Pregenerated sensors for DMWD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030410Ensembl transcript IDs: ENSMUST00000032570.14, ENSMUST00000108479.2
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTaGGTGGAGGACAGGGCCAAGGCCACACAGGACACTACATCCCCA | + |
Preference number: 1 (lower is better) Translates to: WLTLMFQRTGHCTWQ*VEDRAKATQDTTSP Trigger: TGGGGATGTAGTGTCCTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR CCA 90 bp | GGGATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTaGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGGACACTACA | + |
Preference number: 1 (lower is better) Translates to: GIWLTLMFQRTGHCT*QWVEDRAKATQDTT Trigger: TGTAGTGTCCTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR-3UTR CCA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGACAGCGGGGAGGGTTATaGCTAGGAGGCCGGGAACAT | + |
Preference number: 2 (lower is better) Translates to: APALPSHPGVLWAKSLPGQRGGL*LGGREH Trigger: ATGTTCCCGGCCTCCTAGCCATAACCCTCCCCGCTG...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR-3UTR CCA 90 bp | AGGGCCAAGGCCACACAGGACACTACATCCCCATGGCTGGGCCAACCTAGGGGACAGCGGGGAGGGTTATaGCTAGGAGGCCGGGAACAT | + |
Preference number: 2 (lower is better) Translates to: RAKATQDTTSPWLGQPRGQRGGL*LGGREH Trigger: ATGTTCCCGGCCTCCTAGCCATAACCCTCCCCGCTG...TCCCCTAGGTTGGCCCAGCCATGGGGATGTAGTGTCCTGTGTGGCCTTGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR-3UTR CCA 90 bp | CACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGTGAACAGTCACATGCTGCTACATCCCCATGGCTaGGCCAACCTAGGGGACCCC | + |
Preference number: 2 (lower is better) Translates to: HPGVLWAKSLPGVNSHMLLHPHG*ANLGDP Trigger: GGGGTCCCCTAGGTTGGCCCAGCCATGGGGATGTAG...CAGCATGTGACTGTTCACTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR-3UTR TCA 90 bp | CCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGGCAGTCCTTCCATCATaGTTAGTCTTGTTAATACAG | + |
Preference number: 2 (lower is better) Translates to: PLPCPLTQGYCGLSLSQEAVLPS*LVLLIQ Trigger: CTGTATTAACAAGACTAATCATGATGGAAGGACTGC...CTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR-3UTR CCA 90 bp | GAGGTCCAGGGGAACAAGGAGGGCCCTCAGGGCTTCCATAATTTAACACTTTCAGACCATAGCAAGGGGTaGAGTTTGGGCAGGAGTGGG | + |
Preference number: 2 (lower is better) Translates to: EVQGNKEGPQGFHNLTLSDHSKG*SLGRSG Trigger: CCCACTCCTGCCCAAACTCCACCCCTTGCTATGGTC...TGAAAGTGTTAAATTATGGAAGCCCTGAGGGCCCTCCTTGTTCCCCTGGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR-3UTR TCA 90 bp | CAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACAGTCTTGTTAATACAGTaGTTCTTGAGGTCAGCGGGG | + |
Preference number: 2 (lower is better) Translates to: QRTGHCTWQWVEDRAKATVLLIQ*FLRSAG Trigger: CCCCGCTGACCTCAAGAATCACTGTATTAACAAGAC...TGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR CAA 90 bp | TGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGTCATaGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGGA | + |
Preference number: 2 (lower is better) Translates to: WDRDMVNTDVSENRS*YLAVGGGQGQGHTG Trigger: TCCTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR-3UTR CCA 90 bp | GAACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACACTACATCCCCATGGCTaGGCCAACCTAGGGGACCCC | + |
Preference number: 2 (lower is better) Translates to: EQSHAGTGIWLTLMFQRTLHPHG*ANLGDP Trigger: GGGGTCCCCTAGGTTGGCCCAGCCATGGGGATGTAG...TGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR CAA 90 bp | AGGGATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTaGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGGACACTAC | + |
Preference number: 2 (lower is better) Translates to: RDMVNTDVSENRSLY*AVGGGQGQGHTGHY Trigger: GTAGTGTCCTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR-3UTR TCA 90 bp | CACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGTGAACAGTCACATGCTGGCAGTCCTTCCATCATaGTTAGTCTTGTTAATACAG | + |
Preference number: 2 (lower is better) Translates to: HPGVLWAKSLPGVNSHMLAVLPS*LVLLIQ Trigger: CTGTATTAACAAGACTAATCATGATGGAAGGACTGC...CAGCATGTGACTGTTCACTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR-3UTR TCA 90 bp | AACACTTTCAAAATCACAGACCATAGCAAGGGGTGGAGTTTGGGCAGGAGTGGGGTCTTGTTAATACAGTaGTTCTTGAGGTCAGCGGGG | + |
