RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMXL2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041268

Ensembl transcript IDs: ENSMUST00000118163.8, ENSMUST00000118600.8, ENSMUST00000123709.8, ENSMUST00000127880.8

Found 784 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTTCTaGTGCTCTAGAGCGTCACACCCCGGGGCTATCCTTCATTCAACA +
Preference number: 1 (lower is better)
Translates to: GESEWPGLLTVRKGF*CSRASHPGAILHST
Trigger: TGTTGAATGAAGGATAGCCCCGGGGTGTGACGCTCTAGAGCACCAGAAACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR GCA 90 bp GAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTTCTGGTaGTCTAGAGCGTCACACCCCGGGGCTATCCTTCATTCAACAAGA +
Preference number: 1 (lower is better)
Translates to: ESEWPGLLTVRKGFW*SRASHPGAILHSTR
Trigger: TCTTGTTGAATGAAGGATAGCCCCGGGGTGTGACGCTCTAGAGCACCAGAAACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR TCA 90 bp CAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTaGCTGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCT +
Preference number: 1 (lower is better)
Translates to: QSQIPQRLSLLISRC*LSWKTELPNSYITP
Trigger: AGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
3UTR CCA 90 bp GAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTaGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTAAC +
Preference number: 1 (lower is better)
Translates to: EQEGKRESAMFSSSI*YKGPAHYCNLLLAN
Trigger: GTTAGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR-3UTR TCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTAACCTCAAGTGTTTCTaGATCAGGGTTGTTACATGG +
Preference number: 2 (lower is better)
Translates to: KLSRENQSGQACSQLGRVNLKCF*IRVVTW
Trigger: CCATGTAACAACCCTGATTCAGAAACACTTGAGGTT...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCACTGATTTCAAGGTGTTaGCTGTCGTGGAAAACAGAA +
Preference number: 2 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASLISRC*LSWKTE
Trigger: TTCTGTTTTCCACGACAGTCAACACCTTGAAATCAG...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
3UTR-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCAGAGACTCTCTCTGCTaGTTTCAAGGTGTTGACTGT +
Preference number: 2 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFRDSLC*FQGVDC
Trigger: ACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
3UTR-3UTR TCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTAGAGACTCTCTCTGCTaGTTTCAAGGTGTTGACTGT +
Preference number: 2 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLARDSLC*FQGVDC
Trigger: ACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCT...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR-3UTR TCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTCTGATTTCAAGGTGTTaGCTGTCGTGGAAAACAGAA +
Preference number: 2 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTLISRC*LSWKTE
Trigger: TTCTGTTTTCCACGACAGTCAACACCTTGAAATCAG...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR-3UTR TCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTAACCTCAAGTGTTTCTaGATCAGGGTTGTTACATGG +
Preference number: 2 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTNLKCF*IRVVTW
Trigger: CCATGTAACAACCCTGATTCAGAAACACTTGAGGTT...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACTGATTTCAAGGTGTTaGCTGTCGTGGAAAACAGAA +
Preference number: 2 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPLISRC*LSWKTE
Trigger: TTCTGTTTTCCACGACAGTCAACACCTTGAAATCAG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR-3UTR CCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAAACACACACAGACACTaGTTTCAATATTGCAACATA +
Preference number: 2 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPNTHRH*FQYCNI
Trigger: TATGTTGCAATATTGAAACCAGTGTCTGTGTGTGTT...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR CCA 72 bp GAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTTCTaGTGCTCTAGAGCGTCACACCCCGGGGCTATCCTT +
Preference number: 3 (lower is better)
Translates to: EWPGLLTVRKGF*CSRASHPGAIL
Trigger: AAGGATAGCCCCGGGGTGTGACGCTCTAGAGCACCAGAAACCCTTCCTAACTGTGAGCAGGCCTGGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR GCA 72 bp TGGCCAGGCCTGCTCACAGTTAGGAAGGGTTTCTGGTaGTCTAGAGCGTCACACCCCGGGGCTATCCTTCAT +
Preference number: 3 (lower is better)
Translates to: WPGLLTVRKGFW*SRASHPGAILH
Trigger: ATGAAGGATAGCCCCGGGGTGTGACGCTCTAGAGCACCAGAAACCCTTCCTAACTGTGAGCAGGCCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR GCA 72 bp CCGGGGCTATCCTTCATTCAACAAGAGACAGCGGCATaGTCCATCCATGATGAGAACAGGAAGGAAAACGTG +
Preference number: 3 (lower is better)
Translates to: PGLSFIQQETAA*SIHDENRKENV
Trigger: CACGTTTTCCTTCCTGTTCTCATCATGGATGGAGCATGCCGCTGTCTCTTGTTGAATGAAGGATAGCCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR CCA 72 bp ATCAGTATAATGACAGGAACATGCACTCTACCAACCTaGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCA +
Preference number: 3 (lower is better)
Translates to: ISIMTGTCTLPT*VGNTQSKTQLA
Trigger: TGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
3UTR-3UTR CAA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTGCTGATTTCAAGGTGTaGACTGTCGTGGAAAACAGA +
Preference number: 3 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAADFKV*TVVENR
Trigger: TCTGTTTTCCACGACAGTCAACACCTTGAAATCAGC...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
3UTR CCA 72 bp GGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTaGTATAAAGGCCCTGCTCATTACTGTAACTTACTG +
Preference number: 3 (lower is better)
Translates to: GKRESAMFSSSI*YKGPAHYCNLL
Trigger: CAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTGGCTGGCTTGAGGAATaGGAGGCTGCACCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVGWLEE*EAAPGW
Trigger: CCAGCCTGGTGCAGCCTCCCATTCCTCAAGCCAGCC...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGCTCACACCAGGCCACTaGGCAGGAGCTGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRLTPGH*AGAEFG
Trigger: ACCAAACTCAGCTCCTGCTCAGTGGCCTGGTGTGAG...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTCCCTGGTTTTCAGCGTaGCGTCTGCGCCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVPWFSA*RLRHRR
Trigger: TCTCCTGTGGCGCAGACGGCACGCTGAAAACCAGGG...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGGAGTTCCATTCTTACTaGAGCCAGACCACCGCCCTG +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVREFHSY*SQTTAL
Trigger: CAGGGCGGTGGTCTGGCTTCAGTAAGAATGGAACTC...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGTCTTTCTGCAGGCACTaGGGGTGGGGTGGCATCTTT +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRSFCRH*GWGGIF
Trigger: AAAGATGCCACCCCACCCCCAGTGCCTGCAGAAAGA...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTTCTAAGGCACCGTCATaGTCGTCACCCCAATCGAGC +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVSKAPS*SSPQSS
Trigger: GCTCGATTGGGGTGACGATCATGACGGTGCCTTAGA...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGCGATGCTTTCTGTCCTaGGGCGTCGTCGATCACTTA +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRRCFLS*GVVDHL
Trigger: TAAGTGATCGACGACGCCTCAGGACAGAAAGCATCG...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGGGTCTGAGGCACTCTaGTCCTGGCCAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASGSEAL*SWPAFL
Trigger: CAAGAAGGCTGGCCAGGAGCAGAGTGCCTCAGACCC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTGAGGCTGCACCAGGCTaGTACAGGGTTGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVEAAPG*YRVVVE
Trigger: TTCCACTACAACCCTGTACCAGCCTGGTGCAGCCTC...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTGAAGAGGAACTCAGATaGCCTGCTGAAGGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVEEELR*PAEGVA
Trigger: AGCAACGCCTTCAGCAGGTCATCTGAGTTCCTCTTC...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTGTAGACACTCCTTGGTaGAGGAGCTGGACTCGGTAT +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVVDTPW*RSWTRY
Trigger: ATACCGAGTCCAGCTCCTTCACCAAGGAGTGTCTAC...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTGCCTCGTTGTTCCTCTaGAAAGCAGCTTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVASLFL*KAALAT
Trigger: GGTTGCCAAAGCTGCTTTTCAGAGGAACAACGAGGC...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGGAGGAGCCCACAGCTaGATCGAATCCGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASGGAHS*IESVAV
Trigger: GACAGCAACGGATTCGATTCAGCTGTGGGCTCCTCC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGCACAGTATCCGCCAGTaGTACAAGGAACATCTGCTC +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRHSIRQ*YKEHLL
Trigger: GAGCAGATGTTCCTTGTAGCACTGGCGGATACTGTG...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGGCACTCTGCTCCTaGCCAGCCTTCTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASEALCS*PAFLAS
Trigger: AGATGCCAAGAAGGCTGGCCAGGAGCAGAGTGCCTC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCATGCAGGCACTGGGGGTaGGGTGGCATCTTTTACAGG +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASCRHWG*GGIFYR
Trigger: CCTGTAAAAGATGCCACCCCACCCCCAGTGCCTGCA...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCACACTGGGCAGAACCCTaGTTTTCAGCGTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASHWAEP*FSACRL
Trigger: CAGACGGCACGCTGAAAACCAGGGTTCTGCCCAGTG...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGTTGAAGATTGGCAATTaGCGAGGAATGTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRLKIGN*RGMWHG
Trigger: TCCGTGCCACATTCCTCGTCAATTGCCAATCTTCAA...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCATCTAAGGCACCGTCATaGTCGTCACCCCAATCGAGC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASSKAPS*SSPQSS
Trigger: GCTCGATTGGGGTGACGATCATGACGGTGCCTTAGA...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTTCCATTCTTACTaGAGCCAGACCACCGCCCTG +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASEFHSY*SQTTAL
Trigger: CAGGGCGGTGGTCTGGCTTCAGTAAGAATGGAACTC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGGATAGGCCATTCCTGTaGACTGATTTCCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRDRPFL*TDFLPT
Trigger: AGTCGGAAGGAAATCAGTTCACAGGAATGGCCTATC...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAACAGACAAGTTGCTaGGGTCGTGTCCACTCAAAC +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRKQTSC*GRVHSN
Trigger: GTTTGAGTGGACACGACCTCAGCAACTTGTCTGTTT...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGTCGCTCTTAAATGAATaGATCAGGCCATGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRSLLNE*IRPWPV
Trigger: GACAGGCCATGGCCTGATTCATTCATTTAAGAGCGA...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAACCATTGTGGTGGATaGGTTGCTTGTAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRNHCGG*VACKPL
Trigger: CAGTGGCTTACAAGCAACCCATCCACCACAATGGTT...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGCCTCGTTGTTCCTCTaGAAAGCAGCTTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASASLFL*KAALAT
Trigger: GGTTGCCAAAGCTGCTTTTCAGAGGAACAACGAGGC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCACATCATGTTGTGACCTaGACAGACCCCACACTACCG +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASHHVVT*TDPTLP
Trigger: CGGTAGTGTGGGGTCTGTTCAGGTCACAACATGATG...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCATGGCCCCGCTCCCACTaGGAGGTCAGTTGGGTATGT +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISWPRSH*EVSWVC
Trigger: ACATACCCAACTGACCTCTCAGTGGGAGCGGGGCCA...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGCTGATGGACGGGGTGTaGTGTCATTCTCTTAACATT +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRLMDGV*CHSLNI
Trigger: AATGTTAAGAGAATGACATCACACCCCGTCCATCAG...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGCTACAGGGTGTATCGTaGATAACATGTCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRLQGVS*ITCQGS
Trigger: AGAACCCTGACATGTTATTCACGATACACCCTGTAG...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGTCCCACTGACAGTCTaGTTCAGGAGTCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASVPLTV*FRSQQS
Trigger: GCTCTGTTGACTCCTGAATCAGACTGTCAGTGGGAC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTGTTAACAGGCATGTGTaGAAGCGCATAGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVVNRHV*KRIANR
Trigger: CCTGTTAGCTATGCGCTTGCACACATGCCTGTTAAC...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGGGTCTGAGGCACTCTaGTCCTGGCCAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEGSEAL*SWPAFL
Trigger: CAAGAAGGCTGGCCAGGAGCAGAGTGCCTCAGACCC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGGACGTCCCCGACGCTaGCCACCGAATAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEGRPRR*PPNSSC
Trigger: ACAACTGCTATTCGGTGGGCAGCGTCGGGGACGTCC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTAACCATTGTGGTGGATaGGTTGCTTGTAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVNHCGG*VACKPL
Trigger: CAGTGGCTTACAAGCAACCCATCCACCACAATGGTT...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAAGTGGCAGTGGGGACTaGAGCTGCTTCACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASSGSGD*SCFTVV
Trigger: AACTACAGTGAAGCAGCTCCAGTCCCCACTGCCACT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTGCAGGCACTGGGGGTaGGGTGGCATCTTTTACAGG +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLCRHWG*GGIFYR
Trigger: CCTGTAAAAGATGCCACCCCACCCCCAGTGCCTGCA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCTTCGCCTTCCCTCCTaGGTAGCCCAGATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLLRLPS*VAQISF
Trigger: GAAGCTGATCTGGGCTACCCAGGAGGGAAGGCGAAG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCACTGGGCAGAACCCTaGTTTTCAGCGTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLHWAEP*FSACRL
Trigger: CAGACGGCACGCTGAAAACCAGGGTTCTGCCCAGTG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGAAGAGGAACTCAGATaGCCTGCTGAAGGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISREEELR*PAEGVA
Trigger: AGCAACGCCTTCAGCAGGTCATCTGAGTTCCTCTTC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGGATTACTGTCAACACTaGCCCTTGAATCAAGTACAC +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRDYCQH*PLNQVH
Trigger: GTGTACTTGATTCAAGGGTCAGTGTTGACAGTAATC...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCACCAACCCCCACTGTaGGGATGTGAGAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLHQPPL*GCESHL
Trigger: AAGATGGCTCTCACATCCTCACAGTGGGGGTTGGTG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTAAGGCACCGTCATaGTCGTCACCCCAATCGAGC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLSKAPS*SSPQSS
Trigger: GCTCGATTGGGGTGACGATCATGACGGTGCCTTAGA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTCCACCATTTCCTCCTaGTCCAGACGCTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRSTISS*SRRSVS
Trigger: AGAGACTGAGCGTCTGGATCAGGAGGAAATGGTGGA...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGCGATGCTTTCTGTCCTaGGGCGTCGTCGATCACTTA +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRRCFLS*GVVDHL
Trigger: TAAGTGATCGACGACGCCTCAGGACAGAAAGCATCG...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCCACTGAGCAGGAGCTaGGTTTGGTGTTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLPLSRS*VWCCML
Trigger: GAGCATGCAACACCAAACTCAGCTCCTGCTCAGTGG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGGAGGAGCCCACAGCTaGATCGAATCCGTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEGGAHS*IESVAV
Trigger: GACAGCAACGGATTCGATTCAGCTGTGGGCTCCTCC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGGTCCCCTCTTTGGATTaGTGGAATCATATTGATCAG +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRVPSLD*WNHIDQ
Trigger: CTGATCAATATGATTCCAGCAATCCAAAGAGGGGAC...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGTGTCCACTCAAACATaGGGACACTGCCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEVSTQT*GHCRPG
Trigger: CCCAGGACGGCAGTGTCCGCATGTTTGAGTGGACAC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTGAGATTAGGAGTTGTTaGTTGGGGGCATATTGGAGT +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVEIRSC*LGAYWS
Trigger: ACTCCAATATGCCCCCAAGCAACAACTCCTAATCTC...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCCCCTGGTTTTCAGCGTaGCGTCTGCGCCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFPWFSA*RLRHRR
Trigger: TCTCCTGTGGCGCAGACGGCACGCTGAAAACCAGGG...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCACACGGCTCGAGGGTGTaGCAAGTAAACAAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASHGSRV*QVNKGE
Trigger: TTCTCCTTTGTTTACTTGGCACACCCTCGAGCCGTG...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGAGGCACTCTGCTCCTaGCCAGCCTTCTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISEALCS*PAFLAS
Trigger: AGATGCCAAGAAGGCTGGCCAGGAGCAGAGTGCCTC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCGAGGCTGCACCAGGCTaGTACAGGGTTGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLEAAPG*YRVVVE
Trigger: TTCCACTACAACCCTGTACCAGCCTGGTGCAGCCTC...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTGGCTGGCTTGAGGAATaGGAGGCTGCACCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAGWLEE*EAAPGW
Trigger: CCAGCCTGGTGCAGCCTCCCATTCCTCAAGCCAGCC...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAATGCAAAGTCACTTGTaGCCTTACTGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASMQSHL*PYCGTA
Trigger: GGCAGTGCCACAGTAAGGCCACAAGTGACTTTGCAT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGCTTGGGGGCATATTaGAGTACTGTGGCACCATGG +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRCLGAY*STVAPW
Trigger: CCATGGTGCCACAGTACTCCAATATGCCCCCAAGCA...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAACTCAGATGACCTGCTaGAGGCGTTGCTCTTATTAC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASTQMTC*RRCSYY
Trigger: GTAATAAGAGCAACGCCTTCAGCAGGTCATCTGAGT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAAAGGCGGCCTGTGTATaGGCAGCTAACAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEKAACV*AANSNR
Trigger: CCTGTTGCTGTTAGCTGCTCATACACAGGCCGCCTT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACACCAACCCCCACTGTaGGGATGTGAGAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEHQPPL*GCESHL
Trigger: AAGATGGCTCTCACATCCTCACAGTGGGGGTTGGTG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTCCTCAGCTTCAGAATaGAAAGCCCAGGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRSSASE*KAQAKW
Trigger: CCACTTTGCCTGGGCTTTTCATTCTGAAGCTGAGGA...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCACTTAATTCAGACCACTaGGGGTCCCCTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASLNSDH*GSPLWI
Trigger: AATCCAAAGAGGGGACCCTCAGTGGTCTGAATTAAG...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGACTGTAACCATTGGCTaGCTCCAGTCAAACTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRTVTIG*LQSNWE
Trigger: CTCCCAGTTTGACTGGAGTCAGCCAATGGTTACAGT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGATGCTGCTAGTGAATaGAGTGTGTGCACCTTCACA +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASDAASE*SVCTFT
Trigger: TGTGAAGGTGCACACACTTCATTCACTAGCAGCATC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGCAAGAGATTAATGAGTaGGCTCACACCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRQEINE*AHTRPL
Trigger: CAGTGGCCTGGTGTGAGCTCACTCATTAATCTCTTG...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATATGGCCCCGCTCCCACTaGGAGGTCAGTTGGGTATGT +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIWPRSH*EVSWVC
Trigger: ACATACCCAACTGACCTCTCAGTGGGAGCGGGGCCA...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGGCATCAGTTCAGCGTaGGTTACAAGAACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASGISSA*VTRTED
Trigger: GTCTTCTGTTCTTGTAACTCACGCTGAACTGATGCC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACTCTCTCTCGTCCTGTaGGCGCTCCTCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVELSLVL*ALLIFS
Trigger: AGAGAAGATGAGGAGCGCTCACAGGACGAGAGAGAG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCGGCATGCCAGGTCATTaGGGTGGAATCGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFGMPGH*GGIGDH
Trigger: GTGGTCACCGATTCCACCTCAATGACCTGGCATGCC...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCACTACGGAGTTGTGTTTaGCCTGCTCCACATGTTCTT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASLRSCV*PAPHVL
Trigger: AAGAACATGTGGAGCAGGTCAAACACAACTCCGTAG...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR GCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGCATTGGGCATATACATaGATTTCACAATCCATTCCC +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRHWAYT*ISQSIP
Trigger: GGGAATGGATTGTGAAATGCATGTATATGCCCAATG...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGTATTGCAACTTCACCTaGGATGCACTTTACCAAATG +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRYCNFT*DALYQM
Trigger: CATTTGGTAAAGTGCATCGCAGGTGAAGTTGCAATA...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGTTAACAGGCATGTGTaGAAGCGCATAGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASVNRHV*KRIANR
Trigger: CCTGTTAGCTATGCGCTTGCACACATGCCTGTTAAC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCATTTCGTCTTTCTGCATaGTCCCTTTTAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASFRLSA*SLLACS
Trigger: GCTGCAGGCTAAAAGGGAGCATGCAGAAAGACGAAA...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCGTGTCCACTCAAACATaGGGACACTGCCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFVSTQT*GHCRPG
Trigger: CCCAGGACGGCAGTGTCCGCATGTTTGAGTGGACAC...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATATTTCAGCGTGCCGTCTaGGCCACAGGAGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIFQRAV*ATGEEP
Trigger: CGGCTCTTCTCCTGTGGCGCAGACGGCACGCTGAAA...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGTGAAAGTGGCACAGTaGGTTGGCATGGTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASVKVAQ*VGMVRN
Trigger: ATTTCTCACCATGCCAACGCACTGTGCCACTTTCAC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGGTATTTGATCCACATTaGTCAGTTATGGCATCAAGC +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRVFDPH*SVMASS
Trigger: GCTTGATGCCATAACTGACCAATGTGGATCAAATAC...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGATGCACTTTACCAAATaGGAAAGAATGGCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRMHFTK*ERMALA
Trigger: AGCTAAGGCCATTCTTTCCCATTTGGTAAAGTGCAT...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGCCCTCTTTGGATTGCTaGAATCATATTGATCAGTTC +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRPSLDC*NHIDQF
Trigger: GAACTGATCAATATGATTCCAGCAATCCAAAGAGGG...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCAGTGGCAGTGGGGACTaGAGCTGCTTCACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLSGSGD*SCFTVV
Trigger: AACTACAGTGAAGCAGCTCCAGTCCCCACTGCCACT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAATCTTTCTGCAGGCACTaGGGGTGGGGTGGCATCTTT +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVESFCRH*GWGGIF
Trigger: AAAGATGCCACCCCACCCCCAGTGCCTGCAGAAAGA...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTCAGTATCTGAATTTGTaGGACACAGTCAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVQYLNL*DTVRTV
Trigger: CACTGTTCTGACTGTGTCCCACAAATTCAGATACTG...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGTAGACACTCCTTGGTaGAGGAGCTGGACTCGGTAT +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEVDTPW*RSWTRY
Trigger: ATACCGAGTCCAGCTCCTTCACCAAGGAGTGTCTAC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACATCATGTTGTGACCTaGACAGACCCCACACTACCG +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEHHVVT*TDPTLP
Trigger: CGGTAGTGTGGGGTCTGTTCAGGTCACAACATGATG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCATCCACCATTTCCTCCTaGTCCAGACGCTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISSTISS*SRRSVS
Trigger: AGAGACTGAGCGTCTGGATCAGGAGGAAATGGTGGA...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTCTTCAACACTGGGATaGGGTGGTGTTTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRSSTLG*GGVFIC
Trigger: GCAGATGAAAACACCACCTCATCCCAGTGTTGAAGA...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGATGCTGCTAGTGAATaGAGTGTGTGCACCTTCACA +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRDAASE*SVCTFT
Trigger: TGTGAAGGTGCACACACTTCATTCACTAGCAGCATC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCTTGCATTGCCAGCTTaGCGGAAACAGACAAGTTGC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLLALPA*RKQTSC
