Pregenerated sensors for DNAAF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020973Ensembl transcript IDs: ENSMUST00000021356.6
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTGTGCTAGCTAGGCATTaGGATTGCTGCCAGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCVLARH*DCCQLP Trigger: AGGAAGCTGGCAGCAATCCCAATGCCTAGCTAGCAC...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| 3UTR-3UTR GCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGAGGCATTGGGATTGCTaGCAGCTTCCTCACCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: DDLGLIPETQSSAFHMHVRHWDC*QLPHQN Trigger: ATTTTGGTGAGGAAGCTGGCAGCAATCCCAATGCCT...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| 3UTR-3UTR CAA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGCATCTCCACATCTCCTaGACCCCAAATAAATGTTTT | + |
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Preference number: 3 (lower is better) Translates to: DDLGLIPETQSSAFHMHVHLHIS*TPNKCF Trigger: AAAACATTTATTTGGGGTCAAGGAGATGTGGAGATG...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTCGCGGAAGCGCTCGTaGCTCCGGGCCAGCGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCSRKRS*LRASAS Trigger: GCTGGCGCTGGCCCGGAGCCACGAGCGCTTCCGCGA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTCAAGTCCTCCAGCGCTaGGGAGGCCGCCGCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCQVLQR*GGRRLG Trigger: GCCAAGGCGGCGGCCTCCTCAGCGCTGGAGGACTTG...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTGGGCGTGCGGAGCACTaGGGCCTCGGGCATCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCGRAEH*GLGHPL Trigger: AAGGGGATGCCCGAGGCCGCAGTGCTCCGCACGCCC...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTCGGGAAAAGCCCTGGTaGCTCCCCCTCGGGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCREKPW*LPLGLG Trigger: GCCCAGCCCGAGGGGGAGCCACCAGGGCTTTTCCCG...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGCCCGCTCCAGGGCTGTaGTCTCCTCCTCGTAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVPAPGL*SPPRSA Trigger: GGCGCTACGAGGAGGAGATCACAGCCCTGGAGCGGG...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGCTGACGCCGAACTGCTaGTCCACCGCCTCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVLTPNC*STASRA Trigger: GGCCCTGGAGGCGGTGGAGCAGCAGTTCGGCGTCAG...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGGCTCCCCGTCCAGGCTaGTACGCAGCACATGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVAPRPG*YAAHGP Trigger: CGGGCCATGTGCTGCGTACCAGCCTGGACGGGGAGC...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTCCGCCTCCAGGGCCGTaGCGTCCAGCATTTCGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCPPPGP*RPAFRG Trigger: TCCGCGAAATGCTGGACGCCACGGCCCTGGAGGCGG...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTGTCCGGGAAAAGCCCTaGTGGCTCCCCCTCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCVREKP*WLPLGL Trigger: CAGCCCGAGGGGGAGCCACCAGGGCTTTTCCCGGAC...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTCCTGCGGTCCAGCCTaGCGCCGAACTGCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCSCGPA*RRTAAP Trigger: TGGAGCAGCAGTTCGGCGTCAGGCTGGACCGCAGGA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGTGGCCCGGCTCAGGGTaGACGAACCGCACATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVWPGSG*TNRTST Trigger: GGTGGATGTGCGGTTCGTGCACCCTGAGCCGGGCCA...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGCCTGAAAGGCGGAGGTaGACCGCTGCACCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVPERRR*TAAPPL Trigger: GAGAGGAGGTGCAGCGGTTCACCTCCGCCTTTCAGG...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTCGGAACTCTGGGTCCTaGAAGGCGGAGGTGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCRNSGS*KAEVNR Trigger: GCGGTTCACCTCCGCCTTTCAGGACCCAGAGTTCCG...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTCGCCTTGTTGTACTGTaGCTTGCCGCGGCCGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCRLVVL*LAAAVV Trigger: GACGACGGCCGCGGCAAGGCACAGTACAACAAGGCG...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTAGCTCCGGTTCCATCTaGAGACTCTTCCCGCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCSSGSI*RLFPRR Trigger: GCGGCGCGGGAAGAGTCTGCAGATGGAACCGGAGCT...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTGGAGGTCTACGTGGTaGCGCTGCACCACGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCWRSTW*RCTTEQ Trigger: CTGCTCCGTGGTGCAGCGCCACCACGTAGACCTCCA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTCCTGGAGGTCTACGTaGTGGCGCTGCACCACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCSWRST*WRCTTE Trigger: CTCCGTGGTGCAGCGCCACCACGTAGACCTCCAGGA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGGCGGAGGTGAACCGCTaGACCTCCTCTCTGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVAEVNR*TSSLLR Trigger: TCTGAGCAGAGAGGAGGTGCAGCGGTTCACCTCCGC...