Preference number: 2 (lower is better) Translates to: NTFKITDHSKGWSLGRSGVLLIQ*FLRSAG Trigger: CCCCGCTGACCTCAAGAATCACTGTATTAACAAGAC...CCCACTCCTGCCCAAACTCCACCCCTTGCTATGGTCTGTGATTTTGAAAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR-3UTR CAA 90 bp | CCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGAACAGGTCATTGTACTaGGCAGTGGGTGGAGGACAG | + |
Preference number: 3 (lower is better) Translates to: PLPCPLTQGYCGLSLSQENRSLY*AVGGGQ Trigger: CTGTCCTCCACCCACTGCCAAGTACAATGACCTGTT...CTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR CCA 72 bp | TGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTaGAGGACAGGGCCAAGGCCACACAGGACACTACAT | + |
Preference number: 3 (lower is better) Translates to: CFREQVIVLGSG*RTGPRPHRTLH Trigger: ATGTAGTGTCCTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGACTAGGCGCACCAGGCTaGGGCGGACGGCGGGCAGCG | + |
Preference number: 4 (lower is better) Translates to: APALPSHPGVLWAKSLPGLGAPG*GGRRAA Trigger: CGCTGCCCGCCGTCCGCCTCAGCCTGGTGCGCCTAG...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGGCCCAGCACCTTAGCTaGGTCCAATCGGCTTCGGGG | + |
Preference number: 4 (lower is better) Translates to: PLPCPLTQGYCGLSLSQEAQHLS*VQSASG Trigger: CCCCGAAGCCGATTGGACCCAGCTAAGGTGCTGGGC...CTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAACTGGGGGAGCTGCCTaGTTGGGAGGAGATGCCCTC | + |
Preference number: 4 (lower is better) Translates to: APALPSHPGVLWAKSLPGTGGAA*LGGDAL Trigger: GAGGGCATCTCCTCCCAACCAGGCAGCTCCCCCAGT...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS-3UTR TCA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGATGCGAAACTGCGACTTaGTCTCCGCGCAGTCGCCCA | + |
Preference number: 4 (lower is better) Translates to: APALPSHPGVLWAKSLPGCETAT*SPRSRP Trigger: TGGGCGACTGCGCGGAGATCAAGTCGCAGTTTCGCA...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGTTGACCCAGGACTTGTaGCCATGGCCTCGAGCCACC | + |
Preference number: 4 (lower is better) Translates to: PLPCPLTQGYCGLSLSQELTQDL*PWPRAT Trigger: GGTGGCTCGAGGCCATGGCCACAAGTCCTGGGTCAA...CTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGGAGAGGCTCCAGCAGTaGCACCTCATGGATCCGAGG | + |
Preference number: 4 (lower is better) Translates to: PLPCPLTQGYCGLSLSQEERLQQ*HLMDPR Trigger: CCTCGGATCCATGAGGTGCCACTGCTGGAGCCTCTC...CTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGGGGGAGCTGCCTGGTTaGGAGGAGATGCCCTCTACA | + |
Preference number: 4 (lower is better) Translates to: PLPCPLTQGYCGLSLSQEGELPG*EEMPST Trigger: TGTAGAGGGCATCTCCTCCCAACCAGGCAGCTCCCC...CTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS-3UTR GCA 90 bp | AGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGAGGAGATGCCCGCCTTaGCTGGCCGGGCCCAGGTGC | + |
Preference number: 4 (lower is better) Translates to: RTGHCTWQWVEDRAKATQRRCPP*LAGPRC Trigger: GCACCTGGGCCCGGCCAGGCAAGGCGGGCATCTCCT...CTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGCGCAGGCAGCCATCCTaGCTGACACAGGCTAAGTGT | + |
Preference number: 4 (lower is better) Translates to: PLPCPLTQGYCGLSLSQERRQPS*LTQAKC Trigger: ACACTTAGCCTGTGTCAGCCAGGATGGCTGCCTGCG...CTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAAGAATGCAAACTCATTaGGGGGCCCCTCACCCACTG | + |
Preference number: 4 (lower is better) Translates to: APALPSHPGVLWAKSLPGRMQTH*GAPHPL Trigger: CAGTGGGTGAGGGGCCCCTCAATGAGTTTGCATTCT...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGACAAAGGCTACAGCGTTaGCCCAGGACTTGTGGCCAT | + |
Preference number: 4 (lower is better) Translates to: APALPSHPGVLWAKSLPGQRLQR*PRTCGH Trigger: ATGGCCACAAGTCCTGGGTCAACGCTGTAGCCTTTG...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGGTGGCAGCTGTGAACTaGTTGAAGTCGTGGCAGGTG | + |
Preference number: 4 (lower is better) Translates to: PLPCPLTQGYCGLSLSQEVAAVN*LKSWQV Trigger: CACCTGCCACGACTTCAACCAGTTCACAGCTGCCAC...CTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | AGGGCCAAGGCCACACAGGACACTACATCCCCATGGCTGGGCCAACCTAGGGGACAGACTATACTGGGGTaGGGTGGAGGTGCAGGGGTG | + |