Trigger: GCAACTTGTCTGTTTCCGTCAAGCTGGCAATGCAAG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGATGCTCGCTCTTAAATaGATGAATCAGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRMLALK*MNQAMA
Trigger: GGCCATGGCCTGATTCATTCATTTAAGAGCGAGCAT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTCTCTCTCTCGTCCTGTaGGCGCTCCTCATCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLILSLVL*ALLIFS
Trigger: AGAGAAGATGAGGAGCGCTCACAGGACGAGAGAGAG...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGAACGTGACTGCCCACTaGTTCAAAGACCCATCTATG +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRNVTAH*FKDPSM
Trigger: CATAGATGGGTCTTTGAATCAGTGGGCAGTCACGTT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGTCCCACTGACAGTCTaGTTCAGGAGTCAACAGAGC +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEVPLTV*FRSQQS
Trigger: GCTCTGTTGACTCCTGAATCAGACTGTCAGTGGGAC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCCTGTCGGAGTCCCACTaGCAGTCTGATTCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFLSESH*QSDSGV
Trigger: GACTCCTGAATCAGACTGTCAGTGGGACTCCGACAG...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGCTACAAGGAACATCTaGTCCAAGCGGGTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTATRNI*SKRVRP
Trigger: AGGCCTTACCCGCTTGGAGCAGATGTTCCTTGTAGC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGCTACAAGGAACATCTaGTCCAAGCGGGTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISATRNI*SKRVRP
Trigger: AGGCCTTACCCGCTTGGAGCAGATGTTCCTTGTAGC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCATACAATCGAATCCTGTaGCGTCTTTCTGACAACCCA +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASYNRIL*RLSDNP
Trigger: TGGGTTGTCAGAAAGACGGCACAGGATTCGATTGTA...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTAGATCTTGGTTTTTCTaGAACCACAGCTTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVRSWFF*NHSFRL
Trigger: AAGACGAAAGCTGTGGTTGCAGAAAAACCAAGATCT...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCAAAACCCTCTCCGTCTaGAACACCACACTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLKTLSV*NTTLVA
Trigger: GGCAACAAGTGTGGTGTTGCAGACGGAGAGGGTTTT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGCTCATCTTCTCTATCTaGATCATCACTTTCATGATC +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRLIFSI*IITFMI
Trigger: GATCATGAAAGTGATGATGCAGATAGAGAAGATGAG...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR GCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCCCCAGAGGGAAATaGAACAGGAATCCGAGAGGA +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTVPRGK*NRNPRG
Trigger: TCCTCTCGGATTCCTGTTGCATTTCCCTCTGGGGAC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGACTTGGATGTTCCCATaGTTAGCACCAGGGATGATC +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRTWMFP*LAPGMI
Trigger: GATCATCCCTGGTGCTAAGCATGGGAACATCCAAGT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAAGCCTGGACGAGCAGTaGACTGTTGGCTCACAATGT +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVESLDEQ*TVGSQC
Trigger: ACATTGTGAGCCAACAGTCCACTGCTCGTCCAGGCT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGCCTGGACGAGCAGTaGACTGTTGGCTCACAATGT +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISSLDEQ*TVGSQC
Trigger: ACATTGTGAGCCAACAGTCCACTGCTCGTCCAGGCT...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCATGCCCTCTGCAGCTTTaGCTAAGCACGCTTGTACAG +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISCPLQL*LSTLVQ
Trigger: CTGTACAAGCGTGCTTAGCCAAAGCTGCAGAGGGCA...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGGAGGCACTCTGCTCCTaGCCAGCCTTCTTGGCATCT +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTEREALCS*PAFLAS
Trigger: AGATGCCAAGAAGGCTGGCCAGGAGCAGAGTGCCTC...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTAGTGGCAGTGGGGACTaGAGCTGCTTCACTGTAGTT +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTSGSGD*SCFTVV
Trigger: AACTACAGTGAAGCAGCTCCAGTCCCCACTGCCACT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGACATAGTTAGGGGGTaGGCCTTCAAAGTGATCCAT +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRDIVRG*AFKVIH
Trigger: ATGGATCACTTTGAAGGCCCACCCCCTAACTATGTC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTCTTCGCCTTCCCTCCTaGGTAGCCCAGATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLALRLPS*VAQISF
Trigger: GAAGCTGATCTGGGCTACCCAGGAGGGAAGGCGAAG...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCTTGTGGCCTTACTGTaGCACTGCCAACTCATGTAC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLLVALL*HCQLMY
Trigger: GTACATGAGTTGGCAGTGCCACAGTAAGGCCACAAG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCAAAGGAGAACTGAGTaGAAGCCCGTCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLQRRTE*KPVSSS
Trigger: TGAAGAGGAGACGGGCTTCCACTCAGTTCTCCTTTG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCATGCTAGGTCGTGGATaGGTTCTAGGACTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLMLGRG*VLGLPS
Trigger: AGAGGGAAGTCCTAGAACCCATCCACGACCTAGCAT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCGCACACTGGGTAAATTaGAGAGGAACTCAGATGACC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLAHWVN*RGTQMT
Trigger: GGTCATCTGAGTTCCTCTTCAATTTACCCAGTGTGC...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCGGCCTGTGTATaGGCAGCTAACAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIKAACV*AANSNR
Trigger: CCTGTTGCTGTTAGCTGCTCATACACAGGCCGCCTT...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGTCAACACTGACCCTTaGATCAAGTACACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRVNTDP*IKYTSN
Trigger: GTTGGAAGTGTACTTGATTCAAGGGTCAGTGTTGAC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGATTACTGTCAACACTaGCCCTTGAATCAAGTACAC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASDYCQH*PLNQVH
Trigger: GTGTACTTGATTCAAGGGTCAGTGTTGACAGTAATC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGCACCAACCCCCACTGTaGGGATGTGAGAGCCATCTT +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERHQPPL*GCESHL
Trigger: AAGATGGCTCTCACATCCTCACAGTGGGGGTTGGTG...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCACAGAAGAACCCATCTTaGCTTAACTCCTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASQKNPS*LNSLLD
Trigger: ATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTG...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAACTGTAACCATTGGCTaGCTCCAGTCAAACTGGGAG +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISTVTIG*LQSNWE
Trigger: CTCCCAGTTTGACTGGAGTCAGCCAATGGTTACAGT...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTCCACTGAGCAGGAGCTaGGTTTGGTGTTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAPLSRS*VWCCML
Trigger: GAGCATGCAACACCAAACTCAGCTCCTGCTCAGTGG...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTCTCACACCAGGCCACTaGGCAGGAGCTGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTLTPGH*AGAEFG
Trigger: ACCAAACTCAGCTCCTGCTCAGTGGCCTGGTGTGAG...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAAAGCCAGTAGAGAAGTaGCATCGAGTTCTTGAACAT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASKPVEK*HRVLEH
Trigger: ATGTTCAAGAACTCGATGTCACTTCTCTACTGGCTT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGAGGCTGTTTCCAGGTaGTATCAATGTGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEEAVSR*YQCVPE
Trigger: CTCTGGGACACATTGATATCACCTGGAAACAGCCTC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGGGGATCTTGAGGTATaGTTGAAGACTTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTGDLEV*LKTSSQ
Trigger: CTGGCTGGAAGTCTTCAATCATACCTCAAGATCCCC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTCTGTCGGAGTCCCACTaGCAGTCTGATTCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLALSESH*QSDSGV
Trigger: GACTCCTGAATCAGACTGTCAGTGGGACTCCGACAG...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACACTCCTCCAGTATATaGCAAAGGTCCAATGGGGTC +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEHSSSI*QRSNGV
Trigger: GACCCCATTGGACCTTTGTCATATACTGGAGGAGTG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTCACTCCTCCAGTATATaGCAAAGGTCCAATGGGGTC +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTHSSSI*QRSNGV
Trigger: GACCCCATTGGACCTTTGTCATATACTGGAGGAGTG...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCAACAATATCACAGCCTaGTCCATATGCCGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLNNITA*SICREG
Trigger: CCCTTCACGGCATATGGATCAGGCTGTGATATTGTT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCGATCAGCTTCGACCTTaGTGTGGCAATCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLDQLRP*CGNLLL
Trigger: TAGCAGAAGATTGCCACATCAAGGTCGAAGCTGATC...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR GCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACACAGTATCCGCCAGTaGTACAAGGAACATCTGCTC +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEHSIRQ*YKEHLL
Trigger: GAGCAGATGTTCCTTGTAGCACTGGCGGATACTGTG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTTTCGTCTTTCTGCATaGTCCCTTTTAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLFRLSA*SLLACS
Trigger: GCTGCAGGCTAAAAGGGAGCATGCAGAAAGACGAAA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCATTCACTGTAGTTTCCTaGTGTGACTCTTGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASFTVVS*CDSCSK
Trigger: TTTGCTGCAAGAGTCACAGCAGGAAACTACAGTGAA...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTTGACAAGGAAATaGCAGAGTCGCTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRCLTRK*QSRLTG
Trigger: TCCTGTCAAGCGACTCTGGCATTTCCTTGTCAAACA...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATATGCTGGTCTGTCCACTaGCTAGCCATGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGICWSVH*LAMAEM
Trigger: CATCTCTGCCATGGCTAGGCAGTGGACAGACCAGCA...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTGCTGGTCTGTCCACTaGCTAGCCATGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERCWSVH*LAMAEM
Trigger: CATCTCTGCCATGGCTAGGCAGTGGACAGACCAGCA...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGCAGTTTGGTTAACTTaGCAGATACTCAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASAVWLT*QILRKP
Trigger: GGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTTTCAGCGTGCCGTCTaGGCCACAGGAGAAGAGCCG +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGFQRAV*ATGEEP
Trigger: CGGCTCTTCTCCTGTGGCGCAGACGGCACGCTGAAA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACCCTGGTTTTCAGCGTaGCGTCTGCGCCACAGGAGA +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPPWFSA*RLRHRR
Trigger: TCTCCTGTGGCGCAGACGGCACGCTGAAAACCAGGG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAATTGTCTCAAGAGCATaGTGGATCCTGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASIVSRA*WILSLC
Trigger: ACACAAAGACAGGATCCAGCATGCTCTTGAGACAAT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTGGACGTCCCCGACGCTaGCCACCGAATAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGGRPRR*PPNSSC
Trigger: ACAACTGCTATTCGGTGGGCAGCGTCGGGGACGTCC...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGACTGAGGTTTTGCACTaGCAGATGCACTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRTEVLH*QMHFQS
Trigger: TGATTGGAAGTGCATCTGGCAGTGCAAAACCTCAGT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACTCAATAATGCAGCCTaGACGAGCAGTGGACTGTTG +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVELNNAA*TSSGLL
Trigger: CAACAGTCCACTGCTCGTCCAGGCTGCATTATTGAG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGACTAAATCATCAAGATaGATCGTCTGTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRTKSSR*IVCSKT
Trigger: GGTTTTAGAACAGACGATCCATCTTGATGATTTAGT...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGTCAACTGTAACCATTaGCTGACTCCAGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRVNCNH*LTPVKL
Trigger: CAGTTTGACTGGAGTCAGCCAATGGTTACAGTTGAC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGGCTGGCTTGAGGAATaGGAGGCTGCACCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIGWLEE*EAAPGW
Trigger: CCAGCCTGGTGCAGCCTCCCATTCCTCAAGCCAGCC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAATGCAAAGTCACTTGTaGCCTTACTGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISMQSHL*PYCGTA
Trigger: GGCAGTGCCACAGTAAGGCCACAAGTGACTTTGCAT...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAATTGAAGATTGGCAATTaGCGAGGAATGTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVELKIGN*RGMWHG
Trigger: TCCGTGCCACATTCCTCGTCAATTGCCAATCTTCAA...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAACTCAGATGACCTGCTaGAGGCGTTGCTCTTATTAC +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISTQMTC*RRCSYY
Trigger: GTAATAAGAGCAACGCCTTCAGCAGGTCATCTGAGT...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCCCCACTGTGAGGATGTaGGAGCCATCTTCTTTTGAC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFPTVRM*EPSSFD
Trigger: GTCAAAAGAAGATGGCTCTCACATCCTCACAGTGGG...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGCAGAAGAACCCATCTTaGCTTAACTCCTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRQKNPS*LNSLLD
Trigger: ATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTG...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAAACAGCTCTGAATATTaGTCCTCTGATTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASNSSEY*SSDWLS
Trigger: TGAAAGCCAATCAGAGGATCAATATTCAGAGCTGTT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCTCCTCAGCTTCAGAATaGAAAGCCCAGGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFSSASE*KAQAKW
Trigger: CCACTTTGCCTGGGCTTTTCATTCTGAAGCTGAGGA...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACCATTGGCTaGCTCCAGTCAAACTGGGAG +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLITVTIG*LQSNWE
Trigger: CTCCCAGTTTGACTGGAGTCAGCCAATGGTTACAGT...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATATCCACCATTTCCTCCTaGTCCAGACGCTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGISTISS*SRRSVS
Trigger: AGAGACTGAGCGTCTGGATCAGGAGGAAATGGTGGA...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGGAGTTCCATTCTTACTaGAGCCAGACCACCGCCCTG +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWEFHSY*SQTTAL
Trigger: CAGGGCGGTGGTCTGGCTTCAGTAAGAATGGAACTC...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCATGTAGTTTCCTGCTGTaGCTCTTGCAGCAAAAATTT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASCSFLL*LLQQKF
Trigger: AAATTTTTGCTGCAAGAGTCACAGCAGGAAACTACA...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTTCTTCAACACTGGGATaGGGTGGTGTTTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTSSTLG*GGVFIC
Trigger: GCAGATGAAAACACCACCTCATCCCAGTGTTGAAGA...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTCGATGCTTTCTGTCCTaGGGCGTCGTCGATCACTTA +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLARCFLS*GVVDHL
Trigger: TAAGTGATCGACGACGCCTCAGGACAGAAAGCATCG...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCGTGACATCGAGTTCTTaGACATCATGTGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLVTSSS*TSCVEA
Trigger: GGCTTCAACACATGATGTTCAAGAACTCGATGTCAC...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAAAACAGACAAGTTGCTaGGGTCGTGTCCACTCAAAC +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEKQTSC*GRVHSN
Trigger: GTTTGAGTGGACACGACCTCAGCAACTTGTCTGTTT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCGAGGCTGTTTCCAGGTaGTATCAATGTGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFEAVSR*YQCVPE
Trigger: CTCTGGGACACATTGATATCACCTGGAAACAGCCTC...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCATCGCTCTTAAATGAATaGATCAGGCCATGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISSLLNE*IRPWPV
Trigger: GACAGGCCATGGCCTGATTCATTCATTTAAGAGCGA...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAATGCTCGCTCTTAAATaGATGAATCAGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISMLALK*MNQAMA
Trigger: GGCCATGGCCTGATTCATTCATTTAAGAGCGAGCAT...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAACGTGACTGCCCACTaGTTCAAAGACCCATCTATG +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISNVTAH*FKDPSM
Trigger: CATAGATGGGTCTTTGAATCAGTGGGCAGTCACGTT...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTAACAGTGGTAAAGGCTaGCTTGTCAGCAAACGTGAC +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTNSGKG*LVSKRD
Trigger: GTCACGTTTGCTGACAAGTCAGCCTTTACCACTGTT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCACTTGACTTAACTCCTTaGTTGATACTACCACCTAGT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASLDLTP*LILPPS
Trigger: ACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAG...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGCAACTTCACCTGCGATaGACTTTACCAAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRQLHLR*TLPNGK
Trigger: TTTCCCATTTGGTAAAGTGCATCGCAGGTGAAGTTG...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTATGGTCCGAGAGAGATaGCGCTTAGTTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLIMVRER*RLVPSP
Trigger: TGGAGAAGGAACTAAGCGGCATCTCTCTCGGACCAT...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGGGTCTGAGGCACTCTaGTCCTGGCCAGCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIGSEAL*SWPAFL
Trigger: CAAGAAGGCTGGCCAGGAGCAGAGTGCCTCAGACCC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAGTGTCCACTCAAACATaGGGACACTGCCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPVSTQT*GHCRPG
Trigger: CCCAGGACGGCAGTGTCCGCATGTTTGAGTGGACAC...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGCGGTTTAGGATTCGATaGAGTTTGGTTAACTTGCCA +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRRFRIR*SLVNLP
Trigger: TGGCAAGTTAACCAAACTGCATCGAATCCTAAACCG...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGTGGTCTCACAAATCTaGTCACCCAAAAGGCAGTCT +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISVVSQI*SPKRQS
Trigger: AGACTGCCTTTTGGGTGAGCAGATTTGTGAGACCAC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTTCCAAATACTTTACATaGCACACTAGAAAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVSKYFT*HTRKVP
Trigger: TGGAACTTTTCTAGTGTGGCATGTAAAGTATTTGGA...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR GCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGAAATGTACGGGTTGCTaGATTTCTCAGAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRKCTGC*ISQRLF
Trigger: AAACAGCCTCTGAGAAATGCAGCAACCCGTACATTT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTTTTTGCACTGCCAGATaGACTTCCAATCATTTAAAA +
Preference number: 4 (lower is better)
Translates to: KLSRENQSGQACSQLGRVFCTAR*TSNHLK
Trigger: TTTTAAATGATTGGAAGTGCATCTGGCAGTGCAAAA...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAATGCACTTTACCAAATaGGAAAGAATGGCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASMHFTK*ERMALA
Trigger: AGCTAAGGCCATTCTTTCCCATTTGGTAAAGTGCAT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGAAAGCCCAGGCAAAGTaGCAGGTAGACACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERKAQAK*QVDTPW
Trigger: CCAAGGAGTGTCTACCTGCCACTTTGCCTGGGCTTT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGCCGAAACAATTCATTaGAAGAATTTGTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASAETIH*KNLWQE
Trigger: CTCTTGCCACAAATTCTTCCAATGAATTGTTTCGGC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCGATTATTTAACGGGTaGGCTGCAAGCCGAAACAAT +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLRLFNG*AASRNN
Trigger: ATTGTTTCGGCTTGCAGCCCACCCGTTAAATAATCG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCTTCGCCTTCCCTCCTaGGTAGCCCAGATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGLRLPS*VAQISF
Trigger: GAAGCTGATCTGGGCTACCCAGGAGGGAAGGCGAAG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTGAGGCTGCACCAGGCTaGTACAGGGTTGTAGTGGAA +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTEAAPG*YRVVVE
Trigger: TTCCACTACAACCCTGTACCAGCCTGGTGCAGCCTC...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTCTTGTGGCCTTACTGTaGCACTGCCAACTCATGTAC +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLILVALL*HCQLMY
Trigger: GTACATGAGTTGGCAGTGCCACAGTAAGGCCACAAG...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCATGCAAAGTCACTTGTaGCCTTACTGTGGCACTGCC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFMQSHL*PYCGTA
Trigger: GGCAGTGCCACAGTAAGGCCACAAGTGACTTTGCAT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTAAGAGCCGATTGTCCTaGCTGATAGCAATCTGCATG +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTKSRLS*LIAICM
Trigger: CATGCAGATTGCTATCAGCCAGGACAATCGGCTCTT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACACTGGGCAGAACCCTaGTTTTCAGCGTGCCGTCTG +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPHWAEP*FSACRL
Trigger: CAGACGGCACGCTGAAAACCAGGGTTCTGCCCAGTG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCCAAAGGAGAACTGAGTaGAAGCCCGTCTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFQRRTE*KPVSSS
Trigger: TGAAGAGGAGACGGGCTTCCACTCAGTTCTCCTTTG...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGACATCATCTCTTGCTaGGATGGGTTGTATGAATCT +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRDIISC*DGLYES
Trigger: AGATTCATACAACCCATCCCAGCAAGAGATGATGTC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTGTAGCTGTGATCCATaGGGACTATCTACAGACATC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLCSCDP*GLSTDI
Trigger: GATGTCTGTAGATAGTCCCCATGGATCACAGCTACA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGGAAGAGGAACTCAGATaGCCTGCTGAAGGCGTTGCT +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWEEELR*PAEGVA
Trigger: AGCAACGCCTTCAGCAGGTCATCTGAGTTCCTCTTC...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCGCACACTGGGTAAATTaGAGAGGAACTCAGATGACC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFAHWVN*RGTQMT
Trigger: GGTCATCTGAGTTCCTCTTCAATTTACCCAGTGTGC...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTAAGGCGGCCTGTGTATaGGCAGCTAACAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGKAACV*AANSNR
Trigger: CCTGTTGCTGTTAGCTGCTCATACACAGGCCGCCTT...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTAGAGCCATCTTCTTTTaGCACCCAGTCCAAATGTAC +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTRAIFF*HPVQMY
Trigger: GTACATTTGGACTGGGTGTCAAAAGAAGATGGCTCT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTCCCACTGTGAGGATGTaGGAGCCATCTTCTTTTGAC +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAPTVRM*EPSSFD
Trigger: GTCAAAAGAAGATGGCTCTCACATCCTCACAGTGGG...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTTGAACCACAGTAGGTaGACAGAAAACATCATCAGG +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLLNHSR*TENIIR
Trigger: CCTGATGATGTTTTCTGTTCACCTACTGTGGTTCAA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAATAAGCCACCATCTTaGACCACAGTAGGTGAACAG +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISNKPPS*TTVGEQ
Trigger: CTGTTCACCTACTGTGGTTCAAGATGGTGGCTTATT...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTTGCTGGAATCATATTaGTCAGTTCTTCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRLLESY*SVLPQL
Trigger: AAGCTGAGGAAGAACTGATCAATATGATTCCAGCAA...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTTTTTTCATCATGTTGTaGCCTGAACAGACCCCACAC +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTFFIML*PEQTPH
Trigger: GTGTGGGGTCTGTTCAGGTCACAACATGATGAAAAA...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCTCTTCAACACTGGGATaGGGTGGTGTTTTCATCTGC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFSSTLG*GGVFIC
Trigger: GCAGATGAAAACACCACCTCATCCCAGTGTTGAAGA...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCGATGCTGCTAGTGAATaGAGTGTGTGCACCTTCACA +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFDAASE*SVCTFT
Trigger: TGTGAAGGTGCACACACTTCATTCACTAGCAGCATC...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCCACTGAGCAGGAGCTaGGTTTGGTGTTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGPLSRS*VWCCML
Trigger: GAGCATGCAACACCAAACTCAGCTCCTGCTCAGTGG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACTCACACCAGGCCACTaGGCAGGAGCTGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYILTPGH*AGAEFG
Trigger: ACCAAACTCAGCTCCTGCTCAGTGGCCTGGTGTGAG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGGGTGGGCCTTCAAAGTaGTCCATTTTCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERGGPSK*SIFSCR
