAGAGACCACCAAGGACCTCGCCAAAGC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTCAGCGCATTGCGGATaGTCTGGATCTGAGACGAGA +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSAHCG*SGSETR
Trigger: TCTCGTCTCAGATCCAGACAATCCGCAATGCGCTGA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCCTCGTTCAGGTTTTaGAGGAAGTTCTGGGTAGTG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASSFRF*RKFWVV
Trigger: CACTACCCAGAACTTCCTCAAAAACCTGAACGAGGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTTGCACTGGGCTATGTaGTACTGGGTTTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAELHWAM*YWVFSS
Trigger: AGATGAGAAAACCCAGTACAACATAGCCCAGTGCAA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGGAAGTCGGGGTCATaGAAGGAAGCAACCCGTAGG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGRKSGS*KEATRR
Trigger: CCTACGGGTTGCTTCCTTCAATGACCCCGACTTCCT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGAGTCCTCCAGGTCCTaGAGCAGGTTCTTGTTCTCG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGESSRS*SRFLFS
Trigger: CGAGAACAAGAACCTGCTCAAGGACCTGGAGGACTC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATCTGTGGCTTTGGACTaGGTCTCTTCCAGGGTCTGC +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGSVALD*VSSRVC
Trigger: GCAGACCCTGGAAGAGACCAAGTCCAAAGCCACAGA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGAAACCTCTGTGGCTTaGGACTTGGTCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHETSVA*DLVSSR
Trigger: CCTGGAAGAGACCAAGTCCAAAGCCACAGAGGTTTC...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTACTGGTACATGGAGTaGACAAGCGCCATCTCCGAC +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHYWYME*TSAISD
Trigger: GTCGGAGATGGCGCTTGTCAACTCCATGTACCAGTA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCATGGTTTCTTCCACTaGCTCTTCTCCAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEHGFFH*LFSREM
Trigger: CATTTCTCTGGAGAAGAGCAAGTGGAAGAAACCATG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGCACCTTTTCTTGGCCTaGACCCATTGCAAGAAACTT +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEHLFLA*THCKKL
Trigger: AAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGTG...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAACGTTCCAGCCGATCTaGCCAAACTTCCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGTFQPI*PNFLLS
Trigger: GGAGAGGAGGAAGTTTGGCAAGATCGGCTGGAACGT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCGGCATCCTGGAACTaGGTCACTTGTGTAAACAAG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASASWN*VTCVNK
Trigger: CTTGTTTACACAAGTGACCAAGTTCCAGGATGCCGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTCGGCATCCTGGAACTaGGTCACTTGTGTAAACAAG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSASWN*VTCVNK
Trigger: CTTGTTTACACAAGTGACCAAGTTCCAGGATGCCGA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATACCTTGGGCTTGCTCTaGACAAGACACCCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHTLGLL*TRHPLS
Trigger: AGAGAGAGGGTGTCTTGTCAAGAGCAAGCCCAAGGT...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GGTGGACCAGAGTTTCGAACTTGCCGATGGCCTGCTTGCAGCGAGTaGTGTAGTCAGAGATTCCTAGTGAGTTCCAGTTCAGCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: GGPEFRTCRWPACSE*CSQRFLVSSSSASC
Trigger: ACAAGAGGCTGAACTGGAACTCACTAGGAATCTCTGACTACATCACTCGCTGCAAGCAGGCCATCGGCAAGTTCGAAACTCTGGTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp TCTCCAGGTACATCCACTTCCTCTGAACCAGCATCCAGATCTCAATaGCCTCGCCTATCAGAGACAGTGTCTTCTCCCACTTGTGGACGG +
Preference number: 5 (lower is better)
Translates to: SPGTSTSSEPASRSQ*PRLSETVSSPTCGR
Trigger: CCGTCCACAAGTGGGAGAAGACACTGTCTCTGATAGGCGAGGTCATTGAGATCTGGATGCTGGTTCAGAGGAAGTGGATGTACCTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp ATGGAGTTATCGCCTAAAAACGACTTGGCCACTGCATGCAAGGCCTaGGGTGGCCAGGGCATGAACCAATCAATGCCGGTGTTGTTCACT +
Preference number: 5 (lower is better)
Translates to: MELSPKNDLATACKA*GGQGMNQSMPVLFT
Trigger: AGTGAACAACACCGGCATTGATTGGTTCATGCCCTGGCCACCTCAGGCCTTGCATGCAGTGGCCAAGTCGTTTTTAGGCGATAACTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TTCTTCATGAGGGTTGGGAGGCTCTGCTCTGTGGTCTCCTTCCAATaGTCATACTTCCCGTCTTCATACTCCTTCATCTTCCTCCCCACC +
Preference number: 5 (lower is better)
Translates to: FFMRVGRLCSVVSFQ*SYFPSSYSFIFLPT
Trigger: GGTGGGGAGGAAGATGAAGGAGTATGAAGACGGGAAGTATGAGCATTGGAAGGAGACCACAGAGCAGAGCCTCCCAACCCTCATGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GTGGCTGTCTTAGAAGTGCCGGATTCACCCACAAAAAGAACAGGGTaGTTGATTTTAACCATCTGCTCCAGGATCCAGGTGGTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: VAVLEVPDSPTKRTG*LILTICSRIQVVRV
Trigger: CACCCGCACCACCTGGATCCTGGAGCAGATGGTTAAAATCAAGCACCCTGTTCTTTTTGTGGGTGAATCCGGCACTTCTAAGACAGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GGATGGTCGCCTCCTTCAGCTTGTCCAGCCCTCCTTCCAGACGCTTaGACTGGGCTATGTTGTACTGGGTTTTCTCATCTAGTAGTTTTG +
Preference number: 5 (lower is better)
Translates to: GWSPPSACPALLPDA*TGLCCTGFSHLVVL
Trigger: CAAAACTACTAGATGAGAAAACCCAGTACAACATAGCCCAGTGCAAGCGTCTGGAAGGAGGGCTGGACAAGCTGAAGGAGGCGACCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp AGCGATGATCTTGTTCTGCTCTTCGATCTCTATGGCCTTCTCCTCTaGCAGCTTCTTCTTCTCCTCCGCTATGGCTGTGTTGGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: SDDLVLLFDLYGLLL*QLLLLLRYGCVGGD
Trigger: ATCGCCACCAACACAGCCATAGCGGAGGAGAAGAAGAAGCTGGCAGAGGAGAAGGCCATAGAGATCGAAGAGCAGAACAAGATCATCGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TCGTGGAACAGGAAGGGGGTCCCATACTTTATGGACATCTCGAGCTaGTTCAGGAAGTCGGGGTCATTGAAGGAAGCAACCCGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: SWNRKGVPYFMDISS*FRKSGSLKEATRRL
Trigger: TAACCTACGGGTTGCTTCCTTCAATGACCCCGACTTCCTGAAGCAGCTCGAGATGTCCATAAAGTATGGGACCCCCTTCCTGTTCCACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TTCTCAAATTTCTGCAGATTCATTAAGAACTCATCGCGGATCAGTTaGACGCTGTGGTACTCCATCGGCTCCCCCGGGATGACCACCGAC +
Preference number: 5 (lower is better)
Translates to: FSNFCRFIKNSSRIS*TLWYSIGSPGMTTD
Trigger: GTCGGTGGTCATCCCGGGGGAGCCGATGGAGTACCACAGCGTCCAACTGATCCGCGATGAGTTCTTAATGAATCTGCAGAAATTTGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp AATCTTGGAGTAGAACTGCAGCTTCTCATCGTAGGCCACGCAGGCTaGTTTCTTGGCCGCAAACTTCTCCATCACGATGGACTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: NLGVELQLLIVGHAG*FLGRKLLHHDGLVQ
Trigger: CTGGACAAGTCCATCGTGATGGAGAAGTTTGCGGCCAAGAAACCAGCCTGCGTGGCCTACGATGAGAAGCTGCAGTTCTACTCCAAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TTGCGGAGGTTCTTGAGGAAGCCCTCGATACCTTCCTGCAGATACTaGACATTCAGGTTGATCCAGAGGGTCTGGGACCATTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LRRFLRKPSIPSCRY*TFRLIQRVWDHSSL
Trigger: CAAAGAGGAATGGTCCCAGACCCTCTGGATCAACCTGAATGTCCAGTATCTGCAGGAAGGTATCGAGGGCTTCCTCAAGAACCTCCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TCAAGGATGCTGCCCCGGATGAAGGAATCCACGATGTCCCGGGCGTaGACATCGATGATCAGGACAGTGTTGTATTTCTTCCTGTCGTTT +
Preference number: 5 (lower is better)
Translates to: SRMLPRMKESTMSRA*TSMIRTVLYFFLSF
Trigger: AAACGACAGGAAGAAATACAACACTGTCCTGATCATCGATGTCCACGCCCGGGACATCGTGGATTCCTTCATCCGGGGCAGCATCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TTTGGATCGCTGCCAGCTCGTTCTGGATCCTCTCTAGCTCCCGTTTaGTTAGGAAGAAATTCCGCTCCAGCCTGGCCACCTTTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: FGSLPARSGSSLAPV*LGRNSAPAWPPFLF
Trigger: AAAGAGAAAAGGTGGCCAGGCTGGAGCGGAATTTCTTCCTAACCAAACGGGAGCTAGAGAGGATCCAGAACGAGCTGGCAGCGATCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTCGAATAGCATAGGGTaGGTGAGGTTGAAGGCAGTG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSNSIG*VRLKAV
Trigger: CACTGCCTTCAACCTCACCAACCCTATGCTATTCGA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGAAAAACCACATTCTGTaGCAAAAACTCCTCGGGAAG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEKNHIL*QKLLGK
Trigger: CTTCCCGAGGAGTTTTTGCAACAGAATGTGGTTTTT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACTGGGCATCTCCAGTTaGATCTCACCTTCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGLGISS*ISPSSC
Trigger: GCAGCTTGAAGGTGAGATCAAACTGGAGATGCCCAG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCATGGACTCTGCTTCTTaGATCACCTCTAAGACCTTC +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAMDSAS*ITSKTF
Trigger: GAAGGTCTTAGAGGTGATCAAAGAAGCAGAGTCCAT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCCATCACGATGGACTaGTCCAGCTTCCAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSITMD*SSFQRG
Trigger: GCCCCTCTGGAAGCTGGACAAGTCCATCGTGATGGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCTCTTCTTAAGATTCTaGGCCAGGTGCTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPALFLRF*ARCSIS
Trigger: TGAGATTGAGCACCTGGCCAAGAATCTTAAGAAGAG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCTGTGAAAGTTCGCTaGATGCCCCCAAGGGCGTGC +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSVKVR*MPPRAC
Trigger: GCACGCCCTTGGGGGCATCAAGCGAACTTTCACAGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTGGGACCATTCCTCTTaGGCAAGCTTCAGAGAGTTG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGWDHSS*ASFREL
Trigger: CAACTCTCTGAAGCTTGCCAAAGAGGAATGGTCCCA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGAGATGCTCTGCAAGTaGACTGTGTTGTCGTCCAAG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGEMLCK*TVLSSK
Trigger: CTTGGACGACAACACAGTCAACTTGCAGAGCATCTC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACCACTTGTGGACGGTTaGCAGGAAAGGCCCCACGAA +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGPLVDG*QERPHE
Trigger: TTCGTGGGGCCTTTCCTGCAAACCGTCCACAAGTGG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTTGGTGATGAGCCTGTaGGTCCTCCTCATTTCGTGT +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGLVMSL*VLLISC
Trigger: ACACGAAATGAGGAGGACCAACAGGCTCATCACCAA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTCATTATCCCAAGCTTaGTCTGGGCCTGACACAGAG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGSLSQA*SGPDTE
Trigger: CTCTGTGTCAGGCCCAGACAAAGCTTGGGATAATGA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGTCCGAGAGGAGAAGTaGACTATCAGAACAATATTG +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEVREEK*TIRTIL
Trigger: CAATATTGTTCTGATAGTCAACTTCTCCTCTCGGAC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGGTGGGAGGCAGATCTaGAACGATGTTTTTGTAAAG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAGGRQI*NDVFVK
Trigger: CTTTACAAAAACATCGTTCAAGATCTGCCTCCCACC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGAGGTCAGCATGTTGTaGATGAGTTCCAGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGEVSML*MSSRKP
Trigger: GGGCTTCCTGGAACTCATCAACAACATGCTGACCTC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCCTGAGGTCAGCATGTaGTTGATGAGTTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGPEVSM*LMSSRK
Trigger: CTTCCTGGAACTCATCAACAACATGCTGACCTCAGG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATTCTGCAGCTCTAGTTaGGCAGCCTCCAGGATGGGC +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGFCSSS*AASRMG
Trigger: GCCCATCCTGGAGGCTGCCAAACTAGAGCTGCAGAA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAACAGACTGTCTGCACTaGCTTCGGGGGCTTCGCGAA +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGTDCLH*LRGLRE
Trigger: TTCGCGAAGCCCCCGAAGCAAGTGCAGACAGTCTGT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTTTGATGTTCTTCACTaGACCCTGGGTGATGGAATC +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLFDVLH*TLGDGI
Trigger: GATTCCATCACCCAGGGTCAAGTGAAGAACATCAAA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTTTGATGTTCTTCACTaGACCCTGGGTGATGGAATC +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPFDVLH*TLGDGI
Trigger: GATTCCATCACCCAGGGTCAAGTGAAGAACATCAAA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCCTCCATCTCTTCGATaGTGGTGTTCAGAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPPPSLR*WCSESL
Trigger: TAAAGACTCTGAACACCACAATCGAAGAGATGGAGG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGTTTTCTCTTTTGGGCTaGATCTCCCGAAACACATCA +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEFSLLG*ISRNTS
Trigger: TGATGTGTTTCGGGAGATCAAGCCCAAAAGAGAAAA...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTTCTCCTCTTTTCGTTaGATCCAGTTGAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGFSSFR*IQLRAC
Trigger: GCAGGCCCTCAACTGGATCAAACGAAAAGAGGAGAA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGTTGGCCAGCTTGGTATaGAGGTACAGCCGGAAATTC +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGLASLV*RYSRKF
Trigger: GAATTTCCGGCTGTACCTCAATACCAAGCTGGCCAA...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAGGGGAGTATCTAGGATaGGCCAGCTTGGTATTGAGG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGGEYLG*ASLVLR
Trigger: CCTCAATACCAAGCTGGCCAATCCTAGATACTCCCC...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATCCTTGAGCAGGTTCTaGTTCTCGCTGGTCTCTTGG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGSLSRF*FSLVSW
Trigger: CCAAGAGACCAGCGAGAACAAGAACCTGCTCAAGGA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCCATGGTTTCTTCCACTaGCTCTTCTCCAGAGAAATG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAHGFFH*LFSREM
Trigger: CATTTCTCTGGAGAAGAGCAAGTGGAAGAAACCATG...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCCACCTTTTCTTGGCCTaGACCCATTGCAAGAAACTT +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPHLFLA*THCKKL
Trigger: AAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGTG...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAGGTCCTTCAGCCACTaGACCAGGAGGTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGRSFSH*TRRWQF
Trigger: GAACTGCCACCTCCTGGTCAAGTGGCTGAAGGACCT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCCAGGTCAAAGATCTaGGGCATCTTGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASRSKI*GILFSM
Trigger: CATTGAGAACAAGATGCCCAAGATCTTTGACCTGGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCTCCAGGTCAAAGATCTaGGGCATCTTGTTCTCAATG +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPSRSKI*GILFSM
Trigger: CATTGAGAACAAGATGCCCAAGATCTTTGACCTGGA...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAGCCCCACATCATCTAACTCATaGCTCATTCCGACTTCCCCA +
Preference number: 5 (lower is better)
Translates to: NQHQTPFMTIPPSPEGSPTSSNS*LIPTSP
Trigger: TGGGGAAGTCGGAATGAGCAATGAGTTAGATGATGT...GGGGCTTCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GAGGAAGGTTCCCAAAGATGTCGGAAAACTTTTGTGACAGGAGAATaGTGTCTTCCCAGCCCTGGTCCGACAGCCAGGTGCATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: EEGSQRCRKTFVTGE*CLPSPGPTARCMVS
Trigger: AGAAACCATGCACCTGGCTGTCGGACCAGGGCTGGGAAGACATCATTCTCCTGTCACAAAAGTTTTCCGACATCTTTGGGAACCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GGTCTACTCGGAAACAGCGTAAAATCAGCAGTTTCTGGAAAGCAGTaGTGTTATCATCGTAGCCCAGGGGGAACGGGAACTGCTCGAGTG +
Preference number: 5 (lower is better)
Translates to: GLLGNSVKSAVSGKQ*CYHRSPGGTGTARV
Trigger: CACTCGAGCAGTTCCCGTTCCCCCTGGGCTACGATGATAACATCACTGCTTTCCAGAAACTGCTGATTTTACGCTGTTTCCGAGTAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CCTAACAAATGGAAGCTTCGTCTGCTCGTAGAGGGCGCTCAGCGTTaGATTTCTCTCTCTCCAGAATTCGATTTCAGCCAGAGGGCCATT +
Preference number: 5 (lower is better)
Translates to: PNKWKLRLLVEGAQR*ISLSPEFDFSQRAI
Trigger: AATGGCCCTCTGGCTGAAATCGAATTCTGGAGAGAGAGAAATGCAACGCTGAGCGCCCTCTACGAGCAGACGAAGCTTCCATTTGTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp GTAGTCTGTTCTCTCAAACAATCGCTTCCGGTCAAACTCCCATCGTaGCTCCCGACCAGAAGCCTCAATCTTGGCCCGAATATCGAAGTA +
Preference number: 5 (lower is better)
Translates to: VVCSLKQSLPVKLPS*LPTRSLNLGPNIEV
Trigger: TACTTCGATATTCGGGCCAAGATTGAGGCTTCTGGTCGGGAGGCACGATGGGAGTTTGACCGGAAGCGATTGTTTGAGAGAACAGACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CTTGGTGTTGACTTCGTTGTACTCCTCGAGGATTTCCTCAAACAGTaGCTTGGCGGCCTCGTAGTCCTGGATGTCTTCATAAATGCGTGG +
Preference number: 5 (lower is better)
Translates to: LGVDFVVLLEDFLKQ*LGGLVVLDVFINAW
Trigger: CCACGCATTTATGAAGACATCCAGGACTACGAGGCCGCCAAGGCACTGTTTGAGGAAATCCTCGAGGAGTACAACGAAGTCAACACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TTTAGGAAGAAGTCTAACTCCTCCTGGGGGACCCTCCCCTCTGCCTaGTCTATCTTGATGGTCATGTTGAAGGAGAAGAGGAGCTTATGC +