Preference number: 4 (lower is better) Translates to: RAKATQDTTSPWLGQPRGQTILG*GGGAGV Trigger: CACCCCTGCACCTCCACCCCACCCCAGTATAGTCTG...TCCCCTAGGTTGGCCCAGCCATGGGGATGTAGTGTCCTGTGTGGCCTTGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGATTCAGCAGACTATACTaGGGTGGGGTGGAGGTGCAG | + |
Preference number: 4 (lower is better) Translates to: APALPSHPGVLWAKSLPGFSRLY*GGVEVQ Trigger: CTGCACCTCCACCCCACCCCAGTATAGTCTGCTGAA...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GGGACCCCCAGTATGTGTGCAGCGTGGGGCTTGGAGCAGTCCTTCCATCATGATGGGGAGCTGCCTGGTTaGGAGGAGATGCCCGCCTTG | + |
Preference number: 4 (lower is better) Translates to: GTPSMCAAWGLEQSFHHDGELPG*EEMPAL Trigger: CAAGGCGGGCATCTCCTCCCAACCAGGCAGCTCCCC...ATCATGATGGAAGGACTGCTCCAAGCCCCACGCTGCACACATACTGGGGGTCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAAGAGCACATCTTCTGTaGGGTCCCACAGGCAGAACT | + |
Preference number: 4 (lower is better) Translates to: APALPSHPGVLWAKSLPGRAHLL*GPTGRT Trigger: AGTTCTGCCTGTGGGACCTCACAGAAGATGTGCTCT...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAACTTGGCTAGTGGATTaGGGGGTGCCTTGCTTTTGG | + |
Preference number: 4 (lower is better) Translates to: APALPSHPGVLWAKSLPGTWLVD*GVPCFW Trigger: CCAAAAGCAAGGCACCCCGCAATCCACTAGCCAAGT...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | AGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGACTGGGGGAGCTGCCTaGTTGGGAGGAGATGCCCGC | + |
Preference number: 4 (lower is better) Translates to: RTGHCTWQWVEDRAKATQTGGAA*LGGDAR Trigger: GCGGGCATCTCCTCCCAACCAGGCAGCTCCCCCAGT...CTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GGGACCCCCAGTATGTGTGCAGCGTGGGGCTTGGAGCAGTCCTTCCATCATGATGGTGTGGGAGACTGTTaGAACGAGACAGGGAGCGGG | + |
Preference number: 4 (lower is better) Translates to: GTPSMCAAWGLEQSFHHDGVGDC*NETGSG Trigger: CCCGCTCCCTGTCTCGTTCCAACAGTCTCCCACACC...ATCATGATGGAAGGACTGCTCCAAGCCCCACGCTGCACACATACTGGGGGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGTGAACAGTCACATGCTGGCCCAGCACCTTAGCTaGGTCCAATCGGCTTCGGGG | + |
Preference number: 4 (lower is better) Translates to: HPGVLWAKSLPGVNSHMLAQHLS*VQSASG Trigger: CCCCGAAGCCGATTGGACCCAGCTAAGGTGCTGGGC...CAGCATGTGACTGTTCACTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | AGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGCTTGCTTGCCCTGCCTaGGCCTCGGTCTCCTCGTCT | + |
Preference number: 4 (lower is better) Translates to: RTGHCTWQWVEDRAKATQLACPA*ASVSSS Trigger: AGACGAGGAGACCGAGGCCCAGGCAGGGCAAGCAAG...CTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS-3UTR TCA 90 bp | AGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGTGGGGCTCCTGTGTCTaGGCTGGTGACTTCAGGCTC | + |
Preference number: 4 (lower is better) Translates to: RTGHCTWQWVEDRAKATQWGSCV*AGDFRL Trigger: GAGCCTGAAGTCACCAGCTCAGACACAGGAGCCCCA...CTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | CACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGTGAACAGTCACATGCTGAGCCAAAGCGGTACGTaGTGGAGCCAGCCTTGGGCA | + |
Preference number: 4 (lower is better) Translates to: HPGVLWAKSLPGVNSHMLSQSGT*WSQPWA Trigger: TGCCCAAGGCTGGCTCCATCACGTACCGCTTTGGCT...CAGCATGTGACTGTTCACTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | AGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGTCGCGGGTGCGAAACTaGGACTTGATCTCCGCGCAG | + |
Preference number: 4 (lower is better) Translates to: RTGHCTWQWVEDRAKATQSRVRN*DLISAQ Trigger: CTGCGCGGAGATCAAGTCGCAGTTTCGCACCCGCGA...CTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | AGGGCCAAGGCCACACAGGACACTACATCCCCATGGCTGGGCCAACCTAGGGGAGGGGTGCCTTGCTTTTaGCTGCATAGACAGCAAAGC | + |
Preference number: 4 (lower is better) Translates to: RAKATQDTTSPWLGQPRGGVPCF*LHRQQS Trigger: GCTTTGCTGTCTATGCAGCCAAAAGCAAGGCACCCC...TCCCCTAGGTTGGCCCAGCCATGGGGATGTAGTGTCCTGTGTGGCCTTGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GGGACCCCCAGTATGTGTGCAGCGTGGGGCTTGGAGCAGTCCTTCCATCATGATCTTGCCACCACCAGCTaGGTGTGGGAGACTGTTGGA | + |
Preference number: 4 (lower is better) Translates to: GTPSMCAAWGLEQSFHHDLATTS*VWETVG Trigger: TCCAACAGTCTCCCACACCCAGCTGGTGGTGGCAAG...ATCATGATGGAAGGACTGCTCCAAGCCCCACGCTGCACACATACTGGGGGTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | AGTGAACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGACTAGGCGCACCAGGCTaGGGCGGACGGCGGGCAGCG | + |