Trigger: TCTGCAGGAGAAAATGGATCACTTTGAAGGCCCACC...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTGACATCGAGTTCTTaGACATCATGTGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTVTSSS*TSCVEA
Trigger: GGCTTCAACACATGATGTTCAAGAACTCGATGTCAC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCAAGCCAGTAGAGAAGTaGCATCGAGTTCTTGAACAT +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLKPVEK*HRVLEH
Trigger: ATGTTCAAGAACTCGATGTCACTTCTCTACTGGCTT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACTGATGGACGGGGTGTaGTGTCATTCTCTTAACATT +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVELMDGV*CHSLNI
Trigger: AATGTTAAGAGAATGACATCACACCCCGTCCATCAG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTAAACAGACAAGTTGCTaGGGTCGTGTCCACTCAAAC +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLIKQTSC*GRVHSN
Trigger: GTTTGAGTGGACACGACCTCAGCAACTTGTCTGTTT...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCACTTGTCAGCAAACGTaGCTGCCCACTGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFTCQQT*LPTDSK
Trigger: CTTTGAATCAGTGGGCAGTCACGTTTGCTGACAAGT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTAACAGTGGTAAAGGCTaGCTTGTCAGCAAACGTGAC +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLINSGKG*LVSKRD
Trigger: GTCACGTTTGCTGACAAGTCAGCCTTTACCACTGTT...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGGCATGCCAGGTCATTaGGGTGGAATCGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIGMPGH*GGIGDH
Trigger: GTGGTCACCGATTCCACCTCAATGACCTGGCATGCC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGTCAACAGAGCATTATaGTGGGAAGATGTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISVNRAL*WEDVSK
Trigger: CTTGCTGACATCTTCCCATCATAATGCTCTGTTGAC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAATTGCATTTGGGTCATaGAATGTACGGGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEIAFGS*NVRVAA
Trigger: TGCAGCAACCCGTACATTTCATGACCCAAATGCAAT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATACACAGCATTCCCATATaGAGCTGCAACTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIHSIPI*SCNSPM
Trigger: CATGGGAGAGTTGCAGCTTCATATGGGAATGCTGTG...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCCAGGTCTTCCCACGATaGTCACAGTACTGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFQVFPR*SQYCCY
Trigger: ATAACAGCAGTACTGTGAGCATCGTGGGAAGACCTG...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAATCATCAGGGATAGCTaGTCCTTCAACAATACTTTT +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASIIRDS*SFNNTF
Trigger: AAAAGTATTGTTGAAGGAGCAGCTATCCCTGATGAT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGATGGTCCGAGAGAGATaGCGCTTAGTTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERMVRER*RLVPSP
Trigger: TGGAGAAGGAACTAAGCGGCATCTCTCTCGGACCAT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTGCTACAAGGAACATCTaGTCCAAGCGGGTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTATRNI*SKRVRP
Trigger: AGGCCTTACCCGCTTGGAGCAGATGTTCCTTGTAGC...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTCACAGTATCCGCCAGTaGTACAAGGAACATCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAHSIRQ*YKEHLL
Trigger: GAGCAGATGTTCCTTGTAGCACTGGCGGATACTGTG...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCGTCCCCTCTTTGGATTaGTGGAATCATATTGATCAG +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLVPSLD*WNHIDQ
Trigger: CTGATCAATATGATTCCAGCAATCCAAAGAGGGGAC...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGAGATCTTGGTTTTTCTaGAACCACAGCTTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRRSWFF*NHSFRL
Trigger: AAGACGAAAGCTGTGGTTGCAGAAAAACCAAGATCT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGAGTTTGGTGTTGCATaGTCTTCGATGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISEFGVA*SSMLSV
Trigger: GACAGAAAGCATCGAAGAGCATGCAACACCAAACTC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCATGCTGGTCTGTCCACTaGCTAGCCATGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPCWSVH*LAMAEM
Trigger: CATCTCTGCCATGGCTAGGCAGTGGACAGACCAGCA...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGAAAACCCTCTCCGTCTaGAACACCACACTTGTTGCC +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERKTLSV*NTTLVA
Trigger: GGCAACAAGTGTGGTGTTGCAGACGGAGAGGGTTTT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGAGATTAGGAGTTGTTaGTTGGGGGCATATTGGAGT +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTEIRSC*LGAYWS
Trigger: ACTCCAATATGCCCCCAAGCAACAACTCCTAATCTC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAGTCAGCAAACGTGACTaGCCACTGATTCAAAGACCC +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIVSKRD*PLIQRP
Trigger: GGGTCTTTGAATCAGTGGGCAGTCACGTTTGCTGAC...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR GCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGGTCAGCAAACGTGACTaGCCACTGATTCAAAGACCC +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERVSKRD*PLIQRP
Trigger: GGGTCTTTGAATCAGTGGGCAGTCACGTTTGCTGAC...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAAGAGTCTTAGATTTTTaGCATCAGATGCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASRVLDF*HQMQQS
Trigger: GCTTTGTTGCATCTGATGGCAAAAATCTAAGACTCT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCACTTGGATGTTCCCATaGTTAGCACCAGGGATGATC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFTWMFP*LAPGMI
Trigger: GATCATCCCTGGTGCTAAGCATGGGAACATCCAAGT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGATGTGGCAATCTTCTaGTACGGAGTTGTGTTTGAC +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISDVAIF*YGVVFD
Trigger: GTCAAACACAACTCCGTAGCAGAAGATTGCCACATC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGTATTTGATCCACATTaGTCAGTTATGGCATCAAGC +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRVFDPH*SVMASS
Trigger: GCTTGATGCCATAACTGACCAATGTGGATCAAATAC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGAAAGCCCAGGCAAAGTaGCAGGTAGACACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWKAQAK*QVDTPW
Trigger: CCAAGGAGTGTCTACCTGCCACTTTGCCTGGGCTTT...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCAACTGTAACCATTaGCTGACTCCAGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTVNCNH*LTPVKL
Trigger: CAGTTTGACTGGAGTCAGCCAATGGTTACAGTTGAC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCACATCTTCAACACTaGGATGAGGTGGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLSHLQH*DEVVFS
Trigger: TGAAAACACCACCTCATCCCAGTGTTGAAGATGTGA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGGCTGGTCTTCATCTTaGGCAGAACTCAAGAGATTA +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISGWSSS*AELKRL
Trigger: TAATCTCTTGAGTTCTGCCCAAGATGAAGACCAGCC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTCTTTCTGCAGGCACTaGGGGTGGGGTGGCATCTTT +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGSFCRH*GWGGIF
Trigger: AAAGATGCCACCCCACCCCCAGTGCCTGCAGAAAGA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTTTTTCCTTGTAAGATaGTCTTTCTGCAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLFFLVR*SFCRHW
Trigger: CCAGTGCCTGCAGAAAGACCATCTTACAAGGAAAAA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTTGCTTGGGGGCATATTaGAGTACTGTGGCACCATGG +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTCLGAY*STVAPW
Trigger: CCATGGTGCCACAGTACTCCAATATGCCCCCAAGCA...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCATTAGGAGTTGTTGCTTaGGGGCATATTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISLGVVA*GHIGVL
Trigger: CAGTACTCCAATATGCCCCCAAGCAACAACTCCTAA...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGATGCTAGGTCGTGGATaGGTTCTAGGACTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERMLGRG*VLGLPS
Trigger: AGAGGGAAGTCCTAGAACCCATCCACGACCTAGCAT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAATGTAGCTGTGATCCATaGGGACTATCTACAGACATC +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVECSCDP*GLSTDI
Trigger: GATGTCTGTAGATAGTCCCCATGGATCACAGCTACA...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCAGGGGTAAAACAGAATaGCATGCCAGGTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFRGKTE*HARSLR
Trigger: CCTCAATGACCTGGCATGCCATTCTGTTTTACCCCT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTATGACAAAGGTCCAATaGGGTCTACACGCCACAAAA +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTMTKVQ*GLHATK
Trigger: TTTTGTGGCGTGTAGACCCCATTGGACCTTTGTCAT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCGTCAACACTGACCCTTaGATCAAGTACACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFVNTDP*IKYTSN
Trigger: GTTGGAAGTGTACTTGATTCAAGGGTCAGTGTTGAC...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTGTCAACACTGACCCTTaGATCAAGTACACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLIVNTDP*IKYTSN
Trigger: GTTGGAAGTGTACTTGATTCAAGGGTCAGTGTTGAC...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCAGAGCCATCTTCTTTTaGCACCCAGTCCAAATGTAC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFRAIFF*HPVQMY
Trigger: GTACATTTGGACTGGGTGTCAAAAGAAGATGGCTCT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCAATAAGCCACCATCTTaGACCACAGTAGGTGAACAG +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFNKPPS*TTVGEQ
Trigger: CTGTTCACCTACTGTGGTTCAAGATGGTGGCTTATT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCAACAGCTCTGAATATTaGTCCTCTGATTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLNSSEY*SSDWLS
Trigger: TGAAAGCCAATCAGAGGATCAATATTCAGAGCTGTT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCTTGAGTGCATTAGATaGCTTGAAAGTACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLLECIR*LESTLA
Trigger: TGCTAGAGTACTTTCAAGTCATCTAATGCACTCAAG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTTCCTCAGCTTCAGAATaGAAAGCCCAGGCAAAGTGG +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTSSASE*KAQAKW
Trigger: CCACTTTGCCTGGGCTTTTCATTCTGAAGCTGAGGA...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTTGCTGGAATCATATTaGTCAGTTCTTCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLLLESY*SVLPQL
Trigger: AAGCTGAGGAAGAACTGATCAATATGATTCCAGCAA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCATCATGTTGTGACCTaGACAGACCCCACACTACCG +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGHHVVT*TDPTLP
Trigger: CGGTAGTGTGGGGTCTGTTCAGGTCACAACATGATG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGGTAGTTGTAAAAACTaGACACCACTGGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTGSCKN*TPLGYK
Trigger: CTTGTAACCCAGTGGTGTTCAGTTTTTACAACTACC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGGATAGGCCATTCCTGTaGACTGATTTCCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERDRPFL*TDFLPT
Trigger: AGTCGGAAGGAAATCAGTTCACAGGAATGGCCTATC...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTCAAGAGATTAATGAGTaGGCTCACACCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTQEINE*AHTRPL
Trigger: CAGTGGCCTGGTGTGAGCTCACTCATTAATCTCTTG...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTGTGACATCGAGTTCTTaGACATCATGTGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLIVTSSS*TSCVEA
Trigger: GGCTTCAACACATGATGTTCAAGAACTCGATGTCAC...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAAAGCCAGTAGAGAAGTaGCATCGAGTTCTTGAACAT +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEKPVEK*HRVLEH
Trigger: ATGTTCAAGAACTCGATGTCACTTCTCTACTGGCTT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATATCGCTCTTAAATGAATaGATCAGGCCATGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGISLLNE*IRPWPV
Trigger: GACAGGCCATGGCCTGATTCATTCATTTAAGAGCGA...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAATGCTCGCTCTTAAATaGATGAATCAGGCCATGGCC +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIMLALK*MNQAMA
Trigger: GGCCATGGCCTGATTCATTCATTTAAGAGCGAGCAT...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCCTACAGGGTGTATCGTaGATAACATGTCAGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFLQGVS*ITCQGS
Trigger: AGAACCCTGACATGTTATTCACGATACACCCTGTAG...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTCGATGCTCACAGTACTaGTGTTATCTTCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTRCSQY*CYLLLH
Trigger: ATGAAGGAGAAGATAACAGCAGTACTGTGAGCATCG...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACAACTTCACCTGCGATaGACTTTACCAAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEQLHLR*TLPNGK
Trigger: TTTCCCATTTGGTAAAGTGCATCGCAGGTGAAGTTG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCTACAATCGAATCCTGTaGCGTCTTTCTGACAACCCA +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFYNRIL*RLSDNP
Trigger: TGGGTTGTCAGAAAGACGGCACAGGATTCGATTGTA...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGCAGCTTTCGTCTTTCTaGATGCTCCCTTTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERQLSSF*MLPFSL
Trigger: CAGGCTAAAAGGGAGCATGCAGAAAGACGAAAGCTG...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATACAGCTTTCGTCTTTCTaGATGCTCCCTTTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIQLSSF*MLPFSL
Trigger: CAGGCTAAAAGGGAGCATGCAGAAAGACGAAAGCTG...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTGAGTTTGGTGTTGCATaGTCTTCGATGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLIEFGVA*SSMLSV
Trigger: GACAGAAAGCATCGAAGAGCATGCAACACCAAACTC...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCGAGTTTGGTGTTGCATaGTCTTCGATGCTTTCTGTC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFEFGVA*SSMLSV
Trigger: GACAGAAAGCATCGAAGAGCATGCAACACCAAACTC...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCGCTTCGACCTCACTCTaGTTTCTTTTCTTAGTGAAA +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLASTSL*FLFLVK
Trigger: TTTCACTAAGAAAAGAAAGCAGAGTGAGGTCGAAGC...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGCAGTTTGGTTAACTTaGCAGATACTCAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTAVWLT*QILRKP
Trigger: GGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGCAGTTTGGTTAACTTaGCAGATACTCAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEAVWLT*QILRKP
Trigger: GGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCACGGTTTAGGATTCGATaGAGTTTGGTTAACTTGCCA +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISRFRIR*SLVNLP
Trigger: TGGCAAGTTAACCAAACTGCATCGAATCCTAAACCG...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCGAGATTAGGAGTTGTTaGTTGGGGGCATATTGGAGT +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFEIRSC*LGAYWS
Trigger: ACTCCAATATGCCCCCAAGCAACAACTCCTAATCTC...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTTTCCGAAATATGGACTaGTTAGCATGCTCGCTCTTA +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTFRNMD*LACSLL
Trigger: TAAGAGCGAGCATGCTAAGCAGTCCATATTTCGGAA...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGGTGAAAGTGGCACAGTaGGTTGGCATGGTGAGAAAT +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERVKVAQ*VGMVRN
Trigger: ATTTCTCACCATGCCAACGCACTGTGCCACTTTCAC...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGCTCATCTTCTCTATCTaGATCATCACTTTCATGATC +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRLIFSI*IITFMI
Trigger: GATCATGAAAGTGATGATGCAGATAGAGAAGATGAG...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCATTTTTGCCATCAGATaGAACAAAGCAAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLIFAIR*NKASTC
Trigger: GCAAGTGCTTGCTTTGTTGCATCTGATGGCAAAAAT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAAGCCTGGACGAGCAGTaGACTGTTGGCTCACAATGT +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPSLDEQ*TVGSQC
Trigger: ACATTGTGAGCCAACAGTCCACTGCTCGTCCAGGCT...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTGCCCTCTGCAGCTTTaGCTAAGCACGCTTGTACAG +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGCPLQL*LSTLVQ
Trigger: CTGTACAAGCGTGCTTAGCCAAAGCTGCAGAGGGCA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGAACCATTGTGGTGGATaGGTTGCTTGTAAGCCACTG +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERNHCGG*VACKPL
Trigger: CAGTGGCTTACAAGCAACCCATCCACCACAATGGTT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAGTTGGATGATACTGTaGCAGAGTAGGAGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGISWMIL*QSRREC
Trigger: GCACTCTCTCCTACTCTGCCACAGTATCATCCAACT...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTAAAGCCCAGGCAAAGTaGCAGGTAGACACTCCTTGG +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGKAQAK*QVDTPW
Trigger: CCAAGGAGTGTCTACCTGCCACTTTGCCTGGGCTTT...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAAACACTGGGATGAGGTaGTGTTTTCATCTGCACAAT +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVENTGMR*CFHLHN
Trigger: ATTGTGCAGATGAAAACACCACCTCATCCCAGTGTT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAATCACATCTTCAACACTaGGATGAGGTGGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVESHLQH*DEVVFS
Trigger: TGAAAACACCACCTCATCCCAGTGTTGAAGATGTGA...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCACATTCAATTTTGGCTaGTCTTCATCTTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLTFNFG*SSSWAE
Trigger: TTCTGCCCAAGATGAAGACCAGCCAAAATTGAATGT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTCGATTATTTAACGGGTaGGCTGCAAGCCGAAACAAT +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLIRLFNG*AASRNN
Trigger: ATTGTTTCGGCTTGCAGCCCACCCGTTAAATAATCG...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTGACATAGTTAGGGGGTaGGCCTTCAAAGTGATCCAT +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLADIVRG*AFKVIH
Trigger: ATGGATCACTTTGAAGGCCCACCCCCTAACTATGTC...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTAAGAGCCGATTGTCCTaGCTGATAGCAATCTGCATG +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAKSRLS*LIAICM
Trigger: CATGCAGATTGCTATCAGCCAGGACAATCGGCTCTT...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCTCCACACAACTGACTTaGATGTTCCCATGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFSTQLT*MFPCLA
Trigger: TGCTAAGCATGGGAACATCCAAGTCAGTTGTGTGGA...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAATAATGAAGTCTTCTTaGAACACGTGCAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEIMKSS*NTCSSC
Trigger: ACAGCTACTGCACGTGTTTCAAGAAGACTTCATTAT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTATAATGAAGTCTTCTTaGAACACGTGCAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTIMKSS*NTCSSC
Trigger: ACAGCTACTGCACGTGTTTCAAGAAGACTTCATTAT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCTGTACAGACTTAAGATaGAGGTGCCACATATGGAGA +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFCTDLR*RCHIWR
Trigger: TCTCCATATGTGGCACCTTCATCTTAAGTCTGTACA...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGGCACACTGGGTAAATTaGAGAGGAACTCAGATGACC +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWAHWVN*RGTQMT
Trigger: GGTCATCTGAGTTCCTCTTCAATTTACCCAGTGTGC...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAACTTGTATTGCCCAGTaGGTTAGTTTCCATACAACA +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVETCIAQ*VSFHTT
Trigger: TGTTGTATGGAAACTAACTCACTGGGCAATACAAGT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGCCTCGTTGTTCCTCTaGAAAGCAGCTTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIASLFL*KAALAT
Trigger: GGTTGCCAAAGCTGCTTTTCAGAGGAACAACGAGGC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTGTTTTTCTCAGTTTTaGGACCTAAAGTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLCFSQF*DLKLPK
Trigger: CTTTGGCAACTTTAGGTCTCAAAACTGAGAAAAACA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCATCCAACTTTAAAATaGGCATTAGCGGTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLHPTLK*ALAVVK
Trigger: TTTTACCACCGCTAATGCTCATTTTAAAGTTGGATG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCTTGCAGCAAAAATTTaGGTTCCATTCTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLLAAKI*VPFLLK
Trigger: CTTCAGTAAGAATGGAACTCAAATTTTTGCTGCAAG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCATGTAGTTTCCTGCTGTaGCTCTTGCAGCAAAAATTT +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISCSFLL*LLQQKF
Trigger: AAATTTTTGCTGCAAGAGTCACAGCAGGAAACTACA...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACAAGAGATTAATGAGTaGGCTCACACCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPQEINE*AHTRPL
Trigger: CAGTGGCCTGGTGTGAGCTCACTCATTAATCTCTTG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTGGTGGGCCTTCAAAGTaGTCCATTTTCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGGGPSK*SIFSCR
Trigger: TCTGCAGGAGAAAATGGATCACTTTGAAGGCCCACC...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAGGTGGGCCTTCAAAGTaGTCCATTTTCTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPGGPSK*SIFSCR
Trigger: TCTGCAGGAGAAAATGGATCACTTTGAAGGCCCACC...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGATGTCAGATTCCTTATaGATGACCTTCGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERMSDSL*MTFAFP
Trigger: AGGGAAGGCGAAGGTCATTCATAAGGAATCTGACAT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCATCCATATATATGATTaGCAAGCCAGTAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLIHIYD*QASREV
Trigger: CACTTCTCTACTGGCTTGTCAATCATATATATGGAT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCTTGCATTGCCAGCTTaGCGGAAACAGACAAGTTGC +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGLALPA*RKQTSC
Trigger: GCAACTTGTCTGTTTCCGTCAAGCTGGCAATGCAAG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGGGCATCAGTTCAGCGTaGGTTACAAGAACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWGISSA*VTRTED
Trigger: GTCTTCTGTTCTTGTAACTCACGCTGAACTGATGCC...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCACAGCATTCCCATATaGAGCTGCAACTCTCCCATG +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGHSIPI*SCNSPM
Trigger: CATGGGAGAGTTGCAGCTTCATATGGGAATGCTGTG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCACTTGACTTAACTCCTTaGTTGATACTACCACCTAGT +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISLDLTP*LILPPS
Trigger: ACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAG...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACATTGGGCATATACATaGATTTCACAATCCATTCCC +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEHWAYT*ISQSIP
Trigger: GGGAATGGATTGTGAAATGCATGTATATGCCCAATG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCATATTGCAACTTCACCTaGGATGCACTTTACCAAATG +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISYCNFT*DALYQM
Trigger: CATTTGGTAAAGTGCATCGCAGGTGAAGTTGCAATA...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTATGGTCCGAGAGAGATaGCGCTTAGTTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGMVRER*RLVPSP
Trigger: TGGAGAAGGAACTAAGCGGCATCTCTCTCGGACCAT...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTTTTCGTCTTTCTGCATaGTCCCTTTTAGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTFRLSA*SLLACS
Trigger: GCTGCAGGCTAAAAGGGAGCATGCAGAAAGACGAAA...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTAGATCTTGGTTTTTCTaGAACCACAGCTTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTRSWFF*NHSFRL
Trigger: AAGACGAAAGCTGTGGTTGCAGAAAAACCAAGATCT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTGTTTGACAAGGAAATaGCAGAGTCGCTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERCLTRK*QSRLTG
Trigger: TCCTGTCAAGCGACTCTGGCATTTCCTTGTCAAACA...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCTTCCGAAATATGGACTaGTTAGCATGCTCGCTCTTA +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFFRNMD*LACSLL
Trigger: TAAGAGCGAGCATGCTAAGCAGTCCATATTTCGGAA...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCATTGTCTCAAGAGCATaGTGGATCCTGTCTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFIVSRA*WILSLC
Trigger: ACACAAAGACAGGATCCAGCATGCTCTTGAGACAAT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGATCATCAATATTAAATaGAGTGCCAACCAGGACATT +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRIINIK*SANQDI
Trigger: AATGTCCTGGTTGGCACTGCATTTAATATTGATGAT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACAGACATCATCTCTTaGTGGGATGGGTTGTATGAA +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLITDIIS*WDGLYE