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTAAGCAGCTGGAGAGGTaGCGGACTGGTCAGCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCKQLER*RTGQRL Trigger: AAGCCGCTGACCAGTCCGCCACCTCTCCAGCTGCTT...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGTGGGGCCAGAGACCTTaGCTGCTTCAATGGGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVWGQRP*LLQWGA Trigger: TGCTCCCCATTGAAGCAGGCAAGGTCTCTGGCCCCA...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTCATTCGGCGGAACTCTaGGTCCTGAAAGGCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCHSAEL*VLKGGG Trigger: ACCTCCGCCTTTCAGGACCCAGAGTTCCGCCGAATG...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGAACCTCAATCAGCGGTaGGGCCAGAGACCTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVNLNQR*GQRPCL Trigger: CAGGCAAGGTCTCTGGCCCCACCGCTGATTGAGGTT...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGGCCAGAGACCTTGCCTaGTTCAATGGGGAGCAAAGG | + |
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Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVARDLA*FNGEQR Trigger: CCTTTGCTCCCCATTGAAGCAGGCAAGGTCTCTGGC...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGGCATCCCCTTGTACTTaGTCTTCAGGGTCTTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVASPCT*SSGSWR Trigger: ACGCCAAGACCCTGAAGATCAAGTACAAGGGGATGC...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGTTCGACTGCTGCAGCTaGATCAGAAGCAGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVFDCCS*IRSSWR Trigger: TCTCCAGCTGCTTCTGATTCAGCTGCAGCAGTCGAA...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTCTCGCCAAAGTCCGTaGCTCTCTGGAGATTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCSRQSP*LSGDFA Trigger: GGCAAAATCTCCAGAGAGCCACGGACTTTGGCGAGA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGCCTTGCCTGCTTCAATaGGGAGCAAAGGACCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVPCLLQ*GAKDLF Trigger: GAAGAGGTCCTTTGCTCCCCATTGAAGCAGGCAAGG...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTCCCAGGCACTTGGATaGGCAAAGTCAAGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCSQALG*AKSRSL Trigger: AAGACTCCTTGACTTTGCTCATCCAAGTGCCTGGGA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTCCTTTTCCCTTTCCTTaGAGCCCAGCAGGATCACTA | + |
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Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCPFPFP*SPAGSL Trigger: TAGTGATCCTGCTGGGCTTCAAGGAAAGGGAAAAGG...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGTCCGTGAAGAGTTTGTaGCAGAATCCCAGGCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVSVKSL*QNPRHL Trigger: CAAGTGCCTGGGATTCTGCCACAAACTCTTCACGGA...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTAAGGAGTCTTCGTCCTaGTTACACTGTAAAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCKESSS*LHCKGG Trigger: CCCTCCTTTACAGTGTAATCAGGACGAAGACTCCTT...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTAGAATCCCAGGCACTTaGATGAGCAAAGTCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCRIPGT*MSKVKE Trigger: CTCCTTGACTTTGCTCATCCAAGTGCCTGGGATTCT...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTGAACCTGCTCATCAGTaGCCTGAAGAACCTCAATCA | + |
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Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCEPAHQ*PEEPQS Trigger: TGATTGAGGTTCTTCAGGCCACTGATGAGCAGGTTC...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGAAGTCCGTGGCTCTCTaGAGATTTTGCCAGTACTAT | + |
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Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVKSVAL*RFCQYY Trigger: ATAGTACTGGCAAAATCTCCAGAGAGCCACGGACTT...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTATCCATTTTTGCCTCTaGTTGCAGCGGTTTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCIHFCL*LQRFSR Trigger: TCTGGAAAACCGCTGCAACCAGAGGCAAAAATGGAT...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTAGGGATTCTGAAAACTaGATGCACAATGAGTCGTGT | + |
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Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCRDSEN*MHNESC Trigger: ACACGACTCATTGTGCATTCAGTTTTCAGAATCCCT...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGAAACTGAATGCACAATaGGTCGTGTGGTCTCTAATA | + |