Preference number: 5 (lower is better)
Translates to: FRKKSNSSWGTLPSA*SILMVMLKEKRSLC
Trigger: GCATAAGCTCCTCTTCTCCTTCAACATGACCATCAAGATAGAGCAGGCAGAGGGGAGGGTCCCCCAGGAGGAGTTAGACTTCTTCCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TTCTTCATCTGGGAATCCAGCGCATATGAAATCTGGCCCAGCCAGTaGATCACGCACTGCTCCAAATTCTCCACCAGTTCTGGATTGGAC +
Preference number: 5 (lower is better)
Translates to: FFIWESSAYEIWPSQ*ITHCSKFSTSSGLD
Trigger: GTCCAATCCAGAACTGGTGGAGAATTTGGAGCAGTGCGTGATCCACTGGCTGGGCCAGATTTCATATGCGCTGGATTCCCAGATGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp AGCTGTGATGATATTCTTGGTGAGCAGGCTCTTCTTCATGAGGGTTaGGAGGCTCTGCTCTGTGGTCTCCTTCCAATGCTCATACTTCCC +
Preference number: 5 (lower is better)
Translates to: SCDDILGEQALLHEG*EALLCGLLPMLILP
Trigger: GGGAAGTATGAGCATTGGAAGGAGACCACAGAGCAGAGCCTCCCAACCCTCATGAAGAAGAGCCTGCTCACCAAGAATATCATCACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp CAGAGTGACAGTATAGTTGATGACCATGGCCTTCCCAAACACCGATaGGGAGTATCTAGGATTGGCCAGCTTGGTATTGAGGTACAGCCG +
Preference number: 5 (lower is better)
Translates to: QSDSIVDDHGLPKHR*GVSRIGQLGIEVQP
Trigger: CGGCTGTACCTCAATACCAAGCTGGCCAATCCTAGATACTCCCCATCGGTGTTTGGGAAGGCCATGGTCATCAACTATACTGTCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TGCTCAAGCCCAGGTGCTTCCGAACCTGGTCCAGGTCAAAGATCTTaGGCATCTTGTTCTCAATGTCTTTGGCAACCTGGCCAATGTAGT +
Preference number: 5 (lower is better)
Translates to: CSSPGASEPGPGQRS*ASCSQCLWQPGQCS
Trigger: ACTACATTGGCCAGGTTGCCAAAGACATTGAGAACAAGATGCCCAAGATCTTTGACCTGGACCAGGTTCGGAAGCACCTGGGCTTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACGCTCCTGGATGTCCTaGTACCTCAGCTCCATGACT +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGRSWMS*YLSSMT
Trigger: AGTCATGGAGCTGAGGTACAAGGACATCCAGGAGCG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGGTTCTTCTCGTGCTTaGCCAATTCCTTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAGSSRA*PIPFQN
Trigger: GTTTTGAAAAGGAATTGGCAAAGCACGAGAAGAACC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAATCTCCTTCTGCACCTaGATGAGCTCAGGGTACATG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGISFCT*MSSGYM
Trigger: CATGTACCCTGAGCTCATCAAGGTGCAGAAGGAGAT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGGGACCATTCCTCTTaGGCAAGCTTCAGAGAGTTG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGWDHSS*ASFREL
Trigger: CAACTCTCTGAAGCTTGCCAAAGAGGAATGGTCCCA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCATGGTCTCGAACATTaGGACCACTTTATCCACCTG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGHGLEH*DHFIHL
Trigger: CAGGTGGATAAAGTGGTCCAAATGTTCGAGACCATG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCAAAAGAACAGGGTGCTaGATTTTAACCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAKRTGC*ILTICS
Trigger: GGAGCAGATGGTTAAAATCAAGCACCCTGTTCTTTT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTCCTCGTTCAGGTTTTaGAGGAAGTTCTGGGTAGTG +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHSSFRF*RKFWVV
Trigger: CACTACCCAGAACTTCCTCAAAAACCTGAACGAGGA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGACTATCAGAACAATATaGGTCTCCTCGTTCAGGTTT +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAETIRTI*VSSFRF
Trigger: AAACCTGAACGAGGAGACCAATATTGTTCTGATAGT...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACCTCCTTCCAGACGCTaGCACTGGGCTATGTTGTAC +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGPPSRR*HWAMLY
Trigger: GTACAACATAGCCCAGTGCAAGCGTCTGGAAGGAGG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGTTTTCTCTTTTGGGCTaGATCTCCCGAAACACATCA +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLFSLLG*ISRNTS
Trigger: TGATGTGTTTCGGGAGATCAAGCCCAAAAGAGAAAA...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGATCTTGATGGTCATGTaGAAGGAGAAGAGGAGCTTA +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLILMVM*KEKRSL
Trigger: TAAGCTCCTCTTCTCCTTCAACATGACCATCAAGAT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAACGTTCCAGCCGATCTaGCCAAACTTCCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGTFQPI*PNFLLS
Trigger: GGAGAGGAGGAAGTTTGGCAAGATCGGCTGGAACGT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCTCCAATAAGGTACTaGAGGCTGCCCCAGGGGATG +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSPIRY*RLPQGM
Trigger: CATCCCCTGGGGCAGCCTCAAGTACCTTATTGGAGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp TGTCCCCATCGTGGAAGCGCAGCATGGCTATGTTATCATACATCTTaGTCATATGCTCTTGCACGCACAGTGGGTCACTGTTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: CPHRGSAAWLCYHTS*SYALARTVGHCCPR
Trigger: TCTTGGGCAACAGTGACCCACTGTGCGTGCAAGAGCATATGATCAAGATGTATGATAACATAGCCATGCTGCGCTTCCACGATGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GGACAGTGTTGTATTTCTTCCTGTCGTTTTTGCTCAGCTCCATGGTaGTCCGCGTCACCAGGTCATCAATCTGGCTGTGCATCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: GQCCISSCRFCSAPW*SASPGHQSGCASSC
Trigger: GCAAGAAGATGCACAGCCAGATTGATGACCTGGTGACGCGGATCACCATGGAGCTGAGCAAAAACGACAGGAAGAAATACAACACTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp CTGTCCAGTCTCGAGTGGTGGGATCCAGGATGCCATACAGCTCAATaGCACTCACGGCTTTGGGGTTCAGGATGTACAACTTTGTCATTA +
Preference number: 5 (lower is better)
Translates to: LSSLEWWDPGCHTAQ*HSRLWGSGCTTLSL
Trigger: TAATGACAAAGTTGTACATCCTGAACCCCAAAGCCGTGAGTGTCATTGAGCTGTATGGCATCCTGGATCCCACCACTCGAGACTGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp ATATTCTTGGTGAGCAGGCTCTTCTTCATGAGGGTTGGGAGGCTCTaGTCTGTGGTCTCCTTCCAATGCTCATACTTCCCGTCTTCATAC +
Preference number: 5 (lower is better)
Translates to: IFLVSRLFFMRVGRL*SVVSFQCSYFPSSY
Trigger: GTATGAAGACGGGAAGTATGAGCATTGGAAGGAGACCACAGAGCAGAGCCTCCCAACCCTCATGAAGAAGAGCCTGCTCACCAAGAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CTTCCCAGCCCTGGTCCGACAGCCAGGTGCATGGTTTCTTCCACTTaGTCTTCTCCAGAGAAATGTTCCCTTTTAGGAAGAAGTCTAACT +
Preference number: 5 (lower is better)
Translates to: LPSPGPTARCMVSST*SSPEKCSLLGRSLT
Trigger: AGTTAGACTTCTTCCTAAAAGGGAACATTTCTCTGGAGAAGAGCAAGTGGAAGAAACCATGCACCTGGCTGTCGGACCAGGGCTGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TTTCTCTCTCTCCAGAATTCGATTTCAGCCAGAGGGCCATTGCCCTaGGGCTTCTTCTTCATCTGGGAATCCAGCGCATATGAAATCTGG +
Preference number: 5 (lower is better)
Translates to: FLSLQNSISARGPLP*GFFFIWESSAYEIW
Trigger: CCAGATTTCATATGCGCTGGATTCCCAGATGAAGAAGAAGCCCCAGGGCAATGGCCCTCTGGCTGAAATCGAATTCTGGAGAGAGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCCACCAGTTCTGGATaGGACACCAGCTCTGACATG +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSTSSG*DTSSDM
Trigger: CATGTCAGAGCTGGTGTCCAATCCAGAACTGGTGGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATGGACTCTGCTTCTTaGATCACCTCTAAGACCTTC +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGMDSAS*ITSKTF
Trigger: GAAGGTCTTAGAGGTGATCAAAGAAGCAGAGTCCAT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATCTGAGGATCAGAGAGTaGAAAGCCTGTAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHLRIRE*KACRFF
Trigger: GAAGAATCTACAGGCTTTCAACTCTCTGATCCTCAG...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGCTGAGGATCAGAGAGTaGAAAGCCTGTAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGLRIRE*KACRFF
Trigger: GAAGAATCTACAGGCTTTCAACTCTCTGATCCTCAG...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAATGTTGTCAAACTTCTaGGCCTCCTCAGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGMLSNF*ASSGSW
Trigger: CCAGCTGCCTGAGGAGGCCAAGAAGTTTGACAACAT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCTTGCTTGACCTTGTaGAAGACATCTTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGPCLTL*KTSSTS
Trigger: GGAAGTGGAAGATGTCTTCAACAAGGTCAAGCAAGG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGATGATCAGGACAGTGTaGTATTTCTTCCTGTCGTTT +
Preference number: 5 (lower is better)
Translates to: YSLPFLGSASSSGLPHMLMIRTV*YFFLSF
Trigger: AAACGACAGGAAGAAATACAACACTGTCCTGATCAT...CAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCATGATCAGGACAGTGTaGTATTTCTTCCTGTCGTTT +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAMIRTV*YFFLSF
Trigger: AAACGACAGGAAGAAATACAACACTGTCCTGATCAT...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCAGCGCATTGCGGATaGTCTGGATCTGAGACGAGA +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSAHCG*SGSETR
Trigger: TCTCGTCTCAGATCCAGACAATCCGCAATGCGCTGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCTCAGGATGTACAACTTaGTCATTATCCCAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPASGCTT*SLSQAL
Trigger: CAAAGCTTGGGATAATGACAAAGTTGTACATCCTGA...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTTGCACTGGGCTATGTaGTACTGGGTTTTCTCATCT +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHLHWAM*YWVFSS
Trigger: AGATGAGAAAACCCAGTACAACATAGCCCAGTGCAA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATCGACAGCGATGATCTaGTTCTGCTCTTCGATCTCT +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGSTAMI*FCSSIS
Trigger: AGAGATCGAAGAGCAGAACAAGATCATCGCTGTCGA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGATGAACTGGCGGCCTaGGGAGGTCTTGATGTTCTT +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGDELAA*GGLDVL
Trigger: AAGAACATCAAGACCTCCCAAGGCCGCCAGTTCATC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAAACACGATGGGCGAATaGGGGGTGCTCTGCTCAAAA +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGNTMGE*GVLCSK
Trigger: TTTTGAGCAGAGCACCCCCAATTCGCCCATCGTGTT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATGCTGAGGAAGAAGTGGAATGGTaGAAAAGTATCGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: QSPILRKCQLLWPAAHAEEEVEW*KSIEDE
Trigger: TTCATCTTCGATACTTTTCAACCATTCCACTTCTTC...CTCAGCATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCCACAACCAGCACCTaGGGCTTGCTCTTGACAAGA +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSTTST*GLLLTR
Trigger: TCTTGTCAAGAGCAAGCCCAAGGTGCTGGTTGTGGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp CTTATCGATCTCGTTGGCGTTTGGGTGGAGAACGATTTCTGGAGCTaGCAAGATGGTTTCCGCTTGGAACAGAGGGACATTTCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: LIDLVGVWVENDFWS*QDGFRLEQRDISED
Trigger: ATCCTCAGAAATGTCCCTCTGTTCCAAGCGGAAACCATCTTGTCAGCTCCAGAAATCGTTCTCCACCCAAACGCCAACGAGATCGATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp TGCTCGAGTGAATCCTGGTCGTACCACTCCTGCCACATGGGGAGATaGTGTTCAATATCAAGAGGAAGGTTCCCAAAGATGTCGGAAAAC +
Preference number: 5 (lower is better)
Translates to: CSSESWSYHSCHMGR*CSISRGRFPKMSEN
Trigger: GTTTTCCGACATCTTTGGGAACCTTCCTCTTGATATTGAACATCATCTCCCCATGTGGCAGGAGTGGTACGACCAGGATTCACTCGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TTGCATTTCTCTCTCTCCAGAATTCGATTTCAGCCAGAGGGCCATTaGCCTGGGGCTTCTTCTTCATCTGGGAATCCAGCGCATATGAAA +
Preference number: 5 (lower is better)
Translates to: LHFSLSRIRFQPEGH*PGASSSSGNPAHMK
Trigger: TTTCATATGCGCTGGATTCCCAGATGAAGAAGAAGCCCCAGGGCAATGGCCCTCTGGCTGAAATCGAATTCTGGAGAGAGAGAAATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TTTTTCCATAGCTTGAGAGTGTTTCTAGCCTCCTGGGTCTTGAACTaGGCGTTTGCTCGGTTTTCCTTGAACAGGGTGCGTAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: FFHSLRVFLASWVLN*AFARFSLNRVRRLM
Trigger: CATCAACCTACGCACCCTGTTCAAGGAAAACCGAGCAAACGCGCAGTTCAAGACCCAGGAGGCTAGAAACACTCTCAAGCTATGGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp GGTCAAGATCCTCGATTTCTCCTTCTAGCAGCGAATCCAACATCCTaGTTAACTGGGTCACCATATTTAGGTCTGTCTGGGGAACCACCA +
Preference number: 5 (lower is better)
Translates to: GQDPRFLLLAANPTS*LTGSPYLGLSGEPP
Trigger: TGGTGGTTCCCCAGACAGACCTAAATATGGTGACCCAGTTAACCAGGATGTTGGATTCGCTGCTAGAAGGAGAAATCGAGGATCTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TTTCTTCTCGTGGCTGTGCACGTATTCAGGAACGAGCTTGTTCCATaGAATCCAGTGGTTCCGCTTGGCATCGAAATGAAAGTCGTACAG +
Preference number: 5 (lower is better)
Translates to: FLLVAVHVFRNELVP*NPVVPLGIEMKVVQ
Trigger: CTGTACGACTTTCATTTCGATGCCAAGCGGAACCACTGGATTCCATGGAACAAGCTCGTTCCTGAATACGTGCACAGCCACGAGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp TGTGTAATAGCCAATCTCGGCATTGGAATGGAGACCAAACACTTCTaGTGTGTTGGCGAGTGGGAGGGCCTCAATGGCTTCGACAAATTT +
Preference number: 5 (lower is better)
Translates to: CVIANLGIGMETKHF*CVGEWEGLNGFDKF
Trigger: AAATTTGTCGAAGCCATTGAGGCCCTCCCACTCGCCAACACACCAGAAGTGTTTGGTCTCCATTCCAATGCCGAGATTGGCTATTACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAATGACACTCACGGCTTaGGGGTTCAGGATGTACAAC +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGMTLTA*GFRMYN
Trigger: GTTGTACATCCTGAACCCCAAAGCCGTGAGTGTCAT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGGTCCGAGAGGAGAAGTaGACTATCAGAACAATATTG +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGVREEK*TIRTIL
Trigger: CAATATTGTTCTGATAGTCAACTTCTCCTCTCGGAC...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGACCTCCATCTCTTCGATaGTGGTGTTCAGAGTCTTTA +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGPPSLR*WCSESL
Trigger: TAAAGACTCTGAACACCACAATCGAAGAGATGGAGG...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATCTTGATGGTCATGTaGAAGGAGAAGAGGAGCTTA +
Preference number: 5 (lower is better)
Translates to: QGKSASNTFHDHPTQPGGILMVM*KEKRSL
Trigger: TAAGCTCCTCTTCTCCTTCAACATGACCATCAAGAT...CCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp CCCCCTGAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGAAGAAGTGGAATGGTaGAAAAGTATCGAAGATGAA +
Preference number: 5 (lower is better)
Translates to: PPEIQSPILRKCQLLWPAEEVEW*KSIEDE
Trigger: TTCATCTTCGATACTTTTCAACCATTCCACTTCTTC...GGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTCAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAACATCATCTAACTCATaGCTCATTCCGACTTCCCCA +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGTSSNS*LIPTSP
Trigger: TGGGGAAGTCGGAATGAGCAATGAGTTAGATGATGT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GGGAGAGAAGTTGATAATAAACGTGGTCCCCCTGTCTATGATCGCTaGGTCCTCAGCTGTGATGATATTCTTGGTGAGCAGGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GREVDNKRGPPVYDR*VLSCDDILGEQALL
Trigger: AAGAAGAGCCTGCTCACCAAGAATATCATCACAGCTGAGGACTCAGCGATCATAGACAGGGGGACCACGTTTATTATCAACTTCTCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp ATTGTGGTGTTCAGAGTCTTTAGGAGGCCTTTGATGTTCTTCACTTaGCCCTGGGTGATGGAATCGAAGTCGATTTCCATCAGGGACCTC +
Preference number: 5 (lower is better)
Translates to: IVVFRVFRRPLMFFT*PWVMESKSISIRDL
Trigger: GAGGTCCCTGATGGAAATCGACTTCGATTCCATCACCCAGGGTCAAGTGAAGAACATCAAAGGCCTCCTAAAGACTCTGAACACCACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp TTCAATATCAAGAGGAAGGTTCCCAAAGATGTCGGAAAACTTTTGTaGCAGGAGAATGATGTCTTCCCAGCCCTGGTCCGACAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: FNIKRKVPKDVGKLL*QENDVFPALVRQPG
Trigger: ACCTGGCTGTCGGACCAGGGCTGGGAAGACATCATTCTCCTGTCACAAAAGTTTTCCGACATCTTTGGGAACCTTCCTCTTGATATTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp TGGAGGGCCACGTTCCTCGCCAGTTCAGGGATGGTGAATCCCAGCTaGTCTAAGTACTTGGTTTCATTAATAATCTCTTTAAGAACGGGA +
Preference number: 5 (lower is better)
Translates to: WRATFLASSGMVNPS*SKYLVSLIISLRTG
Trigger: TCCCGTTCTTAAAGAGATTATTAATGAAACCAAGTACTTAGAGCAGCTGGGATTCACCATCCCTGAACTGGCGAGGAACGTGGCCCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp ATACCTTCCTGCAGATACTGGACATTCAGGTTGATCCAGAGGGTCTaGGACCATTCCTCTTTGGCAAGCTTCAGAGAGTTGTACAGTTCA +
Preference number: 5 (lower is better)
Translates to: IPSCRYWTFRLIQRV*DHSSLASFRELYSS
Trigger: TGAACTGTACAACTCTCTGAAGCTTGCCAAAGAGGAATGGTCCCAGACCCTCTGGATCAACCTGAATGTCCAGTATCTGCAGGAAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGACAAGATGGTTTCCGCTaGGAACAGAGGGACATTTCT +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGQDGFR*EQRDIS
Trigger: AGAAATGTCCCTCTGTTCCAAGCGGAAACCATCTTG...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATGCTTGTCCCCTTGCTaGACCTTGTTGAAGACATCT +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGCLSPC*TLLKTS
Trigger: AGATGTCTTCAACAAGGTCAAGCAAGGGGACAAGCA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp GAAATACAGTCTCCCATTCTTAGGAAGTGCCAGCTCCTCTGGCCTGCCGCACATTTTCTTCCAGTATGGTaGGTATTTCAGGTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: EIQSPILRKCQLLWPAAHFLPVW*VFQVLR