Trigger: TTCATACAACCCATCCCAGCAAGAGATGATGTCTGT...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCACAGACATCATCTCTTaGTGGGATGGGTTGTATGAA +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFTDIIS*WDGLYE
Trigger: TTCATACAACCCATCCCAGCAAGAGATGATGTCTGT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCAAATGTACGGGTTGCTaGATTTCTCAGAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFKCTGC*ISQRLF
Trigger: AAACAGCCTCTGAGAAATGCAGCAACCCGTACATTT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTTTTGCACTGCCAGATaGACTTCCAATCATTTAAAA +
Preference number: 4 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRFCTAR*TSNHLK
Trigger: TTTTAAATGATTGGAAGTGCATCTGGCAGTGCAAAA...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCAGACACTGAGGTTTTaGACTGCCAGATGCACTTCC +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGQTLRF*TARCTS
Trigger: GGAAGTGCATCTGGCAGTGCAAAACCTCAGTGTCTG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCTCAATAATGCAGCCTaGACGAGCAGTGGACTGTTG +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGLNNAA*TSSGLL
Trigger: CAACAGTCCACTGCTCGTCCAGGCTGCATTATTGAG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATATGCCCTCTGCAGCTTTaGCTAAGCACGCTTGTACAG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYICPLQL*LSTLVQ
Trigger: CTGTACAAGCGTGCTTAGCCAAAGCTGCAGAGGGCA...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCATATTGTCTCTTCAACTaGACTATCAGCGTCAACGTT +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISYCLFN*TISVNV
Trigger: AACGTTGACGCTGATAGTCCAGTTGAAGAGACAATA...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTTATTGTCTCTTCAACTaGACTATCAGCGTCAACGTT +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTYCLFN*TISVNV
Trigger: AACGTTGACGCTGATAGTCCAGTTGAAGAGACAATA...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGGGCTGGTCTTCATCTTaGGCAGAACTCAAGAGATTA +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERGWSSS*AELKRL
Trigger: TAATCTCTTGAGTTCTGCCCAAGATGAAGACCAGCC...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGGACATAGTTAGGGGGTaGGCCTTCAAAGTGATCCAT +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWDIVRG*AFKVIH
Trigger: ATGGATCACTTTGAAGGCCCACCCCCTAACTATGTC...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCGGATTCGATGCAGTTTaGTTAACTTGCCAGATACTC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFGFDAV*LTCQIL
Trigger: GAGTATCTGGCAAGTTAACCAAACTGCATCGAATCC...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCTTGTGGCCTTACTGTaGCACTGCCAACTCATGTAC +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGLVALL*HCQLMY
Trigger: GTACATGAGTTGGCAGTGCCACAGTAAGGCCACAAG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGCCAACCAGGACATTTaGAATATCTGTAGTAGGATT +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTANQDI*NICSRI
Trigger: AATCCTACTACAGATATTCCAAATGTCCTGGTTGGC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGAGGGGTAAAACAGAATaGCATGCCAGGTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWRGKTE*HARSLR
Trigger: CCTCAATGACCTGGCATGCCATTCTGTTTTACCCCT...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATATCCACACAACTGACTTaGATGTTCCCATGCTTAGCA +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGISTQLT*MFPCLA
Trigger: TGCTAAGCATGGGAACATCCAAGTCAGTTGTGTGGA...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTGCTTCGACCTTGATGTaGCAATCTTCTGCTACGGAG +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGASTLM*QSSATE
Trigger: CTCCGTAGCAGAAGATTGCCACATCAAGGTCGAAGC...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR TCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTGTACAGACTTAAGATaGAGGTGCCACATATGGAGA +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERCTDLR*RCHIWR
Trigger: TCTCCATATGTGGCACCTTCATCTTAAGTCTGTACA...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTTGAAGATTGGCAATTaGCGAGGAATGTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGLKIGN*RGMWHG
Trigger: TCCGTGCCACATTCCTCGTCAATTGCCAATCTTCAA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGAGCTTACTAGCAGTTTaGAGATTGGCAATTGACGAG +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERSLLAV*RLAIDE
Trigger: CTCGTCAATTGCCAATCTTCAAACTGCTAGTAAGCT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAACTCAGATGACCTGCTaGAGGCGTTGCTCTTATTAC +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPTQMTC*RRCSYY
Trigger: GTAATAAGAGCAACGCCTTCAGCAGGTCATCTGAGT...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTTGTATTGCCCAGTaGGTTAGTTTCCATACAACA +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLITCIAQ*VSFHTT
Trigger: TGTTGTATGGAAACTAACTCACTGGGCAATACAAGT...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGAGAGCCATCTTCTTTTaGCACCCAGTCCAAATGTAC +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWRAIFF*HPVQMY
Trigger: GTACATTTGGACTGGGTGTCAAAAGAAGATGGCTCT...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACCCACTGTGAGGATGTaGGAGCCATCTTCTTTTGAC +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIPTVRM*EPSSFD
Trigger: GTCAAAAGAAGATGGCTCTCACATCCTCACAGTGGG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTTGAACCACAGTAGGTaGACAGAAAACATCATCAGG +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERLNHSR*TENIIR
Trigger: CCTGATGATGTTTTCTGTTCACCTACTGTGGTTCAA...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACTTAATTCAGACCACTaGGGGTCCCCTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPLNSDH*GSPLWI
Trigger: AATCCAAAGAGGGGACCCTCAGTGGTCTGAATTAAG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAGGTAGTTGTAAAAACTaGACACCACTGGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIGSCKN*TPLGYK
Trigger: CTTGTAACCCAGTGGTGTTCAGTTTTTACAACTACC...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTCATCCAACTTTAAAATaGGCATTAGCGGTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTHPTLK*ALAVVK
Trigger: TTTTACCACCGCTAATGCTCATTTTAAAGTTGGATG...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCACTTGCAGCAAAAATTTaGGTTCCATTCTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISLAAKI*VPFLLK
Trigger: CTTCAGTAAGAATGGAACTCAAATTTTTGCTGCAAG...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTTGTAGTTTCCTGCTGTaGCTCTTGCAGCAAAAATTT +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLICSFLL*LLQQKF
Trigger: AAATTTTTGCTGCAAGAGTCACAGCAGGAAACTACA...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCACATCAGAATCATATATaGCACCACTATCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISHQNHI*HHYQTK
Trigger: CTTTGTCTGATAGTGGTGTCATATATGATTCTGATG...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTCTAATAAATGTCTCCTaGAGAACTTCCTGTTTGACA +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTLINVS*RTSCLT
Trigger: TGTCAAACAGGAAGTTCTTCAGGAGACATTTATTAG...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTCTGATGGACGGGGTGTaGTGTCATTCTCTTAACATT +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTLMDGV*CHSLNI
Trigger: AATGTTAAGAGAATGACATCACACCCCGTCCATCAG...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACTTGCATTGCCAGCTTaGCGGAAACAGACAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYILALPA*RKQTSC
Trigger: GCAACTTGTCTGTTTCCGTCAAGCTGGCAATGCAAG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGAGGCTGTTTCCAGGTaGTATCAATGTGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIEAVSR*YQCVPE
Trigger: CTCTGGGACACATTGATATCACCTGGAAACAGCCTC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTACTTGTCAGCAAACGTaGCTGCCCACTGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGTCQQT*LPTDSK
Trigger: CTTTGAATCAGTGGGCAGTCACGTTTGCTGACAAGT...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTGGTGACCACAGTATCTaGATTTGTGGGACACAGTCA +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGGDHSI*ICGTQS
Trigger: TGACTGTGTCCCACAAATTCAGATACTGTGGTCACC...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAAACAATATCACAGCCTaGTCCATATGCCGTGAAGGG +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPNNITA*SICREG
Trigger: CCCTTCACGGCATATGGATCAGGCTGTGATATTGTT...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR GCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACAGGTCTTCCCACGATaGTCACAGTACTGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPQVFPR*SQYCCY
Trigger: ATAACAGCAGTACTGTGAGCATCGTGGGAAGACCTG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTCCAAATTTGACAGAATaGTTCCATTGGGCATATACA +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTPNLTE*FHWAYT
Trigger: TGTATATGCCCAATGGAAGCATTCTGTCAAATTTGG...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACCAAATTTGACAGAATaGTTCCATTGGGCATATACA +
Preference number: 4 (lower is better)
Translates to: SNSTETLSADFKVLTVVEPNLTE*FHWAYT
Trigger: TGTATATGCCCAATGGAAGCATTCTGTCAAATTTGG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGCAACTTCACCTGCGATaGACTTTACCAAATGGGAAA +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERQLHLR*TLPNGK
Trigger: TTTCCCATTTGGTAAAGTGCATCGCAGGTGAAGTTG...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTTCACTGTAGTTTCCTaGTGTGACTCTTGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERFTVVS*CDSCSK
Trigger: TTTGCTGCAAGAGTCACAGCAGGAAACTACAGTGAA...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTTTCACTGTAGTTTCCTaGTGTGACTCTTGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAFTVVS*CDSCSK
Trigger: TTTGCTGCAAGAGTCACAGCAGGAAACTACAGTGAA...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCCAAATACTTTACATaGCACACTAGAAAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLSKYFT*HTRKVP
Trigger: TGGAACTTTTCTAGTGTGGCATGTAAAGTATTTGGA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGAACAAAGCAAGCACTTaGAGAATTGCAGTATGTGCC +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERNKAST*RIAVCA
Trigger: GGCACATACTGCAATTCTGCAAGTGCTTGCTTTGTT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTATTTTTGCCATCAGATaGAACAAAGCAAGCACTTGC +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLIIFAIR*NKASTC
Trigger: GCAAGTGCTTGCTTTGTTGCATCTGATGGCAAAAAT...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR GCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACAGACACTGAGGTTTTaGACTGCCAGATGCACTTCC +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIQTLRF*TARCTS
Trigger: GGAAGTGCATCTGGCAGTGCAAAACCTCAGTGTCTG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCCCCTCTTTGGATTGCTaGAATCATATTGATCAGTTC +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFPSLDC*NHIDQF
Trigger: GAACTGATCAATATGATTCCAGCAATCCAAAGAGGG...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAACACTGGGATGAGGTaGTGTTTTCATCTGCACAAT +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGINTGMR*CFHLHN
Trigger: ATTGTGCAGATGAAAACACCACCTCATCCCAGTGTT...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTCATTGGAAGAATTTGTaGCAAGAGCATGTATCAGTA +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTHWKNL*QEHVSV
Trigger: TACTGATACATGCTCTTGCCACAAATTCTTCCAATG...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTGGATTCGATGCAGTTTaGTTAACTTGCCAGATACTC +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAGFDAV*LTCQIL
Trigger: GAGTATCTGGCAAGTTAACCAAACTGCATCGAATCC...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGCTTGAGTGCATTAGATaGCTTGAAAGTACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERLECIR*LESTLA
Trigger: TGCTAGAGTACTTTCAAGTCATCTAATGCACTCAAG...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACTTAATTCAGACCACTaGGGGTCCCCTCTTTGGATT +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYILNSDH*GSPLWI
Trigger: AATCCAAAGAGGGGACCCTCAGTGGTCTGAATTAAG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTTTTTCATCATGTTGTaGCCTGAACAGACCCCACAC +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGFFIML*PEQTPH
Trigger: GTGTGGGGTCTGTTCAGGTCACAACATGATGAAAAA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTTGTTTTTCTCAGTTTTaGGACCTAAAGTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLICFSQF*DLKLPK
Trigger: CTTTGGCAACTTTAGGTCTCAAAACTGAGAAAAACA...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGATAGGCCATTCCTGTaGACTGATTTCCTTCCGACT +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIDRPFL*TDFLPT
Trigger: AGTCGGAAGGAAATCAGTTCACAGGAATGGCCTATC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTCATCAGAATCATATATaGCACCACTATCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLIHQNHI*HHYQTK
Trigger: CTTTGTCTGATAGTGGTGTCATATATGATTCTGATG...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCCATCAGAATCATATATaGCACCACTATCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFHQNHI*HHYQTK
Trigger: CTTTGTCTGATAGTGGTGTCATATATGATTCTGATG...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCCTAATAAATGTCTCCTaGAGAACTTCCTGTTTGACA +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFLINVS*RTSCLT
Trigger: TGTCAAACAGGAAGTTCTTCAGGAGACATTTATTAG...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTATGTCAGATTCCTTATaGATGACCTTCGCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGMSDSL*MTFAFP
Trigger: AGGGAAGGCGAAGGTCATTCATAAGGAATCTGACAT...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCATCCATATATATGATTaGCAAGCCAGTAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFIHIYD*QASREV
Trigger: CACTTCTCTACTGGCTTGTCAATCATATATATGGAT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATATTAGCTGTCTCTGTCTaGTGTCAAAAATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGILAVSV*CQKCRC
Trigger: ACATCTGCATTTTTGACATCAGACAGAGACAGCTAA...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCGACACACACCATCATaGCATGAAGTCAGTAAGACA +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGRHTPS*HEVSKT
Trigger: TGTCTTACTGACTTCATGTCATGATGGTGTGTGTCG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGGTGACCACAGTATCTaGATTTGTGGGACACAGTCA +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIGDHSI*ICGTQS
Trigger: TGACTGTGTCCCACAAATTCAGATACTGTGGTCACC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTATTGCATTTGGGTCATaGAATGTACGGGTTGCTGCA +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGIAFGS*NVRVAA
Trigger: TGCAGCAACCCGTACATTTCATGACCCAAATGCAAT...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGCGATGCTCACAGTACTaGTGTTATCTTCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWRCSQY*CYLLLH
Trigger: ATGAAGGAGAAGATAACAGCAGTACTGTGAGCATCG...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATACATTGGGCATATACATaGATTTCACAATCCATTCCC +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIHWAYT*ISQSIP
Trigger: GGGAATGGATTGTGAAATGCATGTATATGCCCAATG...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTATCATCAGGGATAGCTaGTCCTTCAACAATACTTTT +
Preference number: 4 (lower is better)
Translates to: NVSQQCFLPPFGIKALLIIIRDS*SFNNTF
Trigger: AAAAGTATTGTTGAAGGAGCAGCTATCCCTGATGAT...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTTATTGCAACTTCACCTaGGATGCACTTTACCAAATG +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAYCNFT*DALYQM
Trigger: CATTTGGTAAAGTGCATCGCAGGTGAAGTTGCAATA...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGTTAACAGGCATGTGTaGAAGCGCATAGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIVNRHV*KRIANR
Trigger: CCTGTTAGCTATGCGCTTGCACACATGCCTGTTAAC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACAGCTTTCGTCTTTCTaGATGCTCCCTTTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIQLSSF*MLPFSL
Trigger: CAGGCTAAAAGGGAGCATGCAGAAAGACGAAAGCTG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCATGTTTGACAAGGAAATaGCAGAGTCGCTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPCLTRK*QSRLTG
Trigger: TCCTGTCAAGCGACTCTGGCATTTCCTTGTCAAACA...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTATCATCAATATTAAATaGAGTGCCAACCAGGACATT +
Preference number: 4 (lower is better)
Translates to: ASESNSTETLSADFKVLTIINIK*SANQDI
Trigger: AATGTCCTGGTTGGCACTGCATTTAATATTGATGAT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGAACAAAGCAAGCACTTaGAGAATTGCAGTATGTGCC +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWNKAST*RIAVCA
Trigger: GGCACATACTGCAATTCTGCAAGTGCTTGCTTTGTT...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR GCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTACTGAGGTTTTGCACTaGCAGATGCACTTCCAATCA +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGTEVLH*QMHFQS
Trigger: TGATTGGAAGTGCATCTGGCAGTGCAAAACCTCAGT...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGGAGTTGTGTTTGACCTaGTCCACATGTTCTTCTACA +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWELCLT*STCSST
Trigger: TGTAGAAGAACATGTGGAGCAGGTCAAACACAACTC...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CCA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAACTAAATCATCAAGATaGATCGTCTGTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISTKSSR*IVCSKT
Trigger: GGTTTTAGAACAGACGATCCATCTTGATGATTTAGT...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAAGTTGGATGATACTGTaGCAGAGTAGGAGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYISWMIL*QSRREC
Trigger: GCACTCTCTCCTACTCTGCCACAGTATCATCCAACT...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTTCTGAAAAGCAGCTTTaGCAACCTTTTCAATGCATC +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLASEKQL*QPFQCI
Trigger: GATGCATTGAAAAGGTTGCCAAAGCTGCTTTTCAGA...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTCTGAAAAGCAGCTTTaGCAACCTTTTCAATGCATC +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERSEKQL*QPFQCI
Trigger: GATGCATTGAAAAGGTTGCCAAAGCTGCTTTTCAGA...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATATCTGAAAAGCAGCTTTaGCAACCTTTTCAATGCATC +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGISEKQL*QPFQCI
Trigger: GATGCATTGAAAAGGTTGCCAAAGCTGCTTTTCAGA...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGAACACTGGGATGAGGTaGTGTTTTCATCTGCACAAT +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWNTGMR*CFHLHN
Trigger: ATTGTGCAGATGAAAACACCACCTCATCCCAGTGTT...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTGGCTGGTCTTCATCTTaGGCAGAACTCAAGAGATTA +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGGWSSS*AELKRL
Trigger: TAATCTCTTGAGTTCTGCCCAAGATGAAGACCAGCC...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAACATTCAATTTTGGCTaGTCTTCATCTTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGITFNFG*SSSWAE
Trigger: TTCTGCCCAAGATGAAGACCAGCCAAAATTGAATGT...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTGCCGAAACAATTCATTaGAAGAATTTGTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAAETIH*KNLWQE
Trigger: CTCTTGCCACAAATTCTTCCAATGAATTGTTTCGGC...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGGCCGAAACAATTCATTaGAAGAATTTGTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERAETIH*KNLWQE
Trigger: CTCTTGCCACAAATTCTTCCAATGAATTGTTTCGGC...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACGATTATTTAACGGGTaGGCTGCAAGCCGAAACAAT +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPRLFNG*AASRNN
Trigger: ATTGTTTCGGCTTGCAGCCCACCCGTTAAATAATCG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCATTAGGAGTTGTTGCTTaGGGGCATATTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPLGVVA*GHIGVL
Trigger: CAGTACTCCAATATGCCCCCAAGCAACAACTCCTAA...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAAAGAGCCGATTGTCCTaGCTGATAGCAATCTGCATG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIKSRLS*LIAICM
Trigger: CATGCAGATTGCTATCAGCCAGGACAATCGGCTCTT...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTGACATCATCTCTTGCTaGGATGGGTTGTATGAATCT +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTDIISC*DGLYES
Trigger: AGATTCATACAACCCATCCCAGCAAGAGATGATGTC...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAATGACAAAGGTCCAATaGGGTCTACACGCCACAAAA +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPMTKVQ*GLHATK
Trigger: TTTTGTGGCGTGTAGACCCCATTGGACCTTTGTCAT...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR TCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGATAATGAAGTCTTCTTaGAACACGTGCAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWIMKSS*NTCSSC
Trigger: ACAGCTACTGCACGTGTTTCAAGAAGACTTCATTAT...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAAGCTTACTAGCAGTTTaGAGATTGGCAATTGACGAG +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPSLLAV*RLAIDE
Trigger: CTCGTCAATTGCCAATCTTCAAACTGCTAGTAAGCT...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAGATTACTGTCAACACTaGCCCTTGAATCAAGTACAC +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPDYCQH*PLNQVH
Trigger: GTGTACTTGATTCAAGGGTCAGTGTTGACAGTAATC...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCAGAAGAACCCATCTTaGCTTAACTCCTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGQKNPS*LNSLLD
Trigger: ATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCATTGAACCACAGTAGGTaGACAGAAAACATCATCAGG +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPLNHSR*TENIIR
Trigger: CCTGATGATGTTTTCTGTTCACCTACTGTGGTTCAA...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAAATAAGCCACCATCTTaGACCACAGTAGGTGAACAG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYINKPPS*TTVGEQ
Trigger: CTGTTCACCTACTGTGGTTCAAGATGGTGGCTTATT...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGAACAGCTCTGAATATTaGTCCTCTGATTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWNSSEY*SSDWLS
Trigger: TGAAAGCCAATCAGAGGATCAATATTCAGAGCTGTT...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGTTGCTGGAATCATATTaGTCAGTTCTTCCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWLLESY*SVLPQL
Trigger: AAGCTGAGGAAGAACTGATCAATATGATTCCAGCAA...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATATTTTTCATCATGTTGTaGCCTGAACAGACCCCACAC +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIFFIML*PEQTPH
Trigger: GTGTGGGGTCTGTTCAGGTCACAACATGATGAAAAA...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAGGTAGTTGTAAAAACTaGACACCACTGGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPGSCKN*TPLGYK
Trigger: CTTGTAACCCAGTGGTGTTCAGTTTTTACAACTACC...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTTGTTTTTCTCAGTTTTaGGACCTAAAGTTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLACFSQF*DLKLPK
Trigger: CTTTGGCAACTTTAGGTCTCAAAACTGAGAAAAACA...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTCTTGCAGCAAAAATTTaGGTTCCATTCTTACTGAAG +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLALAAKI*VPFLLK
Trigger: CTTCAGTAAGAATGGAACTCAAATTTTTGCTGCAAG...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTATCCATATATATGATTaGCAAGCCAGTAGAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAIHIYD*QASREV
Trigger: CACTTCTCTACTGGCTTGTCAATCATATATATGGAT...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGTTAGCTGTCTCTGTCTaGTGTCAAAAATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWLAVSV*CQKCRC
Trigger: ACATCTGCATTTTTGACATCAGACAGAGACAGCTAA...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACGACACACACCATCATaGCATGAAGTCAGTAAGACA +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIRHTPS*HEVSKT
Trigger: TGTCTTACTGACTTCATGTCATGATGGTGTGTGTCG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGTCAACAGAGCATTATaGTGGGAAGATGTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIVNRAL*WEDVSK
Trigger: CTTGCTGACATCTTCCCATCATAATGCTCTGTTGAC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR GCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACGATGCTCACAGTACTaGTGTTATCTTCTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPRCSQY*CYLLLH
Trigger: ATGAAGGAGAAGATAACAGCAGTACTGTGAGCATCG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGCTTGACTTAACTCCTTaGTTGATACTACCACCTAGT +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWLDLTP*LILPPS
Trigger: ACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAG...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATATACAATCGAATCCTGTaGCGTCTTTCTGACAACCCA +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIYNRIL*RLSDNP
Trigger: TGGGTTGTCAGAAAGACGGCACAGGATTCGATTGTA...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACGGTTTAGGATTCGATaGAGTTTGGTTAACTTGCCA +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPRFRIR*SLVNLP