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Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVKLNAQ*VVWSLI Trigger: TATTAGAGACCACACGACTCATTGTGCATTCAGTTT...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTCCACAGCTGAACCATaGGTGTTTATTTTTAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCSTAEP*VFIFSA Trigger: AGCACTAAAAATAAACACGCATGGTTCAGCTGTGGA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGTGGTCTCTAATAATCTaGACACTACCATCCTGCATA | + |
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Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVWSLII*TLPSCI Trigger: TATGCAGGATGGTAGTGTGCAGATTATTAGAGACCA...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGATTCTGAAAACTGAATaGACAATGAGTCGTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVILKTE*TMSRVV Trigger: GACCACACGACTCATTGTGCATTCAGTTTTCAGAAT...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CCA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGACTCAACTTATTCTCTaGAGCAAACTGCAAAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: DDLGLIPETQSSAFHMHVTQLIL*SKLQSA Trigger: TGCACTTTGCAGTTTGCTCCAGAGAATAAGTTGAGT...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR TCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTAAGTCAGGTATGTTTTaGACCACAGTTTTGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCKSGMF*TTVLFS Trigger: ACTGAACAAAACTGTGGTTCAAAACATACCTGACTT...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR GCA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTGCACACTACCATCCTaGATATTCGTCTCTTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCCTLPS*IFVSFI Trigger: TATAAAAGAGACGAATATGCAGGATGGTAGTGTGCA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 90 bp | GCGGCCGGGAGCCAGGCTATAGGGCAGGGACCAGTGGCTGCCAGCTaGCGTGCCGCCGCGCCCCGGGCCGGGCCGGCTGCTAGGTACGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAGSQAIGQGPVAAS*RAAAPRAGPAARYA Trigger: GGCGTACCTAGCAGCCGGCCCGGCCCGGGGCGCGGCGGCACGGCAGCTGGCAGCCACTGGTCCCTGCCCTATAGCCTGGCTCCCGGCCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 90 bp | TACGTGGTGGCGCTGCACCACGGAGCAGCGCGGCTCCGTGGGCTCTaGGCGCTGCACGGCCTCGGGAGCGGGGGACGCGGGCGAGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: YVVALHHGAARLRGL*ALHGLGSGGRGRAG Trigger: GCCCGCTCGCCCGCGTCCCCCGCTCCCGAGGCCGTGCAGCGCCCAGAGCCCACGGAGCCGCGCTGCTCCGTGGTGCAGCGCCACCACGTA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 90 bp | TGGCGCTGCACCACGGAGCAGCGCGGCTCCGTGGGCTCTGGGCGCTaGACGGCCTCGGGAGCGGGGGACGCGGGCGAGCGGGCAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WRCTTEQRGSVGSGR*TASGAGDAGERAVF Trigger: GAACACTGCCCGCTCGCCCGCGTCCCCCGCTCCCGAGGCCGTGCAGCGCCCAGAGCCCACGGAGCCGCGCTGCTCCGTGGTGCAGCGCCA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 90 bp | GGAGGTCTACGTGGTGGCGCTGCACCACGGAGCAGCGCGGCTCCGTaGGCTCTGGGCGCTGCACGGCCTCGGGAGCGGGGGACGCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GGLRGGAAPRSSAAP*ALGAARPRERGTRA Trigger: CGCCCGCGTCCCCCGCTCCCGAGGCCGTGCAGCGCCCAGAGCCCACGGAGCCGCGCTGCTCCGTGGTGCAGCGCCACCACGTAGACCTCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 90 bp | CCGGTCTCCTCCGCGGGCTCTTCCGGTGTCGCGGCCGGGGGTTCCTaGCGCGCGTCGGCCAGCGCCACCGGCAGCGTGACCACCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PVSSAGSSGVAAGGS*RASASATGSVTTSC Trigger: GCAGCTGGTGGTCACGCTGCCGGTGGCGCTGGCCGACGCGCGCCAGGAACCCCCGGCCGCGACACCGGAAGAGCCCGCGGAGGAGACCGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS TCA 90 bp | CGGCCGGGGGTTCCTGGCGCGCGTCGGCCAGCGCCACCGGCAGCGTaGCCACCAGCTGCCGCCGCGCCTTGTTGTACTGTGCCTTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPGVPGARRPAPPAA*PPAAAAPCCTVPCR Trigger: GCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACGCTGCCGGTGGCGCTGGCCGACGCGCGCCAGGAACCCCCGGCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 90 bp | TCCTGGCGCGCGTCGGCCAGCGCCACCGGCAGCGTGACCACCAGCTaGCGCCGCGCCTTGTTGTACTGTGCCTTGCCGCGGCCGTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWRASASATGSVTTS*RRALLYCALPRPSS Trigger: GGACGACGGCCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACGCTGCCGGTGGCGCTGGCCGACGCGCGCCAGGA 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS TCA 90 bp | GCCGCCGCGCCCCGGGCCGGGCCGGCTGCTAGGTACGCCTACCAGTaGGTTGCTGCACACGTTCACGTAGCAGCGGTGCTCCCCGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAAPRAGPAARYAYQ*VAAHVHVAAVLPVQ Trigger: CTGGACGGGGAGCACCGCTGCTACGTGAACGTGTGCAGCAACTCACTGGTAGGCGTACCTAGCAGCCGGCCCGGCCCGGGGCGCGGCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 90 bp | CACCGGCAGCGTGACCACCAGCTGCCGCCGCGCCTTGTTGTACTGTaGCTTGCCGCGGCCGTCGTCCACCGGGTACGGCAGCGAGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: HRQRDHQLPPRLVVL*LAAAVVHRVRQREP