Trigger: CCTAAGAACCTGAAATACCAACCATACTGGAAGAAA...ATGTGCGGCAGGCCAGAGGAGCTGGCACTTCCTAAGAATGGGAGACTGTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGAAAAAGAACAGGGTGCTaGATTTTAACCATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGKRTGC*ILTICS
Trigger: GGAGCAGATGGTTAAAATCAAGCACCCTGTTCTTTT...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATCGACAGCGATGATCTaGTTCTGCTCTTCGATCTCT +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGSTAMI*FCSSIS
Trigger: AGAGATCGAAGAGCAGAACAAGATCATCGCTGTCGA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 90 bp GGTACGTGTTTAGGATTTCCATACAGACCTGGAAGTCAGACTCATTaGAGTCATAGTACACGTTCCAGCCGATCTTGCCAAACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: GTCLGFPYRPGSQTH*SHSTRSSRSCQTSS
Trigger: GGAGGAAGTTTGGCAAGATCGGCTGGAACGTGTACTATGACTTCAATGAGTCTGACTTCCAGGTCTGTATGGAAATCCTAAACACGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 90 bp ATTCTTCCAAGACCTGCAGAACATCTGAAAGGTCCTGGCAGATGTTaGCCATGTAGTCTGTTCTCTCAAACAATCGCTTCCGGTCAAACT +
Preference number: 5 (lower is better)
Translates to: ILPRPAEHLKGPGRC*PCSLFSQTIASGQT
Trigger: AGTTTGACCGGAAGCGATTGTTTGAGAGAACAGACTACATGGCCAACATCTGCCAGGACCTTTCAGATGTTCTGCAGGTCTTGGAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp AAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGGATCAGGATGTACAACTTaGTCATTATCCCAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: KENQHQTPFMTIPPSPEGSGCTT*SLSQAL
Trigger: CAAAGCTTGGGATAATGACAAAGTTGTACATCCTGA...TCCCTCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGTGGGAGGCAGATCTaGAACGATGTTTTTGTAAAG +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGGGRQI*NDVFVK
Trigger: CTTTACAAAAACATCGTTCAAGATCTGCCTCCCACC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAGGTTCTTCTCGTGCTTaGCCAATTCCTTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGGSSRA*PIPFQN
Trigger: GTTTTGAAAAGGAATTGGCAAAGCACGAGAAGAACC...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGAATCAGAACTTCAAGCTaGAAGTCCTCCATCACGTAT +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGIRTSS*KSSITY
Trigger: ATACGTGATGGAGGACTTCAAGCTTGAAGTTCTGAT...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141137.7
CDS CCA 90 bp ATCAGAACAATATTGGTCTCCTCGTTCAGGTTTTTGAGGAAGTTCTaGGTAGTGGCTGTCTTAGAAGTGCCGGATTCACCCACAAAAAGA +
Preference number: 5 (lower is better)
Translates to: IRTILVSSFRFLRKF*VVAVLEVPDSPTKR
Trigger: TCTTTTTGTGGGTGAATCCGGCACTTCTAAGACAGCCACTACCCAGAACTTCCTCAAAAACCTGAACGAGGAGACCAATATTGTTCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS-3UTR CAA 90 bp TTTCAAGGAAAATCAGCATCAAACACCTTTCATGACCATCCCACCCAGCCCGGATTTCTTCCAGTATGGTaGGTATTTCAGGTTCTTAGG +
Preference number: 5 (lower is better)
Translates to: FQGKSASNTFHDHPTQPGFLPVW*VFQVLR
Trigger: CCTAAGAACCTGAAATACCAACCATACTGGAAGAAA...TCCGGGCTGGGTGGGATGGTCATGAAAGGTGTTTGATGCTGATTTTCCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 90 bp CTGCACAAAGATCTTATTAACGATATCGATCTCCTTGTAGTACTGTaGCAGGATGTCATTAAACTTCATCATCATCTGACGGTTGATGGC +
Preference number: 5 (lower is better)
Translates to: LHKDLINDIDLLVVL*QDVIKLHHHLTVDG
Trigger: GCCATCAACCGTCAGATGATGATGAAGTTTAATGACATCCTGGCACAGTACTACAAGGAGATCGATATCGTTAATAAGATCTTTGTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058440.12
CDS TCA 72 bp GCGTGCCCCCGAAGCCACTCCGCTCAGCCAGCTTCATaGGGTCACTGGCGGGGTCAGAGCCAGGGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: ACPRSHSAQPAS*GHWRGQSQGSG
Trigger: TCCTGAGCCCTGGCTCTGACCCCGCCAGTGACCTCATGAAGCTGGCTGAGCGGAGTGGCTTCGGGGGCACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CAGCCTGCGGTGAAGGCCGCCAGCCTAGCCAACGACTaGTTCCCGGAGCCACCCACACCCACCAGCAATGCG +
Preference number: 6 (lower is better)
Translates to: QPAVKAASLAND*FPEPPTPTSNA
Trigger: CGCATTGCTGGTGGGTGTGGGTGGCTCCGGGAAGCAGTCGTTGGCTAGGCTGGCGGCCTTCACCGCAGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CAGCACGAAGAACAGAATGGCGCCCCGTCTCGCGGCTaGCCGGTAGCCGTCCCGCAGCCTGTCAATGTCCAG +
Preference number: 6 (lower is better)
Translates to: QHEEQNGAPSRG*PVAVPQPVNVQ
Trigger: CTGGACATTGACAGGCTGCGGGACGGCTACCGGCCAGCCGCGAGACGGGGCGCCATTCTGTTCTTCGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp GGTGGCGATTTCCTCCAGCAGGGCCTCGCAGGCGGCTaGCTTCTCGGCCAGGACGATCTTCTGCTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: GGDFLQQGLAGG*LLGQDDLLLCQ
Trigger: CTGGCAGAGCAGAAGATCGTCCTGGCCGAGAAGTCAGCCGCCTGCGAGGCCCTGCTGGAGGAAATCGCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp ATGTCCCGCAGCGCCCGCATCAGGACGACATCCTCCTaGAGGTCTGCGGAGCCTCTCTTCAGCTCACCAGCC +
Preference number: 6 (lower is better)
Translates to: MSRSARIRTTSS*RSAEPLFSSPA
Trigger: GGCTGGTGAGCTGAAGAGAGGCTCCGCAGACCTGCAGGAGGATGTCGTCCTGATGCGGGCGCTGCGGGACAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GGGCGCAGTGCGCCTGGAGCCGGATGCGCTCCCCGTTaGCCAAGGTCAACAGTTTGTTGTCGTCCATCACGG +
Preference number: 6 (lower is better)
Translates to: GRSAPGAGCAPR*PRSTVCCRPSR
Trigger: CCGTGATGGACGACAACAAACTGTTGACCTTGGCCAACGGGGAGCGCATCCGGCTCCAGGCGCACTGCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AGGTCTCCAACCTCAAAGAGCAGGGCGCAGTGCGCCTaGAGCCGGATGCGCTCCCCGTTGGCCAAGGTCAAC +
Preference number: 6 (lower is better)
Translates to: RSPTSKSRAQCA*SRMRSPLAKVN
Trigger: GTTGACCTTGGCCAACGGGGAGCGCATCCGGCTCCAGGCGCACTGCGCCCTGCTCTTTGAGGTTGGAGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp AGCCATTCCTCCGGCATGTGGCCTGTACCAGGGCCGTaGGGTAGGACTCAGGGATGTGCAGCCCAGAGAGCC +
Preference number: 6 (lower is better)
Translates to: SHSSGMWPVPGP*GRTQGCAAQRA
Trigger: GGCTCTCTGGGCTGCACATCCCTGAGTCCTACCTCACGGCCCTGGTACAGGCCACATGCCGGAGGAATGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GTGCTGGCCAAGGGCTCGAGCTGCAGCCGGATGCAGTaGTCATCCTTGATCAGTGGGTGGCGCATCACGTCG +
Preference number: 6 (lower is better)
Translates to: VLAKGSSCSRMQ*SSLISGWRITS
Trigger: CGACGTGATGCGCCACCCACTGATCAAGGATGAGCACTGCATCCGGCTGCAGCTCGAGCCCTTGGCCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CTCTTCTGGCACTTCTCCAGGCCCTCGCTGATGGTCTaGAGGTCGTGGAGGCGGTTTGGGGCCTCACAGCAG +
Preference number: 6 (lower is better)
Translates to: LFWHFSRPSLMV*RSWRRFGASQQ
Trigger: CTGCTGTGAGGCCCCAAACCGCCTCCACGACCTGCAGACCATCAGCGAGGGCCTGGAGAAGTGCCAGAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp AGGTCCACCACACCTGGCTGGCGGCCAGCACCACCATaGCTTGGTACAGCAGCATCCAGTCCACCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: RSTTPGWRPAPP*LGTAASSPPCF
Trigger: GAAGCAGGGTGGACTGGATGCTGCTGTACCAAGGCATGGTGGTGCTGGCCGCCAGCCAGGTGTGGTGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp TATTGCAGGTCTCCAACCTCAAAGAGCAGGGCGCAGTaGGCCTGGAGCCGGATGCGCTCCCCGTTGGCCAAG +
Preference number: 6 (lower is better)
Translates to: YCRSPTSKSRAQ*AWSRMRSPLAK
Trigger: CTTGGCCAACGGGGAGCGCATCCGGCTCCAGGCGCACTGCGCCCTGCTCTTTGAGGTTGGAGACCTGCAATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CCAGGGTCTGCACCAGCTCCACATTGTCCAGCATGTTaGCCGTGGACGTGGCCAGCTCGCGCAGGAGTGAGT +
Preference number: 6 (lower is better)
Translates to: PGSAPAPHCPAC*PWTWPARAGVS
Trigger: ACTCACTCCTGCGCGAGCTGGCCACGTCCACGGGCAACATGCTGGACAATGTGGAGCTGGTGCAGACCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GTGGGGTCTGTGGTGAGCCACAGGCGGAAGTCAGGGTaGGGCTTGGTGATCCTCTCCAGGGACTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VGSVVSHRRKSG*GLVILSRDFSR
Trigger: CCTGGAGAAGTCCCTGGAGAGGATCACCAAGCCGCACCCTGACTTCCGCCTGTGGCTCACCACAGACCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TACCCAGACCGGAAGACGCGGAGCAGCTCCTGGGAGTaGTCATCCAGGAGCGCTGTCTCTGCCTCGTTCAGC +
Preference number: 6 (lower is better)
Translates to: YPDRKTRSSSWE*SSRSAVSASFS
Trigger: GCTGAACGAGGCAGAGACAGCGCTCCTGGATGACCACTCCCAGGAGCTGCTCCGCGTCTTCCGGTCTGGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CCAGCTCCACATTGTCCAGCATGTTGCCCGTGGACGTaGCCAGCTCGCGCAGGAGTGAGTCCTCCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: PAPHCPACCPWT*PARAGVSPPGP
Trigger: AGGACCTGGAGGACTCACTCCTGCGCGAGCTGGCCACGTCCACGGGCAACATGCTGGACAATGTGGAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp AGGGCGCAGTGCGCCTGGAGCCGGATGCGCTCCCCGTaGGCCAAGGTCAACAGTTTGTTGTCGTCCATCACG +
Preference number: 6 (lower is better)
Translates to: RAQCAWSRMRSP*AKVNSLLSSIT
Trigger: CGTGATGGACGACAACAAACTGTTGACCTTGGCCAACGGGGAGCGCATCCGGCTCCAGGCGCACTGCGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TCCAGGGTCTGCACCAGCTCCACATTGTCCAGCATGTaGCCCGTGGACGTGGCCAGCTCGCGCAGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: SRVCTSSTLSSM*PVDVASSRRSE
Trigger: CTCACTCCTGCGCGAGCTGGCCACGTCCACGGGCAACATGCTGGACAATGTGGAGCTGGTGCAGACCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CCCGTGGACGTGGCCAGCTCGCGCAGGAGTGAGTCCTCCAGGTCCTaGAGCAGGTTCTTGTTCTCGCTGGTCTCTTGGATGAGGTGCTCC +
Preference number: 6 (lower is better)
Translates to: PVDVASSRRSESSRS*SRFLFSLVSWMRCS
Trigger: GGAGCACCTCATCCAAGAGACCAGCGAGAACAAGAACCTGCTCAAGGACCTGGAGGACTCACTCCTGCGCGAGCTGGCCACGTCCACGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TTGGTCTCTTCCAGGGTCTGCACCAGCTCCACATTGTCCAGCATGTaGCCCGTGGACGTGGCCAGCTCGCGCAGGAGTGAGTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: LVSSRVCTSSTLSSM*PVDVASSRRSESSR
Trigger: CCTGGAGGACTCACTCCTGCGCGAGCTGGCCACGTCCACGGGCAACATGCTGGACAATGTGGAGCTGGTGCAGACCCTGGAAGAGACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp GCCCCAGCTCCTGTAGCAGTACCACCGAGGTGGGTGTaGTGCTCAAGCCCAGGTGCTTCCGAACCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: APAPVAVPPRWV*CSSPGASEPGP
Trigger: TGGACCAGGTTCGGAAGCACCTGGGCTTGAGCATCACACCCACCTCGGTGGTACTGCTACAGGAGCTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp TTCCCCAGCGAGATCACCCAGGACTTGGCATTTTCTTaGACGGTGCTGGCCAAGGGCTCGAGCTGCAGCCGG +
Preference number: 6 (lower is better)
Translates to: FPSEITQDLAFS*TVLAKGSSCSR
Trigger: CCGGCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCTCGCTGGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp ACTTCCAAATGGAAGGCCACGGACAAGCCGCGCACCTaGCGTGGCAGCTTGCGGAGGTTCTTGAGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: TSKWKATDKPRT*RGSLRRFLRKP
Trigger: GGGCTTCCTCAAGAACCTCCGCAAGCTGCCACGGCAGGTGCGCGGCTTGTCCGTGGCCTTCCATTTGGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CCTCAAAGAGCAGGGCGCAGTGCGCCTGGAGCCGGATaGGCTCCCCGTTGGCCAAGGTCAACAGTTTGTTGT +
Preference number: 6 (lower is better)
Translates to: PQRAGRSAPGAG*APRWPRSTVCC
Trigger: ACAACAAACTGTTGACCTTGGCCAACGGGGAGCGCATCCGGCTCCAGGCGCACTGCGCCCTGCTCTTTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GCCTCGGCTCAGCAGGATCTCAAACACCTCACAGCCTaGGGTGAAGGCCGCCAGCCTAGCCAACGACTGCTT +
Preference number: 6 (lower is better)
Translates to: ASAQQDLKHLTA*GEGRQPSQRLL
Trigger: AAGCAGTCGTTGGCTAGGCTGGCGGCCTTCACCGCAGGCTGTGAGGTGTTTGAGATCCTGCTGAGCCGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GAAGGTCCCAGTGCACTGGCGGATGTTGAGCTCATCTaGCTCGCGGTCCCAGTAGAAGCGGAGCTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: EGPSALADVELI*LAVPVEAELAL
Trigger: GAGAGCCAGCTCCGCTTCTACTGGGACCGCGAGCCAGATGAGCTCAACATCCGCCAGTGCACTGGGACCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CCAGTTGAGGGCCTGCTGCTGGGGGTCGATGCAGAGTaGGAAGCGACTGGCCCGGGTTGTAAGGATGCCATT +
Preference number: 6 (lower is better)
Translates to: PVEGLLLGVDAE*EATGPGCKDAI
Trigger: AATGGCATCCTTACAACCCGGGCCAGTCGCTTCCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TCTGCACCAGCTCCACATTGTCCAGCATGTTGCCCGTaGACGTGGCCAGCTCGCGCAGGAGTGAGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: SAPAPHCPACCP*TWPARAGVSPP
Trigger: TGGAGGACTCACTCCTGCGCGAGCTGGCCACGTCCACGGGCAACATGCTGGACAATGTGGAGCTGGTGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CTTCCCCAGCGAGATCACCCAGGACTTGGCATTTTCTaGCACGGTGCTGGCCAAGGGCTCGAGCTGCAGCCG +
Preference number: 6 (lower is better)
Translates to: LPQRDHPGLGIF*HGAGQGLELQP
Trigger: CGGCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCTCGCTGGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GCTCGGCCTCCGTACATGACCTCTCCAATAAGGTACTaGAGGCTGCCCCAGGGGATGCGAGGGTCACGCTGC +
Preference number: 6 (lower is better)
Translates to: ARPPYMTSPIRY*RLPQGMRGSRC
Trigger: GCAGCGTGACCCTCGCATCCCCTGGGGCAGCCTCAAGTACCTTATTGGAGAGGTCATGTACGGAGGCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GTTGAGGAGCTTCCCCAGCGAGATCACCCAGGACTTGGCATTTTCTaGCACGGTGCTGGCCAAGGGCTCGAGCTGCAGCCGGATGCAGTG +
Preference number: 6 (lower is better)
Translates to: VEELPQRDHPGLGIF*HGAGQGLELQPDAV
Trigger: CACTGCATCCGGCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCTCGCTGGGGAAGCTCCTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp ACCGCGGTCATCCAGTCTTCCACACGGCCATCGGCCCGGATGATCTaGCGGAAGGTCATGACTTCTCCCTCTGCCGAGATCATGGCCGAC +
Preference number: 6 (lower is better)
Translates to: TAVIQSSTRPSARMI*RKVMTSPSAEIMAD
Trigger: GTCGGCCATGATCTCGGCAGAGGGAGAAGTCATGACCTTCCGCAAGATCATCCGGGCCGATGGCCGTGTGGAAGACTGGATGACCGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GCCAGCTCGCGCAGGAGTGAGTCCTCCAGGTCCTTGAGCAGGTTCTaGTTCTCGCTGGTCTCTTGGATGAGGTGCTCCCTCTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: ASSRRSESSRSLSRF*FSLVSWMRCSLCSS
Trigger: GGAGGAGCAGAGGGAGCACCTCATCCAAGAGACCAGCGAGAACAAGAACCTGCTCAAGGACCTGGAGGACTCACTCCTGCGCGAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GTGGCTTTGGACTTGGTCTCTTCCAGGGTCTGCACCAGCTCCACATaGTCCAGCATGTTGCCCGTGGACGTGGCCAGCTCGCGCAGGAGT +
Preference number: 6 (lower is better)
Translates to: VALDLVSSRVCTSST*SSMLPVDVASSRRS
Trigger: ACTCCTGCGCGAGCTGGCCACGTCCACGGGCAACATGCTGGACAATGTGGAGCTGGTGCAGACCCTGGAAGAGACCAAGTCCAAAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp AGGGCTCGAGCTGCAGCCGGATGCAGTGCTCATCCTTaGTCAGTGGGTGGCGCATCACGTCGGTGGCAATCT +
Preference number: 6 (lower is better)
Translates to: RARAAAGCSAHP*SVGGASRRWQS
Trigger: AGATTGCCACCGACGTGATGCGCCACCCACTGATCAAGGATGAGCACTGCATCCGGCTGCAGCTCGAGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp ACTCAAACTCCCGGGCCTCAAGGATGCTGCCCCGGATaGAGGAATCCACGATGTCCCGGGCGTGGACATCGA +
Preference number: 6 (lower is better)
Translates to: TQTPGPQGCCPG*RNPRCPGRGHR
Trigger: TCGATGTCCACGCCCGGGACATCGTGGATTCCTTCATCCGGGGCAGCATCCTTGAGGCCCGGGAGTTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp ATCTTCCTCCCCACCTCCAGGTATCTCTGCTTCACCTaGTGGCCCCTCTCGCTGTCCAGGAGTTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: IFLPTSRYLCFT*WPLSLSRSSST
Trigger: GGTGGAGGAACTCCTGGACAGCGAGAGGGGCCAGCAGGTGAAGCAGAGATACCTGGAGGTGGGGAGGAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GCGAGATCACCCAGGACTTGGCATTTTCTTGCACGGTaGTGGCCAAGGGCTCGAGCTGCAGCCGGATGCAGT +
Preference number: 6 (lower is better)
Translates to: ARSPRTWHFLAR*WPRARAAAGCS
Trigger: ACTGCATCCGGCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CAGAGCAAGCAGTCGCCTAGCAGCTTCACCCGCCGGTaGATTAGCTCATCCAGGTCGTTCAGCCACCTGACG +
Preference number: 6 (lower is better)
Translates to: QSKQSPSSFTRR*ISSSRSFSHLT
Trigger: CGTCAGGTGGCTGAACGACCTGGATGAGCTAATGCACCGGCGGGTGAAGCTGCTAGGCGACTGCTTGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AGACATCTTCCACTTCCCAGGTCCACCACACCTGGCTaGCGGCCAGCACCACCATGCCTTGGTACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: RHLPLPRSTTPG*RPAPPCLGTAA
Trigger: TGCTGCTGTACCAAGGCATGGTGGTGCTGGCCGCCAGCCAGGTGTGGTGGACCTGGGAAGTGGAAGATGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GGCGGCCTCGTAGTCCTGGATGTCTTCATAAATGCGTaGCTCCCCCTCTTGCAGAGCCAACCGGAAGTCCCC +
Preference number: 6 (lower is better)
Translates to: GGLVVLDVFINA*LPLLQSQPEVP
Trigger: GGGGACTTCCGGTTGGCTCTGCAAGAGGGGGAGCCACGCATTTATGAAGACATCCAGGACTACGAGGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GCTCTGCCAGCTTCAGGTTCAGCTCGTCCAGCTGGATaGTCGCCTCCTTCAGCTTGTCCAGCCCTCCTTCCA +
Preference number: 6 (lower is better)
Translates to: ALPASGSARPAG*SPPSACPALLP
Trigger: TGGAAGGAGGGCTGGACAAGCTGAAGGAGGCGACCATCCAGCTGGACGAGCTGAACCTGAAGCTGGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TCCTCTTTTCGTTTGATCCAGTTGAGGGCCTGCTGCTaGGGGTCGATGCAGAGTGGGAAGCGACTGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SSFRLIQLRACC*GSMQSGKRLAR