Trigger: TGGCAAGTTAACCAAACTGCATCGAATCCTAAACCG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTTCCGAAATATGGACTaGTTAGCATGCTCGCTCTTA +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGFRNMD*LACSLL
Trigger: TAAGAGCGAGCATGCTAAGCAGTCCATATTTCGGAA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTTATTGTCTCTTCAACTaGACTATCAGCGTCAACGTT +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTYCLFN*TISVNV
Trigger: AACGTTGACGCTGATAGTCCAGTTGAAGAGACAATA...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATGCACTTTACCAAATaGGAAAGAATGGCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTMHFTK*ERMALA
Trigger: AGCTAAGGCCATTCTTTCCCATTTGGTAAAGTGCAT...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTCCCTCTTTGGATTGCTaGAATCATATTGATCAGTTC +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTPSLDC*NHIDQF
Trigger: GAACTGATCAATATGATTCCAGCAATCCAAAGAGGG...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGTCAACTGTAACCATTaGCTGACTCCAGTCAAACTG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIVNCNH*LTPVKL
Trigger: CAGTTTGACTGGAGTCAGCCAATGGTTACAGTTGAC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGACATTCAATTTTGGCTaGTCTTCATCTTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWTFNFG*SSSWAE
Trigger: TTCTGCCCAAGATGAAGACCAGCCAAAATTGAATGT...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCATTTTTCCTTGTAAGATaGTCTTTCTGCAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPFFLVR*SFCRHW
Trigger: CCAGTGCCTGCAGAAAGACCATCTTACAAGGAAAAA...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTGGATTCGATGCAGTTTaGTTAACTTGCCAGATACTC +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGGFDAV*LTCQIL
Trigger: GAGTATCTGGCAAGTTAACCAAACTGCATCGAATCC...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATATTAGGAGTTGTTGCTTaGGGGCATATTGGAGTACTG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYILGVVA*GHIGVL
Trigger: CAGTACTCCAATATGCCCCCAAGCAACAACTCCTAA...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCAGTATCTGAATTTGTaGGACACAGTCAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGQYLNL*DTVRTV
Trigger: CACTGTTCTGACTGTGTCCCACAAATTCAGATACTG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCATGGTCGATATCCTTGTaGTGGCTGGAAAAATATTTC +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPWSISL*WLEKYF
Trigger: GAAATATTTTTCCAGCCATCACAAGGATATCGACCA...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTGGTCGATATCCTTGTaGTGGCTGGAAAAATATTTC +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGWSISL*WLEKYF
Trigger: GAAATATTTTTCCAGCCATCACAAGGATATCGACCA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATATGTACAGACTTAAGATaGAGGTGCCACATATGGAGA +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYICTDLR*RCHIWR
Trigger: TCTCCATATGTGGCACCTTCATCTTAAGTCTGTACA...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAACTTGTATTGCCCAGTaGGTTAGTTTCCATACAACA +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPTCIAQ*VSFHTT
Trigger: TGTTGTATGGAAACTAACTCACTGGGCAATACAAGT...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR TCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTTAGCTGTCTCTGTCTaGTGTCAAAAATGCAGATGT +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGLAVSV*CQKCRC
Trigger: ACATCTGCATTTTTGACATCAGACAGAGACAGCTAA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGTCCCCTCTTTGGATTaGTGGAATCATATTGATCAG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIVPSLD*WNHIDQ
Trigger: CTGATCAATATGATTCCAGCAATCCAAAGAGGGGAC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTAGAGTCTTAGATTTTTaGCATCAGATGCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTRVLDF*HQMQQS
Trigger: GCTTTGTTGCATCTGATGGCAAAAATCTAAGACTCT...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTGTATTTGATCCACATTaGTCAGTTATGGCATCAAGC +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGVFDPH*SVMASS
Trigger: GCTTGATGCCATAACTGACCAATGTGGATCAAATAC...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAACTAAATCATCAAGATaGATCGTCTGTTCTAAAACC +
Preference number: 4 (lower is better)
Translates to: ENRKENVSQQCFLPPFGITKSSR*IVCSKT
Trigger: GGTTTTAGAACAGACGATCCATCTTGATGATTTAGT...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATATCACATCTTCAACACTaGGATGAGGTGGTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYISHLQH*DEVVFS
Trigger: TGAAAACACCACCTCATCCCAGTGTTGAAGATGTGA...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGCATTGGAAGAATTTGTaGCAAGAGCATGTATCAGTA +
Preference number: 4 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWHWKNL*QEHVSV
Trigger: TACTGATACATGCTCTTGCCACAAATTCTTCCAATG...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATATTTTTCCTTGTAAGATaGTCTTTCTGCAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIFFLVR*SFCRHW
Trigger: CCAGTGCCTGCAGAAAGACCATCTTACAAGGAAAAA...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTGCCAACCAGGACATTTaGAATATCTGTAGTAGGATT +
Preference number: 4 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGANQDI*NICSRI
Trigger: AATCCTACTACAGATATTCCAAATGTCCTGGTTGGC...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR TCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACTAATAAATGTCTCCTaGAGAACTTCCTGTTTGACA +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPLINVS*RTSCLT
Trigger: TGTCAAACAGGAAGTTCTTCAGGAGACATTTATTAG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAATCATCAGGGATAGCTaGTCCTTCAACAATACTTTT +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPIIRDS*SFNNTF
Trigger: AAAAGTATTGTTGAAGGAGCAGCTATCCCTGATGAT...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CCA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATTGGAAGAATTTGTaGCAAGAGCATGTATCAGTA +
Preference number: 4 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPHWKNL*QEHVSV
Trigger: TACTGATACATGCTCTTGCCACAAATTCTTCCAATG...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR GCA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACCAAATTTGACAGAATaGTTCCATTGGGCATATACA +
Preference number: 4 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIPNLTE*FHWAYT
Trigger: TGTATATGCCCAATGGAAGCATTCTGTCAAATTTGG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 90 bp CCTAGCCATGGCAGAGATGGAGGTGGGTGTGGCTGGCTTGAGGAATaGGAGGCTGCACCAGGCTGGTACAGGGTTGTAGTGGAACCACGG +
Preference number: 5 (lower is better)
Translates to: PSHGRDGGGCGWLEE*EAAPGWYRVVVEPR
Trigger: CCGTGGTTCCACTACAACCCTGTACCAGCCTGGTGCAGCCTCCCATTCCTCAAGCCAGCCACACCCACCTCCATCTCTGCCATGGCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 90 bp GTCTGTCCACTGCCTAGCCATGGCAGAGATGGAGGTGGGTGTGGCTaGCTTGAGGAATGGGAGGCTGCACCAGGCTGGTACAGGGTTGTA +
Preference number: 5 (lower is better)
Translates to: VCPLPSHGRDGGGCG*LEEWEAAPGWYRVV
Trigger: TACAACCCTGTACCAGCCTGGTGCAGCCTCCCATTCCTCAAGCCAGCCACACCCACCTCCATCTCTGCCATGGCTAGGCAGTGGACAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 90 bp CCCCAATCGAGCCTAAGAGGCTCCTCGTCAACTGTAACCATTGGCTaGCTCCAGTCAAACTGGGAGGAAGTCACAGCCGACCAGTCAGCC +
Preference number: 5 (lower is better)
Translates to: PQSSLRGSSSTVTIG*LQSNWEEVTADQSA
Trigger: GGCTGACTGGTCGGCTGTGACTTCCTCCCAGTTTGACTGGAGTCAGCCAATGGTTACAGTTGACGAGGAGCCTCTTAGGCTCGATTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 90 bp AGGAAGTCACAGCCGACCAGTCAGCCCCAGAACCACCATCACTCCTaGTCACTGGTTTTGATTCTGATGGCCCGTTCTCCATCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RKSQPTSQPQNHHHS*SLVLILMARSPSFQ
Trigger: CTGGAAGGATGGAGAACGGGCCATCAGAATCAAAACCAGTGAGCAGGAGTGATGGTGGTTCTGGGGCTGACTGGTCGGCTGTGACTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTAATCTCCTGCGGTGCTaGTCCATGTCCTCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: KLSRENQSGQACSQLGRVNLLRC*SMSSEA
Trigger: GGCCTCTGAGGACATGGACAAGCACCGCAGGAGATT...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS TCA 90 bp GTGGTGGATGGGTTGCTTGTAAGCCACTGCAAGGCGGCCTGTGTATaGGCAGCTAACAGCAACAGGTCTTCCCACGATGCTCACAGTACT +
Preference number: 5 (lower is better)
Translates to: VVDGLLVSHCKAACV*AANSNRSSHDAHST
Trigger: AGTACTGTGAGCATCGTGGGAAGACCTGTTGCTGTTAGCTGCTCATACACAGGCCGCCTTGCAGTGGCTTACAAGCAACCCATCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS GCA 90 bp GTTTTCATCAAGCTCCGTACTGGTGGTTGCCACAGTATCCGCCAGTaGTACAAGGAACATCTGCTCCAAGCGGGTAAGGCCTGGCAGACT +
Preference number: 5 (lower is better)
Translates to: VFIKLRTGGCHSIRQ*YKEHLLQAGKAWQT
Trigger: AGTCTGCCAGGCCTTACCCGCTTGGAGCAGATGTTCCTTGTAGCACTGGCGGATACTGTGGCAACCACCAGTACGGAGCTTGATGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 90 bp GATGTTAAAAGCACTGGGCAGAACCCTGGTTTTCAGCGTGCCGTCTaGGCCACAGGAGAAGAGCCGATTGTCCTGGCTGATAGCAATCTG +
Preference number: 5 (lower is better)
Translates to: DVKSTGQNPGFQRAV*ATGEEPIVLADSNL
Trigger: CAGATTGCTATCAGCCAGGACAATCGGCTCTTCTCCTGTGGCGCAGACGGCACGCTGAAAACCAGGGTTCTGCCCAGTGCTTTTAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 90 bp GTTTTCAGCGTGCCGTCTGCGCCACAGGAGAAGAGCCGATTGTCCTaGCTGATAGCAATCTGCATGACTCCAGCGCCAATGTTCCGAAAT +
Preference number: 5 (lower is better)
Translates to: VFSVPSAPQEKSRLS*LIAICMTPAPMFRN
Trigger: ATTTCGGAACATTGGCGCTGGAGTCATGCAGATTGCTATCAGCCAGGACAATCGGCTCTTCTCCTGTGGCGCAGACGGCACGCTGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 90 bp CTTGTCCATGTCCTCAGAGGCCACAGGAGGTGCTGCGATACTTTCTaGTTGCCTCCGAGGCTTCACAACAAGTTTTACACCCCCTCCGAA +
Preference number: 5 (lower is better)
Translates to: LVHVLRGHRRCCDTF*LPPRLHNKFYTPSE
Trigger: TTCGGAGGGGGTGTAAAACTTGTTGTGAAGCCTCGGAGGCAATCAGAAAGTATCGCAGCACCTCCTGTGGCCTCTGAGGACATGGACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 90 bp CAGCGTTTCAATCTTCCGGTCCAGCAGTACTGTAGGCAGTGGCATTaGGATGCTAGGTCGTGGATGGGTTCTAGGACTTCCCTCTCGTTC +
Preference number: 5 (lower is better)
Translates to: QRFNLPVQQYCRQWH*DARSWMGSRTSLSF
Trigger: GAACGAGAGGGAAGTCCTAGAACCCATCCACGACCTAGCATCTCAATGCCACTGCCTACAGTACTGCTGGACCGGAAGATTGAAACGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CCA 90 bp CTTGCTGAAAGCAGAGGCAACGTGGTAGGTAGTGGCAGTGGGGACTaGAGCTGCTTCACTGTAGTTTCCTGCTGTGACTCTTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: LAESRGNVVGSGSGD*SCFTVVSCCDSCSK
Trigger: TTTGCTGCAAGAGTCACAGCAGGAAACTACAGTGAAGCAGCTCCAGTCCCCACTGCCACTACCTACCACGTTGCCTCTGCTTTCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGAATCTCCTGCGGTGCTaGTCCATGTCCTCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRNLLRC*SMSSEA
Trigger: GGCCTCTGAGGACATGGACAAGCACCGCAGGAGATT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 90 bp TTCATTACTAAGCCACCGCCATCATCCTCTTCTAAGGCACCGTCATaGTCGTCACCCCAATCGAGCCTAAGAGGCTCCTCGTCAACTGTA +
Preference number: 5 (lower is better)
Translates to: FITKPPPSSSSKAPS*SSPQSSLRGSSSTV
Trigger: TACAGTTGACGAGGAGCCTCTTAGGCTCGATTGGGGTGACGATCATGACGGTGCCTTAGAAGAGGATGATGGCGGTGGCTTAGTAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 90 bp CAGGAGCTGAGTTTGGTGTTGCATGCTCTTCGATGCTTTCTGTCCTaGGGCGTCGTCGATCACTTAGAAGAAGCCCTTGATAGGCCATTC +
Preference number: 5 (lower is better)
Translates to: QELSLVLHALRCFLS*GVVDHLEEALDRPF
Trigger: GAATGGCCTATCAAGGGCTTCTTCTAAGTGATCGACGACGCCTCAGGACAGAAAGCATCGAAGAGCATGCAACACCAAACTCAGCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 90 bp GTATCCTTTGCTGTACTGCCGCTCACACTAATGGTCCGAGAGAGATaGCGCTTAGTTCCTTCTCCAGCATCAGGATCCCGAACTATTGCA +
Preference number: 5 (lower is better)
Translates to: VSFAVLPLTLMVRER*RLVPSPASGSRTIA
Trigger: TGCAATAGTTCGGGATCCTGATGCTGGAGAAGGAACTAAGCGGCATCTCTCTCGGACCATTAGTGTGAGCGGCAGTACAGCAAAGGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS GCA 90 bp AGGAGATCTTGGTTTTTCTGCAACCACAGCTTTCGTCTTTCTGCATaGTCCCTTTTAGCCTGCAGCCGTCGTCGTTCTATTTGGTGGCGC +
Preference number: 5 (lower is better)
Translates to: RRSWFFCNHSFRLSA*SLLACSRRRSIWWR
Trigger: GCGCCACCAAATAGAACGACGACGGCTGCAGGCTAAAAGGGAGCATGCAGAAAGACGAAAGCTGTGGTTGCAGAAAAACCAAGATCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 90 bp CCATGCTGGTTGGAGCATTCCACACAACTGACTTGGATGTTCCCATaGTTAGCACCAGGGATGATCTGCACACATTCAAAGTCACTCGCC +
Preference number: 5 (lower is better)
Translates to: PCWLEHSTQLTWMFP*LAPGMICTHSKSLA
Trigger: GGCGAGTGACTTTGAATGTGTGCAGATCATCCCTGGTGCTAAGCATGGGAACATCCAAGTCAGTTGTGTGGAATGCTCCAACCAGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS CCA 90 bp GCTGCAACTCTCCCATGCTGGTTGGAGCATTCCACACAACTGACTTaGATGTTCCCATGCTTAGCACCAGGGATGATCTGCACACATTCA +
Preference number: 5 (lower is better)
Translates to: AATLPCWLEHSTQLT*MFPCLAPGMICTHS
Trigger: TGAATGTGTGCAGATCATCCCTGGTGCTAAGCATGGGAACATCCAAGTCAGTTGTGTGGAATGCTCCAACCAGCATGGGAGAGTTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCGCAGGTAGACACTCCTaGGTGAAGGAGCTGGACTCG +
Preference number: 5 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLAGRHS*VKELDS
Trigger: CGAGTCCAGCTCCTTCACCAAGGAGTGTCTACCTGC...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTTCCTGGCCAGCCTTCTaGGCATCTGTAGTTTTCATT +
Preference number: 5 (lower is better)
Translates to: KLSRENQSGQACSQLGRVSWPAF*ASVVFI
Trigger: AATGAAAACTACAGATGCCAAGAAGGCTGGCCAGGA...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS TCA 90 bp CAGGCCATGGCCTGTCAATCTCCATACTTTTATATTGCCCTCTGCTaGGCCTGTAGTGAAGTACTCCTCACACGAATCCAGAGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: QAMACQSPYFYIALC*ACSEVLLTRIQSQS
Trigger: GCTTTGGCTCTGGATTCGTGTGAGGAGTACTTCACTACAGGCTCAGCAGAGGGCAATATAAAAGTATGGAGATTGACAGGCCATGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 90 bp ATTACAGACAGAGCCCCTGGGCATATACTTGCTAGTTTTCCGCCATaGGAAACCTGTCACGGCTCGAGGGTGTGCCAAGTAAACAAAGGA +
Preference number: 5 (lower is better)
Translates to: ITDRAPGHILASFPP*ETCHGSRVCQVNKG
Trigger: TCCTTTGTTTACTTGGCACACCCTCGAGCCGTGACAGGTTTCTCATGGCGGAAAACTAGCAAGTATATGCCCAGGGGCTCTGTCTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 90 bp GGTATAATCCCGAGTACCATCCTTCCCAATGGTAACTGTATCCTTTaGTGTACTGCCGCTCACACTAATGGTCCGAGAGAGATGCCGCTT +
Preference number: 5 (lower is better)
Translates to: GIIPSTILPNGNCIL*CTAAHTNGPREMPL
Trigger: AAGCGGCATCTCTCTCGGACCATTAGTGTGAGCGGCAGTACAGCAAAGGATACAGTTACCATTGGGAAGGATGGTACTCGGGATTATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS GCA 90 bp CTGCCTCAGATTCTCTATCCAGAGATAATTCATGGTCCAGTTTCATaGGTAAGCCCCTCTCTCTCTCGTCCTGTGAGCGCTCCTCATCTT +
Preference number: 5 (lower is better)
Translates to: LPQILYPEIIHGPVS*VSPSLSRPVSAPHL
Trigger: AAGATGAGGAGCGCTCACAGGACGAGAGAGAGAGGGGCTTACGCATGAAACTGGACCATGAATTATCTCTGGATAGAGAATCTGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CCA 90 bp TCCAGCAGTACTGTAGGCAGTGGCATTGAGATGCTAGGTCGTGGATaGGTTCTAGGACTTCCCTCTCGTTCTCCATCTTCATGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: SSSTVGSGIEMLGRG*VLGLPSRSPSSCSD
Trigger: ATCAGAACATGAAGATGGAGAACGAGAGGGAAGTCCTAGAACCCATCCACGACCTAGCATCTCAATGCCACTGCCTACAGTACTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS-3UTR CAA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGGACAGAATGCTTCCATaGGGCATATACATGCATTTC +
Preference number: 5 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRDRMLP*GIYMHF
Trigger: GAAATGCATGTATATGCCCAATGGAAGCATTCTGTC...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGCAGGTAGACACTCCTaGGTGAAGGAGCTGGACTCG +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEAGRHS*VKELDS
Trigger: CGAGTCCAGCTCCTTCACCAAGGAGTGTCTACCTGC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAAATCTCCTGCGGTGCTaGTCCATGTCCTCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVENLLRC*SMSSEA
Trigger: GGCCTCTGAGGACATGGACAAGCACCGCAGGAGATT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAGGATTCGATGCAGTTaGGTTAACTTGCCAGATACT +
Preference number: 5 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRRIRCS*VNLPDT
Trigger: AGTATCTGGCAAGTTAACCAAACTGCATCGAATCCT...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAGGCATACGTTTCTATaGTCATTGGAATGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRRHTFL*SLECPE
Trigger: CTCTGGACATTCCAATGACAATAGAAACGTATGCCT...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTTGCTTGGGGGCATATaGGAGTACTGTGGCACCATG +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRLLGGI*EYCGTM
Trigger: CATGGTGCCACAGTACTCCAATATGCCCCCAAGCAA...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGCAGGAGAAGAGCCGATaGTCCTGGCTGATAGCAATC +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRQEKSR*SWLIAI
Trigger: GATTGCTATCAGCCAGGACAATCGGCTCTTCTCCTG...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGCCCCTGGGCATATACTaGCTAGTTTTCCGCCATGAG +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRPLGIY*LVFRHE
Trigger: CTCATGGCGGAAAACTAGCAAGTATATGCCCAGGGG...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGTGGTAAAGGCTGACTaGTCAGCAAACGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRVVKAD*SANVTA
Trigger: GGCAGTCACGTTTGCTGACAAGTCAGCCTTTACCAC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 90 bp GGAAGCCCGTCTCCTCTTCACTTCATGGGGATCTTGAGGTATGATTaGAGACTTCCAGCCAGTCATAGGGTACCAGACTTTCAGAAGACA +
Preference number: 5 (lower is better)
Translates to: GSPSPLHFMGILRYD*RLPASHRVPDFQKT
Trigger: TGTCTTCTGAAAGTCTGGTACCCTATGACTGGCTGGAAGTCTTCAATCATACCTCAAGATCCCCATGAAGTGAAGAGGAGACGGGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 90 bp GAGATGCCGCTTAGTTCCTTCTCCAGCATCAGGATCCCGAACTATTaGAACTTCACCTGCGATGCACTTTACCAAATGGGAAAGAATGGC +
Preference number: 5 (lower is better)
Translates to: EMPLSSFSSIRIPNY*NFTCDALYQMGKNG
Trigger: GCCATTCTTTCCCATTTGGTAAAGTGCATCGCAGGTGAAGTTGCAATAGTTCGGGATCCTGATGCTGGAGAAGGAACTAAGCGGCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS GCA 90 bp GGCCTTACTGTGGCACTGCCAACTCATGTACGGTTTAGGATTCGATaGAGTTTGGTTAACTTGCCAGATACTCAGAAAACCCTCTCCGTC +
Preference number: 5 (lower is better)
Translates to: GLTVALPTHVRFRIR*SLVNLPDTQKTLSV
Trigger: GACGGAGAGGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCATCGAATCCTAAACCGTACATGAGTTGGCAGTGCCACAGTAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 90 bp CTCTTCCTGAGTAGTTCTTATCCCTGTTTTCATCAAGCTCCGTACTaGTGGTTGCCACAGTATCCGCCAGTGCTACAAGGAACATCTGCT +
Preference number: 5 (lower is better)
Translates to: LFLSSSYPCFHQAPY*WLPQYPPVLQGTSA
Trigger: AGCAGATGTTCCTTGTAGCACTGGCGGATACTGTGGCAACCACCAGTACGGAGCTTGATGAAAACAGGGATAAGAACTACTCAGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 90 bp GATGATCCTGTACCTGCCTCAGATTCTCTATCCAGAGATAATTCATaGTCCAGTTTCATGCGTAAGCCCCTCTCTCTCTCGTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: DDPVPASDSLSRDNS*SSFMRKPLSLSSCE
Trigger: CTCACAGGACGAGAGAGAGAGGGGCTTACGCATGAAACTGGACCATGAATTATCTCTGGATAGAGAATCTGAGGCAGGTACAGGATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS-3UTR CAA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAACGAGCAGTGGACTGTaGGCTCACAATGTTAAACAC +
Preference number: 5 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASTSSGL*AHNVKH
Trigger: GTGTTTAACATTGTGAGCCAACAGTCCACTGCTCGT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GGAGAACAAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGATTGCTGGAATCATATaGATCAGTTCTTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GEQTQQGESEWPGLLTVRIAGII*ISSSSA
Trigger: AGCTGAGGAAGAACTGATCAATATGATTCCAGCAAT...CCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTTGTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCATCTTGCATTGCCAGCTaGACGGAAACAGACAAGTTG +
Preference number: 5 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASSCIAS*TETDKL
Trigger: CAACTTGTCTGTTTCCGTCAAGCTGGCAATGCAAGA...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 90 bp TCTTCAGGTAACAATGTTTCTGCCCAGAGCCGACACACACCATCATaGCATGAAGTCAGTAAGACATTACAGACAGAGCCCCTGGGCATA +
Preference number: 5 (lower is better)
Translates to: SSGNNVSAQSRHTPS*HEVSKTLQTEPLGI
Trigger: TATGCCCAGGGGCTCTGTCTGTAATGTCTTACTGACTTCATGTCATGATGGTGTGTGTCGGCTCTGGGCAGAAACATTGTTACCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS TCA 90 bp GGCGTCGTCGATCACTTAGAAGAAGCCCTTGATAGGCCATTCCTGTaGACTGATTTCCTTCCGACTGACTGTAGCTATGACTGTCACATA +
Preference number: 5 (lower is better)
Translates to: GVVDHLEEALDRPFL*TDFLPTDCSYDCHI
Trigger: TATGTGACAGTCATAGCTACAGTCAGTCGGAAGGAAATCAGTTCACAGGAATGGCCTATCAAGGGCTTCTTCTAAGTGATCGACGACGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118600.8
CDS CCA 90 bp GGCGTTGCTCTTATTACTTCAACAGCTTCCGGCAGATCCAGGGGCTaGCTATATACAAGTCTGGAGCTCAGAATAAGCTTACTAGCAGTT +
Preference number: 5 (lower is better)
Translates to: GVALITSTASGRSRG*LYTSLELRISLLAV
Trigger: AACTGCTAGTAAGCTTATTCTGAGCTCCAGACTTGTATATAGCCAGCCCCTGGATCTGCCGGAAGCTGTTGAAGTAATAAGAGCAACGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CCA 90 bp CTGTGGCACTGCCAACTCATGTACGGTTTAGGATTCGATGCAGTTTaGTTAACTTGCCAGATACTCAGAAAACCCTCTCCGTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: LWHCQLMYGLGFDAV*LTCQILRKPSPSAT
Trigger: TGTTGCAGACGGAGAGGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCATCGAATCCTAAACCGTACATGAGTTGGCAGTGCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGAGCCATCTTCTTTaGACACCCAGTCCAAATGTA +
Preference number: 5 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASESHLL*TPSPNV
Trigger: TACATTTGGACTGGGTGTCAAAAGAAGATGGCTCTC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACTCAGCAGGGAGAATCAGAGTGGCCAGGCCTGCTCACAGTTAGGAAGGGTTACTCCATCCTTACTGTaGGTTTGGTCACTTACAATT +
Preference number: 5 (lower is better)
Translates to: KLSRENQSGQACSQLGRVTPSLL*VWSLTI
Trigger: AATTGTAAGTGACCAAACCAACAGTAAGGATGGAGT...AACCCTTCCTAACTGTGAGCAGGCCTGGCCACTCTGATTCTCCCTGCTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCACAGGATCCCGAACTATaGCAACTTCACCTGCGATGC +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISQDPEL*QLHLRC
Trigger: GCATCGCAGGTGAAGTTGCAATAGTTCGGGATCCTG...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTCAGGATCCCGAACTATaGCAACTTCACCTGCGATGC +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTQDPEL*QLHLRC
Trigger: GCATCGCAGGTGAAGTTGCAATAGTTCGGGATCCTG...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGCTGAGGGTCCCCTCTTaGGATTGCTGGAATCATATT +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRLRVPS*DCWNHI
Trigger: AATATGATTCCAGCAATCCAAAGAGGGGACCCTCAG...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTCCTGGCCAGCCTTCTaGGCATCTGTAGTTTTCATT +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRSWPAF*ASVVFI
Trigger: AATGAAAACTACAGATGCCAAGAAGGCTGGCCAGGA...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCATACTCTCAGGAGATCTaGGTTTTTCTGCAACCACAG +
Preference number: 5 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASYSQEI*VFLQPQ
Trigger: CTGTGGTTGCAGAAAAACCAAGATCTCCTGAGAGTA...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAATTGCTTGGGGGCATATaGGAGTACTGTGGCACCATG +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVELLGGI*EYCGTM
Trigger: CATGGTGCCACAGTACTCCAATATGCCCCCAAGCAA...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAATTAGGAGTTGTTGCTaGGGGGCATATTGGAGTACT +
Preference number: 5 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASIRSCC*GAYWST
Trigger: AGTACTCCAATATGCCCCCAAGCAACAACTCCTAAT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACCCCTGGGCATATACTaGCTAGTTTTCCGCCATGAG +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEPLGIY*LVFRHE
Trigger: CTCATGGCGGAAAACTAGCAAGTATATGCCCAGGGG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTGCTGGATCCTGTCTTaGTGTTTCCCAGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLCWILS*CFPAEE
Trigger: CTCTTCTGCTGGGAAACACAAAGACAGGATCCAGCA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCACAGACACTGAGGTTTaGCACTGCCAGATGCACTTC +
Preference number: 5 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLTDTEV*HCQMHF
Trigger: GAAGTGCATCTGGCAGTGCAAAACCTCAGTGTCTGT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 90 bp TCTGGAGCTCAGAATAAGCTTACTAGCAGTTTGAAGATTGGCAATTaGCGAGGAATGTGGCACGGAGCTCATACTAGAGGAGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SGAQNKLTSSLKIGN*RGMWHGAHTRGGFW