Trigger: CGGCTCTCGCTGCCGTACCCGGTGGACGACGGCCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACGCTGCCGGTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 90 bp | ACCGCCTCCAGGGCCGTGGCGTCCAGCATTTCGCGGAAGCGCTCGTaGCTCCGGGCCAGCGCCAGCGCTTCGGGGTGGAAGACCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: TASRAVASSISRKRS*LRASASASGWKTTS Trigger: CGACGTGGTCTTCCACCCCGAAGCGCTGGCGCTGGCCCGGAGCCACGAGCGCTTCCGCGAAATGCTGGACGCCACGGCCCTGGAGGCGGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 90 bp | TGCTCCCCGTCCAGGCTGGTACGCAGCACATGGCCCGGCTCAGGGTaGACGAACCGCACATCCACCCCACGCTCCCGCTCCAGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSPSRLVRSTWPGSG*TNRTSTPRSRSRAV Trigger: CACAGCCCTGGAGCGGGAGCGTGGGGTGGATGTGCGGTTCGTGCACCCTGAGCCGGGCCATGTGCTGCGTACCAGCCTGGACGGGGAGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 90 bp | CTTCGGGGTGGAAGACCACGTCGTAGACGGTGTAGCGGGCGCCGTTaGGGCCGGCATACTGGCGGCCGGGAGCCAGGCTATAGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRGGRPRRRRCSGRR*GRHTGGREPGYRAG Trigger: CCCTGCCCTATAGCCTGGCTCCCGGCCGCCAGTATGCCGGCCGCAACGGCGCCCGCTACACCGTCTACGACGTGGTCTTCCACCCCGAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 90 bp | AGTTGCTGCACACGTTCACGTAGCAGCGGTGCTCCCCGTCCAGGCTaGTACGCAGCACATGGCCCGGCTCAGGGTGCACGAACCGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: SCCTRSRSSGAPRPG*YAAHGPAQGARTAH Trigger: ATGTGCGGTTCGTGCACCCTGAGCCGGGCCATGTGCTGCGTACCAGCCTGGACGGGGAGCACCGCTGCTACGTGAACGTGTGCAGCAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 90 bp | GTCCGTGATCTCCGCGGCGTACTCGGAGAACATTCGGCGGAACTCTaGGTCCTGAAAGGCGGAGGTGAACCGCTGCACCTCCTCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRDLRGVLGEHSAEL*VLKGGGEPLHLLSA Trigger: AGCAGAGAGGAGGTGCAGCGGTTCACCTCCGCCTTTCAGGACCCAGAGTTCCGCCGAATGTTCTCCGAGTACGCCGCGGAGATCACGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS TCA 90 bp | ATCTCCGCGGCGTACTCGGAGAACATTCGGCGGAACTCTGGGTCCTaGAAGGCGGAGGTGAACCGCTGCACCTCCTCTCTGCTCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: ISAAYSENIRRNSGS*KAEVNRCTSSLLRS Trigger: GGATCTGAGCAGAGAGGAGGTGCAGCGGTTCACCTCCGCCTTTCAGGACCCAGAGTTCCGCCGAATGTTCTCCGAGTACGCCGCGGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 90 bp | AGTCTTCGTCCTGATTACACTGTAAAGGAGGGCACACGGGTGCGATaGTCTCGGTTCCGGGGTCACCCATGGCTGAGCCCGCGGTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SLRPDYTVKEGTRVR*SRFRGHPWLSPRCR Trigger: ACGACACCGCGGGCTCAGCCATGGGTGACCCCGGAACCGAGAGCATCGCACCCGTGTGCCCTCCTTTACAGTGTAATCAGGACGAAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS TCA 90 bp | ACTCGGAGAACATTCGGCGGAACTCTGGGTCCTGAAAGGCGGAGGTaGACCGCTGCACCTCCTCTCTGCTCAGATCCAAGTCCTCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TRRTFGGTLGPERRR*TAAPPLCSDPSPPA Trigger: CGCTGGAGGACTTGGATCTGAGCAGAGAGGAGGTGCAGCGGTTCACCTCCGCCTTTCAGGACCCAGAGTTCCGCCGAATGTTCTCCGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTGCCGCCGCGCCTTGTaGTACTGTGCCTTGCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCCRRAL*YCALPR Trigger: CCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 90 bp | GATCTGAACCTGCTCATCAGTGGCCTGAAGAACCTCAATCAGCGGTaGGGCCAGAGACCTTGCCTGCTTCAATGGGGAGCAAAGGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: DLNLLISGLKNLNQR*GQRPCLLQWGAKDL Trigger: GAGGTCCTTTGCTCCCCATTGAAGCAGGCAAGGTCTCTGGCCCCACCGCTGATTGAGGTTCTTCAGGCCACTGATGAGCAGGTTCAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS-3UTR CAA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGAGCTGCCGCCGCGCCTaGTTGTACTGTGCCTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: DDLGLIPETQSSAFHMHVSCRRA*LYCALP Trigger: CGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCT...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 90 bp | CACTACATTCCTGCAACTCTGCATGGATCTGAACCTGCTCATCAGTaGCCTGAAGAACCTCAATCAGCGGTGGGGCCAGAGACCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HYIPATLHGSEPAHQ*PEEPQSAVGPETLP Trigger: AGGCAAGGTCTCTGGCCCCACCGCTGATTGAGGTTCTTCAGGCCACTGATGAGCAGGTTCAGATCCATGCAGAGTTGCAGGAATGTAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 90 bp | ATCAGTGGCCTGAAGAACCTCAATCAGCGGTGGGGCCAGAGACCTTaGCTGCTTCAATGGGGAGCAAAGGACCTCTTCAAGAAACCCATT | + |
|