Preference number: 4 (lower is better) Translates to: SEQSHAGTGIWLTLMFQRLGAPG*GGRRAA Trigger: CGCTGCCCGCCGTCCGCCTCAGCCTGGTGCGCCTAG...TCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGTTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | AGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGCAGAACTGTGTGTCCTaGCCAGCTGAGCCAAAGCGG | + |
Preference number: 4 (lower is better) Translates to: RTGHCTWQWVEDRAKATQQNCVS*PAEPKR Trigger: CCGCTTTGGCTCAGCTGGCCAGGACACACAGTTCTG...CTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGAACTGTGTGTCCTaGCCAGCTGAGCCAAAGCGG | + |
Preference number: 4 (lower is better) Translates to: QRTGHCTWQWVEDRAKATQNCVS*PAEPKR Trigger: CCGCTTTGGCTCAGCTGGCCAGGACACACAGTTCTG...TGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | AGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGAGAATGCAAACTCATTaGGGGGCCCCTCACCCACTG | + |
Preference number: 4 (lower is better) Translates to: RTGHCTWQWVEDRAKATQRMQTH*GAPHPL Trigger: CAGTGGGTGAGGGGCCCCTCAATGAGTTTGCATTCT...CTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
||
CDS-3UTR TCA 90 bp | CACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGTGAACAGTCACATGCTGCAAAGCGGCCAATGCTaGATGGTATGCCAGGCTCCA | + |
Preference number: 4 (lower is better) Translates to: HPGVLWAKSLPGVNSHMLQSGQC*MVCQAP Trigger: TGGAGCCTGGCATACCATTCAGCATTGGCCGCTTTG...CAGCATGTGACTGTTCACTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | AGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGACGGTCAGGCGTTCCTaGGCAATCTTCTTGCACACG | + |
Preference number: 4 (lower is better) Translates to: RTGHCTWQWVEDRAKATQTVRRS*AIFLHT Trigger: CGTGTGCAAGAAGATTGCTCAGGAACGCCTGACCGT...CTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
||
CDS-3UTR CCA 90 bp | AGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGGGTACAGGTGGCCACTaGCGTGAGAAGCAAGGAACA | + |
Preference number: 4 (lower is better) Translates to: RTGHCTWQWVEDRAKATQGTGGH*REKQGT Trigger: TGTTCCTTGCTTCTCACGCCAGTGGCCACCTGTACC...CTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | AGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACAGTTCAGCAGACTATACTaGGGTGGGGTGGAGGTGCAG | + |
Preference number: 4 (lower is better) Translates to: RTGHCTWQWVEDRAKATQFSRLY*GGVEVQ Trigger: CTGCACCTCCACCCCACCCCAGTATAGTCTGCTGAA...CTGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
||
CDS-3UTR TCA 90 bp | CACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGTGAACAGTCACATGCTGAGAGCACATCTTCTGTaGGGTCCCACAGGCAGAACT | + |
Preference number: 4 (lower is better) Translates to: HPGVLWAKSLPGVNSHMLRAHLL*GPTGRT Trigger: AGTTCTGCCTGTGGGACCTCACAGAAGATGTGCTCT...CAGCATGTGACTGTTCACTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GAGGTCCAGGGGAACAAGGAGGGCCCTCAGGGCTTCCATAATTTAACACTTTCACAGACTATACTGGGGTaGGGTGGAGGTGCAGGGGTG | + |
Preference number: 4 (lower is better) Translates to: EVQGNKEGPQGFHNLTLSQTILG*GGGAGV Trigger: CACCCCTGCACCTCCACCCCACCCCAGTATAGTCTG...TGAAAGTGTTAAATTATGGAAGCCCTGAGGGCCCTCCTTGTTCCCCTGGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GAGGTCCAGGGGAACAAGGAGGGCCCTCAGGGCTTCCATAATTTAACACTTTCATTGACCCAGGACTTGTaGCCATGGCCTCGAGCCACC | + |
Preference number: 4 (lower is better) Translates to: EVQGNKEGPQGFHNLTLSLTQDL*PWPRAT Trigger: GGTGGCTCGAGGCCATGGCCACAAGTCCTGGGTCAA...TGAAAGTGTTAAATTATGGAAGCCCTGAGGGCCCTCCTTGTTCCCCTGGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | TGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCAAAGGCTACAGCGTTaGCCCAGGACTTGTGGCCAT | + |
Preference number: 4 (lower is better) Translates to: CFREQVIVLGSGWRTGPRQRLQR*PRTCGH Trigger: ATGGCCACAAGTCCTGGGTCAACGCTGTAGCCTTTG...CCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | TTAACACTTTCAAAATCACAGACCATAGCAAGGGGTGGAGTTTGGGCAGGAGTGCGGTCCCGCCGCTCCTaGAGGGTCAGTGTGGCAAAG | + |