Trigger: CCGGGCCAGTCGCTTCCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAAAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TTCAGCTCGTCCAGCTGGATGGTCGCCTCCTTCAGCTaGTCCAGCCCTCCTTCCAGACGCTTGCACTGGGCT +
Preference number: 6 (lower is better)
Translates to: FSSSSWMVASFS*SSPPSRRLHWA
Trigger: AGCCCAGTGCAAGCGTCTGGAAGGAGGGCTGGACAAGCTGAAGGAGGCGACCATCCAGCTGGACGAGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GACTTGGTCTCTTCCAGGGTCTGCACCAGCTCCACATaGTCCAGCATGTTGCCCGTGGACGTGGCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: DLVSSRVCTSST*SSMLPVDVASS
Trigger: CGAGCTGGCCACGTCCACGGGCAACATGCTGGACAATGTGGAGCTGGTGCAGACCCTGGAAGAGACCAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TTTGGGGCCCTGCCCGTGTTGGTGTGTACCACTAGACCTTCCACCTaGGTCAGCAGAGGCCCGATAGCCATGTACCACCGGACCATGTGG +
Preference number: 6 (lower is better)
Translates to: FGALPVLVCTTRPST*VSRGPIAMYHRTMW
Trigger: CCACATGGTCCGGTGGTACATGGCTATCGGGCCTCTGCTGACCAAGGTGGAAGGTCTAGTGGTACACACCAACACGGGCAGGGCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CTAGCCGATTCGTTGAGGAGCTTCCCCAGCGAGATCACCCAGGACTaGGCATTTTCTTGCACGGTGCTGGCCAAGGGCTCGAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: LADSLRSFPSEITQD*AFSCTVLAKGSSCS
Trigger: GCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCTCGCTGGGGAAGCTCCTCAACGAATCGGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GTGACCACCTTTAAGGACTTCTGCAGGATTCCAATGGGGAAGCCCTaGGTGGGGTCTGTGGTGAGCCACAGGCGGAAGTCAGGGTGCGGC +
Preference number: 6 (lower is better)
Translates to: VTTFKDFCRIPMGKP*VGSVVSHRRKSGCG
Trigger: GCCGCACCCTGACTTCCGCCTGTGGCTCACCACAGACCCCACCAAGGGCTTCCCCATTGGAATCCTGCAGAAGTCCTTAAAGGTGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GCCCTCTGGAGCTCAGCCAGAGACCTGGTCATGCGAATGACAAGCTaGTTGAAGCGCCCCAGCTCCTGTAGCAGTACCACCGAGGTGGGT +
Preference number: 6 (lower is better)
Translates to: ALWSSARDLVMRMTS*LKRPSSCSSTTEVG
Trigger: ACCCACCTCGGTGGTACTGCTACAGGAGCTGGGGCGCTTCAACAAGCTTGTCATTCGCATGACCAGGTCTCTGGCTGAGCTCCAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp AACCATTTTCCTCCAACACCTGCTCCACTGCGTCGTTaGAATCCGGGTAGCGCACACGGGGGCAGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: NHFPPTPAPLRR*NPGSAHGGSPA
Trigger: GGCTGGACTGCCCCCGTGTGCGCTACCCGGATTTCAACGACGCAGTGGAGCAGGTGTTGGAGGAAAATGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CTCCGATGGGAAAGGGACATTGAAGACGCTGAACAGTaGGAGGAATCTGGGGTCCACCTCGTTGCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: LRWERDIEDAEQ*EESGVHLVAAP
Trigger: GGGGGCCGCAACGAGGTGGACCCCAGATTCCTCTCACTGTTCAGCGTCTTCAATGTCCCTTTCCCATCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GCATTTTCTTGCACGGTGCTGGCCAAGGGCTCGAGCTaGAGCCGGATGCAGTGCTCATCCTTGATCAGTGGG +
Preference number: 6 (lower is better)
Translates to: AFSCTVLAKGSS*SRMQCSSLISG
Trigger: CCCACTGATCAAGGATGAGCACTGCATCCGGCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGAAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CCGGATGATCTTGCGGAAGGTCATGACTTCTCCCTCTaGCGAGATCATGGCCGACACGAGCTTCTCCCCGCT +
Preference number: 6 (lower is better)
Translates to: PDDLAEGHDFSL*RDHGRHELLPA
Trigger: AGCGGGGAGAAGCTCGTGTCGGCCATGATCTCGGCAGAGGGAGAAGTCATGACCTTCCGCAAGATCATCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp ATCCCACATCGAGACACAGTAGCCGGGGAGGCGTATTaGAGGTCTCCAACCTCAAAGAGCAGGGCGCAGTGC +
Preference number: 6 (lower is better)
Translates to: IPHRDTVAGEAY*RSPTSKSRAQC
Trigger: GCACTGCGCCCTGCTCTTTGAGGTTGGAGACCTGCAATACGCCTCCCCGGCTACTGTGTCTCGATGTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AGATCACCCAGGACTTGGCATTTTCTTGCACGGTGCTaGCCAAGGGCTCGAGCTGCAGCCGGATGCAGTGCT +
Preference number: 6 (lower is better)
Translates to: RSPRTWHFLARC*PRARAAAGCSA
Trigger: AGCACTGCATCCGGCTGCAGCTCGAGCCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp ATCGAAATGAAAGTCGTACAGGGAGGGAAGATGCCCTaGCAGTTCCCCGGGACGGGCCCAGTTCCCTTCCGA +
Preference number: 6 (lower is better)
Translates to: IEMKVVQGGKMP*QFPGTGPVPFR
Trigger: TCGGAAGGGAACTGGGCCCGTCCCGGGGAACTGCCAGGGCATCTTCCCTCCCTGTACGACTTTCATTTCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TTCTGCTCTGCCAGCTTCAGGTTCAGCTCGTCCAGCTaGATGGTCGCCTCCTTCAGCTTGTCCAGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: FCSASFRFSSSS*MVASFSLSSPP
Trigger: AGGAGGGCTGGACAAGCTGAAGGAGGCGACCATCCAGCTGGACGAGCTGAACCTGAAGCTGGCAGAGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp AAGCTGTCTACCCGGCCAAGGACATCGTCGATTCTCTaGGGGTCCCCTGTCACAGCCTTGAGCTCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: KLSTRPRTSSIL*GSPVTALSSGP
Trigger: TGGCCCAGAGCTCAAGGCTGTGACAGGGGACCCCAAGAGAATCGACGATGTCCTTGGCCGGGTAGACAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CTGCCCGTGTTGGTGTGTACCACTAGACCTTCCACCTaGGTCAGCAGAGGCCCGATAGCCATGTACCACCGG +
Preference number: 6 (lower is better)
Translates to: LPVLVCTTRPST*VSRGPIAMYHR
Trigger: CCGGTGGTACATGGCTATCGGGCCTCTGCTGACCAAGGTGGAAGGTCTAGTGGTACACACCAACACGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TCGTTGAGGAGCTTCCCCAGCGAGATCACCCAGGACTaGGCATTTTCTTGCACGGTGCTGGCCAAGGGCTCG +
Preference number: 6 (lower is better)
Translates to: SLRSFPSEITQD*AFSCTVLAKGS
Trigger: CGAGCCCTTGGCCAGCACCGTGCAAGAAAATGCCAAGTCCTGGGTGATCTCGCTGGGGAAGCTCCTCAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp AGGATTTCCTTCACGGCCTTCTCGATGGCGACCTCCTaGACGGCCGCAGTGACGATCTCGTTGAGCACCTCC +
Preference number: 6 (lower is better)
Translates to: RISFTAFSMATS*TAAVTISLSTS
Trigger: GGAGGTGCTCAACGAGATCGTCACTGCGGCCGTCAAGGAGGTCGCCATCGAGAAGGCCGTGAAGGAAATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CATCCCACATCGAGACACAGTAGCCGGGGAGGCGTATaGCAGGTCTCCAACCTCAAAGAGCAGGGCGCAGTG +
Preference number: 6 (lower is better)
Translates to: HPTSRHSSRGGV*QVSNLKEQGAV
Trigger: CACTGCGCCCTGCTCTTTGAGGTTGGAGACCTGCAATACGCCTCCCCGGCTACTGTGTCTCGATGTGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GTGGCCAGCTCGCGCAGGAGTGAGTCCTCCAGGTCCTaGAGCAGGTTCTTGTTCTCGCTGGTCTCTTGGATG +
Preference number: 6 (lower is better)
Translates to: VASSRRSESSRS*SRFLFSLVSWM
Trigger: CATCCAAGAGACCAGCGAGAACAAGAACCTGCTCAAGGACCTGGAGGACTCACTCCTGCGCGAGCTGGCCAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CAGGTGTCTAGGATTTCCTTCACGGCCTTCTCGATGGCGACCTCCTaGACGGCCGCAGTGACGATCTCGTTGAGCACCTCCGTGTGCTTG +
Preference number: 6 (lower is better)
Translates to: QVSRISFTAFSMATS*TAAVTISLSTSVCL
Trigger: CAAGCACACGGAGGTGCTCAACGAGATCGTCACTGCGGCCGTCAAGGAGGTCGCCATCGAGAAGGCCGTGAAGGAAATCCTAGACACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CTGTCAATAGCTCGGCCTCCGTACATGACCTCTCCAATAAGGTACTaGAGGCTGCCCCAGGGGATGCGAGGGTCACGCTGCTGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: LSIARPPYMTSPIRY*RLPQGMRGSRCWKA
Trigger: AGCCTTCCAGCAGCGTGACCCTCGCATCCCCTGGGGCAGCCTCAAGTACCTTATTGGAGAGGTCATGTACGGAGGCCGAGCTATTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CTCTGGAGCTCAGCCAGAGACCTGGTCATGCGAATGACAAGCTTGTaGAAGCGCCCCAGCTCCTGTAGCAGTACCACCGAGGTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: LWSSARDLVMRMTSL*KRPSSCSSTTEVGV
Trigger: CACACCCACCTCGGTGGTACTGCTACAGGAGCTGGGGCGCTTCAACAAGCTTGTCATTCGCATGACCAGGTCTCTGGCTGAGCTCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TCATCACGGCTCAGCATCTCCTCGAATAGCATAGGGTTGGTGAGGTaGAAGGCAGTGTATACGCGGTCGCGCATCCACAGGACCCGCAGG +
Preference number: 6 (lower is better)
Translates to: SSRLSISSNSIGLVR*KAVYTRSRIHRTRR
Trigger: CCTGCGGGTCCTGTGGATGCGCGACCGCGTATACACTGCCTTCAACCTCACCAACCCTATGCTATTCGAGGAGATGCTGAGCCGTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GGAGCCACCAAGCTGTCTACCCGGCCAAGGACATCGTCGATTCTCTaGGGGTCCCCTGTCACAGCCTTGAGCTCTGGGCCAAATATGTTG +
Preference number: 6 (lower is better)
Translates to: GATKLSTRPRTSSIL*GSPVTALSSGPNML
Trigger: CAACATATTTGGCCCAGAGCTCAAGGCTGTGACAGGGGACCCCAAGAGAATCGACGATGTCCTTGGCCGGGTAGACAGCTTGGTGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GAGTTCCGAGCCTTTATCAAGGTCTTCGCCCACGGCCCCAGGGCCTaGGCTGTAGAAACGTCTGGCGAATTCATCCAGCTGGCTCCTGTA +
Preference number: 6 (lower is better)
Translates to: EFRAFIKVFAHGPRA*AVETSGEFIQLAPV
Trigger: TACAGGAGCCAGCTGGATGAATTCGCCAGACGTTTCTACAGCCAAGGCCCTGGGGCCGTGGGCGAAGACCTTGATAAAGGCTCGGAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GGCCCCACGAATCTGCTCCCGGAGATGCTCTGCAAGTTGACTGTGTaGTCGTCCAAGCACTGGATGATGTCGTCCACGGACCCCAAGATG +
Preference number: 6 (lower is better)
Translates to: GPTNLLPEMLCKLTV*SSKHWMMSSTDPKM
Trigger: CATCTTGGGGTCCGTGGACGACATCATCCAGTGCTTGGACGACAACACAGTCAACTTGCAGAGCATCTCCGGGAGCAGATTCGTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GGCCTCGTAGTCCTGGATGTCTTCATAAATGCGTGGCTCCCCCTCTaGCAGAGCCAACCGGAAGTCCCCGAACAGGATGGGATCCCTCAT +
Preference number: 6 (lower is better)
Translates to: GLVVLDVFINAWLPL*QSQPEVPEQDGIPH
Trigger: ATGAGGGATCCCATCCTGTTCGGGGACTTCCGGTTGGCTCTGCAAGAGGGGGAGCCACGCATTTATGAAGACATCCAGGACTACGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp AGCTTCAGGTTCAGCTCGTCCAGCTGGATGGTCGCCTCCTTCAGCTaGTCCAGCCCTCCTTCCAGACGCTTGCACTGGGCTATGTTGTAC +
Preference number: 6 (lower is better)
Translates to: SFRFSSSSWMVASFS*SSPPSRRLHWAMLY
Trigger: GTACAACATAGCCCAGTGCAAGCGTCTGGAAGGAGGGCTGGACAAGCTGAAGGAGGCGACCATCCAGCTGGACGAGCTGAACCTGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TGCTTCGGGGGCTTCGCGAATGACCTGATTTCAGTCACGTCGGACTaGTCCAGCTTCTGCAGCTCTAGTTTGGCAGCCTCCAGGATGGGC +
Preference number: 6 (lower is better)
Translates to: CFGGFANDLISVTSD*SSFCSSSLAASRMG
Trigger: GCCCATCCTGGAGGCTGCCAAACTAGAGCTGCAGAAGCTGGACAAGTCCGACGTGACTGAAATCAGGTCATTCGCGAAGCCCCCGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TCGTTCAGCCACCTGACGTTTTCTGAGCCCAGCCCAGAGATGAGCTaGTCCGCTGCGATCAACCGCCTCTCCATAATCTCTGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SFSHLTFSEPSPEMS*SAAINRLSIISASS
Trigger: GGAGGAGGCAGAGATTATGGAGAGGCGGTTGATCGCAGCGGACAAGCTCATCTCTGGGCTGGGCTCAGAAAACGTCAGGTGGCTGAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp AGCCACTGCGGTCTCCAACAGCTGCAGAGCCACCTTTTCTTGGCCTaGACCCATTGCAAGAAACTTGAGACGCGTGCCCCCGAAGCCACT +
Preference number: 6 (lower is better)
Translates to: SHCGLQQLQSHLFLA*THCKKLETRAPEAT
Trigger: AGTGGCTTCGGGGGCACGCGTCTCAAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGTGGCTCTGCAGCTGTTGGAGACCGCAGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CCCCGCACGCTCGTTTACTTCATCGGCATCCTGGAACTTGGTCACTaGTGTAAACAAGGTGGACCGGTCCAACGGCCAGCCATTCCTCCG +
Preference number: 6 (lower is better)
Translates to: PRTLVYFIGILELGH*CKQGGPVQRPAIPP
Trigger: CGGAGGAATGGCTGGCCGTTGGACCGGTCCACCTTGTTTACACAAGTGACCAAGTTCCAGGATGCCGATGAAGTAAACGAGCGTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CACCCTTGCCCCGCACGCTCGTTTACTTCATCGGCATCCTGGAACTaGGTCACTTGTGTAAACAAGGTGGACCGGTCCAACGGCCAGCCA +
Preference number: 6 (lower is better)
Translates to: HPCPARSFTSSASWN*VTCVNKVDRSNGQP
Trigger: TGGCTGGCCGTTGGACCGGTCCACCTTGTTTACACAAGTGACCAAGTTCCAGGATGCCGATGAAGTAAACGAGCGTGCGGGGCAAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp ACAGCGCAGAGGCGTTGTCCTCGTCACTCAAGTGGTTaGGGAAGTGCAAGATGCAGTCCTCCGCCTCGCTGT +
Preference number: 6 (lower is better)
Translates to: TAQRRCPRHSSG*GSARCSPPPRC
Trigger: ACAGCGAGGCGGAGGACTGCATCTTGCACTTCCTCAACCACTTGAGTGACGAGGACAACGCCTCTGCGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp GTTCCAGGAAGCCCTCCTCGGCCACGTGCGCGTCTGTaGACAGGAAGATCATCATCTTGTTCTCCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: VPGSPPRPRARL*TGRSSSCSPGP
Trigger: TGGGCCTGGAGAACAAGATGATGATCTTCCTGTTCACAGACGCGCACGTGGCCGAGGAGGGCTTCCTGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CCACCTTTTCTTGGCCTTGACCCATTGCAAGAAACTTaGGACGCGTGCCCCCGAAGCCACTCCGCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: PPFLGLDPLQET*DACPRSHSAQP
Trigger: TGGCTGAGCGGAGTGGCTTCGGGGGCACGCGTCTCAAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CAGCGTGGAAGAAGGCCAACACGTAGACCAGGGGCTTaGAGGCGGTATGCGGACACTGCTCCAGCATGTCAT +
Preference number: 6 (lower is better)
Translates to: QRGRRPTRRPGA*RRYADTAPACH
Trigger: ATGACATGCTGGAGCAGTGTCCGCATACCGCCTTCAAGCCCCTGGTCTACGTGTTGGCCTTCTTCCACGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GAGGCGTTGTCCTCGTCACTCAAGTGGTTGAGGAAGTaGAAGATGCAGTCCTCCGCCTCGCTGTCATCACGG +
Preference number: 6 (lower is better)
Translates to: EALSSSLKWLRK*KMQSSASLSSR
Trigger: CCGTGATGACAGCGAGGCGGAGGACTGCATCTTGCACTTCCTCAACCACTTGAGTGACGAGGACAACGCCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CCTTGGCGGCCTCGTAGTCCTGGATGTCTTCATAAATaGGTGGCTCCCCCTCTTGCAGAGCCAACCGGAAGT +
Preference number: 6 (lower is better)
Translates to: PWRPRSPGCLHK*VAPPLAEPTGS
Trigger: ACTTCCGGTTGGCTCTGCAAGAGGGGGAGCCACGCATTTATGAAGACATCCAGGACTACGAGGCCGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CATGACGGCCTCCACGAACTTCAGCATGCCCAGCCCTaGCTTGCTCACAGCCTCCATCTCTTCGATTGTGGT +
Preference number: 6 (lower is better)
Translates to: HDGLHELQHAQP*LAHSLHLFDCG
Trigger: ACCACAATCGAAGAGATGGAGGCTGTGAGCAAGGCAGGGCTGGGCATGCTGAAGTTCGTGGAGGCCGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TCCACACCATGCGCAGAGCGCTCATCATGGAGGGAATaGTGTCCAGGACCACGTGAAAGCTGGAGCCATGTG +
Preference number: 6 (lower is better)
Translates to: STPCAERSSWRE*CPGPRESWSHV
Trigger: CACATGGCTCCAGCTTTCACGTGGTCCTGGACACCATTCCCTCCATGATGAGCGCTCTGCGCATGGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GAGCTGCAGCCGGATGCAGTGCTCATCCTTGATCAGTaGGTGGCGCATCACGTCGGTGGCAATCTTGGAGTA +
Preference number: 6 (lower is better)
Translates to: ELQPDAVLILDQ*VAHHVGGNLGV
Trigger: TACTCCAAGATTGCCACCGACGTGATGCGCCACCCACTGATCAAGGATGAGCACTGCATCCGGCTGCAGCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TGCTGGAACTGCTTGCTGAACTCGCCCACCGACTGGTaGACCATGACCACGTGCTCCACAAGCTCCTCAAGT +
Preference number: 6 (lower is better)
Translates to: CWNCLLNSPTDW*TMTTCSTSSSS
Trigger: ACTTGAGGAGCTTGTGGAGCACGTGGTCATGGTCCACCAGTCGGTGGGCGAGTTCAGCAAGCAGTTCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CCTTCTCCTCTGCCAGCTTCTTCTTCTCCTCCGCTATaGCTGTGTTGGTGGCGATTTCCTCCAGCAGGGCCT +
Preference number: 6 (lower is better)
Translates to: PSPLPASSSPPL*LCWWRFPPAGP
Trigger: AGGCCCTGCTGGAGGAAATCGCCACCAACACAGCCATAGCGGAGGAGAAGAAGAAGCTGGCAGAGGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GACTTCTCCAGGTCCTTCAGCCACTTGACCAGGAGGTaGCAGTTCTGCAACATCAGCCACTGTCCACGAGCC +
Preference number: 6 (lower is better)
Translates to: DFSRSFSHLTRR*QFCNISHCPRA
Trigger: GGCTCGTGGACAGTGGCTGATGTTGCAGAACTGCCACCTCCTGGTCAAGTGGCTGAAGGACCTGGAGAAGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp AACAGCGCAGAGGCGTTGTCCTCGTCACTCAAGTGGTaGAGGAAGTGCAAGATGCAGTCCTCCGCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: NSAEALSSSLKW*RKCKMQSSASL
Trigger: CAGCGAGGCGGAGGACTGCATCTTGCACTTCCTCAACCACTTGAGTGACGAGGACAACGCCTCTGCGCTGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ATCCAGTCTTCCACACGGCCATCGGCCCGGATGATCTaGCGGAAGGTCATGACTTCTCCCTCTGCCGAGATC +
Preference number: 6 (lower is better)
Translates to: IQSSTRPSARMI*RKVMTSPSAEI
Trigger: GATCTCGGCAGAGGGAGAAGTCATGACCTTCCGCAAGATCATCCGGGCCGATGGCCGTGTGGAAGACTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GTCCTGGATGTCTTCATAAATGCGTGGCTCCCCCTCTaGCAGAGCCAACCGGAAGTCCCCGAACAGGATGGG +
Preference number: 6 (lower is better)
Translates to: VLDVFINAWLPL*QSQPEVPEQDG
Trigger: CCCATCCTGTTCGGGGACTTCCGGTTGGCTCTGCAAGAGGGGGAGCCACGCATTTATGAAGACATCCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GTCACGTCGGACTTGTCCAGCTTCTGCAGCTCTAGTTaGGCAGCCTCCAGGATGGGCATGACCTCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: VTSDLSSFCSSS*AASRMGMTSAR
Trigger: TCTGGCTGAGGTCATGCCCATCCTGGAGGCTGCCAAACTAGAGCTGCAGAAGCTGGACAAGTCCGACGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GCTGCCAGCTCGTTCTGGATCCTCTCTAGCTCCCGTTaGGTTAGGAAGAAATTCCGCTCCAGCCTGGCCACC +
Preference number: 6 (lower is better)
Translates to: AASSFWILSSSR*VRKKFRSSLAT
Trigger: GGTGGCCAGGCTGGAGCGGAATTTCTTCCTAACCAAACGGGAGCTAGAGAGGATCCAGAACGAGCTGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CGCAGGAGTGAGTCCTCCAGGTCCTTGAGCAGGTTCTaGTTCTCGCTGGTCTCTTGGATGAGGTGCTCCCTC +
Preference number: 6 (lower is better)
Translates to: RRSESSRSLSRF*FSLVSWMRCSL