Preference number: 5 (lower is better) Translates to: ISGLKNLNQRWGQRP*LLQWGAKDLFKKPI Trigger: AATGGGTTTCTTGAAGAGGTCCTTTGCTCCCCATTGAAGCAGGCAAGGTCTCTGGCCCCACCGCTGATTGAGGTTCTTCAGGCCACTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS-3UTR CAA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTTGATCTTCAGGGTCTaGGCGTTCCTGCGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCLIFRV*AFLRSS Trigger: GCTGGACCGCAGGAACGCCAAGACCCTGAAGATCAA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CAA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTATGTCCGTGAAGAGTTaGTGGCAGAATCCCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCMSVKS*WQNPRH Trigger: GTGCCTGGGATTCTGCCACAAACTCTTCACGGACAT...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS GCA 90 bp | TCCCTTTCCTTGAAGCCCAGCAGGATCACTACATTCCTGCAACTCTaGATGGATCTGAACCTGCTCATCAGTGGCCTGAAGAACCTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLKPSRITTFLQL*MDLNLLISGLKNLN Trigger: ATTGAGGTTCTTCAGGCCACTGATGAGCAGGTTCAGATCCATGCAGAGTTGCAGGAATGTAGTGATCCTGCTGGGCTTCAAGGAAAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CAA 90 bp | GATGACCTGGGCTTAATCCCAGAGACACAGTCTTCTGCCTTCCATATGCATGTGCAGAATCCCAGGCACTaGGATGAGCAAAGTCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DDLGLIPETQSSAFHMHVQNPRH*DEQSQG Trigger: TCCTTGACTTTGCTCATCCAAGTGCCTGGGATTCTG...CACATGCATATGGAAGGCAGAAGACTGTGTCTCTGGGATTAAGCCCAGGTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CAA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTTCCTTTTCCCTTTCCTaGAAGCCCAGCAGGATCACT | + |
|
Preference number: 5 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCSFSLS*KPSRIT Trigger: AGTGATCCTGCTGGGCTTCAAGGAAAGGGAAAAGGA...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS-3UTR CAA 90 bp | CCTGGTCTACAAAGTGAGGTTCAGGACAGCCAAGGCTACACAGAAAAACCCTGTACTCAGGATCCATTTTaGCCTCTGGTTGCAGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PGLQSEVQDSQGYTEKPCTQDPF*PLVAAV Trigger: AACCGCTGCAACCAGAGGCAAAAATGGATCCTGAGT...ACAGGGTTTTTCTGTGTAGCCTTGGCTGTCCTGAACCTCACTTTGTAGACCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 90 bp | AAGAACCTCAATCAGCGGTGGGGCCAGAGACCTTGCCTGCTTCAATaGGGAGCAAAGGACCTCTTCAAGAAACCCATTAACATTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KNLNQRWGQRPCLLQ*GAKDLFKKPINIFF Trigger: GAAGAAAATGTTAATGGGTTTCTTGAAGAGGTCCTTTGCTCCCCATTGAAGCAGGCAAGGTCTCTGGCCCCACCGCTGATTGAGGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS TCA 90 bp | TTAGATGTCCGTGAAGAGTTTGTGGCAGAATCCCAGGCACTTGGATaGGCAAAGTCAAGGAGTCTTCGTCCTGATTACACTGTAAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LDVREEFVAESQALG*AKSRSLRPDYTVKE Trigger: CTCCTTTACAGTGTAATCAGGACGAAGACTCCTTGACTTTGCTCATCCAAGTGCCTGGGATTCTGCCACAAACTCTTCACGGACATCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CCA 90 bp | GGTAGTACTACTTTCTCTTATAAACTCAGGATCCATTTTTGCCTCTaGTTGCAGCGGTTTTCCAGACAGTACGTGAGGAACCTCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GSTTFSYKLRIHFCL*LQRFSRQYVRNLRT Trigger: TGTCCTGAGGTTCCTCACGTACTGTCTGGAAAACCGCTGCAACCAGAGGCAAAAATGGATCCTGAGTTTATAAGAGAAAGTAGTACTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 90 bp | AAAGACTCCTTGTTCAAGCCACAATACCACTCTCGCCAAAGTCCGTaGCTCTCTGGAGATTTTGCCAGTACTATGACTGCATTATTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: KDSLFKPQYHSRQSP*LSGDFASTMTALFK Trigger: TTTAAATAATGCAGTCATAGTACTGGCAAAATCTCCAGAGAGCCACGGACTTTGGCGAGAGTGGTATTGTGGCTTGAACAAGGAGTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 72 bp | CGTGGTGGCGCTGCACCACGGAGCAGCGCGGCTCCGTaGGCTCTGGGCGCTGCACGGCCTCGGGAGCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGGAAPRSSAAP*ALGAARPRERG Trigger: CCCCCGCTCCCGAGGCCGTGCAGCGCCCAGAGCCCACGGAGCCGCGCTGCTCCGTGGTGCAGCGCCACCACG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 72 bp | GCGTCGGCCAGCGCCACCGGCAGCGTGACCACCAGCTaGCGCCGCGCCTTGTTGTACTGTGCCTTGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ASASATGSVTTS*RRALLYCALPR Trigger: CCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACGCTGCCGGTGGCGCTGGCCGACGC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CAA 90 bp | GCCAGCGCCACCGGCAGCGTGACCACCAGCTGCCGCCGCGCCTTGTaGTACTGTGCCTTGCCGCGGCCGTCGTCCACCGGGTACGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASATGSVTTSCRRAL*YCALPRPSSTGYGS Trigger: GCTGCCGTACCCGGTGGACGACGGCCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACGCTGCCGGTGGCGCTGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CAA 90 bp | TCGGCCAGCGCCACCGGCAGCGTGACCACCAGCTGCCGCCGCGCCTaGTTGTACTGTGCCTTGCCGCGGCCGTCGTCCACCGGGTACGGC | + |
|