Preference number: 4 (lower is better) Translates to: LTLSKSQTIARGGVWAGVRSRRS*RVSVAK Trigger: CTTTGCCACACTGACCCTGCAGGAGCGGCGGGACCG...CACTCCTGCCCAAACTCCACCCCTTGCTATGGTCTGTGATTTTGAAAGTGTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | AACACTTTCAAAATCACAGACCATAGCAAGGGGTGGAGTTTGGGCAGGAGTGGGCAGGACTTGTGGCCATaGCCTCGAGCCACCACACGA | + |
Preference number: 4 (lower is better) Translates to: NTFKITDHSKGWSLGRSGQDLWP*PRATTR Trigger: TCGTGTGGTGGCTCGAGGCCATGGCCACAAGTCCTG...CCCACTCCTGCCCAAACTCCACCCCTTGCTATGGTCTGTGATTTTGAAAGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
||
CDS-3UTR TCA 90 bp | AACACTTTCAAAATCACAGACCATAGCAAGGGGTGGAGTTTGGGCAGGAGTGGGAGGTGGCCACTGGCGTaGGAAGCAAGGAACAGACTC | + |
Preference number: 4 (lower is better) Translates to: NTFKITDHSKGWSLGRSGRWPLA*EARNRL Trigger: GAGTCTGTTCCTTGCTTCTCACGCCAGTGGCCACCT...CCCACTCCTGCCCAAACTCCACCCCTTGCTATGGTCTGTGATTTTGAAAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | TGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGCAAAGTAGCTCTTCATaGGCCCACGCAGAAGCATGC | + |
Preference number: 4 (lower is better) Translates to: CFREQVIVLGSGWRTGPRQSSSS*AHAEAC Trigger: GCATGCTTCTGCGTGGGCTCATGAAGAGCTACTTTG...CCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | ATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGTCCATCAGCACTGGCTaGCGCCGCCTCCTCTGCGCG | + |
Preference number: 4 (lower is better) Translates to: IWLTLMFQRTGHCTWQWVSISTG*RRLLCA Trigger: CGCGCAGAGGAGGCGGCGTCAGCCAGTGCTGATGGA...CACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | AACACTTTCAAAATCACAGACCATAGCAAGGGGTGGAGTTTGGGCAGGAGTGGGTGTGTCCTGGCCAGCTaGGCCAAAGCGGTACGTGAT | + |
Preference number: 4 (lower is better) Translates to: NTFKITDHSKGWSLGRSGCVLAS*AKAVRD Trigger: ATCACGTACCGCTTTGGCTCAGCTGGCCAGGACACA...CCCACTCCTGCCCAAACTCCACCCCTTGCTATGGTCTGTGATTTTGAAAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | ATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGACGGTCCCGCCGCTCCTaGAGGGTCAGTGTGGCAAAG | + |
Preference number: 4 (lower is better) Translates to: MVNTDVSENRSLYLAVGGRSRRS*RVSVAK Trigger: CTTTGCCACACTGACCCTGCAGGAGCGGCGGGACCG...TCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | AACACTTTCAAAATCACAGACCATAGCAAGGGGTGGAGTTTGGGCAGGAGTGGGCGCAGGCAGCCATCCTaGCTGACACAGGCTAAGTGT | + |
Preference number: 4 (lower is better) Translates to: NTFKITDHSKGWSLGRSGRRQPS*LTQAKC Trigger: ACACTTAGCCTGTGTCAGCCAGGATGGCTGCCTGCG...CCCACTCCTGCCCAAACTCCACCCCTTGCTATGGTCTGTGATTTTGAAAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GAGGTCCAGGGGAACAAGGAGGGCCCTCAGGGCTTCCATAATTTAACACTTTCACCTCCTCTTCACCACTaGGATCTCCATCAGCACTGG | + |
Preference number: 4 (lower is better) Translates to: EVQGNKEGPQGFHNLTLSPPLHH*DLHQHW Trigger: CCAGTGCTGATGGAGATCCCAGTGGTGAAGAGGAGG...TGAAAGTGTTAAATTATGGAAGCCCTGAGGGCCCTCCTTGTTCCCCTGGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | ACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGACACCACAGTGCCACTaGGGGAGCTGCCTGGTTGGG | + |
Preference number: 4 (lower is better) Translates to: TVTCWDRDMVNTDVSENRTPQCH*GSCLVG Trigger: CCCAACCAGGCAGCTCCCCCAGTGGCACTGTGGTGT...CCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | TGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGTGCGAAACTGCGACTTaGTCTCCGCGCAGTCGCCCA | + |
Preference number: 4 (lower is better) Translates to: WLTLMFQRTGHCTWQWVECETAT*SPRSRP Trigger: TGGGCGACTGCGCGGAGATCAAGTCGCAGTTTCGCA...CTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | TGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGAAGGAACAGACTCTCTaGCTCAGGCAGCCACTTCAA | + |
Preference number: 4 (lower is better) Translates to: CFREQVIVLGSGWRTGPRKEQTL*LRQPLQ Trigger: TTGAAGTGGCTGCCTGAGTCAGAGAGTCTGTTCCTT...CCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | GCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGTCCATCAGCACTGGCTaGCGCCGCCTCCTCTGCGCG | + |
Preference number: 4 (lower is better) Translates to: AWSSPSIMISLVNTVILESISTG*RRLLCA Trigger: CGCGCAGAGGAGGCGGCGTCAGCCAGTGCTGATGGA...CTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | TGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGTGCCTTGCTTTTGGCTaGATAGACAGCAAAGCCCTC | + |