Trigger: GAGGGAGCACCTCATCCAAGAGACCAGCGAGAACAAGAACCTGCTCAAGGACCTGGAGGACTCACTCCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp ACAGTGGACAGGAAGCGCACATTGTCGGAGGCCTCCATGTGGAGCTaGAAGAGTTCCGTCAGGATAGGCTGCACATTGGCCGTGAGCATG +
Preference number: 6 (lower is better)
Translates to: TVDRKRTLSEASMWS*KSSVRIGCTLAVSM
Trigger: CATGCTCACGGCCAATGTGCAGCCTATCCTGACGGAACTCTTCAAGCTCCACATGGAGGCCTCCGACAATGTGCGCTTCCTGTCCACTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TTGAACTGCGCGTTTGCTCGGTTTTCCTTGAACAGGGTGCGTAGGTaGATGACTCGGCACACGCGCTCAGCAATCTCCCAGGCGATGCGT +
Preference number: 6 (lower is better)
Translates to: LNCAFARFSLNRVRR*MTRHTRSAISQAMR
Trigger: ACGCATCGCCTGGGAGATTGCTGAGCGCGTGTGCCGAGTCATCAACCTACGCACCCTGTTCAAGGAAAACCGAGCAAACGCGCAGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TGCAGGAAAGGCCCCACGAATCTGCTCCCGGAGATGCTCTGCAAGTaGACTGTGTTGTCGTCCAAGCACTGGATGATGTCGTCCACGGAC +
Preference number: 6 (lower is better)
Translates to: CRKGPTNLLPEMLCK*TVLSSKHWMMSSTD
Trigger: GTCCGTGGACGACATCATCCAGTGCTTGGACGACAACACAGTCAACTTGCAGAGCATCTCCGGGAGCAGATTCGTGGGGCCTTTCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GGGATGTGCCCAAGGAAGAGAGACCTGGCTACATCATCTAACTCATaGCTCATTCCGACTTCCCCAGCCAAGGCCCTCTGGAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: GMCPRKRDLATSSNS*LIPTSPAKALWSSA
Trigger: GGCTGAGCTCCAGAGGGCCTTGGCTGGGGAAGTCGGAATGAGCAATGAGTTAGATGATGTAGCCAGGTCTCTCTTCCTTGGGCACATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp TCCAGCTTCCAGAGGGGCCGGTATCGCTTCCACCTCTaGAGGTACTTCATGATGTTCACCAGCAGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: SSFQRGRYRFHL*RYFMMFTSSLW
Trigger: CCACAGGCTGCTGGTGAACATCATGAAGTACCTTCAGAGGTGGAAGCGATACCGGCCCCTCTGGAAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp TCGCCTAAAAACGACTTGGCCACTGCATGCAAGGCCTaGGGTGGCCAGGGCATGAACCAATCAATGCCGGTG +
Preference number: 6 (lower is better)
Translates to: SPKNDLATACKA*GGQGMNQSMPV
Trigger: CACCGGCATTGATTGGTTCATGCCCTGGCCACCTCAGGCCTTGCATGCAGTGGCCAAGTCGTTTTTAGGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp GTCTCCAACAGCTGCAGAGCCACCTTTTCTTGGCCTTaGCCCATTGCAAGAAACTTGAGACGCGTGCCCCCG +
Preference number: 6 (lower is better)
Translates to: VSNSCRATFSWP*PIARNLRRVPP
Trigger: CGGGGGCACGCGTCTCAAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGTGGCTCTGCAGCTGTTGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CATTCAATGCAGCTGCCGTTCATCCAGCGCACGAAATaGTTGGTGACCTCCACACAGCTGCGGACACAGTGG +
Preference number: 6 (lower is better)
Translates to: HSMQLPFIQRTK*LVTSTQLRTQW
Trigger: CCACTGTGTCCGCAGCTGTGTGGAGGTCACCAAGCATTTCGTGCGCTGGATGAACGGCAGCTGCATTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GAGCACATAACCATTTTCCTCCAACACCTGCTCCACTaGGTCGTTGAAATCCGGGTAGCGCACACGGGGGCA +
Preference number: 6 (lower is better)
Translates to: EHITIFLQHLLH*VVEIRVAHTGA
Trigger: TGCCCCCGTGTGCGCTACCCGGATTTCAACGACGCAGTGGAGCAGGTGTTGGAGGAAAATGGTTATGTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CAGCTGCAGAGCCACCTTTTCTTGGCCTTGACCCATTaGAAGAAACTTGAGACGCGTGCCCCCGAAGCCACT +
Preference number: 6 (lower is better)
Translates to: QLQSHLFLALTH*KKLETRAPEAT
Trigger: AGTGGCTTCGGGGGCACGCGTCTCAAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGTGGCTCTGCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GCAGTTCTGCAACATCAGCCACTGTCCACGAGCCACTaGGGTCTCCAACAGCTGCAGAGCCACCTTTTCTTG +
Preference number: 6 (lower is better)
Translates to: AVLQHQPLSTSH*GLQQLQSHLFL
Trigger: CAAGAAAAGGTGGCTCTGCAGCTGTTGGAGACCGCAGTGGCTCGTGGACAGTGGCTGATGTTGCAGAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AAGAACAGCGCAGAGGCGTTGTCCTCGTCACTCAAGTaGTTGAGGAAGTGCAAGATGCAGTCCTCCGCCTCG +
Preference number: 6 (lower is better)
Translates to: KNSAEALSSSLK*LRKCKMQSSAS
Trigger: CGAGGCGGAGGACTGCATCTTGCACTTCCTCAACCACTTGAGTGACGAGGACAACGCCTCTGCGCTGTTCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GTGGACAGGAAGCGCACATTGTCGGAGGCCTCCATGTaGAGCTTGAAGAGTTCCGTCAGGATAGGCTGCACA +
Preference number: 6 (lower is better)
Translates to: VDRKRTLSEASM*SLKSSVRIGCT
Trigger: TGTGCAGCCTATCCTGACGGAACTCTTCAAGCTCCACATGGAGGCCTCCGACAATGTGCGCTTCCTGTCCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AGCAGAGGCCCGATAGCCATGTACCACCGGACCATGTaGTCCACATCCCTGGCCCTTTCTCGTTCAATGTAC +
Preference number: 6 (lower is better)
Translates to: SRGPIAMYHRTM*STSLALSRSMY
Trigger: GTACATTGAACGAGAAAGGGCCAGGGATGTGGACCACATGGTCCGGTGGTACATGGCTATCGGGCCTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AGGCTGGTTTCTTGGCCGCAAACTTCTCCATCACGATaGACTTGTCCAGCTTCCAGAGGGGCCGGTATCGCT +
Preference number: 6 (lower is better)
Translates to: RLVSWPQTSPSR*TCPASRGAGIA
Trigger: AGCGATACCGGCCCCTCTGGAAGCTGGACAAGTCCATCGTGATGGAGAAGTTTGCGGCCAAGAAACCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CTGCCAGCTCGTTCTGGATCCTCTCTAGCTCCCGTTTaGTTAGGAAGAAATTCCGCTCCAGCCTGGCCACCT +
Preference number: 6 (lower is better)
Translates to: LPARSGSSLAPV*LGRNSAPAWPP
Trigger: AGGTGGCCAGGCTGGAGCGGAATTTCTTCCTAACCAAACGGGAGCTAGAGAGGATCCAGAACGAGCTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CCGCCAGCTTCAGCTTCTCTGAAACCTCTGTGGCTTTaGACTTGGTCTCTTCCAGGGTCTGCACCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: PPASASLKPLWL*TWSLPGSAPAP
Trigger: TGGAGCTGGTGCAGACCCTGGAAGAGACCAAGTCCAAAGCCACAGAGGTTTCAGAGAAGCTGAAGCTGGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TTGAGGCTGCCCCAGGGGATGCGAGGGTCACGCTGCTaGAAGGCTTTCGTTAGGTACGTGTTTAGGATTTCC +
Preference number: 6 (lower is better)
Translates to: LRLPQGMRGSRC*KAFVRYVFRIS
Trigger: GGAAATCCTAAACACGTACCTAACGAAAGCCTTCCAGCAGCGTGACCCTCGCATCCCCTGGGGCAGCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GACAGTGTCCCCTGGCCTGACTCCGATTTGTGCTGGTaGAAGGACAGTGCGGGCATGAAAACCTGGCAGATG +
Preference number: 6 (lower is better)
Translates to: DSVPWPDSDLCW*KDSAGMKTWQM
Trigger: CATCTGCCAGGTTTTCATGCCCGCACTGTCCTTCAACCAGCACAAATCGGAGTCAGGCCAGGGGACACTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp AGGAAGCGCACATTGTCGGAGGCCTCCATGTGGAGCTaGAAGAGTTCCGTCAGGATAGGCTGCACATTGGCC +
Preference number: 6 (lower is better)
Translates to: RKRTLSEASMWS*KSSVRIGCTLA
Trigger: GGCCAATGTGCAGCCTATCCTGACGGAACTCTTCAAGCTCCACATGGAGGCCTCCGACAATGTGCGCTTCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TCAATGCAGCTGCCGTTCATCCAGCGCACGAAATGCTaGGTGACCTCCACACAGCTGCGGACACAGTGGACA +
Preference number: 6 (lower is better)
Translates to: SMQLPFIQRTKC*VTSTQLRTQWT
Trigger: TGTCCACTGTGTCCGCAGCTGTGTGGAGGTCACCAAGCATTTCGTGCGCTGGATGAACGGCAGCTGCATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GGTTTCTTGGCCGCAAACTTCTCCATCACGATGGACTaGTCCAGCTTCCAGAGGGGCCGGTATCGCTTCCAC +
Preference number: 6 (lower is better)
Translates to: GFLAANFSITMD*SSFQRGRYRFH
Trigger: GTGGAAGCGATACCGGCCCCTCTGGAAGCTGGACAAGTCCATCGTGATGGAGAAGTTTGCGGCCAAGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GGCCCCACGAATCTGCTCCCGGAGATGCTCTGCAAGTaGACTGTGTTGTCGTCCAAGCACTGGATGATGTCG +
Preference number: 6 (lower is better)
Translates to: GPTNLLPEMLCK*TVLSSKHWMMS
Trigger: CGACATCATCCAGTGCTTGGACGACAACACAGTCAACTTGCAGAGCATCTCCGGGAGCAGATTCGTGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GGTCTCCAACAGCTGCAGAGCCACCTTTTCTTGGCCTaGACCCATTGCAAGAAACTTGAGACGCGTGCCCCC +
Preference number: 6 (lower is better)
Translates to: GLQQLQSHLFLA*THCKKLETRAP
Trigger: GGGGGCACGCGTCTCAAGTTTCTTGCAATGGGTCAAGGCCAAGAAAAGGTGGCTCTGCAGCTGTTGGAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TCAGCCAGAGACCTGGTCATGCGAATGACAAGCTTGTaGAAGCGCCCCAGCTCCTGTAGCAGTACCACCGAG +
Preference number: 6 (lower is better)
Translates to: SARDLVMRMTSL*KRPSSCSSTTE
Trigger: CTCGGTGGTACTGCTACAGGAGCTGGGGCGCTTCAACAAGCTTGTCATTCGCATGACCAGGTCTCTGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp AGCTCAGCCAGAGACCTGGTCATGCGAATGACAAGCTaGTTGAAGCGCCCCAGCTCCTGTAGCAGTACCACC +
Preference number: 6 (lower is better)
Translates to: SSARDLVMRMTS*LKRPSSCSSTT
Trigger: GGTGGTACTGCTACAGGAGCTGGGGCGCTTCAACAAGCTTGTCATTCGCATGACCAGGTCTCTGGCTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp AGCACCTTCCAGGTAGAGCCCAGAAACAAAGCACCCTaGCCCCGCACGCTCGTTTACTTCATCGGCATCCTG +
Preference number: 6 (lower is better)
Translates to: STFQVEPRNKAP*PRTLVYFIGIL
Trigger: CAGGATGCCGATGAAGTAAACGAGCGTGCGGGGCAAGGGTGCTTTGTTTCTGGGCTCTACCTGGAAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CAGATCTCAATGACCTCGCCTATCAGAGACAGTGTCTTCTCCCACTaGTGGACGGTTTGCAGGAAAGGCCCCACGAATCTGCTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: QISMTSPIRDSVFSH*WTVCRKGPTNLLPE
Trigger: CTCCGGGAGCAGATTCGTGGGGCCTTTCCTGCAAACCGTCCACAAGTGGGAGAAGACACTGTCTCTGATAGGCGAGGTCATTGAGATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TCAGCCAGAGCTGTCTCAGCCTCGGCCTTCTCGACAGCGATGATCTaGTTCTGCTCTTCGATCTCTATGGCCTTCTCCTCTGCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SARAVSASAFSTAMI*FCSSISMAFSSASF
Trigger: GAAGCTGGCAGAGGAGAAGGCCATAGAGATCGAAGAGCAGAACAAGATCATCGCTGTCGAGAAGGCCGAGGCTGAGACAGCTCTGGCTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CTGATTTCAGTCACGTCGGACTTGTCCAGCTTCTGCAGCTCTAGTTaGGCAGCCTCCAGGATGGGCATGACCTCAGCCAGAGCTGTCTCA +
Preference number: 6 (lower is better)
Translates to: LISVTSDLSSFCSSS*AASRMGMTSARAVS
Trigger: TGAGACAGCTCTGGCTGAGGTCATGCCCATCCTGGAGGCTGCCAAACTAGAGCTGCAGAAGCTGGACAAGTCCGACGTGACTGAAATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TCCTGGGGGACCCTCCCCTCTGCCTGCTCTATCTTGATGGTCATGTaGAAGGAGAAGAGGAGCTTATGCCTCTCAAACAGCCCGGTGCAT +
Preference number: 6 (lower is better)
Translates to: SWGTLPSACSILMVM*KEKRSLCLSNSPVH
Trigger: ATGCACCGGGCTGTTTGAGAGGCATAAGCTCCTCTTCTCCTTCAACATGACCATCAAGATAGAGCAGGCAGAGGGGAGGGTCCCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CTGGGGCTTCTTCTTCATCTGGGAATCCAGCGCATATaGAATCTGGCCCAGCCAGTGGATCACGCACTGCTC +
Preference number: 6 (lower is better)
Translates to: LGLLLHLGIQRI*NLAQPVDHALL
Trigger: GAGCAGTGCGTGATCCACTGGCTGGGCCAGATTTCATATGCGCTGGATTCCCAGATGAAGAAGAAGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp ACACGCGCTCAGCAATCTCCCAGGCGATGCGTTCCATaGGTGGGATCATCCTCTCGTCTCTGTTGTAGTGTC +
Preference number: 6 (lower is better)
Translates to: TRAQQSPRRCVP*VGSSSRLCCSV
Trigger: GACACTACAACAGAGACGAGAGGATGATCCCACTCATGGAACGCATCGCCTGGGAGATTGCTGAGCGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp AGTGATCCAGCATGCGCTGGATCCCCTCTGTATACCTaGGGAATTTGTCTTCCTGGAGGGCCACGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: SDPACAGSPLYT*GICLPGGPRSS
Trigger: CGAGGAACGTGGCCCTCCAGGAAGACAAATTCCTCAGGTATACAGAGGGGATCCAGCGCATGCTGGATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CGACAGCCTTGTAATCCATGCCTTCACCACAGTTTGTaGCAACACACAGGAGGCCCAGGGCTTTGGCGAGGT +
Preference number: 6 (lower is better)
Translates to: RQPCNPCLHHSL*QHTGGPGLWRG
Trigger: ACCTCGCCAAAGCCCTGGGCCTCCTGTGTGTTGTCACAAACTGTGGTGAAGGCATGGATTACAAGGCTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp GGACCCATCCCGAACTTCAAGGCCTCCTGCCCGATCTaGCCAAGGATGTTGTCCTTTTCCTCTTCAGCGAAG +
Preference number: 6 (lower is better)
Translates to: GPIPNFKASCPI*PRMLSFSSSAK
Trigger: CTTCGCTGAAGAGGAAAAGGACAACATCCTTGGTCAGATCGGGCAGGAGGCCTTGAAGTTCGGGATGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp TGGGCAAGTCCACAACCAGCACCTTGGGCTTGCTCTTaGCAAGACACCCTCTCTCTATGTCCCAGTCAGCAC +
Preference number: 6 (lower is better)
Translates to: WASPQPAPWACS*QDTLSLCPSQH
Trigger: GTGCTGACTGGGACATAGAGAGAGGGTGTCTTGTCAAGAGCAAGCCCAAGGTGCTGGTTGTGGACTTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GTGAGCAGGCTCTTCTTCATGAGGGTTGGGAGGCTCTaGTCTGTGGTCTCCTTCCAATGCTCATACTTCCCG +
Preference number: 6 (lower is better)
Translates to: VSRLFFMRVGRL*SVVSFQCSYFP
Trigger: CGGGAAGTATGAGCATTGGAAGGAGACCACAGAGCAGAGCCTCCCAACCCTCATGAAGAAGAGCCTGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CCCAGTACTCATAGTAGGAAGCTAGCTTTGGGGCCCTaGCCGTGTTGGTGTGTACCACTAGACCTTCCACCT +
Preference number: 6 (lower is better)
Translates to: PSTHSRKLALGP*PCWCVPLDLPP
Trigger: AGGTGGAAGGTCTAGTGGTACACACCAACACGGGCAGGGCCCCAAAGCTAGCTTCCTACTATGAGTACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp AGGAAAGGCCCCACGAATCTGCTCCCGGAGATGCTCTaGAAGTTGACTGTGTTGTCGTCCAAGCACTGGATG +
Preference number: 6 (lower is better)
Translates to: RKGPTNLLPEML*KLTVLSSKHWM
Trigger: CATCCAGTGCTTGGACGACAACACAGTCAACTTGCAGAGCATCTCCGGGAGCAGATTCGTGGGGCCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp TGGCTCAGGGGGATGTCGCGATCCAAGATGTCGTTCTaGCACACCTGGTTGACCATCTCATCACGAAACTCC +
Preference number: 6 (lower is better)
Translates to: WLRGMSRSKMSF*HTWLTISSRNS
Trigger: GGAGTTTCGTGATGAGATGGTCAACCAGGTGTGGCAGAACGACATCTTGGATCGCGACATCCCCCTGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp TTCTTCTCCTCTTTTCGTTTGATCCAGTTGAGGGCCTaGTGCTGGGGGTCGATGCAGAGTGGGAAGCGACTG +
Preference number: 6 (lower is better)
Translates to: FFSSFRLIQLRA*CWGSMQSGKRL
Trigger: CAGTCGCTTCCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAAAGAGGAGAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CCGTTAGGTGGCTCTGTGACCACCTTTAAGGACTTCTaGAGGATTCCAATGGGGAAGCCCTTGGTGGGGTCT +
Preference number: 6 (lower is better)
Translates to: PLGGSVTTFKDF*RIPMGKPLVGS
Trigger: AGACCCCACCAAGGGCTTCCCCATTGGAATCCTGCAGAAGTCCTTAAAGGTGGTCACAGAGCCACCTAACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp TACTTGAGGCTGCCCCAGGGGATGCGAGGGTCACGCTaGTGGAAGGCTTTCGTTAGGTACGTGTTTAGGATT +
Preference number: 6 (lower is better)
Translates to: YLRLPQGMRGSR*WKAFVRYVFRI
Trigger: AATCCTAAACACGTACCTAACGAAAGCCTTCCAGCAGCGTGACCCTCGCATCCCCTGGGGCAGCCTCAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CATAGTAGGAAGCTAGCTTTGGGGCCCTGCCCGTGTTaGTGTGTACCACTAGACCTTCCACCTTGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: HSRKLALGPCPC*CVPLDLPPWSA
Trigger: TGCTGACCAAGGTGGAAGGTCTAGTGGTACACACCAACACGGGCAGGGCCCCAAAGCTAGCTTCCTACTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GCAGCTTCTCATCGTAGGCCACGCAGGCTGGTTTCTTaGCCGCAAACTTCTCCATCACGATGGACTTGTCCA +
Preference number: 6 (lower is better)
Translates to: AASHRRPRRLVS*PQTSPSRWTCP
Trigger: TGGACAAGTCCATCGTGATGGAGAAGTTTGCGGCCAAGAAACCAGCCTGCGTGGCCTACGATGAGAAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CATCGGGAATCATGGAGTTATCGCCTAAAAACGACTTaGCCACTGCATGCAAGGCCTGAGGTGGCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: HRESWSYRLKTT*PLHARPEVARA
Trigger: TGCCCTGGCCACCTCAGGCCTTGCATGCAGTGGCCAAGTCGTTTTTAGGCGATAACTCCATGATTCCCGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp ACATCATCTGTGAGGAGGTTCTCCAGTCGGAAAGGCTaGCTCAGGGGGATGTCGCGATCCAAGATGTCGTTC +
Preference number: 6 (lower is better)
Translates to: TSSVRRFSSRKG*LRGMSRSKMSF
Trigger: GAACGACATCTTGGATCGCGACATCCCCCTGAGCCAGCCTTTCCGACTGGAGAACCTCCTCACAGATGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AGCCCGAAGACCTCAAGGAAGGCTATGAGGGAGTACTaGTACATGGAGTTGACAAGCGCCATCTCCGACAGC +
Preference number: 6 (lower is better)
Translates to: SPKTSRKAMREY*YMELTSAISDS
Trigger: GCTGTCGGAGATGGCGCTTGTCAACTCCATGTACCAGTACTCCCTCATAGCCTTCCTTGAGGTCTTCGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GCCAATCTCGGCATTGGAATGGAGACCAAACACTTCTaGTGTGTTGGCGAGTGGGAGGGCCTCAATGGCTTC +
Preference number: 6 (lower is better)
Translates to: ANLGIGMETKHF*CVGEWEGLNGF
Trigger: GAAGCCATTGAGGCCCTCCCACTCGCCAACACACCAGAAGTGTTTGGTCTCCATTCCAATGCCGAGATTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CCTTGCCCCGCACGCTCGTTTACTTCATCGGCATCCTaGAACTTGGTCACTTGTGTAAACAAGGTGGACCGG +
Preference number: 6 (lower is better)
Translates to: PCPARSFTSSAS*NLVTCVNKVDR
Trigger: CCGGTCCACCTTGTTTACACAAGTGACCAAGTTCCAGGATGCCGATGAAGTAAACGAGCGTGCGGGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CTCAGCATCTCCTCGAATAGCATAGGGTTGGTGAGGTaGAAGGCAGTGTATACGCGGTCGCGCATCCACAGG +
Preference number: 6 (lower is better)
Translates to: LSISSNSIGLVR*KAVYTRSRIHR
Trigger: CCTGTGGATGCGCGACCGCGTATACACTGCCTTCAACCTCACCAACCCTATGCTATTCGAGGAGATGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp AGCATGCGCTGGATCCCCTCTGTATACCTGAGGAATTaGTCTTCCTGGAGGGCCACGTTCCTCGCCAGTTCA +