Preference number: 6 (lower is better) Translates to: SASATGSVTTSCRRA*LYCALPRPSSTGYG Trigger: GCCGTACCCGGTGGACGACGGCCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACGCTGCCGGTGGCGCTGGCCGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CAA 90 bp | GGCAGCGTGACCACCAGCTGCCGCCGCGCCTTGTTGTACTGTGCCTaGCCGCGGCCGTCGTCCACCGGGTACGGCAGCGAGAGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSVTTSCRRALLYCA*PRPSSTGYGSESRS Trigger: GCTGCGGCTCTCGCTGCCGTACCCGGTGGACGACGGCCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACGCTGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS TCA 72 bp | GTTCCTGGCGCGCGTCGGCCAGCGCCACCGGCAGCGTaGCCACCAGCTGCCGCCGCGCCTTGTTGTACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VPGARRPAPPAA*PPAAAAPCCTV Trigger: CACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACGCTGCCGGTGGCGCTGGCCGACGCGCGCCAGGAAC 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 72 bp | AGGGCCGTGGCGTCCAGCATTTCGCGGAAGCGCTCGTaGCTCCGGGCCAGCGCCAGCGCTTCGGGGTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RAVASSISRKRS*LRASASASGWK Trigger: CTTCCACCCCGAAGCGCTGGCGCTGGCCCGGAGCCACGAGCGCTTCCGCGAAATGCTGGACGCCACGGCCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CAA 72 bp | ACCGGCAGCGTGACCACCAGCTGCCGCCGCGCCTTGTaGTACTGTGCCTTGCCGCGGCCGTCGTCCACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TGSVTTSCRRAL*YCALPRPSSTG Trigger: CCCGGTGGACGACGGCCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACGCTGCCGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CAA 72 bp | GCCACCGGCAGCGTGACCACCAGCTGCCGCCGCGCCTaGTTGTACTGTGCCTTGCCGCGGCCGTCGTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: ATGSVTTSCRRA*LYCALPRPSST Trigger: GGTGGACGACGGCCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACGCTGCCGGTGGC 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 72 bp | CCACCAGCTGCCGCCGCGCCTTGTTGTACTGTGCCTTaGCGCGGCCGTCGTCCACCGGGTACGGCAGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PPAAAAPCCTVP*RGRRPPGTAAR Trigger: TCTCGCTGCCGTACCCGGTGGACGACGGCCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 72 bp | CGTGACCACCAGCTGCCGCCGCGCCTTGTTGTACTGTaGCTTGCCGCGGCCGTCGTCCACCGGGTACGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RDHQLPPRLVVL*LAAAVVHRVRQ Trigger: CTGCCGTACCCGGTGGACGACGGCCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGTCACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CCA 72 bp | GTAGCGGTATGGATATGGTGGGTCCGGGAAAAGCCCTaGTGGCTCCCCCTCGGGCTGGGCCGGGACGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VAVWIWWVREKP*WLPLGLGRDAP Trigger: GGGGGCGTCCCGGCCCAGCCCGAGGGGGAGCCACCAGGGCTTTTCCCGGACCCACCATATCCATACCGCTAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS CAA 72 bp | ACCACCAGCTGCCGCCGCGCCTTGTTGTACTGTGCCTaGCCGCGGCCGTCGTCCACCGGGTACGGCAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTSCRRALLYCA*PRPSSTGYGSE Trigger: CTCGCTGCCGTACCCGGTGGACGACGGCCGCGGCAAGGCACAGTACAACAAGGCGCGGCGGCAGCTGGTGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
||
| CDS GCA 72 bp | TCCAGGCTGGTACGCAGCACATGGCCCGGCTCAGGGTaGACGAACCGCACATCCACCCCACGCTCCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRLVRSTWPGSG*TNRTSTPRSRS Trigger: GGAGCGGGAGCGTGGGGTGGATGTGCGGTTCGTGCACCCTGAGCCGGGCCATGTGCTGCGTACCAGCCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS GCA 72 bp | GGAAGACCACGTCGTAGACGGTGTAGCGGGCGCCGTTaGGGCCGGCATACTGGCGGCCGGGAGCCAGGCTAT | + |
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Preference number: 6 (lower is better) Translates to: GRPRRRRCSGRR*GRHTGGREPGY Trigger: ATAGCCTGGCTCCCGGCCGCCAGTATGCCGGCCGCAACGGCGCCCGCTACACCGTCTACGACGTGGTCTTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CCA 72 bp | CAGCGGTGCTCCCCGTCCAGGCTGGTACGCAGCACATaGCCCGGCTCAGGGTGCACGAACCGCACATCCACC | + |
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Preference number: 6 (lower is better) Translates to: QRCSPSRLVRST*PGSGCTNRTST Trigger: GGTGGATGTGCGGTTCGTGCACCCTGAGCCGGGCCATGTGCTGCGTACCAGCCTGGACGGGGAGCACCGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS TCA 72 bp | ACCGCACATCCACCCCACGCTCCCGCTCCAGGGCTGTaGTCTCCTCCTCGTAGCGCCTCCGGTTCTCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: TAHPPHAPAPGL*SPPRSASGSRG Trigger: ACCCCGAGAACCGGAGGCGCTACGAGGAGGAGATCACAGCCCTGGAGCGGGAGCGTGGGGTGGATGTGCGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS TCA 72 bp | CCCCGGGCCGGGCCGGCTGCTAGGTACGCCTACCAGTaGGTTGCTGCACACGTTCACGTAGCAGCGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: PRAGPAARYAYQ*VAAHVHVAAVL Trigger: GAGCACCGCTGCTACGTGAACGTGTGCAGCAACTCACTGGTAGGCGTACCTAGCAGCCGGCCCGGCCCGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CAA 90 bp | GGTAGGGGCGTGCGGAGCACTGCGGCCTCGGGCATCCCCTTGTACTaGATCTTCAGGGTCTTGGCGTTCCTGCGGTCCAGCCTGACGCCG | + |