Trigger: CCAGAAACCTCCTCTAGTATGAGCTCCGTGCCACATTCCTCGTCAATTGCCAATCTTCAAACTGCTAGTAAGCTTATTCTGAGCTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CCA 90 bp ATGGCATCAAGCTCAATAATGCAGCCTGGACGAGCAGTGGACTGTTaGCTCACAATGTTAAACACTTCTCCGATCAGTTTTGAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: MASSSIMQPGRAVDC*LTMLNTSPISFEAS
Trigger: AGAAGCCTCAAAACTGATCGGAGAAGTGTTTAACATTGTGAGCCAACAGTCCACTGCTCGTCCAGGCTGCATTATTGAGCTTGATGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAATTGTGGTGGATGGGTaGCTTGTAAGCCACTGCAAG +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEIVVDG*LVSHCK
Trigger: CTTGCAGTGGCTTACAAGCAACCCATCCACCACAAT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTATTGTGGTGGATGGGTaGCTTGTAAGCCACTGCAAG +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTIVVDG*LVSHCK
Trigger: CTTGCAGTGGCTTACAAGCAACCCATCCACCACAAT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAAGCTCTGTGGCTTTTTaGTACTGTCCTCTGAAATTC +
Preference number: 5 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASSSVAF*YCPLKF
Trigger: GAATTTCAGAGGACAGTACAAAAAAGCCACAGAGCT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGCTCGTCATCTTCCTTaGGTGTCTGTTCCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTARHLP*VSVPVR
Trigger: CCTTACTGGAACAGACACCAAAGGAAGATGACGAGC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGCCGTCGTCGTTCTATTaGGTGGCGCTCATAGGAACC +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERPSSFY*VALIGT
Trigger: GGTTCCTATGAGCGCCACCAAATAGAACGACGACGG...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAACAGAACATTCAATTTaGGCTGGTCTTCATCTTGGG +
Preference number: 5 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASTEHSI*AGLHLG
Trigger: CCCAAGATGAAGACCAGCCAAAATTGAATGTTCTGT...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCATGCTGGATCCTGTCTTaGTGTTTCCCAGCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISCWILS*CFPAEE
Trigger: CTCTTCTGCTGGGAAACACAAAGACAGGATCCAGCA...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCAAGCACTTGCAGAATaGCAGTATGTGCCAAGACAG +
Preference number: 5 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLQALAE*QYVPRQ
Trigger: CTGTCTTGGCACATACTGCAATTCTGCAAGTGCTTG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTTCCACACAACTGACTaGGATGTTCCCATGCTTAGC +
Preference number: 5 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLFHTTD*DVPMLS
Trigger: GCTAAGCATGGGAACATCCAAGTCAGTTGTGTGGAA...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGCTGAATCGAATCCGTaGCTGTCAGCAATCTGTTAT +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRAESNP*LSAICY
Trigger: ATAACAGATTGCTGACAGCAACGGATTCGATTCAGC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAACAGACACTGAGGTTTaGCACTGCCAGATGCACTTC +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISTDTEV*HCQMHF
Trigger: GAAGTGCATCTGGCAGTGCAAAACCTCAGTGTCTGT...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 90 bp CTCCCATACATGAAGATATTAGCACCAACCCCCACTGTGAGGATGTaGGAGCCATCTTCTTTTGACACCCAGTCCAAATGTACTAAATGC +
Preference number: 5 (lower is better)
Translates to: LPYMKILAPTPTVRM*EPSSFDTQSKCTKC
Trigger: GCATTTAGTACATTTGGACTGGGTGTCAAAAGAAGATGGCTCTCACATCCTCACAGTGGGGGTTGGTGCTAATATCTTCATGTATGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS TCA 90 bp ATTCAGACCACTGAGGGTCCCCTCTTTGGATTGCTGGAATCATATTaGTCAGTTCTTCCTCAGCTTCAGAATGAAAAGCCCAGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: IQTTEGPLFGLLESY*SVLPQLQNEKPRQS
Trigger: ACTTTGCCTGGGCTTTTCATTCTGAAGCTGAGGAAGAACTGATCAATATGATTCCAGCAATCCAAAGAGGGGACCCTCAGTGGTCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCCTTCTCCGATCAGTTTaGAGGCTTCTGGGTCTGACA +
Preference number: 5 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFLLRSV*RLLGLT
Trigger: TGTCAGACCCAGAAGCCTCAAAACTGATCGGAGAAG...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAACGAGCAGTGGACTGTaGGCTCACAATGTTAAACAC +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISTSSGL*AHNVKH
Trigger: GTGTTTAACATTGTGAGCCAACAGTCCACTGCTCGT...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGACCTGCTGAAGGCGTaGCTCTTATTACTTCAACAG +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISDLLKA*LLLLQQ
Trigger: CTGTTGAAGTAATAAGAGCAACGCCTTCAGCAGGTC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGGCACACTGGGTAAATaGAAGAGGAACTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTGTLGK*KRNSDD
Trigger: GTCATCTGAGTTCCTCTTCAATTTACCCAGTGTGCC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCCAGAAGCGTACTTTATaGTCGGAGCAAGTTGTAACC +
Preference number: 5 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLQKRTL*SEQVVT
Trigger: GGTTACAACTTGCTCCGACAATAAAGTACGCTTCTG...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTATTGTGGTGGATGGGTaGCTTGTAAGCCACTGCAAG +
Preference number: 5 (lower is better)
Translates to: NVSQQCFLPPFGIKALLIIVVDG*LVSHCK
Trigger: CTTGCAGTGGCTTACAAGCAACCCATCCACCACAAT...AATGAGCAGGGCCTTTATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGACAGAATGCTTCCATaGGGCATATACATGCATTTC +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRDRMLP*GIYMHF
Trigger: GAAATGCATGTATATGCCCAATGGAAGCATTCTGTC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCACTGAGGGTCCCCTCTTaGGATTGCTGGAATCATATT +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISLRVPS*DCWNHI
Trigger: AATATGATTCCAGCAATCCAAAGAGGGGACCCTCAG...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGCCGTCGTCGTTCTATTaGGTGGCGCTCATAGGAACC +
Preference number: 5 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWPSSFY*VALIGT
Trigger: GGTTCCTATGAGCGCCACCAAATAGAACGACGACGG...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGAGCTGAGTTTGGTGTaGCATGCTCTTCGATGCTTT +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEELSLV*HALRCF
Trigger: AAAGCATCGAAGAGCATGCAACACCAAACTCAGCTC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGAGCTGAGTTTGGTGTaGCATGCTCTTCGATGCTTT +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISELSLV*HALRCF
Trigger: AAAGCATCGAAGAGCATGCAACACCAAACTCAGCTC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAATGGCTGGTCTTCATCTaGGGCAGAACTCAAGAGATT +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEWLVFI*GRTQEI
Trigger: AATCTCTTGAGTTCTGCCCAAGATGAAGACCAGCCA...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGACAGAACATTCAATTTaGGCTGGTCTTCATCTTGGG +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRTEHSI*AGLHLG
Trigger: CCCAAGATGAAGACCAGCCAAAATTGAATGTTCTGT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGCAGTTTGGTTAACTaGCCAGATACTCAGAAAACC +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRCSLVN*PDTQKT
Trigger: GGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCA...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGCAGGAGAAGAGCCGATaGTCCTGGCTGATAGCAATC +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERQEKSR*SWLIAI
Trigger: GATTGCTATCAGCCAGGACAATCGGCTCTTCTCCTG...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACATGAAATGTACGGGTaGCTGCATTTCTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEHEMYG*LHFSEA
Trigger: AGCCTCTGAGAAATGCAGCAACCCGTACATTTCATG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCACAAGCACTTGCAGAATaGCAGTATGTGCCAAGACAG +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISQALAE*QYVPRQ
Trigger: CTGTCTTGGCACATACTGCAATTCTGCAAGTGCTTG...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAGGGTCCCATGCTAAGTaGTATGTCACGGAACTCAAA +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEGSHAK*YVTELK
Trigger: TTTGAGTTCCGTGACATACAACTTAGCATGGGACCC...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 90 bp GACAGCTACTCCATCCTTACTGTTGGTTTGGTCACTTACAATTCCTaGAAGTCTCCCATACATGAAGATATTAGCACCAACCCCCACTGT +
Preference number: 5 (lower is better)
Translates to: DSYSILTVGLVTYNS*KSPIHEDISTNPHC
Trigger: ACAGTGGGGGTTGGTGCTAATATCTTCATGTATGGGAGACTTTCAGGAATTGTAAGTGACCAAACCAACAGTAAGGATGGAGTAGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS TCA 90 bp AGAACAGTGGTAAAGGCTGACTTGTCAGCAAACGTGACTGCCCACTaGTTCAAAGACCCATCTATGTGTTTAGAGACCATCATTACCGTA +
Preference number: 5 (lower is better)
Translates to: RTVVKADLSANVTAH*FKDPSMCLETIITV
Trigger: TACGGTAATGATGGTCTCTAAACACATAGATGGGTCTTTGAATCAGTGGGCAGTCACGTTTGCTGACAAGTCAGCCTTTACCACTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 90 bp GAGTGTAGCTGTGATCCATGGGGACTATCTACAGACATCATCTCTTaGTGGGATGGGTTGTATGAATCTTTTGTAGCATTCACACAAGCA +
Preference number: 5 (lower is better)
Translates to: ECSCDPWGLSTDIIS*WDGLYESFVAFTQA
Trigger: TGCTTGTGTGAATGCTACAAAAGATTCATACAACCCATCCCAGCAAGAGATGATGTCTGTAGATAGTCCCCATGGATCACAGCTACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 90 bp TCGACCTTGATGTGGCAATCTTCTGCTACGGAGTTGTGTTTGACCTaGTCCACATGTTCTTCTACAGACTCACTCTGCTTTCTTTTCTTA +
Preference number: 5 (lower is better)
Translates to: STLMWQSSATELCLT*STCSSTDSLCFLFL
Trigger: TAAGAAAAGAAAGCAGAGTGAGTCTGTAGAAGAACATGTGGAGCAGGTCAAACACAACTCCGTAGCAGAAGATTGCCACATCAAGGTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS CCA 90 bp GGATCCCGAACTATTGCAACTTCACCTGCGATGCACTTTACCAAATaGGAAAGAATGGCCTTAGCTCTTCTAACTTTCCCTAAGTCCATT +
Preference number: 5 (lower is better)
Translates to: GSRTIATSPAMHFTK*ERMALALLTFPKSI
Trigger: AATGGACTTAGGGAAAGTTAGAAGAGCTAAGGCCATTCTTTCCCATTTGGTAAAGTGCATCGCAGGTGAAGTTGCAATAGTTCGGGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGCTTCTCCGATCAGTTTaGAGGCTTCTGGGTCTGACA +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERLLRSV*RLLGLT
Trigger: TGTCAGACCCAGAAGCCTCAAAACTGATCGGAGAAG...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTCAGAAGCGTACTTTATaGTCGGAGCAAGTTGTAACC +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTQKRTL*SEQVVT
Trigger: GGTTACAACTTGCTCCGACAATAAAGTACGCTTCTG...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGAGAGCCATCTTCTTTaGACACCCAGTCCAAATGTA +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISESHLL*TPSPNV
Trigger: TACATTTGGACTGGGTGTCAAAAGAAGATGGCTCTC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGACTTAACTCCTTGCTaGATACTACCACCTAGTGGT +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTDLTPC*ILPPSG
Trigger: ACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTC...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGACTTAACTCCTTGCTaGATACTACCACCTAGTGGT +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISDLTPC*ILPPSG
Trigger: ACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGCAGAGTGATCTTGTATaGTCTCTTCAACTGGACTAT +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRQSDLV*SLQLDY
Trigger: ATAGTCCAGTTGAAGAGACAATACAAGATCACTCTG...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTAAGGGCAGAGTGATCTaGTATTGTCTCTTCAACTGG +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTKGRVI*YCLFNW
Trigger: CCAGTTGAAGAGACAATACAAGATCACTCTGCCCTT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTATTCTAACAGCTGAGTaGGATGATACTGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTILTAE*DDTVAE
Trigger: CTCTGCCACAGTATCATCCAACTCAGCTGTTAGAAT...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTCAGGATCCCGAACTATaGCAACTTCACCTGCGATGC +
Preference number: 5 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTQDPEL*QLHLRC
Trigger: GCATCGCAGGTGAAGTTGCAATAGTTCGGGATCCTG...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGATTGCTGGAATCATATaGATCAGTTCTTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRIAGII*ISSSSA
Trigger: AGCTGAGGAAGAACTGATCAATATGATTCCAGCAAT...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTCCTGCTCACTGGTTTaGATTCTGATGGCCCGTTCT +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERSCSLV*ILMARS
Trigger: AGAACGGGCCATCAGAATCAAAACCAGTGAGCAGGA...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCTCCTGGCCAGCCTTCTaGGCATCTGTAGTTTTCATT +
Preference number: 5 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFSWPAF*ASVVFI
Trigger: AATGAAAACTACAGATGCCAAGAAGGCTGGCCAGGA...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTTACTCTCAGGAGATCTaGGTTTTTCTGCAACCACAG +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTYSQEI*VFLQPQ
Trigger: CTGTGGTTGCAGAAAAACCAAGATCTCCTGAGAGTA...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTACCAGCATCCTCATGTaGAATCTCCTGCGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTTSILM*NLLRCL
Trigger: CAAGCACCGCAGGAGATTCAACATGAGGATGCTGGT...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGCACTCTACCAACCTGGGTAGGCAACACTCAGAGTAAAACCCAGCTTGCATCAGCAACACCACACTTGTaGCCTTGTGAATTAAAATAT +
Preference number: 5 (lower is better)
Translates to: CTLPTWVGNTQSKTQLASATPHL*PCELKY
Trigger: ATATTTTAATTCACAAGGCAACAAGTGTGGTGTTGC...TGATGCAAGCTGGGTTTTACTCTGAGTGTTGCCTACCCAGGTTGGTAGAGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCAGGATTCGATGCAGTTaGGTTAACTTGCCAGATACT +
Preference number: 5 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLRIRCS*VNLPDT
Trigger: AGTATCTGGCAAGTTAACCAAACTGCATCGAATCCT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGTTGCTTGGGGGCATATaGGAGTACTGTGGCACCATG +
Preference number: 5 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWLLGGI*EYCGTM
Trigger: CATGGTGCCACAGTACTCCAATATGCCCCCAAGCAA...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAATTAGGAGTTGTTGCTaGGGGGCATATTGGAGTACT +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEIRSCC*GAYWST
Trigger: AGTACTCCAATATGCCCCCAAGCAACAACTCCTAAT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTCAGGAGAAGAGCCGATaGTCCTGGCTGATAGCAATC +
Preference number: 5 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTQEKSR*SWLIAI
Trigger: GATTGCTATCAGCCAGGACAATCGGCTCTTCTCCTG...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTTTTTTACTAAGAGAGTaGGCGTCCCCAGAGGGAAAT +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTFLLRE*ASPEGN
Trigger: ATTTCCCTCTGGGGACGCCAACTCTCTTAGTAAAAA...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTCAACAAAGCAAGCACTaGCAGAATTGCAGTATGTGC +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTQQSKH*QNCSMC
Trigger: GCACATACTGCAATTCTGCAAGTGCTTGCTTTGTTG...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTACTCTCCCATGCTGGTaGGAGCATTCCACACAACTG +
Preference number: 5 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTTLPCW*EHSTQL
Trigger: CAGTTGTGTGGAATGCTCCAACCAGCATGGGAGAGT...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CAA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCAGATCAGCTTCGACCTaGATGTGGCAATCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFRSAST*MWQSSA
Trigger: AGCAGAAGATTGCCACATCAAGGTCGAAGCTGATCT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS TCA 90 bp TGGCTATATACAAGTCTGGAGCTCAGAATAAGCTTACTAGCAGTTTaGAGATTGGCAATTGACGAGGAATGTGGCACGGAGCTCATACTA +
Preference number: 5 (lower is better)
Translates to: WLYTSLELRISLLAV*RLAIDEECGTELIL
Trigger: TAGTATGAGCTCCGTGCCACATTCCTCGTCAATTGCCAATCTTCAAACTGCTAGTAAGCTTATTCTGAGCTCCAGACTTGTATATAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS TCA 90 bp ACTTTACATGCCACACTAGAAAAGTTCCATCTACAGGGTGTATCGTaGATAACATGTCAGGGTTCTTGTTCCACTCTGTCAGCAGCGTTT +
Preference number: 5 (lower is better)
Translates to: TLHATLEKFHLQGVS*ITCQGSCSTLSAAF
Trigger: AAACGCTGCTGACAGAGTGGAACAAGAACCCTGACATGTTATTCACGATACACCCTGTAGATGGAACTTTTCTAGTGTGGCATGTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CCA 90 bp TGTAGCTGTGATCCATGGGGACTATCTACAGACATCATCTCTTGCTaGGATGGGTTGTATGAATCTTTTGTAGCATTCACACAAGCATAC +
Preference number: 5 (lower is better)
Translates to: CSCDPWGLSTDIISC*DGLYESFVAFTQAY
Trigger: GTATGCTTGTGTGAATGCTACAAAAGATTCATACAACCCATCCCAGCAAGAGATGATGTCTGTAGATAGTCCCCATGGATCACAGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGGACCTGCTGAAGGCGTaGCTCTTATTACTTCAACAG +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERDLLKA*LLLLQQ
Trigger: CTGTTGAAGTAATAAGAGCAACGCCTTCAGCAGGTC...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAGACAGAATGCTTCCATaGGGCATATACATGCATTTC +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISDRMLP*GIYMHF
Trigger: GAAATGCATGTATATGCCCAATGGAAGCATTCTGTC...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATACTGAGGGTCCCCTCTTaGGATTGCTGGAATCATATT +
Preference number: 5 (lower is better)
Translates to: ENRKENVSQQCFLPPFGILRVPS*DCWNHI
Trigger: AATATGATTCCAGCAATCCAAAGAGGGGACCCTCAG...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGTCCTGCTCACTGGTTTaGATTCTGATGGCCCGTTCT +
Preference number: 5 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWSCSLV*ILMARS
Trigger: AGAACGGGCCATCAGAATCAAAACCAGTGAGCAGGA...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCATAACTGATTCATGGTaGCATATCTCATGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLITDSW*HISCKA
Trigger: TGCCTTGCATGAGATATGCAACCATGAATCAGTTAT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTGAGCTGAGTTTGGTGTaGCATGCTCTTCGATGCTTT +
Preference number: 5 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAELSLV*HALRCF
Trigger: AAAGCATCGAAGAGCATGCAACACCAAACTCAGCTC...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGGCAACACCACACTTGTaGCCTTGTGAATTAAAATAT +
Preference number: 5 (lower is better)
Translates to: PSLHQSQIPQRLSLLISRATPHL*PCELKY
Trigger: ATATTTTAATTCACAAGGCAACAAGTGTGGTGTTGC...CCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTACTCTCCCATGCTGGTaGGAGCATTCCACACAACTG +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGTLPCW*EHSTQL
Trigger: CAGTTGTGTGGAATGCTCCAACCAGCATGGGAGAGT...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAACCACTGACACTTGAGTaGACTGTTTCTCTTATGAGA +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEPLTLE*TVSLMR
Trigger: TCTCATAAGAGAAACAGTCAACTCAAGTGTCAGTGG...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGGGGTCCCATGCTAAGTaGTATGTCACGGAACTCAAA +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERGSHAK*YVTELK
Trigger: TTTGAGTTCCGTGACATACAACTTAGCATGGGACCC...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCGCTGAATCGAATCCGTaGCTGTCAGCAATCTGTTAT +
Preference number: 5 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFAESNP*LSAICY
Trigger: ATAACAGATTGCTGACAGCAACGGATTCGATTCAGC...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 90 bp ATGTTCCGAAATATGGACTGCTTAGCATGCTCGCTCTTAAATGAATaGATCAGGCCATGGCCTGTCAATCTCCATACTTTTATATTGCCC +
Preference number: 5 (lower is better)
Translates to: MFRNMDCLACSLLNE*IRPWPVNLHTFILP
Trigger: GGGCAATATAAAAGTATGGAGATTGACAGGCCATGGCCTGATTCATTCATTTAAGAGCGAGCATGCTAAGCAGTCCATATTTCGGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAGAGAGCCATCTTCTTTaGACACCCAGTCCAAATGTA +
Preference number: 5 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIESHLL*TPSPNV
Trigger: TACATTTGGACTGGGTGTCAAAAGAAGATGGCTCTC...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGGACTTAACTCCTTGCTaGATACTACCACCTAGTGGT +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERDLTPC*ILPPSG
Trigger: ACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTC...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTTCAACGTTTCCAAATTaGACAGAATGCTTCCATTGG +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTSTFPN*TECFHW
Trigger: CCAATGGAAGCATTCTGTCAAATTTGGAAACGTTGA...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCACAGAGTGATCTTGTATaGTCTCTTCAACTGGACTAT +
Preference number: 5 (lower is better)
Translates to: KPSLHQSQIPQRLSLLISQSDLV*SLQLDY
Trigger: ATAGTCCAGTTGAAGAGACAATACAAGATCACTCTG...TGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAAAGGGCAGAGTGATCTaGTATTGTCTCTTCAACTGG +
Preference number: 5 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIKGRVI*YCLFNW
Trigger: CCAGTTGAAGAGACAATACAAGATCACTCTGCCCTT...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTAAGGGCAGAGTGATCTaGTATTGTCTCTTCAACTGG +
Preference number: 5 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLAKGRVI*YCLFNW
Trigger: CCAGTTGAAGAGACAATACAAGATCACTCTGCCCTT...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCATCAGAGTCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTCAAGACATACCTCAATaGCATCTTTCAATGAACCAG +
Preference number: 5 (lower is better)
Translates to: ASESNSTETLSADFKVLTQDIPQ*HLSMNQ
Trigger: CTGGTTCATTGAAAGATGCAATTGAGGTATGTCTTG...AGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGACTCTGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTGCTCGTCATCTTCCTTaGGTGTCTGTTCCAGTAAGG +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGARHLP*VSVPVR
Trigger: CCTTACTGGAACAGACACCAAAGGAAGATGACGAGC...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTCCTGCTCACTGGTTTaGATTCTGATGGCCCGTTCT +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGSCSLV*ILMARS
Trigger: AGAACGGGCCATCAGAATCAAAACCAGTGAGCAGGA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GCAACACTCAGAGTAAAACCCAGCTTGCATCAGAGTCAAATTCCACAGAGACTCATTCATTGGAAGAATTaGTGGCAAGAGCATGTATCA +
Preference number: 5 (lower is better)
Translates to: ATLRVKPSLHQSQIPQRLIHWKN*WQEHVS
Trigger: TGATACATGCTCTTGCCACAAATTCTTCCAATGAAT...GAGTCTCTGTGGAATTTGACTCTGATGCAAGCTGGGTTTTACTCTGAGTGTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAACCAGCATCCTCATGTaGAATCTCCTGCGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYITSILM*NLLRCL
Trigger: CAAGCACCGCAGGAGATTCAACATGAGGATGCTGGT...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTTCTTGCATTGCCAGCTaGACGGAAACAGACAAGTTG +
Preference number: 5 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTSCIAS*TETDKL
Trigger: CAACTTGTCTGTTTCCGTCAAGCTGGCAATGCAAGA...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGTGGTAAAGGCTGACTaGTCAGCAAACGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIVVKAD*SANVTA
Trigger: GGCAGTCACGTTTGCTGACAAGTCAGCCTTTACCAC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAATTCTCAGAGGCTGTTTaGATGAAGCTTTTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEFSEAV*MKLLCV
Trigger: AACACACAAAAGCTTCATCAAAACAGCCTCTGAGAA...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATACAACAAAGCAAGCACTaGCAGAATTGCAGTATGTGC +
Preference number: 5 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIQQSKH*QNCSMC
Trigger: GCACATACTGCAATTCTGCAAGTGCTTGCTTTGTTG...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTCTTCTGCTACGGAGTaGTGTTTGACCTGCTCCACA +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGSSATE*CLTCST
Trigger: TGTGGAGCAGGTCAAACACAACTCCGTAGCAGAAGA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS TCA 90 bp TCTCCTCCAATGATAGGTCTCACTCTCATCACTTGTATTGCCCAGTaGGTTAGTTTCCATACAACATTTCCAGAAGCGTACTTTATTGTC +
Preference number: 5 (lower is better)
Translates to: SPPMIGLTLITCIAQ*VSFHTTFPEAYFIV
Trigger: GACAATAAAGTACGCTTCTGGAAATGTTGTATGGAAACTAACTCACTGGGCAATACAAGTGATGAGAGTGAGACCTATCATTGGAGGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS TCA 90 bp GCCAATGTTCCGAAATATGGACTGCTTAGCATGCTCGCTCTTAAATaGATGAATCAGGCCATGGCCTGTCAATCTCCATACTTTTATATT +
Preference number: 5 (lower is better)
Translates to: ANVPKYGLLSMLALK*MNQAMACQSPYFYI
Trigger: AATATAAAAGTATGGAGATTGACAGGCCATGGCCTGATTCATTCATTTAAGAGCGAGCATGCTAAGCAGTCCATATTTCGGAACATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 90 bp ACTAAGTCTATAGATCTCAGAAGAACCCATCTTGACTTAACTCCTTaGTTGATACTACCACCTAGTGGTAAAGTGATGACAGCTACTCCA +
Preference number: 5 (lower is better)
Translates to: TKSIDLRRTHLDLTP*LILPPSGKVMTATP
Trigger: TGGAGTAGCTGTCATCACTTTACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTGAGATCTATAGACTTAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CCA 90 bp TCCATTGATATCATCAATATTAAATGCAGTGCCAACCAGGACATTTaGAATATCTGTAGTAGGATTGATGCTCGCCGCGATGTGAAAGTG +
Preference number: 5 (lower is better)
Translates to: SIDIINIKCSANQDI*NICSRIDARRDVKV
Trigger: CACTTTCACATCGCGGCGAGCATCAATCCTACTACAGATATTCCAAATGTCCTGGTTGGCACTGCATTTAATATTGATGATATCAATGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS-3UTR CAA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATAGCAGTAGCTGTGTATTaGATCCACATTGGTCAGTTA +