Preference number: 6 (lower is better)
Translates to: SMRWIPSVYLRN*SSWRATFLASS
Trigger: TGAACTGGCGAGGAACGTGGCCCTCCAGGAAGACAAATTCCTCAGGTATACAGAGGGGATCCAGCGCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CATTGTGGTGTGGCGGGTCAGCATGGTCTCGAACATTaGGACCACTTTATCCACCTGGACTGGCAGGAGCAC +
Preference number: 6 (lower is better)
Translates to: HCGVAGQHGLEH*DHFIHLDWQEH
Trigger: GTGCTCCTGCCAGTCCAGGTGGATAAAGTGGTCCAAATGTTCGAGACCATGCTGACCCGCCACACCACAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GGCGGCCCATACGTGTCCTTAGTCCGCTTCTCCACATaGGCTTCCAGATTTCTCTGGATGTCCAGGGATGTG +
Preference number: 6 (lower is better)
Translates to: GGPYVSLVRFST*ASRFLWMSRDV
Trigger: CACATCCCTGGACATCCAGAGAAATCTGGAAGCCAATGTGGAGAAGCGGACTAAGGACACGTATGGGCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GGCTTCGCGAATGACCTGATTTCAGTCACGTCGGACTaGTCCAGCTTCTGCAGCTCTAGTTTGGCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: GFANDLISVTSD*SSFCSSSLAAS
Trigger: GGAGGCTGCCAAACTAGAGCTGCAGAAGCTGGACAAGTCCGACGTGACTGAAATCAGGTCATTCGCGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CACCTGACGTTTTCTGAGCCCAGCCCAGAGATGAGCTaGTCCGCTGCGATCAACCGCCTCTCCATAATCTCT +
Preference number: 6 (lower is better)
Translates to: HLTFSEPSPEMS*SAAINRLSIIS
Trigger: AGAGATTATGGAGAGGCGGTTGATCGCAGCGGACAAGCTCATCTCTGGGCTGGGCTCAGAAAACGTCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TCCCCCAGAATGATGAACTGGCGGCCTTGGGAGGTCTaGATGTTCTTCTCCAGGACGCTGTCAATCACAGGG +
Preference number: 6 (lower is better)
Translates to: SPRMMNWRPWEV*MFFSRTLSITG
Trigger: CCCTGTGATTGACAGCGTCCTGGAGAAGAACATCAAGACCTCCCAAGGCCGCCAGTTCATCATTCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TTCTCTCCAGACAGTGTCCCCTGGCCTGACTCCGATTTGTGCTGGTaGAAGGACAGTGCGGGCATGAAAACCTGGCAGATGACGTCCTTT +
Preference number: 6 (lower is better)
Translates to: FSPDSVPWPDSDLCW*KDSAGMKTWQMTSF
Trigger: AAAGGACGTCATCTGCCAGGTTTTCATGCCCGCACTGTCCTTCAACCAGCACAAATCGGAGTCAGGCCAGGGGACACTGTCTGGAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CGTCGTAGATCTTGCCTTCCCAGTACTCATAGTAGGAAGCTAGCTTaGGGGCCCTGCCCGTGTTGGTGTGTACCACTAGACCTTCCACCT +
Preference number: 6 (lower is better)
Translates to: RRRSCLPSTHSRKLA*GPCPCWCVPLDLPP
Trigger: AGGTGGAAGGTCTAGTGGTACACACCAACACGGGCAGGGCCCCAAAGCTAGCTTCCTACTATGAGTACTGGGAAGGCAAGATCTACGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GCCCAGTTCCCTTCCGAATCCACAGTGGGCATTGACGAGAGGCGTTaGATACACTCATCAAACTTCACCCTTCCCTCCTCAAGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: AQFPSESTVGIDERR*IHSSNFTLPSSSRE
Trigger: CTCCCTGCTTGAGGAGGGAAGGGTGAAGTTTGATGAGTGTATCAAACGCCTCTCGTCAATGCCCACTGTGGATTCGGAAGGGAACTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GAAGCAACCCGTAGGTTATTCTTCTCCTCTTTTCGTTTGATCCAGTaGAGGGCCTGCTGCTGGGGGTCGATGCAGAGTGGGAAGCGACTG +
Preference number: 6 (lower is better)
Translates to: EATRRLFFSSFRLIQ*RACCWGSMQSGKRL
Trigger: CAGTCGCTTCCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAAAGAGGAGAAGAATAACCTACGGGTTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp ACCTCCTTGTCCCCCAGAATGATGAACTGGCGGCCTTGGGAGGTCTaGATGTTCTTCTCCAGGACGCTGTCAATCACAGGGTCGATGTAC +
Preference number: 6 (lower is better)
Translates to: TSLSPRMMNWRPWEV*MFFSRTLSITGSMY
Trigger: GTACATCGACCCTGTGATTGACAGCGTCCTGGAGAAGAACATCAAGACCTCCCAAGGCCGCCAGTTCATCATTCTGGGGGACAAGGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp ATCTTGAGGATGGGCAAGTCCACAACCAGCACCTTGGGCTTGCTCTaGACAAGACACCCTCTCTCTATGTCCCAGTCAGCACCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: ILRMGKSTTSTLGLL*TRHPLSMSQSAPSR
Trigger: CCTGGAAGGTGCTGACTGGGACATAGAGAGAGGGTGTCTTGTCAAGAGCAAGCCCAAGGTGCTGGTTGTGGACTTGCCCATCCTCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GGGATGATCTTGAGGATGGGCAAGTCCACAACCAGCACCTTGGGCTaGCTCTTGACAAGACACCCTCTCTCTATGTCCCAGTCAGCACCT +
Preference number: 6 (lower is better)
Translates to: GMILRMGKSTTSTLG*LLTRHPLSMSQSAP
Trigger: AGGTGCTGACTGGGACATAGAGAGAGGGTGTCTTGTCAAGAGCAAGCCCAAGGTGCTGGTTGTGGACTTGCCCATCCTCAAGATCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp TCCAGGATCCAGGTGGTGCGGGTGGTATCCACTGTGTaGACCAGGATGTCGACAAATTTCTTCTCGTGGCTG +
Preference number: 6 (lower is better)
Translates to: SRIQVVRVVSTV*TRMSTNFFSWL
Trigger: CAGCCACGAGAAGAAATTTGTCGACATCCTGGTTCACACAGTGGATACCACCCGCACCACCTGGATCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CTTTTCCTCTTCAGCGAAGAGCGCGGGGACCATTCCTaGGGTCAGCATGTTGTTGATGAGTTCCAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: LFLFSEERGDHS*GQHVVDEFQEA
Trigger: GGCTTCCTGGAACTCATCAACAACATGCTGACCTCAGGAATGGTCCCCGCGCTCTTCGCTGAAGAGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CCAGAGCTGTCTCAGCCTCGGCCTTCTCGACAGCGATaGTCTTGTTCTGCTCTTCGATCTCTATGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: PELSQPRPSRQR*SCSALRSLWPS
Trigger: AGAAGGCCATAGAGATCGAAGAGCAGAACAAGATCATCGCTGTCGAGAAGGCCGAGGCTGAGACAGCTCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp TCTCTCAAACAATCGCTTCCGGTCAAACTCCCATCGTaGCTCCCGACCAGAAGCCTCAATCTTGGCCCGAAT +
Preference number: 6 (lower is better)
Translates to: SLKQSLPVKLPS*LPTRSLNLGPN
Trigger: ATTCGGGCCAAGATTGAGGCTTCTGGTCGGGAGGCACGATGGGAGTTTGACCGGAAGCGATTGTTTGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp AAGTCTAACTCCTCCTGGGGGACCCTCCCCTCTGCCTaGTCTATCTTGATGGTCATGTTGAAGGAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: KSNSSWGTLPSA*SILMVMLKEKR
Trigger: CCTCTTCTCCTTCAACATGACCATCAAGATAGAGCAGGCAGAGGGGAGGGTCCCCCAGGAGGAGTTAGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CTGCAGCTCCAGCAGATGACCCCACATGTCTCGAGCTaGCTGTGTGTAATAGCCAATCTCGGCATTGGAATG +
Preference number: 6 (lower is better)
Translates to: LQLQQMTPHVSS*LCVIANLGIGM
Trigger: CATTCCAATGCCGAGATTGGCTATTACACACAGGCAGCTCGAGACATGTGGGGTCATCTGCTGGAGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GCGCTCAGCAATCTCCCAGGCGATGCGTTCCATGAGTaGGATCATCCTCTCGTCTCTGTTGTAGTGTCTAGA +
Preference number: 6 (lower is better)
Translates to: ALSNLPGDAFHE*DHPLVSVVVSR
Trigger: TCTAGACACTACAACAGAGACGAGAGGATGATCCCACTCATGGAACGCATCGCCTGGGAGATTGCTGAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GTAGAACTGCAGCTTCTCATCGTAGGCCACGCAGGCTaGTTTCTTGGCCGCAAACTTCTCCATCACGATGGA +
Preference number: 6 (lower is better)
Translates to: VELQLLIVGHAG*FLGRKLLHHDG
Trigger: TCCATCGTGATGGAGAAGTTTGCGGCCAAGAAACCAGCCTGCGTGGCCTACGATGAGAAGCTGCAGTTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GTGGGTGTGATGCTCAAGCCCAGGTGCTTCCGAACCTaGTCCAGGTCAAAGATCTTGGGCATCTTGTTCTCA +
Preference number: 6 (lower is better)
Translates to: VGVMLKPRCFRT*SRSKILGILFS
Trigger: TGAGAACAAGATGCCCAAGATCTTTGACCTGGACCAGGTTCGGAAGCACCTGGGCTTGAGCATCACACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TCTTGCCTTCCCAGTACTCATAGTAGGAAGCTAGCTTaGGGGCCCTGCCCGTGTTGGTGTGTACCACTAGAC +
Preference number: 6 (lower is better)
Translates to: SCLPSTHSRKLA*GPCPCWCVPLD
Trigger: GTCTAGTGGTACACACCAACACGGGCAGGGCCCCAAAGCTAGCTTCCTACTATGAGTACTGGGAAGGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TACATGGTGATGGGGAGATCAAAGAGCTTCTCCGCATaGGCCAGTTCCTGCCGGTTCTTCTCGTGCTTTGCC +
Preference number: 6 (lower is better)
Translates to: YMVMGRSKSFSA*ASSCRFFSCFA
Trigger: GGCAAAGCACGAGAAGAACCGGCAGGAACTGGCCAATGCGGAGAAGCTCTTTGATCTCCCCATCACCATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp AATCTGCTCCCGGAGATGCTCTGCAAGTTGACTGTGTaGTCGTCCAAGCACTGGATGATGTCGTCCACGGAC +
Preference number: 6 (lower is better)
Translates to: NLLPEMLCKLTV*SSKHWMMSSTD
Trigger: GTCCGTGGACGACATCATCCAGTGCTTGGACGACAACACAGTCAACTTGCAGAGCATCTCCGGGAGCAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TTGATCATATGCTCTTGCACGCACAGTGGGTCACTGTaGCCCAAGATGCTGAGCAGCTCGTCGTCCGAGATG +
Preference number: 6 (lower is better)
Translates to: LIICSCTHSGSL*PKMLSSSSSEM
Trigger: CATCTCGGACGACGAGCTGCTCAGCATCTTGGGCAACAGTGACCCACTGTGCGTGCAAGAGCATATGATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GCCTCCTTCAGCTTGTCCAGCCCTCCTTCCAGACGCTaGCACTGGGCTATGTTGTACTGGGTTTTCTCATCT +
Preference number: 6 (lower is better)
Translates to: ASFSLSSPPSRR*HWAMLYWVFSS
Trigger: AGATGAGAAAACCCAGTACAACATAGCCCAGTGCAAGCGTCTGGAAGGAGGGCTGGACAAGCTGAAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GCTGTCTCAGCCTCGGCCTTCTCGACAGCGATGATCTaGTTCTGCTCTTCGATCTCTATGGCCTTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: AVSASAFSTAMI*FCSSISMAFSS
Trigger: AGAGGAGAAGGCCATAGAGATCGAAGAGCAGAACAAGATCATCGCTGTCGAGAAGGCCGAGGCTGAGACAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CGTAGGTTATTCTTCTCCTCTTTTCGTTTGATCCAGTaGAGGGCCTGCTGCTGGGGGTCGATGCAGAGTGGG +
Preference number: 6 (lower is better)
Translates to: RRLFFSSFRLIQ*RACCWGSMQSG
Trigger: CCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAAAGAGGAGAAGAATAACCTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CCAAGGAAGAGAGACCTGGCTACATCATCTAACTCATaGCTCATTCCGACTTCCCCAGCCAAGGCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: PRKRDLATSSNS*LIPTSPAKALW
Trigger: CCAGAGGGCCTTGGCTGGGGAAGTCGGAATGAGCAATGAGTTAGATGATGTAGCCAGGTCTCTCTTCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CTCGTTTACTTCATCGGCATCCTGGAACTTGGTCACTaGTGTAAACAAGGTGGACCGGTCCAACGGCCAGCC +
Preference number: 6 (lower is better)
Translates to: LVYFIGILELGH*CKQGGPVQRPA
Trigger: GGCTGGCCGTTGGACCGGTCCACCTTGTTTACACAAGTGACCAAGTTCCAGGATGCCGATGAAGTAAACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CCCGCACGCTCGTTTACTTCATCGGCATCCTGGAACTaGGTCACTTGTGTAAACAAGGTGGACCGGTCCAAC +
Preference number: 6 (lower is better)
Translates to: PARSFTSSASWN*VTCVNKVDRSN
Trigger: GTTGGACCGGTCCACCTTGTTTACACAAGTGACCAAGTTCCAGGATGCCGATGAAGTAAACGAGCGTGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TTGAGGATGGGCAAGTCCACAACCAGCACCTTGGGCTaGCTCTTGACAAGACACCCTCTCTCTATGTCCCAG +
Preference number: 6 (lower is better)
Translates to: LRMGKSTTSTLG*LLTRHPLSMSQ
Trigger: CTGGGACATAGAGAGAGGGTGTCTTGTCAAGAGCAAGCCCAAGGTGCTGGTTGTGGACTTGCCCATCCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GCCTCCATGTGGAGCTTGAAGAGTTCCGTCAGGATAGGCTGCACATaGGCCGTGAGCATGGACTCTGCTTCTTTGATCACCTCTAAGACC +
Preference number: 6 (lower is better)
Translates to: ASMWSLKSSVRIGCT*AVSMDSASLITSKT
Trigger: GGTCTTAGAGGTGATCAAAGAAGCAGAGTCCATGCTCACGGCCAATGTGCAGCCTATCCTGACGGAACTCTTCAAGCTCCACATGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GTCCCCCTGTCTATGATCGCTGAGTCCTCAGCTGTGATGATATTCTaGGTGAGCAGGCTCTTCTTCATGAGGGTTGGGAGGCTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: VPLSMIAESSAVMIF*VSRLFFMRVGRLCS
Trigger: AGAGCAGAGCCTCCCAACCCTCATGAAGAAGAGCCTGCTCACCAAGAATATCATCACAGCTGAGGACTCAGCGATCATAGACAGGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CCCTACCACCATTGTGGTGTGGCGGGTCAGCATGGTCTCGAACATTaGGACCACTTTATCCACCTGGACTGGCAGGAGCACATAACCATT +
Preference number: 6 (lower is better)
Translates to: PYHHCGVAGQHGLEH*DHFIHLDWQEHITI
Trigger: AATGGTTATGTGCTCCTGCCAGTCCAGGTGGATAAAGTGGTCCAAATGTTCGAGACCATGCTGACCCGCCACACCACAATGGTGGTAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GTCATAGTCAACCTCCTTGTCCCCCAGAATGATGAACTGGCGGCCTaGGGAGGTCTTGATGTTCTTCTCCAGGACGCTGTCAATCACAGG +
Preference number: 6 (lower is better)
Translates to: VIVNLLVPQNDELAA*GGLDVLLQDAVNHR
Trigger: CCTGTGATTGACAGCGTCCTGGAGAAGAACATCAAGACCTCCCAAGGCCGCCAGTTCATCATTCTGGGGGACAAGGAGGTTGACTATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp AGCGTGAGCCTGGAGTTGATGTCGTCGGCATTCTTGTaGATCTGGTGGACCAGAGTTTCGAACTTGCCGATG +
Preference number: 6 (lower is better)
Translates to: SVSLELMSSAFL*IWWTRVSNLPM
Trigger: CATCGGCAAGTTCGAAACTCTGGTCCACCAGATTCACAAGAATGCCGACGACATCAACTCCAGGCTCACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CTCGAGTGGTGGGATCCAGGATGCCATACAGCTCAATaGCACTCACGGCTTTGGGGTTCAGGATGTACAACT +
Preference number: 6 (lower is better)
Translates to: LEWWDPGCHTAQ*HSRLWGSGCTT
Trigger: AGTTGTACATCCTGAACCCCAAAGCCGTGAGTGTCATTGAGCTGTATGGCATCCTGGATCCCACCACTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp TCCCAAAGATGTCGGAAAACTTTTGTGACAGGAGAATaGTGTCTTCCCAGCCCTGGTCCGACAGCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: SQRCRKTFVTGE*CLPSPGPTARC
Trigger: GCACCTGGCTGTCGGACCAGGGCTGGGAAGACATCATTCTCCTGTCACAAAAGTTTTCCGACATCTTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GCATATGAAATCTGGCCCAGCCAGTGGATCACGCACTaGTCCAAATTCTCCACCAGTTCTGGATTGGACACC +
Preference number: 6 (lower is better)
Translates to: AYEIWPSQWITH*SKFSTSSGLDT
Trigger: GGTGTCCAATCCAGAACTGGTGGAGAATTTGGAGCAGTGCGTGATCCACTGGCTGGGCCAGATTTCATATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp TGGAAGCTTCGTCTGCTCGTAGAGGGCGCTCAGCGTTaGATTTCTCTCTCTCCAGAATTCGATTTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: WKLRLLVEGAQR*ISLSPEFDFSQ
Trigger: CTGGCTGAAATCGAATTCTGGAGAGAGAGAAATGCAACGCTGAGCGCCCTCTACGAGCAGACGAAGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp TCCATGTGGAGCTTGAAGAGTTCCGTCAGGATAGGCTaGACATTGGCCGTGAGCATGGACTCTGCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: SMWSLKSSVRIG*TLAVSMDSASL
Trigger: CAAAGAAGCAGAGTCCATGCTCACGGCCAATGTGCAGCCTATCCTGACGGAACTCTTCAAGCTCCACATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp AGCTTGAGAGTGTTTCTAGCCTCCTGGGTCTTGAACTaGGCGTTTGCTCGGTTTTCCTTGAACAGGGTGCGT +
Preference number: 6 (lower is better)
Translates to: SLRVFLASWVLN*AFARFSLNRVR
Trigger: ACGCACCCTGTTCAAGGAAAACCGAGCAAACGCGCAGTTCAAGACCCAGGAGGCTAGAAACACTCTCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CCGTGTCTGTGGGAAAGATTTTGTAGATCGCCATGGTaGGGTATCGCTCCTGGATGTCCTTGTACCTCAGCT +
Preference number: 6 (lower is better)
Translates to: PCLWERFCRSPW*GIAPGCPCTSA
Trigger: AGCTGAGGTACAAGGACATCCAGGAGCGATACCGCACCATGGCGATCTACAAAATCTTTCCCACAGACACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp ATCTCTGTGAAAGTTCGCTTGATGCCCCCAAGGGCGTaGTCCACGTTCATCGATTCCGTGAAGAGAGATTCC +
Preference number: 6 (lower is better)
Translates to: ISVKVRLMPPRA*STFIDSVKRDS
Trigger: GGAATCTCTCTTCACGGAATCGATGAACGTGGAGCACGCCCTTGGGGGCATCAAGCGAACTTTCACAGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp TTGCGGAGGTTCTTGAGGAAGCCCTCGATACCTTCCTaGAGATACTGGACATTCAGGTTGATCCAGAGGGTC +
Preference number: 6 (lower is better)
Translates to: LRRFLRKPSIPS*RYWTFRLIQRV
Trigger: GACCCTCTGGATCAACCTGAATGTCCAGTATCTGCAGGAAGGTATCGAGGGCTTCCTCAAGAACCTCCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CCTCCTTCAGCTTGTCCAGCCCTCCTTCCAGACGCTTaGACTGGGCTATGTTGTACTGGGTTTTCTCATCTA +
Preference number: 6 (lower is better)
Translates to: PPSACPALLPDA*TGLCCTGFSHL
Trigger: TAGATGAGAAAACCCAGTACAACATAGCCCAGTGCAAGCGTCTGGAAGGAGGGCTGGACAAGCTGAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp AGGAAGGGGGTCCCATACTTTATGGACATCTCGAGCTaGTTCAGGAAGTCGGGGTCATTGAAGGAAGCAACC +
Preference number: 6 (lower is better)
Translates to: RKGVPYFMDISS*FRKSGSLKEAT
Trigger: GGTTGCTTCCTTCAATGACCCCGACTTCCTGAAGCAGCTCGAGATGTCCATAAAGTATGGGACCCCCTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CAAGGAAGAGAGACCTGGCTACATCATCTAACTCATTaGTCATTCCGACTTCCCCAGCCAAGGCCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: QGRETWLHHLTH*SFRLPQPRPSG
Trigger: TCCAGAGGGCCTTGGCTGGGGAAGTCGGAATGAGCAATGAGTTAGATGATGTAGCCAGGTCTCTCTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TGGGAATCCAGCGCATATGAAATCTGGCCCAGCCAGTaGATCACGCACTGCTCCAAATTCTCCACCAGTTCT +
Preference number: 6 (lower is better)
Translates to: WESSAYEIWPSQ*ITHCSKFSTSS
Trigger: AGAACTGGTGGAGAATTTGGAGCAGTGCGTGATCCACTGGCTGGGCCAGATTTCATATGCGCTGGATTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CTCCAGAATTCGATTTCAGCCAGAGGGCCATTGCCCTaGGGCTTCTTCTTCATCTGGGAATCCAGCGCATAT +
Preference number: 6 (lower is better)
Translates to: LQNSISARGPLP*GFFFIWESSAY
Trigger: ATATGCGCTGGATTCCCAGATGAAGAAGAAGCCCCAGGGCAATGGCCCTCTGGCTGAAATCGAATTCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GATATTCTTGGTGAGCAGGCTCTTCTTCATGAGGGTTaGGAGGCTCTGCTCTGTGGTCTCCTTCCAATGCTC +
Preference number: 6 (lower is better)
Translates to: DILGEQALLHEG*EALLCGLLPML