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Preference number: 6 (lower is better) Translates to: GRGVRSTAASGIPLY*IFRVLAFLRSSLTP Trigger: CGGCGTCAGGCTGGACCGCAGGAACGCCAAGACCCTGAAGATCAAGTACAAGGGGATGCCCGAGGCCGCAGTGCTCCGCACGCCCCTACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CCA 72 bp | ACACGTTCACGTAGCAGCGGTGCTCCCCGTCCAGGCTaGTACGCAGCACATGGCCCGGCTCAGGGTGCACGA | + |
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Preference number: 6 (lower is better) Translates to: TRSRSSGAPRPG*YAAHGPAQGAR Trigger: TCGTGCACCCTGAGCCGGGCCATGTGCTGCGTACCAGCCTGGACGGGGAGCACCGCTGCTACGTGAACGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS TCA 72 bp | TCTCCTCCTCGTAGCGCCTCCGGTTCTCGGGGTCCGTaGTCTCCGCGGCGTACTCGGAGAACATTCGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: SPPRSASGSRGP*SPRRTRRTFGG Trigger: TCCGCCGAATGTTCTCCGAGTACGCCGCGGAGATCACGGACCCCGAGAACCGGAGGCGCTACGAGGAGGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS GCA 72 bp | ACCGCTCTTCTCCCCGTGGTCAGCTCCGGTTCCATCTaGAGACTCTTCCCGCGCCGCTGCAAAATCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: TALLPVVSSGSI*RLFPRRCKIAR Trigger: GCGGGCGATTTTGCAGCGGCGCGGGAAGAGTCTGCAGATGGAACCGGAGCTGACCACGGGGAGAAGAGCGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CAA 72 bp | AGGGGCGTGCGGAGCACTGCGGCCTCGGGCATCCCCTaGTACTTGATCTTCAGGGTCTTGGCGTTCCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: RGVRSTAASGIP*YLIFRVLAFLR Trigger: CCGCAGGAACGCCAAGACCCTGAAGATCAAGTACAAGGGGATGCCCGAGGCCGCAGTGCTCCGCACGCCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS TCA 72 bp | TGCGGAGCACTGCGGCCTCGGGCATCCCCTTGTACTTaGTCTTCAGGGTCTTGGCGTTCCTGCGGTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: CGALRPRASPCT*SSGSWRSCGPA Trigger: GGCTGGACCGCAGGAACGCCAAGACCCTGAAGATCAAGTACAAGGGGATGCCCGAGGCCGCAGTGCTCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CCA 72 bp | CTCCGCGGCGTACTCGGAGAACATTCGGCGGAACTCTaGGTCCTGAAAGGCGGAGGTGAACCGCTGCACCTC | + |
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Preference number: 6 (lower is better) Translates to: LRGVLGEHSAEL*VLKGGGEPLHL Trigger: GAGGTGCAGCGGTTCACCTCCGCCTTTCAGGACCCAGAGTTCCGCCGAATGTTCTCCGAGTACGCCGCGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CAA 72 bp | GTGCGGAGCACTGCGGCCTCGGGCATCCCCTTGTACTaGATCTTCAGGGTCTTGGCGTTCCTGCGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VRSTAASGIPLY*IFRVLAFLRSS Trigger: GCTGGACCGCAGGAACGCCAAGACCCTGAAGATCAAGTACAAGGGGATGCCCGAGGCCGCAGTGCTCCGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CAA 90 bp | AGCACTGCGGCCTCGGGCATCCCCTTGTACTTGATCTTCAGGGTCTaGGCGTTCCTGCGGTCCAGCCTGACGCCGAACTGCTGCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: STAASGIPLYLIFRV*AFLRSSLTPNCCST Trigger: GGTGGAGCAGCAGTTCGGCGTCAGGCTGGACCGCAGGAACGCCAAGACCCTGAAGATCAAGTACAAGGGGATGCCCGAGGCCGCAGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS GCA 72 bp | CCTGATTACACTGTAAAGGAGGGCACACGGGTGCGATaGTCTCGGTTCCGGGGTCACCCATGGCTGAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PDYTVKEGTRVR*SRFRGHPWLSP Trigger: CGGGCTCAGCCATGGGTGACCCCGGAACCGAGAGCATCGCACCCGTGTGCCCTCCTTTACAGTGTAATCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CAA 72 bp | GCCTCGGGCATCCCCTTGTACTTGATCTTCAGGGTCTaGGCGTTCCTGCGGTCCAGCCTGACGCCGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: ASGIPLYLIFRV*AFLRSSLTPNC Trigger: GCAGTTCGGCGTCAGGCTGGACCGCAGGAACGCCAAGACCCTGAAGATCAAGTACAAGGGGATGCCCGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS TCA 72 bp | GCGTACTCGGAGAACATTCGGCGGAACTCTGGGTCCTaGAAGGCGGAGGTGAACCGCTGCACCTCCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: AYSENIRRNSGS*KAEVNRCTSSL Trigger: CAGAGAGGAGGTGCAGCGGTTCACCTCCGCCTTTCAGGACCCAGAGTTCCGCCGAATGTTCTCCGAGTACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CCA 72 bp | GCAGCTGAATCAGAAGCAGCTGGAGAGGTGGCGGACTaGTCAGCGGCTTCTGCTTCACTCAGAGGACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: AAESEAAGEVAD*SAASASLRGQP Trigger: AGGCTGTCCTCTGAGTGAAGCAGAAGCCGCTGACCAGTCCGCCACCTCTCCAGCTGCTTCTGATTCAGCTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS GCA 72 bp | AGCAGCTGGAGAGGTGGCGGACTGGTCAGCGGCTTCTaGTTCACTCAGAGGACAGCCTTCTCTGACTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SSWRGGGLVSGF*FTQRTAFSDSF Trigger: AAAGGAGTCAGAGAAGGCTGTCCTCTGAGTGAAGCAGAAGCCGCTGACCAGTCCGCCACCTCTCCAGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CCA 72 bp | CTGCTCATCAGTGGCCTGAAGAACCTCAATCAGCGGTaGGGCCAGAGACCTTGCCTGCTTCAATGGGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLISGLKNLNQR*GQRPCLLQWGA