Preference number: 4 (lower is better) Translates to: CFREQVIVLGSGWRTGPRCLAFG*IDSKAL Trigger: GAGGGCTTTGCTGTCTATGCAGCCAAAAGCAAGGCA...CCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | GAGGTCCAGGGGAACAAGGAGGGCCCTCAGGGCTTCCATAATTTAACACTTTCAACTTGGCTAGTGGATTaGGGGGTGCCTTGCTTTTGG | + |
Preference number: 4 (lower is better) Translates to: EVQGNKEGPQGFHNLTLSTWLVD*GVPCFW Trigger: CCAAAAGCAAGGCACCCCGCAATCCACTAGCCAAGT...TGAAAGTGTTAAATTATGGAAGCCCTGAGGGCCCTCCTTGTTCCCCTGGACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | ACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGCAGGACTTGTGGCCATaGCCTCGAGCCACCACACGA | + |
Preference number: 4 (lower is better) Translates to: TVTCWDRDMVNTDVSENRQDLWP*PRATTR Trigger: TCGTGTGGTGGCTCGAGGCCATGGCCACAAGTCCTG...CCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GAACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACACAGAAGCTGGTGGGGTaGCACCAGGTGTGCCCGGAA | + |
Preference number: 4 (lower is better) Translates to: EQSHAGTGIWLTLMFQRTQKLVG*HQVCPE Trigger: TTCCGGGCACACCTGGTGCCACCCCACCAGCTTCTG...TGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | ATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGACAGAAGCTGGTGGGGTaGCACCAGGTGTGCCCGGAA | + |
Preference number: 4 (lower is better) Translates to: MVNTDVSENRSLYLAVGGQKLVG*HQVCPE Trigger: TTCCGGGCACACCTGGTGCCACCCCACCAGCTTCTG...TCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | ACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGGGTGTGGGAGACTGTTaGAACGAGACAGGGAGCGGG | + |
Preference number: 4 (lower is better) Translates to: TVTCWDRDMVNTDVSENRGVGDC*NETGSG Trigger: CCCGCTCCCTGTCTCGTTCCAACAGTCTCCCACACC...CCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GAACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACATGTGAACGCCTTGCCTaGCCGGGCCCAGGTGCAGAT | + |
Preference number: 4 (lower is better) Translates to: EQSHAGTGIWLTLMFQRTCERLA*PGPGAD Trigger: ATCTGCACCTGGGCCCGGCCAGGCAAGGCGTTCACA...TGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS-3UTR TCA 90 bp | ATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGATGGGGCTCCTGTGTCTaGGCTGGTGACTTCAGGCTC | + |
Preference number: 4 (lower is better) Translates to: MVNTDVSENRSLYLAVGGWGSCV*AGDFRL Trigger: GAGCCTGAAGTCACCAGCTCAGACACAGGAGCCCCA...TCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | AGTGAACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGACGGGCCAGAGACGGATaGGGGGAGAGCACATCTTCT | + |
Preference number: 4 (lower is better) Translates to: SEQSHAGTGIWLTLMFQRRARDG*GESTSS Trigger: AGAAGATGTGCTCTCCCCTCATCCGTCTCTGGCCCG...TCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGTTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | CGTGGGGCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTTCGCGGGTGCGAAACTaGGACTTGATCTCCGCGCAG | + |
Preference number: 4 (lower is better) Translates to: RGAWSSPSIMISLVNTVISRVRN*DLISAQ Trigger: CTGCGCGGAGATCAAGTCGCAGTTTCGCACCCGCGA...AATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGCCCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | AGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCAGCGGGCCAACTTGCTTGCCCTaGCTGGGCCTCGGTCTCCTC | + |
Preference number: 4 (lower is better) Translates to: SPSIMISLVNTVILEVSGPTCLP*LGLGLL Trigger: GAGGAGACCGAGGCCCAGGCAGGGCAAGCAAGTTGG...CCCGCTGACCTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS-3UTR CCA 90 bp | CATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTAACTGGTTGAAGTCGTaGCAGGTGGGCTGGGTCCCC | + |
Preference number: 4 (lower is better) Translates to: HAGTGIWLTLMFQRTGHCNWLKS*QVGWVP Trigger: GGGGACCCAGCCCACCTGCCACGACTTCAACCAGTT...ACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | ATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAAACTGGTTGAAGTCGTaGCAGGTGGGCTGGGTCCCC | + |
Preference number: 4 (lower is better) Translates to: MVNTDVSENRSLYLAVGGNWLKS*QVGWVP Trigger: GGGGACCCAGCCCACCTGCCACGACTTCAACCAGTT...TCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTCACCCACTGCCCACTTaGCTAGTGGATTGCGGGGTG | + |