Trigger: GAGCATTGGAAGGAGACCACAGAGCAGAGCCTCCCAACCCTCATGAAGAAGAGCCTGCTCACCAAGAATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AAATGCTTGGTGACCTCCACACAGCTGCGGACACAGTaGACACACATCTTATCGATCTCGTTGGCGTTTGGG +
Preference number: 6 (lower is better)
Translates to: KCLVTSTQLRTQ*THILSISLAFG
Trigger: CCCAAACGCCAACGAGATCGATAAGATGTGTGTCCACTGTGTCCGCAGCTGTGTGGAGGTCACCAAGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AGCAGCCTGTGGATGTTTTGGGGGATCATGAGGGCTTaGTCCATGATCTGGGTGTTCTGGGAGATGTCATTG +
Preference number: 6 (lower is better)
Translates to: SSLWMFWGIMRA*SMIWVFWEMSL
Trigger: CAATGACATCTCCCAGAACACCCAGATCATGGACCAAGCCCTCATGATCCCCCAAAACATCCACAGGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GCTCCGTGTCTGTGGGAAAGATTTTGTAGATCGCCATaGTGCGGTATCGCTCCTGGATGTCCTTGTACCTCA +
Preference number: 6 (lower is better)
Translates to: APCLWERFCRSP*CGIAPGCPCTS
Trigger: TGAGGTACAAGGACATCCAGGAGCGATACCGCACCATGGCGATCTACAAAATCTTTCCCACAGACACGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GCCTCCAGTTCCTTTTGGATCGCTGCCAGCTCGTTCTaGATCCTCTCTAGCTCCCGTTTGGTTAGGAAGAAA +
Preference number: 6 (lower is better)
Translates to: ASSSFWIAASSF*ILSSSRLVRKK
Trigger: TTTCTTCCTAACCAAACGGGAGCTAGAGAGGATCCAGAACGAGCTGGCAGCGATCCAAAAGGAACTGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GGGATGTCGCGATCCAAGATGTCGTTCTGCCACACCTaGTTGACCATCTCATCACGAAACTCCCAGGTAAAG +
Preference number: 6 (lower is better)
Translates to: GMSRSKMSFCHT*LTISSRNSQVK
Trigger: CTTTACCTGGGAGTTTCGTGATGAGATGGTCAACCAGGTGTGGCAGAACGACATCTTGGATCGCGACATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CCAGGTGCTTCCGAACCTGGTCCAGGTCAAAGATCTTaGGCATCTTGTTCTCAATGTCTTTGGCAACCTGGC +
Preference number: 6 (lower is better)
Translates to: PGASEPGPGQRS*ASCSQCLWQPG
Trigger: GCCAGGTTGCCAAAGACATTGAGAACAAGATGCCCAAGATCTTTGACCTGGACCAGGTTCGGAAGCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TGGAGCTTGAAGAGTTCCGTCAGGATAGGCTGCACATaGGCCGTGAGCATGGACTCTGCTTCTTTGATCACC +
Preference number: 6 (lower is better)
Translates to: WSLKSSVRIGCT*AVSMDSASLIT
Trigger: GGTGATCAAAGAAGCAGAGTCCATGCTCACGGCCAATGTGCAGCCTATCCTGACGGAACTCTTCAAGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CAGCAGCCTGTGGATGTTTTGGGGGATCATGAGGGCTaGGTCCATGATCTGGGTGTTCTGGGAGATGTCATT +
Preference number: 6 (lower is better)
Translates to: QQPVDVLGDHEG*VHDLGVLGDVI
Trigger: AATGACATCTCCCAGAACACCCAGATCATGGACCAAGCCCTCATGATCCCCCAAAACATCCACAGGCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ATTATCTCACTCCGGGTGATCTCTGTGAAAGTTCGCTaGATGCCCCCAAGGGCGTGCTCCACGTTCATCGAT +
Preference number: 6 (lower is better)
Translates to: IISLRVISVKVR*MPPRACSTFID
Trigger: ATCGATGAACGTGGAGCACGCCCTTGGGGGCATCAAGCGAACTTTCACAGAGATCACCCGGAGTGAGATAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TTCTTCATGGCCTGCTTGTCCCCTTGCTTGACCTTGTaGAAGACATCTTCCACTTCCCAGGTCCACCACACC +
Preference number: 6 (lower is better)
Translates to: FFMACLSPCLTL*KTSSTSQVHHT
Trigger: GGTGTGGTGGACCTGGGAAGTGGAAGATGTCTTCAACAAGGTCAAGCAAGGGGACAAGCAGGCCATGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ATCAAGTTCAGGGACTCCTCCGATGGGAAAGGGACATaGAAGACGCTGAACAGTGAGAGGAATCTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: IKFRDSSDGKGT*KTLNSERNLGS
Trigger: GGACCCCAGATTCCTCTCACTGTTCAGCGTCTTCAATGTCCCTTTCCCATCGGAGGAGTCCCTGAACTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ATGTCGCGATCCAAGATGTCGTTCTGCCACACCTGGTaGACCATCTCATCACGAAACTCCCAGGTAAAGGCG +
Preference number: 6 (lower is better)
Translates to: MSRSKMSFCHTW*TISSRNSQVKA
Trigger: CGCCTTTACCTGGGAGTTTCGTGATGAGATGGTCAACCAGGTGTGGCAGAACGACATCTTGGATCGCGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GAAGCAACCCGTAGGTTATTCTTCTCCTCTTTTCGTTaGATCCAGTTGAGGGCCTGCTGCTGGGGGTCGATG +
Preference number: 6 (lower is better)
Translates to: EATRRLFFSSFR*IQLRACCWGSM
Trigger: CATCGACCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAAAGAGGAGAAGAATAACCTACGGGTTGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TCGGCATTGGAATGGAGACCAAACACTTCTGGTGTGTaGGCGAGTGGGAGGGCCTCAATGGCTTCGACAAAT +
Preference number: 6 (lower is better)
Translates to: SALEWRPNTSGV*ASGRASMASTN
Trigger: ATTTGTCGAAGCCATTGAGGCCCTCCCACTCGCCAACACACCAGAAGTGTTTGGTCTCCATTCCAATGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp AGCTCAGGGTACATGGTGATGGGGAGATCAAAGAGCTTCTCCGCATaGGCCAGTTCCTGCCGGTTCTTCTCGTGCTTTGCCAATTCCTTT +
Preference number: 6 (lower is better)
Translates to: SSGYMVMGRSKSFSA*ASSCRFFSCFANSF
Trigger: AAAGGAATTGGCAAAGCACGAGAAGAACCGGCAGGAACTGGCCAATGCGGAGAAGCTCTTTGATCTCCCCATCACCATGTACCCTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GCTGTGCATCTTCTTGCCGTAGTTCTTCATGGCCTGCTTGTCCCCTaGCTTGACCTTGTTGAAGACATCTTCCACTTCCCAGGTCCACCA +
Preference number: 6 (lower is better)
Translates to: AVHLLAVVLHGLLVP*LDLVEDIFHFPGPP
Trigger: TGGTGGACCTGGGAAGTGGAAGATGTCTTCAACAAGGTCAAGCAAGGGGACAAGCAGGCCATGAAGAACTACGGCAAGAAGATGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GAATCCACGATGTCCCGGGCGTGGACATCGATGATCAGGACAGTGTaGTATTTCTTCCTGTCGTTTTTGCTCAGCTCCATGGTGATCCGC +
Preference number: 6 (lower is better)
Translates to: ESTMSRAWTSMIRTV*YFFLSFLLSSMVIR
Trigger: GCGGATCACCATGGAGCTGAGCAAAAACGACAGGAAGAAATACAACACTGTCCTGATCATCGATGTCCACGCCCGGGACATCGTGGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CGGGTCAGGTGTTCCAGCGCGTCGTCAAACAGCACCAGGTTCATCTaGGTGTTGACTTCGTTGTACTCCTCGAGGATTTCCTCAAACAGT +
Preference number: 6 (lower is better)
Translates to: RVRCSSASSNSTRFI*VLTSLYSSRISSNS
Trigger: ACTGTTTGAGGAAATCCTCGAGGAGTACAACGAAGTCAACACCAAGATGAACCTGGTGCTGTTTGACGACGCGCTGGAACACCTGACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TTTTGGATCGCTGCCAGCTCGTTCTGGATCCTCTCTAGCTCCCGTTaGGTTAGGAAGAAATTCCGCTCCAGCCTGGCCACCTTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: FWIAASSFWILSSSR*VRKKFRSSLATFSL
Trigger: AAGAGAAAAGGTGGCCAGGCTGGAGCGGAATTTCTTCCTAACCAAACGGGAGCTAGAGAGGATCCAGAACGAGCTGGCAGCGATCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TCATTGAAGGAAGCAACCCGTAGGTTATTCTTCTCCTCTTTTCGTTaGATCCAGTTGAGGGCCTGCTGCTGGGGGTCGATGCAGAGTGGG +
Preference number: 6 (lower is better)
Translates to: SLKEATRRLFFSSFR*IQLRACCWGSMQSG
Trigger: CCCACTCTGCATCGACCCCCAGCAGCAGGCCCTCAACTGGATCAAACGAAAAGAGGAGAAGAATAACCTACGGGTTGCTTCCTTCAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp AAGTCTAACTCCTCCTGGGGGACCCTCCCCTCTGCCTGCTCTATCTaGATGGTCATGTTGAAGGAGAAGAGGAGCTTATGCCTCTCAAAC +
Preference number: 6 (lower is better)
Translates to: KSNSSWGTLPSACSI*MVMLKEKRSLCLSN
Trigger: GTTTGAGAGGCATAAGCTCCTCTTCTCCTTCAACATGACCATCAAGATAGAGCAGGCAGAGGGGAGGGTCCCCCAGGAGGAGTTAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GATGTTCACCAGCAGCCTGTGGATGTTTTGGGGGATCATGAGGGCTaGGTCCATGATCTGGGTGTTCTGGGAGATGTCATTGTAGAAGCT +
Preference number: 6 (lower is better)
Translates to: DVHQQPVDVLGDHEG*VHDLGVLGDVIVEA
Trigger: AGCTTCTACAATGACATCTCCCAGAACACCCAGATCATGGACCAAGCCCTCATGATCCCCCAAAACATCCACAGGCTGCTGGTGAACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TTGAGGAAGCCCTCGATACCTTCCTGCAGATACTGGACATTCAGGTaGATCCAGAGGGTCTGGGACCATTCCTCTTTGGCAAGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: LRKPSIPSCRYWTFR*IQRVWDHSSLASFR
Trigger: TCTGAAGCTTGCCAAAGAGGAATGGTCCCAGACCCTCTGGATCAACCTGAATGTCCAGTATCTGCAGGAAGGTATCGAGGGCTTCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CCATCGAACAAAATATACTTCCGTTCCTTCTTGTCGGTCGGCCTGTaGATCTCCCGGAAGATGTTCGACAGCACCCCATCTGTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: PSNKIYFRSFLSVGL*ISRKMFDSTPSVQS
Trigger: AGACTGGACAGATGGGGTGCTGTCGAACATCTTCCGGGAGATCAACAGGCCGACCGACAAGAAGGAACGGAAGTATATTTTGTTCGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GCTGTCTTAGAAGTGCCGGATTCACCCACAAAAAGAACAGGGTGCTaGATTTTAACCATCTGCTCCAGGATCCAGGTGGTGCGGGTGGTA +
Preference number: 6 (lower is better)
Translates to: AVLEVPDSPTKRTGC*ILTICSRIQVVRVV
Trigger: TACCACCCGCACCACCTGGATCCTGGAGCAGATGGTTAAAATCAAGCACCCTGTTCTTTTTGTGGGTGAATCCGGCACTTCTAAGACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TGGATGGTCGCCTCCTTCAGCTTGTCCAGCCCTCCTTCCAGACGCTaGCACTGGGCTATGTTGTACTGGGTTTTCTCATCTAGTAGTTTT +
Preference number: 6 (lower is better)
Translates to: WMVASFSLSSPPSRR*HWAMLYWVFSSSSF
Trigger: AAAACTACTAGATGAGAAAACCCAGTACAACATAGCCCAGTGCAAGCGTCTGGAAGGAGGGCTGGACAAGCTGAAGGAGGCGACCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TGGGTGATGGAATCGAAGTCGATTTCCATCAGGGACCTCAAGAAGTaGGGGTCGGACATCATGCCCTTGGCAGTTTTCCAGTTAAGCTCC +
Preference number: 6 (lower is better)
Translates to: WVMESKSISIRDLKK*GSDIMPLAVFQLSS
Trigger: GGAGCTTAACTGGAAAACTGCCAAGGGCATGATGTCCGACCCCAACTTCTTGAGGTCCCTGATGGAAATCGACTTCGATTCCATCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CTCGTTGGCGTTTGGGTGGAGAACGATTTCTGGAGCTaGCAAGATGGTTTCCGCTTGGAACAGAGGGACATT +
Preference number: 6 (lower is better)
Translates to: LVGVWVENDFWS*QDGFRLEQRDI
Trigger: AATGTCCCTCTGTTCCAAGCGGAAACCATCTTGTCAGCTCCAGAAATCGTTCTCCACCCAAACGCCAACGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CCTCGATACCTTCCTGCAGATACTGGACATTCAGGTTaGTCCAGAGGGTCTGGGACCATTCCTCTTTGGCAA +
Preference number: 6 (lower is better)
Translates to: PRYLPADTGHSG*SRGSGTIPLWQ
Trigger: TTGCCAAAGAGGAATGGTCCCAGACCCTCTGGATCAACCTGAATGTCCAGTATCTGCAGGAAGGTATCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp CCCTTTTCTAGCAACAGCTTCAGCAAAGCGATGGGCTaGTGGGTACCATACTCATCCACCTTTGGCATGTTC +
Preference number: 6 (lower is better)
Translates to: PFSSNSFSKAMG*WVPYSSTFGMF
Trigger: GAACATGCCAAAGGTGGATGAGTATGGTACCCAGCAGCCCATCGCTTTGCTGAAGCTGTTGCTAGAAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GACTTCGTTGTACTCCTCGAGGATTTCCTCAAACAGTaGCTTGGCGGCCTCGTAGTCCTGGATGTCTTCATA +
Preference number: 6 (lower is better)
Translates to: DFVVLLEDFLKQ*LGGLVVLDVFI
Trigger: TATGAAGACATCCAGGACTACGAGGCCGCCAAGGCACTGTTTGAGGAAATCCTCGAGGAGTACAACGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp TTCATGATGAGGATGCACTCACAGACTGTCTGCACTTaGTTCGGGGGCTTCGCGAATGACCTGATTTCAGTC +
Preference number: 6 (lower is better)
Translates to: FMMRMHSQTVCT*FGGFANDLISV
Trigger: GACTGAAATCAGGTCATTCGCGAAGCCCCCGAAGCAAGTGCAGACAGTCTGTGAGTGCATCCTCATCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TACTTCATGATGTTCACCAGCAGCCTGTGGATGTTTTaGGGGATCATGAGGGCTTGGTCCATGATCTGGGTG +
Preference number: 6 (lower is better)
Translates to: YFMMFTSSLWMF*GIMRAWSMIWV
Trigger: CACCCAGATCATGGACCAAGCCCTCATGATCCCCCAAAACATCCACAGGCTGCTGGTGAACATCATGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TTCTTGAGGAAGCCCTCGATACCTTCCTGCAGATACTaGACATTCAGGTTGATCCAGAGGGTCTGGGACCAT +
Preference number: 6 (lower is better)
Translates to: FLRKPSIPSCRY*TFRLIQRVWDH
Trigger: ATGGTCCCAGACCCTCTGGATCAACCTGAATGTCCAGTATCTGCAGGAAGGTATCGAGGGCTTCCTCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp ATCCTGGTTAACTGGGTCACCATATTTAGGTCTGTCTaGGGAACCACCATCTTCAGCTTCTCCCCTTGCCTC +
Preference number: 6 (lower is better)
Translates to: ILVNWVTIFRSV*GTTIFSFSPCL
Trigger: GAGGCAAGGGGAGAAGCTGAAGATGGTGGTTCCCCAGACAGACCTAAATATGGTGACCCAGTTAACCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AGTAGCCCTTTTCTAGCAACAGCTTCAGCAAAGCGATaGGCTGCTGGGTACCATACTCATCCACCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: SSPFLATASAKR*AAGYHTHPPLA
Trigger: TGCCAAAGGTGGATGAGTATGGTACCCAGCAGCCCATCGCTTTGCTGAAGCTGTTGCTAGAAAAGGGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CGTTGTACTCCTCGAGGATTTCCTCAAACAGTGCCTTaGCGGCCTCGTAGTCCTGGATGTCTTCATAAATGC +
Preference number: 6 (lower is better)
Translates to: RCTPRGFPQTVP*RPRSPGCLHKC
Trigger: GCATTTATGAAGACATCCAGGACTACGAGGCCGCCAAGGCACTGTTTGAGGAAATCCTCGAGGAGTACAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CTGTCAATCACAGGGTCGATGTACTCATCCACGTCGTaGAACAGGAAGGGGGTCCCATACTTTATGGACATC +
Preference number: 6 (lower is better)
Translates to: LSITGSMYSSTS*NRKGVPYFMDI
Trigger: GATGTCCATAAAGTATGGGACCCCCTTCCTGTTCCACGACGTGGATGAGTACATCGACCCTGTGATTGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GCTCGAGTGAATCCTGGTCGTACCACTCCTGCCACATaGGGAGATGATGTTCAATATCAAGAGGAAGGTTCC +
Preference number: 6 (lower is better)
Translates to: ARVNPGRTTPAT*GDDVQYQEEGS
Trigger: GGAACCTTCCTCTTGATATTGAACATCATCTCCCCATGTGGCAGGAGTGGTACGACCAGGATTCACTCGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CTCGAGCTGCCTGTGTGTAATAGCCAATCTCGGCATTaGAATGGAGACCAAACACTTCTGGTGTGTTGGCGA +
Preference number: 6 (lower is better)
Translates to: LELPVCNSQSRH*NGDQTLLVCWR
Trigger: TCGCCAACACACCAGAAGTGTTTGGTCTCCATTCCAATGCCGAGATTGGCTATTACACACAGGCAGCTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ATGGAAGCTTCGTCTGCTCGTAGAGGGCGCTCAGCGTaGCATTTCTCTCTCTCCAGAATTCGATTTCAGCCA +
Preference number: 6 (lower is better)
Translates to: MEASSARRGRSA*HFSLSRIRFQP
Trigger: TGGCTGAAATCGAATTCTGGAGAGAGAGAAATGCAACGCTGAGCGCCCTCTACGAGCAGACGAAGCTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GTACTTCATGATGTTCACCAGCAGCCTGTGGATGTTTaGGGGGATCATGAGGGCTTGGTCCATGATCTGGGT +
Preference number: 6 (lower is better)
Translates to: VLHDVHQQPVDV*GDHEGLVHDLG
Trigger: ACCCAGATCATGGACCAAGCCCTCATGATCCCCCAAAACATCCACAGGCTGCTGGTGAACATCATGAAGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CCGCATTGGCCAGTTCCTGCCGGTTCTTCTCGTGCTTaGCCAATTCCTTTTCAAAACTGCCTAAGAGTTCCG +
Preference number: 6 (lower is better)
Translates to: PHWPVPAGSSRA*PIPFQNCLRVP
Trigger: CGGAACTCTTAGGCAGTTTTGAAAAGGAATTGGCAAAGCACGAGAAGAACCGGCAGGAACTGGCCAATGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ATCCTCTTAAATATCCTGTCGATGTTGTCAAACTTCTaGGCCTCCTCAGGCAGCTGGGACCGTATGTCCCCC +
Preference number: 6 (lower is better)
Translates to: ILLNILSMLSNF*ASSGSWDRMSP
Trigger: GGGGGACATACGGTCCCAGCTGCCTGAGGAGGCCAAGAAGTTTGACAACATCGACAGGATATTTAAGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GTCTCCCCCATGATCCTCTTAAATATCCTGTCGATGTaGTCAAACTTCTTGGCCTCCTCAGGCAGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: VSPMILLNILSM*SNFLASSGSWD
Trigger: GTCCCAGCTGCCTGAGGAGGCCAAGAAGTTTGACAACATCGACAGGATATTTAAGAGGATCATGGGGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TGTTCCAGCGCGTCGTCAAACAGCACCAGGTTCATCTaGGTGTTGACTTCGTTGTACTCCTCGAGGATTTCC +
Preference number: 6 (lower is better)
Translates to: CSSASSNSTRFI*VLTSLYSSRIS
Trigger: GGAAATCCTCGAGGAGTACAACGAAGTCAACACCAAGATGAACCTGGTGCTGTTTGACGACGCGCTGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GAATCGAAGTCGATTTCCATCAGGGACCTCAAGAAGTaGGGGTCGGACATCATGCCCTTGGCAGTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: ESKSISIRDLKK*GSDIMPLAVFQ
Trigger: CTGGAAAACTGCCAAGGGCATGATGTCCGACCCCAACTTCTTGAGGTCCCTGATGGAAATCGACTTCGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ATGGCCTTCCCAAACACCGATGGGGAGTATCTAGGATaGGCCAGCTTGGTATTGAGGTACAGCCGGAAATTC +
Preference number: 6 (lower is better)
Translates to: MAFPNTDGEYLG*ASLVLRYSRKF
Trigger: GAATTTCCGGCTGTACCTCAATACCAAGCTGGCCAATCCTAGATACTCCCCATCGGTGTTTGGGAAGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ACCCTCCCCTCTGCCTGCTCTATCTTGATGGTCATGTaGAAGGAGAAGAGGAGCTTATGCCTCTCAAACAGC +
Preference number: 6 (lower is better)
Translates to: TLPSACSILMVM*KEKRSLCLSNS
Trigger: GCTGTTTGAGAGGCATAAGCTCCTCTTCTCCTTCAACATGACCATCAAGATAGAGCAGGCAGAGGGGAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GTCAGGATAGGCTGCACATTGGCCGTGAGCATGGACTCTGCTTCTTaGATCACCTCTAAGACCTTCCTAACAAATGGAAGCTTCGTCTGC +
Preference number: 6 (lower is better)
Translates to: VRIGCTLAVSMDSAS*ITSKTFLTNGSFVC
Trigger: GCAGACGAAGCTTCCATTTGTTAGGAAGGTCTTAGAGGTGATCAAAGAAGCAGAGTCCATGCTCACGGCCAATGTGCAGCCTATCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TCATACATCTTGATCATATGCTCTTGCACGCACAGTGGGTCACTGTaGCCCAAGATGCTGAGCAGCTCGTCGTCCGAGATGAAGAAGAAC +
Preference number: 6 (lower is better)
Translates to: SYILIICSCTHSGSL*PKMLSSSSSEMKKN
Trigger: GTTCTTCTTCATCTCGGACGACGAGCTGCTCAGCATCTTGGGCAACAGTGACCCACTGTGCGTGCAAGAGCATATGATCAAGATGTATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TCTTCCCAGCCCTGGTCCGACAGCCAGGTGCATGGTTTCTTCCACTaGCTCTTCTCCAGAGAAATGTTCCCTTTTAGGAAGAAGTCTAAC +