Preference number: 5 (lower is better)
Translates to: ENRKENVSQQCFLPPFGIAVAVY*IHIGQL
Trigger: TAACTGACCAATGTGGATCAAATACACAGCTACTGC...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTGGCACACTGGGTAAATaGAAGAGGAACTCAGATGAC +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGGTLGK*KRNSDD
Trigger: GTCATCTGAGTTCCTCTTCAATTTACCCAGTGTGCC...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCTCAACGTTTCCAAATTaGACAGAATGCTTCCATTGG +
Preference number: 5 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFSTFPN*TECFHW
Trigger: CCAATGGAAGCATTCTGTCAAATTTGGAAACGTTGA...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp AGCATGATTACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTCTAACAGCTGAGTaGGATGATACTGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SMITHCLQRKVLYTVMFTILTAE*DDTVAE
Trigger: CTCTGCCACAGTATCATCCAACTCAGCTGTTAGAAT...AGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTAATCATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp CTAACCTCAAGTGTTTCTGAATCAGGGTTGTTACATGGCGTAAAGGATAGCTTCATAACTGATTCATGGTaGCATATCTCATGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: LTSSVSESGLLHGVKDSFITDSW*HISCKA
Trigger: TGCCTTGCATGAGATATGCAACCATGAATCAGTTAT...GAAGCTATCCTTTACGCCATGTAACAACCCTGATTCAGAAACACTTGAGGTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTGGCTGGTCTTCATCTaGGGCAGAACTCAAGAGATT +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGWLVFI*GRTQEI
Trigger: AATCTCTTGAGTTCTGCCCAAGATGAAGACCAGCCA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCAAATTCCACAGAGACTCTCTCTGCTGATTTCAAGGTGTTGACTGTCGTGGAAATTCATTGGAAGAATTaGTGGCAAGAGCATGTATCA +
Preference number: 5 (lower is better)
Translates to: SNSTETLSADFKVLTVVEIHWKN*WQEHVS
Trigger: TGATACATGCTCTTGCCACAAATTCTTCCAATGAAT...TTCCACGACAGTCAACACCTTGAAATCAGCAGAGAGAGTCTCTGTGGAATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTCTTGCATTGCCAGCTaGACGGAAACAGACAAGTTG +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGSCIAS*TETDKL
Trigger: CAACTTGTCTGTTTCCGTCAAGCTGGCAATGCAAGA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTGCAGTTTGGTTAACTaGCCAGATACTCAGAAAACC +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERCSLVN*PDTQKT
Trigger: GGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCA...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGAGGCATACGTTTCTATaGTCATTGGAATGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERRHTFL*SLECPE
Trigger: CTCTGGACATTCCAATGACAATAGAAACGTATGCCT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GAGAACAGGAAGGAAAACGTGAGTCAGCAATGTTTTCTTCCTCCATTTGGTATATCTTGCTGGGATGGGTaGTATGAATCTTTTGTAGCA +
Preference number: 5 (lower is better)
Translates to: ENRKENVSQQCFLPPFGISCWDG*YESFVA
Trigger: TGCTACAAAAGATTCATACAACCCATCCCAGCAAGA...TATACCAAATGGAGGAAGAAAACATTGCTGACTCACGTTTTCCTTCCTGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCATGAAATGTACGGGTaGCTGCATTTCTCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGHEMYG*LHFSEA
Trigger: AGCCTCTGAGAAATGCAGCAACCCGTACATTTCATG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTTCCACACAACTGACTaGGATGTTCCCATGCTTAGC +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGFHTTD*DVPMLS
Trigger: GCTAAGCATGGGAACATCCAAGTCAGTTGTGTGGAA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS GCA 90 bp TCAACGTTTCCAAATTTGACAGAATGCTTCCATTGGGCATATACATaGATTTCACAATCCATTCCCACCACCAATATTCCATCTCTTACC +
Preference number: 5 (lower is better)
Translates to: STFPNLTECFHWAYT*ISQSIPTTNIPSLT
Trigger: GGTAAGAGATGGAATATTGGTGGTGGGAATGGATTGTGAAATGCATGTATATGCCCAATGGAAGCATTCTGTCAAATTTGGAAACGTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAGACCTGCTGAAGGCGTaGCTCTTATTACTTCAACAG +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIDLLKA*LLLLQQ
Trigger: CTGTTGAAGTAATAAGAGCAACGCCTTCAGCAGGTC...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTCAGAAGCGTACTTTATaGTCGGAGCAAGTTGTAACC +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGQKRTL*SEQVVT
Trigger: GGTTACAACTTGCTCCGACAATAAAGTACGCTTCTG...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TCTTCCTCCATTTGGTATAAAGGCCCTGCTCATTACTGTAACTTACTGTTAGCTACTCCATCCTTACTGTaGGTTTGGTCACTTACAATT +
Preference number: 5 (lower is better)
Translates to: SSSIWYKGPAHYCNLLLATPSLL*VWSLTI
Trigger: AATTGTAAGTGACCAAACCAACAGTAAGGATGGAGT...AGCTAACAGTAAGTTACAGTAATGAGCAGGGCCTTTATACCAAATGGAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGACTCCATCCTTACTGTaGGTTTGGTCACTTACAATT +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERTPSLL*VWSLTI
Trigger: AATTGTAAGTGACCAAACCAACAGTAAGGATGGAGT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGCAGAGTGATCTTGTATaGTCTCTTCAACTGGACTAT +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERQSDLV*SLQLDY
Trigger: ATAGTCCAGTTGAAGAGACAATACAAGATCACTCTG...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TGTCGTGGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGATTGCTGGAATCATATaGATCAGTTCTTCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: CRGKQNCLIPTLHLLTERIAGII*ISSSSA
Trigger: AGCTGAGGAAGAACTGATCAATATGATTCCAGCAAT...CCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCCACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCATACTCTCAGGAGATCTaGGTTTTTCTGCAACCACAG +
Preference number: 5 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPYSQEI*VFLQPQ
Trigger: CTGTGGTTGCAGAAAAACCAAGATCTCCTGAGAGTA...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATATGGCTGGTCTTCATCTaGGGCAGAACTCAAGAGATT +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIWLVFI*GRTQEI
Trigger: AATCTCTTGAGTTCTGCCCAAGATGAAGACCAGCCA...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGAGGATTCGATGCAGTTaGGTTAACTTGCCAGATACT +
Preference number: 5 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWRIRCS*VNLPDT
Trigger: AGTATCTGGCAAGTTAACCAAACTGCATCGAATCCT...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTTTTTACTAAGAGAGTaGGCGTCCCCAGAGGGAAAT +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGFLLRE*ASPEGN
Trigger: ATTTCCCTCTGGGGACGCCAACTCTCTTAGTAAAAA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 90 bp ATGGGGACTATCTACAGACATCATCTCTTGCTGGGATGGGTTGTATaGATCTTTTGTAGCATTCACACAAGCATACATCATGATGTTTTT +
Preference number: 5 (lower is better)
Translates to: MGTIYRHHLLLGWVV*IFCSIHTSIHHDVF
Trigger: AAAAACATCATGATGTATGCTTGTGTGAATGCTACAAAAGATTCATACAACCCATCCCAGCAAGAGATGATGTCTGTAGATAGTCCCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 90 bp ATAATTTTCTTGCATCGACCACAGCTTGATAGAGTCTTAGATTTTTaGCATCAGATGCAACAAAGCAAGCACTTGCAGAATTGCAGTATG +
Preference number: 5 (lower is better)
Translates to: IIFLHRPQLDRVLDF*HQMQQSKHLQNCSM
Trigger: CATACTGCAATTCTGCAAGTGCTTGCTTTGTTGCATCTGATGGCAAAAATCTAAGACTCTATCAAGCTGTGGTCGATGCAAGAAAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAATTCTAACAGCTGAGTaGGATGATACTGTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIILTAE*DDTVAE
Trigger: CTCTGCCACAGTATCATCCAACTCAGCTGTTAGAAT...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGCAAGACATACCTCAATaGCATCTTTCAATGAACCAG +
Preference number: 5 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWQDIPQ*HLSMNQ
Trigger: CTGGTTCATTGAAAGATGCAATTGAGGTATGTCTTG...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTACAGAACATTCAATTTaGGCTGGTCTTCATCTTGGG +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGTEHSI*AGLHLG
Trigger: CCCAAGATGAAGACCAGCCAAAATTGAATGTTCTGT...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTGCAGTTTGGTTAACTaGCCAGATACTCAGAAAACC +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGCSLVN*PDTQKT
Trigger: GGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAATTAGGAGTTGTTGCTaGGGGGCATATTGGAGTACT +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIIRSCC*GAYWST
Trigger: AGTACTCCAATATGCCCCCAAGCAACAACTCCTAAT...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTTCTTGCTGGGATGGGTaGTATGAATCTTTTGTAGCA +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGSCWDG*YESFVA
Trigger: TGCTACAAAAGATTCATACAACCCATCCCAGCAAGA...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS-3UTR CAA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGTTCTCAGAGGCTGTTTaGATGAAGCTTTTGTGTGTT +
Preference number: 5 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWFSEAV*MKLLCV
Trigger: AACACACAAAAGCTTCATCAAAACAGCCTCTGAGAA...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS TCA 90 bp TCCATATCTTCTTTGTGTGGCTTATATCCAATAATGAAGTCTTCTTaGAACACGTGCAGTAGCTGTGTATTTGATCCACATTGGTCAGTT +
Preference number: 5 (lower is better)
Translates to: SISSLCGLYPIMKSS*NTCSSCVFDPHWSV
Trigger: AACTGACCAATGTGGATCAAATACACAGCTACTGCACGTGTTTCAAGAAGACTTCATTATTGGATATAAGCCACACAAAGAAGATATGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS TCA 90 bp AGTCTCTACTGTAGAATGCGCTTTGCTCGAATATTCTTTAATAACTaGTTCATGGTTGCATATCTCATGCAAGGCAGCAATTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SLYCRMRFARIFFNN*FMVAYLMQGSNFLF
Trigger: GAAAAGGAAATTGCTGCCTTGCATGAGATATGCAACCATGAATCAGTTATTAAAGAATATTCGAGCAAAGCGCATTCTACAGTAGAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAAGCTCTGTGGCTTTTTaGTACTGTCCTCTGAAATTC +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYISSVAF*YCPLKF
Trigger: GAATTTCAGAGGACAGTACAAAAAAGCCACAGAGCT...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TATGTTTTAATACATCAGTATAATGACAGGAACATGCACTCTACCAACCTGGGTATAACTGATTCATGGTaGCATATCTCATGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: YVLIHQYNDRNMHSTNLGITDSW*HISCKA
Trigger: TGCCTTGCATGAGATATGCAACCATGAATCAGTTAT...ACCCAGGTTGGTAGAGTGCATGTTCCTGTCATTATACTGATGTATTAAAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGATTCATTGGAAGAATTaGTGGCAAGAGCATGTATCA +
Preference number: 5 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWIHWKN*WQEHVS
Trigger: TGATACATGCTCTTGCCACAAATTCTTCCAATGAAT...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATAAGGCATACGTTTCTATaGTCATTGGAATGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIRHTFL*SLECPE
Trigger: CTCTGGACATTCCAATGACAATAGAAACGTATGCCT...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp ATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCACATGGCATCTAATAATTTTCTaGCATCGACCACAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: IAFRERYSIPSCLLFSTWHLIIF*HRPQLD
Trigger: ATCAAGCTGTGGTCGATGCAAGAAAATTATTAGATG...CCATGTGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACCACTGACACTTGAGTaGACTGTTTCTCTTATGAGA +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIPLTLE*TVSLMR
Trigger: TCTCATAAGAGAAACAGTCAACTCAAGTGTCAGTGG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 90 bp TCCTGTGAGCGCTCCTCATCTTCTCTATCTGCATCATCACTTTCATaGTCTAATTGTTTTTCAGAAAGTTTTCGTAATTGGTGCATAAAT +
Preference number: 5 (lower is better)
Translates to: SCERSSSSLSASSLS*SNCFSESFRNWCIN
Trigger: ATTTATGCACCAATTACGAAAACTTTCTGAAAAACAATTAGATCATGAAAGTGATGATGCAGATAGAGAAGATGAGGAGCGCTCACAGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATATCAACGTTTCCAAATTaGACAGAATGCTTCCATTGG +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYISTFPN*TECFHW
Trigger: CCAATGGAAGCATTCTGTCAAATTTGGAAACGTTGA...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACAAGACATACCTCAATaGCATCTTTCAATGAACCAG +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIQDIPQ*HLSMNQ
Trigger: CTGGTTCATTGAAAGATGCAATTGAGGTATGTCTTG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS-3UTR CAA 90 bp TACACATTGCCTTCAGAGAAAGGTACTCTATACCGTCATGTTTACTATTTTCCAGCAACACCACACTTGTaGCCTTGTGAATTAAAATAT +
Preference number: 5 (lower is better)
Translates to: YTLPSEKGTLYRHVYYFPATPHL*PCELKY
Trigger: ATATTTTAATTCACAAGGCAACAAGTGTGGTGTTGC...TGGAAAATAGTAAACATGACGGTATAGAGTACCTTTCTCTGAAGGCAATGTGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS GCA 90 bp ACTTGTCTAAATATTCCAGGGTTATATTCATCCAAATACTTTACATaGCACACTAGAAAAGTTCCATCTACAGGGTGTATCGTGAATAAC +
Preference number: 5 (lower is better)
Translates to: TCLNIPGLYSSKYFT*HTRKVPSTGCIVNN
Trigger: GTTATTCACGATACACCCTGTAGATGGAACTTTTCTAGTGTGGCATGTAAAGTATTTGGATGAATATAACCCTGGAATATTTAGACAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS-3UTR CAA 90 bp GGAAAACAGAACTGCCTAATTCCTACATTACACCTTTTAACTGAGAGGTATATACATCTAATAATTTTCTaGCATCGACCACAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: GKQNCLIPTLHLLTERYIHLIIF*HRPQLD
Trigger: ATCAAGCTGTGGTCGATGCAAGAAAATTATTAGATG...TATATACCTCTCAGTTAAAAGGTGTAATGTAGGAATTAGGCAGTTCTGTTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS CCA 72 bp GGCAGAGATGGAGGTGGGTGTGGCTGGCTTGAGGAATaGGAGGCTGCACCAGGCTGGTACAGGGTTGTAGTG +
Preference number: 6 (lower is better)
Translates to: GRDGGGCGWLEE*EAAPGWYRVVV
Trigger: CACTACAACCCTGTACCAGCCTGGTGCAGCCTCCCATTCCTCAAGCCAGCCACACCCACCTCCATCTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 72 bp AGCACTGGGCAGAACCCTGGTTTTCAGCGTGCCGTCTaGGCCACAGGAGAAGAGCCGATTGTCCTGGCTGAT +
Preference number: 6 (lower is better)
Translates to: STGQNPGFQRAV*ATGEEPIVLAD
Trigger: ATCAGCCAGGACAATCGGCTCTTCTCCTGTGGCGCAGACGGCACGCTGAAAACCAGGGTTCTGCCCAGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp GGGACCAGCATCCTCATGTTGAATCTCCTGCGGTGCTaGTCCATGTCCTCAGAGGCCACAGGAGGTGCTGCG +
Preference number: 6 (lower is better)
Translates to: GTSILMLNLLRC*SMSSEATGGAA
Trigger: CGCAGCACCTCCTGTGGCCTCTGAGGACATGGACAAGCACCGCAGGAGATTCAACATGAGGATGCTGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 72 bp CCAGGGACCAGCATCCTCATGTTGAATCTCCTGCGGTaGTTGTCCATGTCCTCAGAGGCCACAGGAGGTGCT +
Preference number: 6 (lower is better)
Translates to: PGTSILMLNLLR*LSMSSEATGGA
Trigger: AGCACCTCCTGTGGCCTCTGAGGACATGGACAAGCACCGCAGGAGATTCAACATGAGGATGCTGGTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 72 bp GTGCCGTCTGCGCCACAGGAGAAGAGCCGATTGTCCTaGCTGATAGCAATCTGCATGACTCCAGCGCCAATG +
Preference number: 6 (lower is better)
Translates to: VPSAPQEKSRLS*LIAICMTPAPM
Trigger: CATTGGCGCTGGAGTCATGCAGATTGCTATCAGCCAGGACAATCGGCTCTTCTCCTGTGGCGCAGACGGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp TTCAGCGTGCCGTCTGCGCCACAGGAGAAGAGCCGATaGTCCTGGCTGATAGCAATCTGCATGACTCCAGCG +
Preference number: 6 (lower is better)
Translates to: FSVPSAPQEKSR*SWLIAICMTPA
Trigger: CGCTGGAGTCATGCAGATTGCTATCAGCCAGGACAATCGGCTCTTCTCCTGTGGCGCAGACGGCACGCTGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 90 bp ACCCTGGTTTTCAGCGTGCCGTCTGCGCCACAGGAGAAGAGCCGATaGTCCTGGCTGATAGCAATCTGCATGACTCCAGCGCCAATGTTC +
Preference number: 6 (lower is better)
Translates to: TLVFSVPSAPQEKSR*SWLIAICMTPAPMF
Trigger: GAACATTGGCGCTGGAGTCATGCAGATTGCTATCAGCCAGGACAATCGGCTCTTCTCCTGTGGCGCAGACGGCACGCTGAAAACCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 72 bp AAGCCACCGCCATCATCCTCTTCTAAGGCACCGTCATaGTCGTCACCCCAATCGAGCCTAAGAGGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: KPPPSSSSKAPS*SSPQSSLRGSS
Trigger: CGAGGAGCCTCTTAGGCTCGATTGGGGTGACGATCATGACGGTGCCTTAGAAGAGGATGATGGCGGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 72 bp GTTGCCACAGTATCCGCCAGTGCTACAAGGAACATCTaGTCCAAGCGGGTAAGGCCTGGCAGACTTGAGTGC +
Preference number: 6 (lower is better)
Translates to: VATVSASATRNI*SKRVRPGRLEC
Trigger: GCACTCAAGTCTGCCAGGCCTTACCCGCTTGGAGCAGATGTTCCTTGTAGCACTGGCGGATACTGTGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 72 bp AAGCTCCGTACTGGTGGTTGCCACAGTATCCGCCAGTaGTACAAGGAACATCTGCTCCAAGCGGGTAAGGCC +
Preference number: 6 (lower is better)
Translates to: KLRTGGCHSIRQ*YKEHLLQAGKA
Trigger: GGCCTTACCCGCTTGGAGCAGATGTTCCTTGTAGCACTGGCGGATACTGTGGCAACCACCAGTACGGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 72 bp GGGTTGCTTGTAAGCCACTGCAAGGCGGCCTGTGTATaGGCAGCTAACAGCAACAGGTCTTCCCACGATGCT +
Preference number: 6 (lower is better)
Translates to: GLLVSHCKAACV*AANSNRSSHDA
Trigger: AGCATCGTGGGAAGACCTGTTGCTGTTAGCTGCTCATACACAGGCCGCCTTGCAGTGGCTTACAAGCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS GCA 72 bp GCTGTACTGCCGCTCACACTAATGGTCCGAGAGAGATaGCGCTTAGTTCCTTCTCCAGCATCAGGATCCCGA +
Preference number: 6 (lower is better)
Translates to: AVLPLTLMVRER*RLVPSPASGSR
Trigger: TCGGGATCCTGATGCTGGAGAAGGAACTAAGCGGCATCTCTCTCGGACCATTAGTGTGAGCGGCAGTACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS GCA 72 bp ACCGCCTGGAGGAGCCCACAGCTGAATCGAATCCGTTaGTGTCAGCAATCTGTTATCTTGAGGGTCCCATGC +
Preference number: 6 (lower is better)
Translates to: TAWRSPQLNRIR*CQQSVILRVPC
Trigger: GCATGGGACCCTCAAGATAACAGATTGCTGACAGCAACGGATTCGATTCAGCTGTGGGCTCCTCCAGGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS CAA 72 bp CGAGGGTCTGAGGCACTCTGCTCCTGGCCAGCCTTCTaGGCATCTGTAGTTTTCATTACTAAGCCACCGCCA +
Preference number: 6 (lower is better)
Translates to: RGSEALCSWPAF*ASVVFITKPPP
Trigger: TGGCGGTGGCTTAGTAATGAAAACTACAGATGCCAAGAAGGCTGGCCAGGAGCAGAGTGCCTCAGACCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp CACCGCCTGGAGGAGCCCACAGCTGAATCGAATCCGTaGCTGTCAGCAATCTGTTATCTTGAGGGTCCCATG +
Preference number: 6 (lower is better)
Translates to: HRLEEPTAESNP*LSAICYLEGPM
Trigger: CATGGGACCCTCAAGATAACAGATTGCTGACAGCAACGGATTCGATTCAGCTGTGGGCTCCTCCAGGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 72 bp AGCCTAAGAGGCTCCTCGTCAACTGTAACCATTGGCTaGCTCCAGTCAAACTGGGAGGAAGTCACAGCCGAC +
Preference number: 6 (lower is better)
Translates to: SLRGSSSTVTIG*LQSNWEEVTAD
Trigger: GTCGGCTGTGACTTCCTCCCAGTTTGACTGGAGTCAGCCAATGGTTACAGTTGACGAGGAGCCTCTTAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 72 bp ACTCAAACATGCGGACACTGCCGTCCTGGGCACCTGTaGGATAGTACTGATGGACGGGGTGTGATGTCATTC +
Preference number: 6 (lower is better)
Translates to: TQTCGHCRPGHL*DSTDGRGVMSF
Trigger: GAATGACATCACACCCCGTCCATCAGTACTATCTCACAGGTGCCCAGGACGGCAGTGTCCGCATGTTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp ATGCTCCCTTTTAGCCTGCAGCCGTCGTCGTTCTATTaGGTGGCGCTCATAGGAACCGATATCCGGCTTGTC +
Preference number: 6 (lower is better)
Translates to: MLPFSLQPSSFY*VALIGTDIRLV
Trigger: GACAAGCCGGATATCGGTTCCTATGAGCGCCACCAAATAGAACGACGACGGCTGCAGGCTAAAAGGGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 90 bp CCGACCAGTCAGCCCCAGAACCACCATCACTCCTGCTCACTGGTTTaGATTCTGATGGCCCGTTCTCCATCCTTCCAGAAACAGAGTCAA +
Preference number: 6 (lower is better)
Translates to: PTSQPQNHHHSCSLV*ILMARSPSFQKQSQ
Trigger: TTGACTCTGTTTCTGGAAGGATGGAGAACGGGCCATCAGAATCAAAACCAGTGAGCAGGAGTGATGGTGGTTCTGGGGCTGACTGGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 90 bp AGAGCATGCTGGATCCTGTCTTTGTGTTTCCCAGCAGAAGAGAGGTaGCTGGCAACGCTGGAGGTAGTGGTCTCACAAATCTGCTCACCC +
Preference number: 6 (lower is better)
Translates to: RACWILSLCFPAEER*LATLEVVVSQICSP
Trigger: GGGTGAGCAGATTTGTGAGACCACTACCTCCAGCGTTGCCAGCAACCTCTCTTCTGCTGGGAAACACAAAGACAGGATCCAGCATGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS TCA 72 bp GTCCTCAGAGGCCACAGGAGGTGCTGCGATACTTTCTaGTTGCCTCCGAGGCTTCACAACAAGTTTTACACC +
Preference number: 6 (lower is better)
Translates to: VLRGHRRCCDTF*LPPRLHNKFYT
Trigger: GGTGTAAAACTTGTTGTGAAGCCTCGGAGGCAATCAGAAAGTATCGCAGCACCTCCTGTGGCCTCTGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 72 bp AATCTTCCGGTCCAGCAGTACTGTAGGCAGTGGCATTaGGATGCTAGGTCGTGGATGGGTTCTAGGACTTCC +
Preference number: 6 (lower is better)
Translates to: NLPVQQYCRQWH*DARSWMGSRTS
Trigger: GGAAGTCCTAGAACCCATCCACGACCTAGCATCTCAATGCCACTGCCTACAGTACTGCTGGACCGGAAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 72 bp TCAGAGGCCACAGGAGGTGCTGCGATACTTTCTGATTaGCTCCGAGGCTTCACAACAAGTTTTACACCCCCT +
Preference number: 6 (lower is better)
Translates to: SEATGGAAILSD*LRGFTTSFTPP
Trigger: AGGGGGTGTAAAACTTGTTGTGAAGCCTCGGAGGCAATCAGAAAGTATCGCAGCACCTCCTGTGGCCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 72 bp ATCGAGCCTAAGAGGCTCCTCGTCAACTGTAACCATTaGCTGACTCCAGTCAAACTGGGAGGAAGTCACAGC +
Preference number: 6 (lower is better)
Translates to: IEPKRLLVNCNH*LTPVKLGGSHS
Trigger: GCTGTGACTTCCTCCCAGTTTGACTGGAGTCAGCCAATGGTTACAGTTGACGAGGAGCCTCTTAGGCTCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 72 bp GTCAGCAAAGCACGAGGGTCTGAGGCACTCTGCTCCTaGCCAGCCTTCTTGGCATCTGTAGTTTTCATTACT +
Preference number: 6 (lower is better)
Translates to: VSKARGSEALCS*PAFLASVVFIT
Trigger: AGTAATGAAAACTACAGATGCCAAGAAGGCTGGCCAGGAGCAGAGTGCCTCAGACCCTCGTGCTTTGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 72 bp CTCCCATGCTGGTTGGAGCATTCCACACAACTGACTTaGATGTTCCCATGCTTAGCACCAGGGATGATCTGC +
Preference number: 6 (lower is better)
Translates to: LPCWLEHSTQLT*MFPCLAPGMIC
Trigger: GCAGATCATCCCTGGTGCTAAGCATGGGAACATCCAAGTCAGTTGTGTGGAATGCTCCAACCAGCATGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS CAA 90 bp TCTTTCTGCATGCTCCCTTTTAGCCTGCAGCCGTCGTCGTTCTATTaGGTGGCGCTCATAGGAACCGATATCCGGCTTGTCCACCATTTC +
Preference number: 6 (lower is better)
Translates to: SFCMLPFSLQPSSFY*VALIGTDIRLVHHF
Trigger: GAAATGGTGGACAAGCCGGATATCGGTTCCTATGAGCGCCACCAAATAGAACGACGACGGCTGCAGGCTAAAAGGGAGCATGCAGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 90 bp AGCTGCAACTCTCCCATGCTGGTTGGAGCATTCCACACAACTGACTaGGATGTTCCCATGCTTAGCACCAGGGATGATCTGCACACATTC +
Preference number: 6 (lower is better)
Translates to: SCNSPMLVGAFHTTD*DVPMLSTRDDLHTF
Trigger: GAATGTGTGCAGATCATCCCTGGTGCTAAGCATGGGAACATCCAAGTCAGTTGTGTGGAATGCTCCAACCAGCATGGGAGAGTTGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 72 bp GTGGAAGCCCGTCTCCTCTTCACTTCATGGGGATCTTaGGGTATGATTGAAGACTTCCAGCCAGTCATAGGG +
Preference number: 6 (lower is better)
Translates to: VEARLLFTSWGS*GMIEDFQPVIG
Trigger: CCCTATGACTGGCTGGAAGTCTTCAATCATACCTCAAGATCCCCATGAAGTGAAGAGGAGACGGGCTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS TCA 72 bp TTCAAAGTCACTCGCCAGAATAACAATATCACAGCCTaGTCCATATGCCGTGAAGGGGACGTCCCCGACGCT +
Preference number: 6 (lower is better)
Translates to: FKVTRQNNNITA*SICREGDVPDA
Trigger: AGCGTCGGGGACGTCCCCTTCACGGCATATGGATCAGGCTGTGATATTGTTATTCTGGCGAGTGACTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS GCA 72 bp CCGAGTACCATCCTTCCCAATGGTAACTGTATCCTTTaGTGTACTGCCGCTCACACTAATGGTCCGAGAGAG +
Preference number: 6 (lower is better)
Translates to: PSTILPNGNCIL*CTAAHTNGPRE
Trigger: CTCTCTCGGACCATTAGTGTGAGCGGCAGTACAGCAAAGGATACAGTTACCATTGGGAAGGATGGTACTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS GCA 72 bp GGCATGGTGAGAAATGTGTCTGTGAACCTCGTGGGTTaGAGTCTTGTCAGGCATCAGTTCAGCGTGAGTTAC +
Preference number: 6 (lower is better)
Translates to: GMVRNVSVNLVG*SLVRHQFSVSY
Trigger: GTAACTCACGCTGAACTGATGCCTGACAAGACTGCAACCCACGAGGTTCACAGACACATTTCTCACCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 72 bp GCCCAGATCAGCTTCGACCTTGATGTGGCAATCTTCTaGTACGGAGTTGTGTTTGACCTGCTCCACATGTTC +
Preference number: 6 (lower is better)
Translates to: AQISFDLDVAIF*YGVVFDLLHMF
Trigger: GAACATGTGGAGCAGGTCAAACACAACTCCGTAGCAGAAGATTGCCACATCAAGGTCGAAGCTGATCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS CCA 72 bp AGCCTTTCCTACCCCCAGAGATTAGGAGTTGTTGCTTaGGGGCATATTGGAGTACTGTGGCACCATGGTCAT +
Preference number: 6 (lower is better)
Translates to: SLSYPQRLGVVA*GHIGVLWHHGH
Trigger: ATGACCATGGTGCCACAGTACTCCAATATGCCCCCAAGCAACAACTCCTAATCTCTGGGGGTAGGAAAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 72 bp CTCGAGGGTGTGCCAAGTAAACAAAGGAGAACTGAGTaGAAGCCCGTCTCCTCTTCACTTCATGGGGATCTT +
Preference number: 6 (lower is better)
Translates to: LEGVPSKQRRTE*KPVSSSLHGDL
Trigger: AAGATCCCCATGAAGTGAAGAGGAGACGGGCTTCCACTCAGTTCTCCTTTGTTTACTTGGCACACCCTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CCA 72 bp ACTGTAGGCAGTGGCATTGAGATGCTAGGTCGTGGATaGGTTCTAGGACTTCCCTCTCGTTCTCCATCTTCA +
Preference number: 6 (lower is better)
Translates to: TVGSGIEMLGRG*VLGLPSRSPSS
Trigger: TGAAGATGGAGAACGAGAGGGAAGTCCTAGAACCCATCCACGACCTAGCATCTCAATGCCACTGCCTACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CAA 72 bp TGGATCCTGTCTTTGTGTTTCCCAGCAGAAGAGAGGTaGCTGGCAACGCTGGAGGTAGTGGTCTCACAAATC +
Preference number: 6 (lower is better)
Translates to: WILSLCFPAEER*LATLEVVVSQI