Preference number: 4 (lower is better) Translates to: HAGTGIWLTLMFQRTGHCHPLPT*LVDCGV Trigger: CACCCCGCAATCCACTAGCCAAGTGGGCAGTGGGTG...ACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CGTGGGGCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTACTACCAGAAGCTGGTaGGGTGGCACCAGGTGTGCC | + |
Preference number: 4 (lower is better) Translates to: RGAWSSPSIMISLVNTVITTRSW*GGTRCA Trigger: GGCACACCTGGTGCCACCCCACCAGCTTCTGGTAGT...AATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGCCCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CGTGGGGCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTGAGAGGCTCCAGCAGTaGCACCTCATGGATCCGAGG | + |
Preference number: 4 (lower is better) Translates to: RGAWSSPSIMISLVNTVIERLQQ*HLMDPR Trigger: CCTCGGATCCATGAGGTGCCACTGCTGGAGCCTCTC...AATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGCCCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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3UTR CAA 72 bp | GTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTaGGCAGTGGGTGGAGGACAGGGCCAAGGCCACACA | + |
Preference number: 4 (lower is better) Translates to: VNTDVSENRSLY*AVGGGQGQGHT Trigger: TGTGTGGCCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | GAACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAAGGTGGCCACTGGCGTaGGAAGCAAGGAACAGACTC | + |
Preference number: 4 (lower is better) Translates to: EQSHAGTGIWLTLMFQRTRWPLA*EARNRL Trigger: GAGTCTGTTCCTTGCTTCTCACGCCAGTGGCCACCT...TGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | ATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGAGCCAAAGCGGTACGTaGTGGAGCCAGCCTTGGGCA | + |
Preference number: 4 (lower is better) Translates to: IWLTLMFQRTGHCTWQWVSQSGT*WSQPWA Trigger: TGCCCAAGGCTGGCTCCATCACGTACCGCTTTGGCT...CACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | GATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTCGGGCCAGAGACGGATaGGGGGAGAGCACATCTTCT | + |
Preference number: 4 (lower is better) Translates to: DMVNTDVSENRSLYLAVGRARDG*GESTSS Trigger: AGAAGATGTGCTCTCCCCTCATCCGTCTCTGGCCCG...ACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | TGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGAGAACTACCAGAAGCTaGTGGGGTGGCACCAGGTGT | + |
Preference number: 4 (lower is better) Translates to: WLTLMFQRTGHCTWQWVERTTRS*WGGTRC Trigger: ACACCTGGTGCCACCCCACCAGCTTCTGGTAGTTCT...CTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | TTAACACTTTCAAAATCACAGACCATAGCAAGGGGTGGAGTTTGGGCAGGAGTGACCACCAGCTGGGTGTaGGAGACTGTTGGAACGAGA | + |
Preference number: 4 (lower is better) Translates to: LTLSKSQTIARGGVWAGVTTSWV*ETVGTR Trigger: TCTCGTTCCAACAGTCTCCCACACCCAGCTGGTGGT...CACTCCTGCCCAAACTCCACCCCTTGCTATGGTCTGTGATTTTGAAAGTGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | ACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGGCGGCCAATGCTGAATaGTATGCCAGGCTCCATCGA | + |
Preference number: 4 (lower is better) Translates to: TVTCWDRDMVNTDVSENRAANAE*YARLHR Trigger: TCGATGGAGCCTGGCATACCATTCAGCATTGGCCGC...CCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | AACACTTTCAAAATCACAGACCATAGCAAGGGGTGGAGTTTGGGCAGGAGTGGGCAGATGAGGCCCTCTTaGCAGGCAGTGATGATACAA | + |
Preference number: 4 (lower is better) Translates to: NTFKITDHSKGWSLGRSGQMRPS*QAVMIQ Trigger: TTGTATCATCACTGCCTGCCAAGAGGGCCTCATCTG...CCCACTCCTGCCCAAACTCCACCCCTTGCTATGGTCTGTGATTTTGAAAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | TGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCACACCACAGTGCCACTaGGGGAGCTGCCTGGTTGGG | + |
Preference number: 4 (lower is better) Translates to: WSSPSIMISLVNTVILEVTPQCH*GSCLVG Trigger: CCCAACCAGGCAGCTCCCCCAGTGGCACTGTGGTGT...GACCTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | ATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCAGCGGGGAGGGTTATCACCCACTGCCCACTTaGCTAGTGGATTGCGGGGTG | + |