Preference number: 6 (lower is better)
Translates to: SSQPWSDSQVHGFFH*LFSREMFPFRKKSN
Trigger: GTTAGACTTCTTCCTAAAAGGGAACATTTCTCTGGAGAAGAGCAAGTGGAAGAAACCATGCACCTGGCTGTCGGACCAGGGCTGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CTTCCGAATCCACAGTGGGCATTGACGAGAGGCGTTTaGTACACTCATCAAACTTCACCCTTCCCTCCTCAA +
Preference number: 6 (lower is better)
Translates to: LPNPQWALTRGV*YTHQTSPFPPQ
Trigger: TTGAGGAGGGAAGGGTGAAGTTTGATGAGTGTATCAAACGCCTCTCGTCAATGCCCACTGTGGATTCGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TTCTTCTTCATCTGGGAATCCAGCGCATATGAAATCTaGCCCAGCCAGTGGATCACGCACTGCTCCAAATTC +
Preference number: 6 (lower is better)
Translates to: FFFIWESSAYEI*PSQWITHCSKF
Trigger: GAATTTGGAGCAGTGCGTGATCCACTGGCTGGGCCAGATTTCATATGCGCTGGATTCCCAGATGAAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TGCAGATACTGGACATTCAGGTTGATCCAGAGGGTCTaGGACCATTCCTCTTTGGCAAGCTTCAGAGAGTTG +
Preference number: 6 (lower is better)
Translates to: CRYWTFRLIQRV*DHSSLASFREL
Trigger: CAACTCTCTGAAGCTTGCCAAAGAGGAATGGTCCCAGACCCTCTGGATCAACCTGAATGTCCAGTATCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp ATCATACATCTTGATCATATGCTCTTGCACGCACAGTaGGTCACTGTTGCCCAAGATGCTGAGCAGCTCGTC +
Preference number: 6 (lower is better)
Translates to: IIHLDHMLLHAQ*VTVAQDAEQLV
Trigger: GACGAGCTGCTCAGCATCTTGGGCAACAGTGACCCACTGTGCGTGCAAGAGCATATGATCAAGATGTATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GGTCTCGAACATTTGGACCACTTTATCCACCTGGACTaGCAGGAGCACATAACCATTTTCCTCCAACACCTG +
Preference number: 6 (lower is better)
Translates to: GLEHLDHFIHLD*QEHITIFLQHL
Trigger: CAGGTGTTGGAGGAAAATGGTTATGTGCTCCTGCCAGTCCAGGTGGATAAAGTGGTCCAAATGTTCGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GAACGAGCTTGTTCCATGGAATCCAGTGGTTCCGCTTaGCATCGAAATGAAAGTCGTACAGGGAGGGAAGAT +
Preference number: 6 (lower is better)
Translates to: ERACSMESSGSA*HRNESRTGRED
Trigger: ATCTTCCCTCCCTGTACGACTTTCATTTCGATGCCAAGCGGAACCACTGGATTCCATGGAACAAGCTCGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp TTCAGCTTGTCCAGCCCTCCTTCCAGACGCTTGCACTaGGCTATGTTGTACTGGGTTTTCTCATCTAGTAGT +
Preference number: 6 (lower is better)
Translates to: FSLSSPPSRRLH*AMLYWVFSSSS
Trigger: ACTACTAGATGAGAAAACCCAGTACAACATAGCCCAGTGCAAGCGTCTGGAAGGAGGGCTGGACAAGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AATCGAAGTCGATTTCCATCAGGGACCTCAAGAAGTTaGGGTCGGACATCATGCCCTTGGCAGTTTTCCAGT +
Preference number: 6 (lower is better)
Translates to: NRSRFPSGTSRS*GRTSCPWQFSS
Trigger: ACTGGAAAACTGCCAAGGGCATGATGTCCGACCCCAACTTCTTGAGGTCCCTGATGGAAATCGACTTCGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GGAATGGAGACCAAACACTTCTGGTGTGTTGGCGAGTaGGAGGGCCTCAATGGCTTCGACAAATTTATCCTT +
Preference number: 6 (lower is better)
Translates to: GMETKHFWCVGE*EGLNGFDKFIL
Trigger: AAGGATAAATTTGTCGAAGCCATTGAGGCCCTCCCACTCGCCAACACACCAGAAGTGTTTGGTCTCCATTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GGCTGCACATTGGCCGTGAGCATGGACTCTGCTTCTTaGATCACCTCTAAGACCTTCCTAACAAATGGAAGC +
Preference number: 6 (lower is better)
Translates to: GCTLAVSMDSAS*ITSKTFLTNGS
Trigger: GCTTCCATTTGTTAGGAAGGTCTTAGAGGTGATCAAAGAAGCAGAGTCCATGCTCACGGCCAATGTGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TCTATGATCGCTGAGTCCTCAGCTGTGATGATATTCTaGGTGAGCAGGCTCTTCTTCATGAGGGTTGGGAGG +
Preference number: 6 (lower is better)
Translates to: SMIAESSAVMIF*VSRLFFMRVGR
Trigger: CCTCCCAACCCTCATGAAGAAGAGCCTGCTCACCAAGAATATCATCACAGCTGAGGACTCAGCGATCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CTTCTTGCCGTAGTTCTTCATGGCCTGCTTGTCCCCTaGCTTGACCTTGTTGAAGACATCTTCCACTTCCCA +
Preference number: 6 (lower is better)
Translates to: LLAVVLHGLLVP*LDLVEDIFHFP
Trigger: TGGGAAGTGGAAGATGTCTTCAACAAGGTCAAGCAAGGGGACAAGCAGGCCATGAAGAACTACGGCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ATGTCCCGGGCGTGGACATCGATGATCAGGACAGTGTaGTATTTCTTCCTGTCGTTTTTGCTCAGCTCCATG +
Preference number: 6 (lower is better)
Translates to: MSRAWTSMIRTV*YFFLSFLLSSM
Trigger: CATGGAGCTGAGCAAAAACGACAGGAAGAAATACAACACTGTCCTGATCATCGATGTCCACGCCCGGGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GAAGTGCCGGATTCACCCACAAAAAGAACAGGGTGCTaGATTTTAACCATCTGCTCCAGGATCCAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: EVPDSPTKRTGC*ILTICSRIQVV
Trigger: CACCACCTGGATCCTGGAGCAGATGGTTAAAATCAAGCACCCTGTTCTTTTTGTGGGTGAATCCGGCACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ATGGACATCTCGAGCTGCTTCAGGAAGTCGGGGTCATaGAAGGAAGCAACCCGTAGGTTATTCTTCTCCTCT +
Preference number: 6 (lower is better)
Translates to: MDISSCFRKSGS*KEATRRLFFSS
Trigger: AGAGGAGAAGAATAACCTACGGGTTGCTTCCTTCAATGACCCCGACTTCCTGAAGCAGCTCGAGATGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp AGAGCTTCTCCGCATTGGCCAGTTCCTGCCGGTTCTTCTCGTGCTTaGCCAATTCCTTTTCAAAACTGCCTAAGAGTTCCGAGCCTTTAT +
Preference number: 6 (lower is better)
Translates to: RASPHWPVPAGSSRA*PIPFQNCLRVPSLY
Trigger: ATAAAGGCTCGGAACTCTTAGGCAGTTTTGAAAAGGAATTGGCAAAGCACGAGAAGAACCGGCAGGAACTGGCCAATGCGGAGAAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TGGACATCGATGATCAGGACAGTGTTGTATTTCTTCCTGTCGTTTTaGCTCAGCTCCATGGTGATCCGCGTCACCAGGTCATCAATCTGG +
Preference number: 6 (lower is better)
Translates to: WTSMIRTVLYFFLSF*LSSMVIRVTRSSIW
Trigger: CCAGATTGATGACCTGGTGACGCGGATCACCATGGAGCTGAGCAAAAACGACAGGAAGAAATACAACACTGTCCTGATCATCGATGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp CGTGGAAGCGCAGCATGGCTATGTTATCATACATCTTaGTCATATGCTCTTGCACGCACAGTGGGTCACTGT +
Preference number: 6 (lower is better)
Translates to: RGSAAWLCYHTS*SYALARTVGHC
Trigger: ACAGTGACCCACTGTGCGTGCAAGAGCATATGATCAAGATGTATGATAACATAGCCATGCTGCGCTTCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp TCTGGATGTCCAGGGATGTGGTCCGAGAGGAGAAGTTaGCTATCAGAACAATATTGGTCTCCTCGTTCAGGT +
Preference number: 6 (lower is better)
Translates to: SGCPGMWSERRS*LSEQYWSPRSG
Trigger: ACCTGAACGAGGAGACCAATATTGTTCTGATAGTCAACTTCTCCTCTCGGACCACATCCCTGGACATCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp AAGAGGAAGGTTCCCAAAGATGTCGGAAAACTTTTGTaGCAGGAGAATGATGTCTTCCCAGCCCTGGTCCGA +
Preference number: 6 (lower is better)
Translates to: KRKVPKDVGKLL*QENDVFPALVR
Trigger: TCGGACCAGGGCTGGGAAGACATCATTCTCCTGTCACAAAAGTTTTCCGACATCTTTGGGAACCTTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp GAATCCTGGTCGTACCACTCCTGCCACATGGGGAGATaGTGTTCAATATCAAGAGGAAGGTTCCCAAAGATG +
Preference number: 6 (lower is better)
Translates to: ESWSYHSCHMGR*CSISRGRFPKM
Trigger: CATCTTTGGGAACCTTCCTCTTGATATTGAACATCATCTCCCCATGTGGCAGGAGTGGTACGACCAGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AGACCTGCAGAACATCTGAAAGGTCCTGGCAGATGTTaGCCATGTAGTCTGTTCTCTCAAACAATCGCTTCC +
Preference number: 6 (lower is better)
Translates to: RPAEHLKGPGRC*PCSLFSQTIAS
Trigger: GGAAGCGATTGTTTGAGAGAACAGACTACATGGCCAACATCTGCCAGGACCTTTCAGATGTTCTGCAGGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp ACGGGAGGGTGGTTCTTGTATAGCGGCGGGTTGTCCTaGTTCTGCACAAAGATCTTATTAACGATATCGATC +
Preference number: 6 (lower is better)
Translates to: TGGWFLYSGGLS*FCTKILLTISI
Trigger: GATCGATATCGTTAATAAGATCTTTGTGCAGAACCAGGACAACCCGCCGCTATACAAGAACCACCCTCCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp ATATTGGTCTCCTCGTTCAGGTTTTTGAGGAAGTTCTaGGTAGTGGCTGTCTTAGAAGTGCCGGATTCACCC +
Preference number: 6 (lower is better)
Translates to: ILVSSFRFLRKF*VVAVLEVPDSP
Trigger: GGGTGAATCCGGCACTTCTAAGACAGCCACTACCCAGAACTTCCTCAAAAACCTGAACGAGGAGACCAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp CACCCTCACCATCTGGGACACTGTCTGAAACCGATCTaGATTAGTAAGGACAAGGCCATTAAAAACCCTGGA +
Preference number: 6 (lower is better)
Translates to: HPHHLGHCLKPI*ISKDKAIKNPG
Trigger: TCCAGGGTTTTTAATGGCCTTGTCCTTACTAATCCAGATCGGTTTCAGACAGTGTCCCAGATGGTGAGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp GCTCCACAAGCTCCTCAAGTTTCTCATCGGGAATCATaGAGTTATCGCCTAAAAACGACTTGGCCACTGCAT +
Preference number: 6 (lower is better)
Translates to: APQAPQVSHRES*SYRLKTTWPLH
Trigger: ATGCAGTGGCCAAGTCGTTTTTAGGCGATAACTCCATGATTCCCGATGAGAAACTTGAGGAGCTTGTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CCA 72 bp AGTATAGTTGATGACCATGGCCTTCCCAAACACCGATaGGGAGTATCTAGGATTGGCCAGCTTGGTATTGAG +
Preference number: 6 (lower is better)
Translates to: SIVDDHGLPKHR*GVSRIGQLGIE
Trigger: CTCAATACCAAGCTGGCCAATCCTAGATACTCCCCATCGGTGTTTGGGAAGGCCATGGTCATCAACTATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TCGGGAAGAGAGGCGAGGTTCACACGCAGCTCCAGCTaGTTGATGATGCGTTTTACAATTTTCTTGCCATAC +
Preference number: 6 (lower is better)
Translates to: SGREARFTRSSS*LMMRFTIFLPY
Trigger: GTATGGCAAGAAAATTGTAAAACGCATCATCAACAAGCTGGAGCTGCGTGTGAACCTCGCCTCTCTTCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp ATGATCAGGACAGTGTTGTATTTCTTCCTGTCGTTTTaGCTCAGCTCCATGGTGATCCGCGTCACCAGGTCA +
Preference number: 6 (lower is better)
Translates to: MIRTVLYFFLSF*LSSMVIRVTRS
Trigger: TGACCTGGTGACGCGGATCACCATGGAGCTGAGCAAAAACGACAGGAAGAAATACAACACTGTCCTGATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp CCATACTTTATGGACATCTCGAGCTGCTTCAGGAAGTCGGGGTCATaGAAGGAAGCAACCCGTAGGTTATTCTTCTCCTCTTTTCGTTTG +
Preference number: 6 (lower is better)
Translates to: PYFMDISSCFRKSGS*KEATRRLFFSSFRL
Trigger: CAAACGAAAAGAGGAGAAGAATAACCTACGGGTTGCTTCCTTCAATGACCCCGACTTCCTGAAGCAGCTCGAGATGTCCATAAAGTATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp TACAACTTTGTCATTATCCCAAGCTTTGTCTGGGCCTaGCACAGAGTATTGATGACTACGGACTTGCCCCCT +
Preference number: 6 (lower is better)
Translates to: YNFVIIPSFVWA*HRVLMTTDLPP
Trigger: AGGGGGCAAGTCCGTAGTCATCAATACTCTGTGTCAGGCCCAGACAAAGCTTGGGATAATGACAAAGTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GGGTGGTTCTTGTATAGCGGCGGGTTGTCCTGGTTCTaGACAAAGATCTTATTAACGATATCGATCTCCTTG +
Preference number: 6 (lower is better)
Translates to: GWFLYSGGLSWF*TKILLTISISL
Trigger: CAAGGAGATCGATATCGTTAATAAGATCTTTGTGCAGAACCAGGACAACCCGCCGCTATACAAGAACCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058440.12
CDS GCA 72 bp TTAGAAGTGCCGGATTCACCCACAAAAAGAACAGGGTaGTTGATTTTAACCATCTGCTCCAGGATCCAGGTG +
Preference number: 6 (lower is better)
Translates to: LEVPDSPTKRTG*LILTICSRIQV
Trigger: CACCTGGATCCTGGAGCAGATGGTTAAAATCAAGCACCCTGTTCTTTTTGTGGGTGAATCCGGCACTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GGAAGAGAGGCGAGGTTCACACGCAGCTCCAGCTTGTaGATGATGCGTTTTACAATTTTCTTGCCATACAGT +
Preference number: 6 (lower is better)
Translates to: GREARFTRSSSL*MMRFTIFLPYS
Trigger: ACTGTATGGCAAGAAAATTGTAAAACGCATCATCAACAAGCTGGAGCTGCGTGTGAACCTCGCCTCTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TTGGACCTGATCTCTGAAATTGTTGCGAGGACAAACTaGAGGTCTTCAAGGGTGCTGGGGCTCTTCTTAAGA +
Preference number: 6 (lower is better)
Translates to: LDLISEIVARTN*RSSRVLGLFLR
Trigger: TCTTAAGAAGAGCCCCAGCACCCTTGAAGACCTCAAGTTTGTCCTCGCAACAATTTCAGAGATCAGGTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp ACTAAAGATTTGGACCTGATCTCTGAAATTGTTGCGAGGACAAACTaGAGGTCTTCAAGGGTGCTGGGGCTCTTCTTAAGATTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: TKDLDLISEIVARTN*RSSRVLGLFLRFLA
Trigger: GGCCAAGAATCTTAAGAAGAGCCCCAGCACCCTTGAAGACCTCAAGTTTGTCCTCGCAACAATTTCAGAGATCAGGTCCAAATCTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TATCGCTCCTGGATGTCCTTGTACCTCAGCTCCATGACTAAAGATTaGGACCTGATCTCTGAAATTGTTGCGAGGACAAACTTGAGGTCT +
Preference number: 6 (lower is better)
Translates to: YRSWMSLYLSSMTKD*DLISEIVARTNLRS
Trigger: AGACCTCAAGTTTGTCCTCGCAACAATTTCAGAGATCAGGTCCAAATCTTTAGTCATGGAGCTGAGGTACAAGGACATCCAGGAGCGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp TTCAGAGTCTTTAGGAGGCCTTTGATGTTCTTCACTTaGCCCTGGGTGATGGAATCGAAGTCGATTTCCATC +
Preference number: 6 (lower is better)
Translates to: FRVFRRPLMFFT*PWVMESKSISI
Trigger: GATGGAAATCGACTTCGATTCCATCACCCAGGGTCAAGTGAAGAACATCAAAGGCCTCCTAAAGACTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp ATGGCTATGTTATCATACATCTTGATCATATGCTCTTaGACGCACAGTGGGTCACTGTTGCCCAAGATGCTG +
Preference number: 6 (lower is better)
Translates to: MAMLSYILIICS*THSGSLLPKML
Trigger: CAGCATCTTGGGCAACAGTGACCCACTGTGCGTGCAAGAGCATATGATCAAGATGTATGATAACATAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS GCA 72 bp GGGTGGTTCTTGTATAGCGGCGGGTTGTCCTGGTTCTaGACAAAGATCTTATTAACGATATCGATCAGAACT +
Preference number: 6 (lower is better)
Translates to: GWFLYSGGLSWF*TKILLTISIRT
Trigger: AGTTCTGATCGATATCGTTAATAAGATCTTTGTGCAGAACCAGGACAACCCGCCGCTATACAAGAACCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000141137.7
CDS CCA 72 bp TTCAAGCTTGAAGTCCTCCATCACGTATTTCCAGTATaGGGAGGATCTGATGCTGAATGGATCAAAGCTCAG +
Preference number: 6 (lower is better)
Translates to: FKLEVLHHVFPV*GGSDAEWIKAQ
Trigger: CTGAGCTTTGATCCATTCAGCATCAGATCCTCCCCATACTGGAAATACGTGATGGAGGACTTCAAGCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp CATGGCTATGTTATCATACATCTTGATCATATGCTCTaGCACGCACAGTGGGTCACTGTTGCCCAAGATGCT +
Preference number: 6 (lower is better)
Translates to: HGYVIIHLDHML*HAQWVTVAQDA
Trigger: AGCATCTTGGGCAACAGTGACCCACTGTGCGTGCAAGAGCATATGATCAAGATGTATGATAACATAGCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp GTGGTCCGAGAGGAGAAGTTGACTATCAGAACAATATaGGTCTCCTCGTTCAGGTTTTTGAGGAAGTTCTGG +
Preference number: 6 (lower is better)
Translates to: VVREEKLTIRTI*VSSFRFLRKFW
Trigger: CCAGAACTTCCTCAAAAACCTGAACGAGGAGACCAATATTGTTCTGATAGTCAACTTCTCCTCTCGGACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp GAGAAGTTGACTATCAGAACAATATTGGTCTCCTCGTTCAGGTTTTaGAGGAAGTTCTGGGTAGTGGCTGTCTTAGAAGTGCCGGATTCA +
Preference number: 6 (lower is better)
Translates to: EKLTIRTILVSSFRF*RKFWVVAVLEVPDS
Trigger: TGAATCCGGCACTTCTAAGACAGCCACTACCCAGAACTTCCTCAAAAACCTGAACGAGGAGACCAATATTGTTCTGATAGTCAACTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS TCA 72 bp TTAGGATTTCCATACAGACCTGGAAGTCAGACTCATTaGAGTCATAGTACACGTTCCAGCCGATCTTGCCAA +
Preference number: 6 (lower is better)
Translates to: LGFPYRPGSQTH*SHSTRSSRSCQ
Trigger: TTGGCAAGATCGGCTGGAACGTGTACTATGACTTCAATGAGTCTGACTTCCAGGTCTGTATGGAAATCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 90 bp TTCTGCACAAAGATCTTATTAACGATATCGATCAGAACTTCAAGCTaGAAGTCCTCCATCACGTATTTCCAGTATGGGGAGGATCTGATG +
Preference number: 6 (lower is better)
Translates to: FCTKILLTISIRTSS*KSSITYFQYGEDLM
Trigger: CATCAGATCCTCCCCATACTGGAAATACGTGATGGAGGACTTCAAGCTTGAAGTTCTGATCGATATCGTTAATAAGATCTTTGTGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141137.7
CDS CAA 90 bp AAGTACTTGGTTTCATTAATAATCTCTTTAAGAACGGGAGAGAAGTaGATAATAAACGTGGTCCCCCTGTCTATGATCGCTGAGTCCTCA +
Preference number: 6 (lower is better)
Translates to: KYLVSLIISLRTGEK*IINVVPLSMIAESS
Trigger: TGAGGACTCAGCGATCATAGACAGGGGGACCACGTTTATTATCAACTTCTCTCCCGTTCTTAAAGAGATTATTAATGAAACCAAGTACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp AAGATCTTATTAACGATATCGATCAGAACTTCAAGCTaGAAGTCCTCCATCACGTATTTCCAGTATGGGGAG +
Preference number: 6 (lower is better)
Translates to: KILLTISIRTSS*KSSITYFQYGE
Trigger: CTCCCCATACTGGAAATACGTGATGGAGGACTTCAAGCTTGAAGTTCTGATCGATATCGTTAATAAGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000141137.7
CDS GCA 72 bp GATCTTATTAACGATATCGATCTCCTTGTAGTACTGTaGCAGGATGTCATTAAACTTCATCATCATCTGACG +
Preference number: 6 (lower is better)
Translates to: DLINDIDLLVVL*QDVIKLHHHLT
Trigger: CGTCAGATGATGATGAAGTTTAATGACATCCTGGCACAGTACTACAAGGAGATCGATATCGTTAATAAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000058440.12
CDS CAA 72 bp GTTTCATTAATAATCTCTTTAAGAACGGGAGAGAAGTaGATAATAAACGTGGTCCCCCTGTCTATGATCGCT +
Preference number: 6 (lower is better)
Translates to: VSLIISLRTGEK*IINVVPLSMIA
Trigger: AGCGATCATAGACAGGGGGACCACGTTTATTATCAACTTCTCTCCCGTTCTTAAAGAGATTATTAATGAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7
CDS CAA 72 bp TTCTCGAAGAGGTCATTTAAATACTTTTGCTCCACCTaGTTTTGTATCTGTTGTAGCCATTTCTTCCAGTAT +
Preference number: 6 (lower is better)
Translates to: FSKRSFKYFCST*FCICCSHFFQY
Trigger: ATACTGGAAGAAATGGCTACAACAGATACAAAACAAGGTGGAGCAAAAGTATTTAAATGACCTCTTCGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058440.12
ENSMUST00000141137.7