Trigger: GATTTGTGAGACCACTACCTCCAGCGTTGCCAGCAACCTCTCTTCTGCTGGGAAACACAAAGACAGGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CAA 72 bp TCTCCCATGCTGGTTGGAGCATTCCACACAACTGACTaGGATGTTCCCATGCTTAGCACCAGGGATGATCTG +
Preference number: 6 (lower is better)
Translates to: SPMLVGAFHTTD*DVPMLSTRDDL
Trigger: CAGATCATCCCTGGTGCTAAGCATGGGAACATCCAAGTCAGTTGTGTGGAATGCTCCAACCAGCATGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS CAA 90 bp CTGAGTAGTTCTTATCCCTGTTTTCATCAAGCTCCGTACTGGTGGTaGCCACAGTATCCGCCAGTGCTACAAGGAACATCTGCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: LSSSYPCFHQAPYWW*PQYPPVLQGTSAPS
Trigger: GCTTGGAGCAGATGTTCCTTGTAGCACTGGCGGATACTGTGGCAACCACCAGTACGGAGCTTGATGAAAACAGGGATAAGAACTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 90 bp CCCAGATCAGCTTCGACCTTGATGTGGCAATCTTCTGCTACGGAGTaGTGTTTGACCTGCTCCACATGTTCTTCTACAGACTCACTCTGC +
Preference number: 6 (lower is better)
Translates to: PRSASTLMWQSSATE*CLTCSTCSSTDSLC
Trigger: GCAGAGTGAGTCTGTAGAAGAACATGTGGAGCAGGTCAAACACAACTCCGTAGCAGAAGATTGCCACATCAAGGTCGAAGCTGATCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS TCA 72 bp TGCTTTATTTCGGAGAATAGCTGGCCCCGCTCCCACTaGGAGGTCAGTTGGGTATGTGTTGACATAGTTAGG +
Preference number: 6 (lower is better)
Translates to: CFISENSWPRSH*EVSWVCVDIVR
Trigger: CCTAACTATGTCAACACATACCCAACTGACCTCTCAGTGGGAGCGGGGCCAGCTATTCTCCGAAATAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 72 bp CTTATCCCTGTTTTCATCAAGCTCCGTACTGGTGGTTaGCACAGTATCCGCCAGTGCTACAAGGAACATCTG +
Preference number: 6 (lower is better)
Translates to: LIPVFIKLRTGG*HSIRQCYKEHL
Trigger: CAGATGTTCCTTGTAGCACTGGCGGATACTGTGGCAACCACCAGTACGGAGCTTGATGAAAACAGGGATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp AACTCTTGCATTGCCAGCTTGACGGAAACAGACAAGTaGCTGAGGTCGTGTCCACTCAAACATGCGGACACT +
Preference number: 6 (lower is better)
Translates to: NSCIASLTETDK*LRSCPLKHADT
Trigger: AGTGTCCGCATGTTTGAGTGGACACGACCTCAGCAACTTGTCTGTTTCCGTCAAGCTGGCAATGCAAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp TGGCATGGTGAGAAATGTGTCTGTGAACCTCGTGGGTaGCAGTCTTGTCAGGCATCAGTTCAGCGTGAGTTA +
Preference number: 6 (lower is better)
Translates to: WHGEKCVCEPRG*QSCQASVQREL
Trigger: TAACTCACGCTGAACTGATGCCTGACAAGACTGCAACCCACGAGGTTCACAGACACATTTCTCACCATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CAA 72 bp GCATTCCCATATGAAGCTGCAACTCTCCCATGCTGGTaGGAGCATTCCACACAACTGACTTGGATGTTCCCA +
Preference number: 6 (lower is better)
Translates to: AFPYEAATLPCW*EHSTQLTWMFP
Trigger: TGGGAACATCCAAGTCAGTTGTGTGGAATGCTCCAACCAGCATGGGAGAGTTGCAGCTTCATATGGGAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 72 bp AGTTTGGTGTTGCATGCTCTTCGATGCTTTCTGTCCTaGGGCGTCGTCGATCACTTAGAAGAAGCCCTTGAT +
Preference number: 6 (lower is better)
Translates to: SLVLHALRCFLS*GVVDHLEEALD
Trigger: ATCAAGGGCTTCTTCTAAGTGATCGACGACGCCTCAGGACAGAAAGCATCGAAGAGCATGCAACACCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 72 bp TCGTGGGTTGCAGTCTTGTCAGGCATCAGTTCAGCGTaGGTTACAAGAACAGAAGACCTCCTTTGTCCTTTC +
Preference number: 6 (lower is better)
Translates to: SWVAVLSGISSA*VTRTEDLLCPF
Trigger: GAAAGGACAAAGGAGGTCTTCTGTTCTTGTAACTCACGCTGAACTGATGCCTGACAAGACTGCAACCCACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS TCA 72 bp ACAGAATGGCATGCCAGGTCATTGAGGTGGAATCGGTaGCCACAGTATCTGAATTTGTGGGACACAGTCAGA +
Preference number: 6 (lower is better)
Translates to: TEWHARSLRWNR*PQYLNLWDTVR
Trigger: TCTGACTGTGTCCCACAAATTCAGATACTGTGGTCACCGATTCCACCTCAATGACCTGGCATGCCATTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS TCA 72 bp ACCCAGGGGTTCAAAAATACACACAGCATTCCCATATaGAGCTGCAACTCTCCCATGCTGGTTGGAGCATTC +
Preference number: 6 (lower is better)
Translates to: TQGFKNTHSIPI*SCNSPMLVGAF
Trigger: GAATGCTCCAACCAGCATGGGAGAGTTGCAGCTTCATATGGGAATGCTGTGTGTATTTTTGAACCCCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS TCA 72 bp TCTTCTAGAATATCACCGCCTGGAGGAGCCCACAGCTaGATCGAATCCGTTGCTGTCAGCAATCTGTTATCT +
Preference number: 6 (lower is better)
Translates to: SSRISPPGGAHS*IESVAVSNLLS
Trigger: AGATAACAGATTGCTGACAGCAACGGATTCGATTCAGCTGTGGGCTCCTCCAGGCGGTGATATTCTAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS GCA 72 bp TGGTTTTTCTGCAACCACAGCTTTCGTCTTTCTGCATaGTCCCTTTTAGCCTGCAGCCGTCGTCGTTCTATT +
Preference number: 6 (lower is better)
Translates to: WFFCNHSFRLSA*SLLACSRRRSI
Trigger: AATAGAACGACGACGGCTGCAGGCTAAAAGGGAGCATGCAGAAAGACGAAAGCTGTGGTTGCAGAAAAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 72 bp ATTCTCTATCCAGAGATAATTCATGGTCCAGTTTCATaGGTAAGCCCCTCTCTCTCTCGTCCTGTGAGCGCT +
Preference number: 6 (lower is better)
Translates to: ILYPEIIHGPVS*VSPSLSRPVSA
Trigger: AGCGCTCACAGGACGAGAGAGAGAGGGGCTTACGCATGAAACTGGACCATGAATTATCTCTGGATAGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CCA 72 bp AGTAGTTCTTATCCCTGTTTTCATCAAGCTCCGTACTaGTGGTTGCCACAGTATCCGCCAGTGCTACAAGGA +
Preference number: 6 (lower is better)
Translates to: SSSYPCFHQAPY*WLPQYPPVLQG
Trigger: TCCTTGTAGCACTGGCGGATACTGTGGCAACCACCAGTACGGAGCTTGATGAAAACAGGGATAAGAACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 72 bp GTACCTGCCTCAGATTCTCTATCCAGAGATAATTCATaGTCCAGTTTCATGCGTAAGCCCCTCTCTCTCTCG +
Preference number: 6 (lower is better)
Translates to: VPASDSLSRDNS*SSFMRKPLSLS
Trigger: CGAGAGAGAGAGGGGCTTACGCATGAAACTGGACCATGAATTATCTCTGGATAGAGAATCTGAGGCAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CCA 72 bp ACAGCATTCCCATATGAAGCTGCAACTCTCCCATGCTaGTTGGAGCATTCCACACAACTGACTTGGATGTTC +
Preference number: 6 (lower is better)
Translates to: TAFPYEAATLPC*LEHSTQLTWMF
Trigger: GAACATCCAAGTCAGTTGTGTGGAATGCTCCAACCAGCATGGGAGAGTTGCAGCTTCATATGGGAATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS CAA 72 bp TCTTATCCCTGTTTTCATCAAGCTCCGTACTGGTGGTaGCCACAGTATCCGCCAGTGCTACAAGGAACATCT +
Preference number: 6 (lower is better)
Translates to: SYPCFHQAPYWW*PQYPPVLQGTS
Trigger: AGATGTTCCTTGTAGCACTGGCGGATACTGTGGCAACCACCAGTACGGAGCTTGATGAAAACAGGGATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp AGTAAGACATTACAGACAGAGCCCCTGGGCATATACTaGCTAGTTTTCCGCCATGAGAAACCTGTCACGGCT +
Preference number: 6 (lower is better)
Translates to: SKTLQTEPLGIY*LVFRHEKPVTA
Trigger: AGCCGTGACAGGTTTCTCATGGCGGAAAACTAGCAAGTATATGCCCAGGGGCTCTGTCTGTAATGTCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CAA 72 bp GCTTCGACCTTGATGTGGCAATCTTCTGCTACGGAGTaGTGTTTGACCTGCTCCACATGTTCTTCTACAGAC +
Preference number: 6 (lower is better)
Translates to: ASTLMWQSSATE*CLTCSTCSSTD
Trigger: GTCTGTAGAAGAACATGTGGAGCAGGTCAAACACAACTCCGTAGCAGAAGATTGCCACATCAAGGTCGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS CAA 90 bp ACTGTGGCACTGCCAACTCATGTACGGTTTAGGATTCGATGCAGTTaGGTTAACTTGCCAGATACTCAGAAAACCCTCTCCGTCTGCAAC +
Preference number: 6 (lower is better)
Translates to: TVALPTHVRFRIRCS*VNLPDTQKTLSVCN
Trigger: GTTGCAGACGGAGAGGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCATCGAATCCTAAACCGTACATGAGTTGGCAGTGCCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 90 bp CTGCCAACTCATGTACGGTTTAGGATTCGATGCAGTTTGGTTAACTaGCCAGATACTCAGAAAACCCTCTCCGTCTGCAACACCACACTT +
Preference number: 6 (lower is better)
Translates to: LPTHVRFRIRCSLVN*PDTQKTLSVCNTTL
Trigger: AAGTGTGGTGTTGCAGACGGAGAGGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCATCGAATCCTAAACCGTACATGAGTTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 90 bp AAAGTTCCATCTACAGGGTGTATCGTGAATAACATGTCAGGGTTCTaGTTCCACTCTGTCAGCAGCGTTTCAATCTTCCGGTCCAGCAGT +
Preference number: 6 (lower is better)
Translates to: KVPSTGCIVNNMSGF*FHSVSSVSIFRSSS
Trigger: ACTGCTGGACCGGAAGATTGAAACGCTGCTGACAGAGTGGAACAAGAACCCTGACATGTTATTCACGATACACCCTGTAGATGGAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CAA 90 bp TCAGCTTCGACCTTGATGTGGCAATCTTCTGCTACGGAGTTGTGTTaGACCTGCTCCACATGTTCTTCTACAGACTCACTCTGCTTTCTT +
Preference number: 6 (lower is better)
Translates to: SASTLMWQSSATELC*TCSTCSSTDSLCFL
Trigger: AAGAAAGCAGAGTGAGTCTGTAGAAGAACATGTGGAGCAGGTCAAACACAACTCCGTAGCAGAAGATTGCCACATCAAGGTCGAAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS TCA 72 bp GCCTGTCAATCTCCATACTTTTATATTGCCCTCTGCTaGGCCTGTAGTGAAGTACTCCTCACACGAATCCAG +
Preference number: 6 (lower is better)
Translates to: ACQSPYFYIALC*ACSEVLLTRIQ
Trigger: CTGGATTCGTGTGAGGAGTACTTCACTACAGGCTCAGCAGAGGGCAATATAAAAGTATGGAGATTGACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 72 bp AACAATGTTTCTGCCCAGAGCCGACACACACCATCATaGCATGAAGTCAGTAAGACATTACAGACAGAGCCC +
Preference number: 6 (lower is better)
Translates to: NNVSAQSRHTPS*HEVSKTLQTEP
Trigger: GGGCTCTGTCTGTAATGTCTTACTGACTTCATGTCATGATGGTGTGTGTCGGCTCTGGGCAGAAACATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 72 bp CTTAGTTCCTTCTCCAGCATCAGGATCCCGAACTATTaGAACTTCACCTGCGATGCACTTTACCAAATGGGA +
Preference number: 6 (lower is better)
Translates to: LSSFSSIRIPNY*NFTCDALYQMG
Trigger: TCCCATTTGGTAAAGTGCATCGCAGGTGAAGTTGCAATAGTTCGGGATCCTGATGCTGGAGAAGGAACTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS GCA 72 bp TTTGACAAGGAAATGCCAGAGTCGCTTGACAGGAAGTaGAGACGAATCCCGGGATTTGAATGGAGTGTTTTC +
Preference number: 6 (lower is better)
Translates to: FDKEMPESLDRK*RRIPGFEWSVF
Trigger: GAAAACACTCCATTCAAATCCCGGGATTCGTCTGCACTTCCTGTCAAGCGACTCTGGCATTTCCTTGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 72 bp TTGGAGCATTCCACACAACTGACTTGGATGTTCCCATaGTTAGCACCAGGGATGATCTGCACACATTCAAAG +
Preference number: 6 (lower is better)
Translates to: LEHSTQLTWMFP*LAPGMICTHSK
Trigger: CTTTGAATGTGTGCAGATCATCCCTGGTGCTAAGCATGGGAACATCCAAGTCAGTTGTGTGGAATGCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
CDS CAA 72 bp AGTCATAAGGATCTTCAAGCAAGCTCGGAACTTGAGTaGTTCAGCAATCACATCGACCTCAGTATCGCCGTC +
Preference number: 6 (lower is better)
Translates to: SHKDLQASSELE*FSNHIDLSIAV
Trigger: GACGGCGATACTGAGGTCGATGTGATTGCTGAACAACTCAAGTTCCGAGCTTGCTTGAAGATCCTTATGACT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp AGTCGCTTGACAGGAAGTGCAGACGAATCCCGGGATTaGAATGGAGTGTTTTCCGGCTCTAACATTGCTTTA +
Preference number: 6 (lower is better)
Translates to: SRLTGSADESRD*NGVFSGSNIAL
Trigger: TAAAGCAATGTTAGAGCCGGAAAACACTCCATTCAAATCCCGGGATTCGTCTGCACTTCCTGTCAAGCGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp TCTACAGGGTGTATCGTGAATAACATGTCAGGGTTCTaGTTCCACTCTGTCAGCAGCGTTTCAATCTTCCGG +
Preference number: 6 (lower is better)
Translates to: STGCIVNNMSGF*FHSVSSVSIFR
Trigger: CCGGAAGATTGAAACGCTGCTGACAGAGTGGAACAAGAACCCTGACATGTTATTCACGATACACCCTGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS TCA 72 bp ACAAGTCTGGAGCTCAGAATAAGCTTACTAGCAGTTTaGAGATTGGCAATTGACGAGGAATGTGGCACGGAG +
Preference number: 6 (lower is better)
Translates to: TSLELRISLLAV*RLAIDEECGTE
Trigger: CTCCGTGCCACATTCCTCGTCAATTGCCAATCTTCAAACTGCTAGTAAGCTTATTCTGAGCTCCAGACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS TCA 72 bp GATCACTTAGAAGAAGCCCTTGATAGGCCATTCCTGTaGACTGATTTCCTTCCGACTGACTGCTGTAGCTAT +
Preference number: 6 (lower is better)
Translates to: DHLEEALDRPFL*TDFLPTDCCSY
Trigger: ATAGCTACAGCAGTCAGTCGGAAGGAAATCAGTTCACAGGAATGGCCTATCAAGGGCTTCTTCTAAGTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118163.8
ENSMUST00000123709.8
CDS TCA 72 bp CCGAAATATGGACTGCTTAGCATGCTCGCTCTTAAATaGATGAATCAGGCCATGGCCTGTCAATCTCCATAC +
Preference number: 6 (lower is better)
Translates to: PKYGLLSMLALK*MNQAMACQSPY
Trigger: GTATGGAGATTGACAGGCCATGGCCTGATTCATTCATTTAAGAGCGAGCATGCTAAGCAGTCCATATTTCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 72 bp GTAAAGGCTGACTTGTCAGCAAACGTGACTGCCCACTaGTTCAAAGACCCATCTATGTGTTTAGAGACCATC +
Preference number: 6 (lower is better)
Translates to: VKADLSANVTAH*FKDPSMCLETI
Trigger: GATGGTCTCTAAACACATAGATGGGTCTTTGAATCAGTGGGCAGTCACGTTTGCTGACAAGTCAGCCTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 72 bp GTGGCACTGCCAACTCATGTACGGTTTAGGATTCGATaGAGTTTGGTTAACTTGCCAGATACTCAGAAAACC +
Preference number: 6 (lower is better)
Translates to: VALPTHVRFRIR*SLVNLPDTQKT
Trigger: GGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCATCGAATCCTAAACCGTACATGAGTTGGCAGTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS GCA 72 bp ATGTGGCAATCTTCTGCTACGGAGTTGTGTTTGACCTaGTCCACATGTTCTTCTACAGACTCACTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: MWQSSATELCLT*STCSSTDSLCF
Trigger: AAAGCAGAGTGAGTCTGTAGAAGAACATGTGGAGCAGGTCAAACACAACTCCGTAGCAGAAGATTGCCACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118163.8
CDS CCA 72 bp AGCTCAATAATGCAGCCTGGACGAGCAGTGGACTGTTaGCTCACAATGTTAAACACTTCTCCGATCAGTTTT +
Preference number: 6 (lower is better)
Translates to: SSIMQPGRAVDC*LTMLNTSPISF
Trigger: AAAACTGATCGGAGAAGTGTTTAACATTGTGAGCCAACAGTCCACTGCTCGTCCAGGCTGCATTATTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CCA 72 bp TTGGTCAGTTATGGCATCAAGCTCAATAATGCAGCCTaGACGAGCAGTGGACTGTTGGCTCACAATGTTAAA +
Preference number: 6 (lower is better)
Translates to: LVSYGIKLNNAA*TSSGLLAHNVK
Trigger: TTTAACATTGTGAGCCAACAGTCCACTGCTCGTCCAGGCTGCATTATTGAGCTTGATGCCATAACTGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CCA 72 bp CTTATTACTTCAACAGCTTCCGGCAGATCCAGGGGCTaGCTATATACAAGTCTGGAGCTCAGAATAAGCTTA +
Preference number: 6 (lower is better)
Translates to: LITSTASGRSRG*LYTSLELRISL
Trigger: TAAGCTTATTCTGAGCTCCAGACTTGTATATAGCCAGCCCCTGGATCTGCCGGAAGCTGTTGAAGTAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CCA 72 bp TGCCAACTCATGTACGGTTTAGGATTCGATGCAGTTTaGTTAACTTGCCAGATACTCAGAAAACCCTCTCCG +
Preference number: 6 (lower is better)
Translates to: CQLMYGLGFDAV*LTCQILRKPSP
Trigger: CGGAGAGGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCATCGAATCCTAAACCGTACATGAGTTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp AAGCTCAATAATGCAGCCTGGACGAGCAGTGGACTGTaGGCTCACAATGTTAAACACTTCTCCGATCAGTTT +
Preference number: 6 (lower is better)
Translates to: KLNNAAWTSSGL*AHNVKHFSDQF
Trigger: AAACTGATCGGAGAAGTGTTTAACATTGTGAGCCAACAGTCCACTGCTCGTCCAGGCTGCATTATTGAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CAA 72 bp AAATTGAAGAGGAACTCAGATGACCTGCTGAAGGCGTaGCTCTTATTACTTCAACAGCTTCCGGCAGATCCA +
Preference number: 6 (lower is better)
Translates to: KLKRNSDDLLKA*LLLLQQLPADP
Trigger: TGGATCTGCCGGAAGCTGTTGAAGTAATAAGAGCAACGCCTTCAGCAGGTCATCTGAGTTCCTCTTCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CAA 72 bp CATGTACGGTTTAGGATTCGATGCAGTTTGGTTAACTaGCCAGATACTCAGAAAACCCTCTCCGTCTGCAAC +
Preference number: 6 (lower is better)
Translates to: HVRFRIRCSLVN*PDTQKTLSVCN
Trigger: GTTGCAGACGGAGAGGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCATCGAATCCTAAACCGTACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp CTGCCAACTCATGTACGGTTTAGGATTCGATGCAGTTaGGTTAACTTGCCAGATACTCAGAAAACCCTCTCC +
Preference number: 6 (lower is better)
Translates to: LPTHVRFRIRCS*VNLPDTQKTLS
Trigger: GGAGAGGGTTTTCTGAGTATCTGGCAAGTTAACCAAACTGCATCGAATCCTAAACCGTACATGAGTTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 90 bp AAAGTTCTTAACTCAGTCATAAGGATCTTCAAGCAAGCTCGGAACTaGAGTTGTTCAGCAATCACATCGACCTCAGTATCGCCGTCAGCA +
Preference number: 6 (lower is better)
Translates to: KVLNSVIRIFKQARN*SCSAITSTSVSPSA
Trigger: TGCTGACGGCGATACTGAGGTCGATGTGATTGCTGAACAACTCAAGTTCCGAGCTTGCTTGAAGATCCTTATGACTGAGTTAAGAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 72 bp CAGAATAAGCTTACTAGCAGTTTGAAGATTGGCAATTaGCGAGGAATGTGGCACGGAGCTCATACTAGAGGA +
Preference number: 6 (lower is better)
Translates to: QNKLTSSLKIGN*RGMWHGAHTRG
Trigger: TCCTCTAGTATGAGCTCCGTGCCACATTCCTCGTCAATTGCCAATCTTCAAACTGCTAGTAAGCTTATTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS TCA 72 bp GCCACACTAGAAAAGTTCCATCTACAGGGTGTATCGTaGATAACATGTCAGGGTTCTTGTTCCACTCTGTCA +
Preference number: 6 (lower is better)
Translates to: ATLEKFHLQGVS*ITCQGSCSTLS
Trigger: TGACAGAGTGGAACAAGAACCCTGACATGTTATTCACGATACACCCTGTAGATGGAACTTTTCTAGTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CCA 72 bp CCGAAAACAGCAGCCCACATTCGATTATTTAACGGGTaGGCTGCAAGCCGAAACAATTCATTGGAAGAATTT +
Preference number: 6 (lower is better)
Translates to: PKTAAHIRLFNG*AASRNNSLEEF
Trigger: AAATTCTTCCAATGAATTGTTTCGGCTTGCAGCCCACCCGTTAAATAATCGAATGTGGGCTGCTGTTTTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp AACTCAGTCATAAGGATCTTCAAGCAAGCTCGGAACTaGAGTTGTTCAGCAATCACATCGACCTCAGTATCG +
Preference number: 6 (lower is better)
Translates to: NSVIRIFKQARN*SCSAITSTSVS
Trigger: CGATACTGAGGTCGATGTGATTGCTGAACAACTCAAGTTCCGAGCTTGCTTGAAGATCCTTATGACTGAGTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp GGTGATATCAATGTGTCCCAGAGGCATACGTTTCTATaGTCATTGGAATGTCCAGAGGTTGCAACTAGGCTT +
Preference number: 6 (lower is better)
Translates to: GDINVSQRHTFL*SLECPEVATRL
Trigger: AAGCCTAGTTGCAACCTCTGGACATTCCAATGACAATAGAAACGTATGCCTCTGGGACACATTGATATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 72 bp CTTTTTCTTGCCAGCATAGAGGATTTAAGGGCAGAGTaGTCTTGTATTGTCTCTTCAACTGGACTATCAGCG +
Preference number: 6 (lower is better)
Translates to: LFLASIEDLRAE*SCIVSSTGLSA
Trigger: CGCTGATAGTCCAGTTGAAGAGACAATACAAGATCACTCTGCCCTTAAATCCTCTATGCTGGCAAGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS TCA 72 bp TCTATTTACTTTACTGTCGGAGTCCCACTGACAGTCTaGTTCAGGAGTCAACAGAGCATTATGATGGGAAGA +
Preference number: 6 (lower is better)
Translates to: SIYFTVGVPLTV*FRSQQSIMMGR
Trigger: TCTTCCCATCATAATGCTCTGTTGACTCCTGAATCAGACTGTCAGTGGGACTCCGACAGTAAAGTAAATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 72 bp TGTGATCCATGGGGACTATCTACAGACATCATCTCTTaGTGGGATGGGTTGTATGAATCTTTTGTAGCATTC +
Preference number: 6 (lower is better)
Translates to: CDPWGLSTDIIS*WDGLYESFVAF
Trigger: GAATGCTACAAAAGATTCATACAACCCATCCCAGCAAGAGATGATGTCTGTAGATAGTCCCCATGGATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CCA 72 bp ACTATTGCAACTTCACCTGCGATGCACTTTACCAAATaGGAAAGAATGGCCTTAGCTCTTCTAACTTTCCCT +
Preference number: 6 (lower is better)
Translates to: TIATSPAMHFTK*ERMALALLTFP
Trigger: AGGGAAAGTTAGAAGAGCTAAGGCCATTCTTTCCCATTTGGTAAAGTGCATCGCAGGTGAAGTTGCAATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CAA 72 bp GATCTCAGAAGAACCCATCTTGACTTAACTCCTTGCTaGATACTACCACCTAGTGGTAAAGTGATGACAGCT +
Preference number: 6 (lower is better)
Translates to: DLRRTHLDLTPC*ILPPSGKVMTA
Trigger: AGCTGTCATCACTTTACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTGAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CAA 90 bp AAGTCTATAGATCTCAGAAGAACCCATCTTGACTTAACTCCTTGCTaGATACTACCACCTAGTGGTAAAGTGATGACAGCTACTCCATCC +
Preference number: 6 (lower is better)
Translates to: KSIDLRRTHLDLTPC*ILPPSGKVMTATPS
Trigger: GGATGGAGTAGCTGTCATCACTTTACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTGAGATCTATAGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CAA 90 bp GATCCATGGGGACTATCTACAGACATCATCTCTTGCTGGGATGGGTaGTATGAATCTTTTGTAGCATTCACACAAGCATACATCATGATG +
Preference number: 6 (lower is better)
Translates to: DPWGLSTDIISCWDG*YESFVAFTQAYIMM
Trigger: CATCATGATGTATGCTTGTGTGAATGCTACAAAAGATTCATACAACCCATCCCAGCAAGAGATGATGTCTGTAGATAGTCCCCATGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS TCA 72 bp CATCATCACTGTGTACACTTTCATCAGAATCATATATaGCACCACTATCAGACAAAGGGAGGAACGGCTTTG +
Preference number: 6 (lower is better)
Translates to: HHHCVHFHQNHI*HHYQTKGGTAL
Trigger: CAAAGCCGTTCCTCCCTTTGTCTGATAGTGGTGTCATATATGATTCTGATGAAAGTGTACACAGTGATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 72 bp CACAACAGAACATTCAATTTTGGCTGGTCTTCATCTTaGGCAGAACTCAAGAGATTAATGAGTGAGCTCACA +
Preference number: 6 (lower is better)
Translates to: HNRTFNFGWSSS*AELKRLMSELT
Trigger: TGTGAGCTCACTCATTAATCTCTTGAGTTCTGCCCAAGATGAAGACCAGCCAAAATTGAATGTTCTGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 72 bp AGCAACAACAGCTTCACACAACAGAACATTCAATTTTaGCTGGTCTTCATCTTGGGCAGAACTCAAGAGATT +
Preference number: 6 (lower is better)
Translates to: SNNSFTQQNIQF*LVFILGRTQEI
Trigger: AATCTCTTGAGTTCTGCCCAAGATGAAGACCAGCCAAAATTGAATGTTCTGTTGTGTGAAGCTGTTGTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CCA 72 bp ATCATCAATATTAAATGCAGTGCCAACCAGGACATTTaGAATATCTGTAGTAGGATTGATGCTCGCCGCGAT +
Preference number: 6 (lower is better)
Translates to: IINIKCSANQDI*NICSRIDARRD
Trigger: ATCGCGGCGAGCATCAATCCTACTACAGATATTCCAAATGTCCTGGTTGGCACTGCATTTAATATTGATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CAA 72 bp GGACTATCTACAGACATCATCTCTTGCTGGGATGGGTaGTATGAATCTTTTGTAGCATTCACACAAGCATAC +
Preference number: 6 (lower is better)
Translates to: GLSTDIISCWDG*YESFVAFTQAY
Trigger: GTATGCTTGTGTGAATGCTACAAAAGATTCATACAACCCATCCCAGCAAGAGATGATGTCTGTAGATAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS TCA 72 bp GCAGCTTTGGCTAAGCACGCTTGTACAGACTTAAGATaGAGGTGCCACATATGGAGAATAGAGTTATTATTT +
Preference number: 6 (lower is better)
Translates to: AALAKHACTDLR*RCHIWRIELLF
Trigger: AAATAATAACTCTATTCTCCATATGTGGCACCTTCATCTTAAGTCTGTACAAGCGTGCTTAGCCAAAGCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS GCA 72 bp ATAGATCTCAGAAGAACCCATCTTGACTTAACTCCTTaGTTGATACTACCACCTAGTGGTAAAGTGATGACA +
Preference number: 6 (lower is better)
Translates to: IDLRRTHLDLTP*LILPPSGKVMT
Trigger: TGTCATCACTTTACCACTAGGTGGTAGTATCAAGCAAGGAGTTAAGTCAAGATGGGTTCTTCTGAGATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CCA 72 bp ATGTGTTCGAAGGTAGTTGTAAAAACTGAACACCACTaGGTTACAAGATTTGATGATGACTTGTTGCTCGTC +
Preference number: 6 (lower is better)
Translates to: MCSKVVVKTEHH*VTRFDDDLLLV
Trigger: GACGAGCAACAAGTCATCATCAAATCTTGTAACCCAGTGGTGTTCAGTTTTTACAACTACCTTCGAACACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 72 bp TCTTCAACTGGACTATCAGCGTCAACGTTTCCAAATTaGACAGAATGCTTCCATTGGGCATATACATGCATT +
Preference number: 6 (lower is better)
Translates to: SSTGLSASTFPN*TECFHWAYTCI
Trigger: AATGCATGTATATGCCCAATGGAAGCATTCTGTCAAATTTGGAAACGTTGACGCTGATAGTCCAGTTGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
ENSMUST00000127880.8
CDS CAA 72 bp AGGCTTCTGGGTCTGACAGTTCATCTAATAATTTTCTaGCATCGACCACAGCTTGATAGAGTCTTAGATTTT +
Preference number: 6 (lower is better)
Translates to: RLLGLTVHLIIF*HRPQLDRVLDF
Trigger: AAAATCTAAGACTCTATCAAGCTGTGGTCGATGCAAGAAAATTATTAGATGAACTGTCAGACCCAGAAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS CAA 90 bp GTAGAATGCGCTTTGCTCGAATATTCTTTAATAACTGATTCATGGTaGCATATCTCATGCAAGGCAGCAATTTCCTTTTCAAGCCAGTTA +
Preference number: 6 (lower is better)
Translates to: VECALLEYSLITDSW*HISCKAAISFSSQL
Trigger: TAACTGGCTTGAAAAGGAAATTGCTGCCTTGCATGAGATATGCAACCATGAATCAGTTATTAAAGAATATTCGAGCAAAGCGCATTCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS CAA 90 bp ATGTACGGGTTGCTGCATTTCTCAGAGGCTGTTTTGATGAAGCTTTaGTGTGTTTTACAGGATCTATTAATCTATTTACTTTACTGTCGG +
Preference number: 6 (lower is better)
Translates to: MYGLLHFSEAVLMKL*CVLQDLLIYLLYCR
Trigger: CCGACAGTAAAGTAAATAGATTAATAGATCCTGTAAAACACACAAAAGCTTCATCAAAACAGCCTCTGAGAAATGCAGCAACCCGTACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS TCA 72 bp TGTAGAATGCGCTTTGCTCGAATATTCTTTAATAACTaGTTCATGGTTGCATATCTCATGCAAGGCAGCAAT +
Preference number: 6 (lower is better)
Translates to: CRMRFARIFFNN*FMVAYLMQGSN
Trigger: ATTGCTGCCTTGCATGAGATATGCAACCATGAATCAGTTATTAAAGAATATTCGAGCAAAGCGCATTCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000123709.8
CDS TCA 72 bp CGCTCCTCATCTTCTCTATCTGCATCATCACTTTCATaGTCTAATTGTTTTTCAGAAAGTTTTCGTAATTGG +
Preference number: 6 (lower is better)
Translates to: RSSSSLSASSLS*SNCFSESFRNW
Trigger: CCAATTACGAAAACTTTCTGAAAAACAATTAGATCATGAAAGTGATGATGCAGATAGAGAAGATGAGGAGCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8
CDS GCA 72 bp AATATTCCAGGGTTATATTCATCCAAATACTTTACATaGCACACTAGAAAAGTTCCATCTACAGGGTGTATC +
Preference number: 6 (lower is better)
Translates to: NIPGLYSSKYFT*HTRKVPSTGCI
Trigger: GATACACCCTGTAGATGGAACTTTTCTAGTGTGGCATGTAAAGTATTTGGATGAATATAACCCTGGAATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000118163.8
ENSMUST00000118600.8
ENSMUST00000127880.8