Trigger: TGCTCCCCATTGAAGCAGGCAAGGTCTCTGGCCCCACCGCTGATTGAGGTTCTTCAGGCCACTGATGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CCA 72 bp | CCTGCAACTCTGCATGGATCTGAACCTGCTCATCAGTaGCCTGAAGAACCTCAATCAGCGGTGGGGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PATLHGSEPAHQ*PEEPQSAVGPE Trigger: CTCTGGCCCCACCGCTGATTGAGGTTCTTCAGGCCACTGATGAGCAGGTTCAGATCCATGCAGAGTTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CAA 72 bp | CCTGAAGAACCTCAATCAGCGGTGGGGCCAGAGACCTaGCCTGCTTCAATGGGGAGCAAAGGACCTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PEEPQSAVGPET*PASMGSKGPLQ Trigger: TTGAAGAGGTCCTTTGCTCCCCATTGAAGCAGGCAAGGTCTCTGGCCCCACCGCTGATTGAGGTTCTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CAA 90 bp | CATCAGTGGCCTGAAGAACCTCAATCAGCGGTGGGGCCAGAGACCTaGCCTGCTTCAATGGGGAGCAAAGGACCTCTTCAAGAAACCCAT | + |
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Preference number: 6 (lower is better) Translates to: HQWPEEPQSAVGPET*PASMGSKGPLQETH Trigger: ATGGGTTTCTTGAAGAGGTCCTTTGCTCCCCATTGAAGCAGGCAAGGTCTCTGGCCCCACCGCTGATTGAGGTTCTTCAGGCCACTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS GCA 72 bp | AGAACCTCAATCAGCGGTGGGGCCAGAGACCTTGCCTaGTTCAATGGGGAGCAAAGGACCTCTTCAAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: RTSISGGARDLA*FNGEQRTSSRN Trigger: GTTTCTTGAAGAGGTCCTTTGCTCCCCATTGAAGCAGGCAAGGTCTCTGGCCCCACCGCTGATTGAGGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS TCA 72 bp | GGCACTTGGATGAGCAAAGTCAAGGAGTCTTCGTCCTaGTTACACTGTAAAGGAGGGCACACGGGTGCGATG | + |
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Preference number: 6 (lower is better) Translates to: GTWMSKVKESSS*LHCKGGHTGAM Trigger: CATCGCACCCGTGTGCCCTCCTTTACAGTGTAATCAGGACGAAGACTCCTTGACTTTGCTCATCCAAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS GCA 72 bp | TTGAAGCCCAGCAGGATCACTACATTCCTGCAACTCTaGATGGATCTGAACCTGCTCATCAGTGGCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LKPSRITTFLQL*MDLNLLISGLK Trigger: CTTCAGGCCACTGATGAGCAGGTTCAGATCCATGCAGAGTTGCAGGAATGTAGTGATCCTGCTGGGCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CAA 72 bp | TGGAGCAAACTGCAAAGTGCAGGAATAACCCGAGTCTaGTGTAGAGAAGCACAATTCGTAACCGACGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: WSKLQSAGITRV*CREAQFVTDGA Trigger: AGCCCCGTCGGTTACGAATTGTGCTTCTCTACACAAGACTCGGGTTATTCCTGCACTTTGCAGTTTGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CCA 72 bp | GCTAGTCTCGGGTTCTCTGGTACTCAACTTATTCTCTaGAGCAAACTGCAAAGTGCAGGAATAACCCGAGTC | + |
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Preference number: 6 (lower is better) Translates to: ASLGFSGTQLIL*SKLQSAGITRV Trigger: GACTCGGGTTATTCCTGCACTTTGCAGTTTGCTCCAGAGAATAAGTTGAGTACCAGAGAACCCGAGACTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CCA 72 bp | TTGTTCAAGCCACAATACCACTCTCGCCAAAGTCCGTaGCTCTCTGGAGATTTTGCCAGTACTATGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: LFKPQYHSRQSP*LSGDFASTMTA Trigger: TGCAGTCATAGTACTGGCAAAATCTCCAGAGAGCCACGGACTTTGGCGAGAGTGGTATTGTGGCTTGAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CCA 72 bp | ACTTTCTCTTATAAACTCAGGATCCATTTTTGCCTCTaGTTGCAGCGGTTTTCCAGACAGTACGTGAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: TFSYKLRIHFCL*LQRFSRQYVRN Trigger: GTTCCTCACGTACTGTCTGGAAAACCGCTGCAACCAGAGGCAAAAATGGATCCTGAGTTTATAAGAGAAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS GCA 72 bp | AGTACTACTTTCTCTTATAAACTCAGGATCCATTTTTaGCTCTGGTTGCAGCGGTTTTCCAGACAGTACGTG | + |
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Preference number: 6 (lower is better) Translates to: STTFSYKLRIHF*LWLQRFSRQYV Trigger: CACGTACTGTCTGGAAAACCGCTGCAACCAGAGGCAAAAATGGATCCTGAGTTTATAAGAGAAAGTAGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS GCA 72 bp | GTCGTGTGGTCTCTAATAATCTGCACACTACCATCCTaGATATTCGTCTCTTTTATAGTGTCAAAGTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VVWSLIICTLPS*IFVSFIVSKSG Trigger: ACCTGACTTTGACACTATAAAAGAGACGAATATGCAGGATGGTAGTGTGCAGATTATTAGAGACCACACGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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| CDS CAA 90 bp | GGGGAGCAAAGGACCTCTTCAAGAAACCCATTAACATTTTCTTCATaGATAAACAATCTTTCCTCCAAAGACTCCTTGTTCAAGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: GEQRTSSRNPLTFSS*INNLSSKDSLFKPQ Trigger: TTGTGGCTTGAACAAGGAGTCTTTGGAGGAAAGATTGTTTATCAATGAAGAAAATGTTAATGGGTTTCTTGAAGAGGTCCTTTGCTCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021356.6 |
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