Preference number: 4 (lower is better) Translates to: IMISLVNTVILEVSGEGYHPLPT*LVDCGV Trigger: CACCCCGCAATCCACTAGCCAAGTGGGCAGTGGGTG...ATAACCCTCCCCGCTGACCTCAAGAATCACTGTATTAACAAGACTAATCATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | ACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGAGCATGCTGTCAAAGTaGAAGACACGCAGGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: TVTCWDRDMVNTDVSENRSMLSK*KTRRQP Trigger: TGGCTGCCTGCGTGTCTTCCACTTTGACAGCATGCT...CCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CGTGGGGCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCCTCCTCTTCACCACTaGGATCTCCATCAGCACTGG | + |
Preference number: 4 (lower is better) Translates to: RGAWSSPSIMISLVNTVIPPLHH*DLHQHW Trigger: CCAGTGCTGATGGAGATCCCAGTGGTGAAGAGGAGG...AATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGCCCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | TGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCACTACCAGAAGCTGGTaGGGTGGCACCAGGTGTGCC | + |
Preference number: 4 (lower is better) Translates to: WSSPSIMISLVNTVILEVTTRSW*GGTRCA Trigger: GGCACACCTGGTGCCACCCCACCAGCTTCTGGTAGT...GACCTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | ATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGCGGCCAATGCTGAATaGTATGCCAGGCTCCATCGA | + |
Preference number: 4 (lower is better) Translates to: MVNTDVSENRSLYLAVGGAANAE*YARLHR Trigger: TCGATGGAGCCTGGCATACCATTCAGCATTGGCCGC...TCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | GCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGTGTGTCCTGGCCAGCTaGGCCAAAGCGGTACGTGAT | + |
Preference number: 4 (lower is better) Translates to: AWSSPSIMISLVNTVILECVLAS*AKAVRD Trigger: ATCACGTACCGCTTTGGCTCAGCTGGCCAGGACACA...CTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | GATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTCAAAGCGGCCAATGCTaGATGGTATGCCAGGCTCCA | + |
Preference number: 4 (lower is better) Translates to: DMVNTDVSENRSLYLAVGQSGQC*MVCQAP Trigger: TGGAGCCTGGCATACCATTCAGCATTGGCCGCTTTG...ACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | AGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCAGCGGGACGGTCAGGCGTTCCTaGGCAATCTTCTTGCACACG | + |
Preference number: 4 (lower is better) Translates to: SPSIMISLVNTVILEVSGTVRRS*AIFLHT Trigger: CGTGTGCAAGAAGATTGCTCAGGAACGCCTGACCGT...CCCGCTGACCTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | TTAACACTTTCAAAATCACAGACCATAGCAAGGGGTGGAGTTTGGGCAGGAGTGTGCCTTGCTTTTGGCTaGATAGACAGCAAAGCCCTC | + |
Preference number: 4 (lower is better) Translates to: LTLSKSQTIARGGVWAGVCLAFG*IDSKAL Trigger: GAGGGCTTTGCTGTCTATGCAGCCAAAAGCAAGGCA...CACTCCTGCCCAAACTCCACCCCTTGCTATGGTCTGTGATTTTGAAAGTGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | ATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGATTGCGGGGTGCCTTaGTTTTGGCTGCATAGACAG | + |
Preference number: 4 (lower is better) Translates to: MVNTDVSENRSLYLAVGGDCGVP*FWLHRQ Trigger: CTGTCTATGCAGCCAAAAGCAAGGCACCCCGCAATC...TCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTGGGGTGCCTTGCTTTTaGCTGCATAGACAGCAAAGC | + |
Preference number: 4 (lower is better) Translates to: HAGTGIWLTLMFQRTGHCGVPCF*LHRQQS Trigger: GCTTTGCTGTCTATGCAGCCAAAAGCAAGGCACCCC...ACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | CATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTAGCATGCTGTCAAAGTaGAAGACACGCAGGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: HAGTGIWLTLMFQRTGHCSMLSK*KTRRQP Trigger: TGGCTGCCTGCGTGTCTTCCACTTTGACAGCATGCT...ACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGCTTGCCACCACCAGCTaGGTGTGGGAGACTGTTGGA | + |
Preference number: 4 (lower is better) Translates to: AWSSPSIMISLVNTVILELATTS*VWETVG Trigger: TCCAACAGTCTCCCACACCCAGCTGGTGGTGGCAAG...CTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | TGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCACTTGCTGGGTGACCTaGGCCAACTTGCTTGCCCTG | + |
Preference number: 4 (lower is better) Translates to: WSSPSIMISLVNTVILEVTCWVT*ANLLAL Trigger: CAGGGCAAGCAAGTTGGCCCAGGTCACCCAGCAAGT...GACCTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS-3UTR TCA 90 bp | GATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTCAAAGTAGCTCTTCATaGGCCCACGCAGAAGCATGC | + |
Preference number: 4 (lower is better) Translates to: DMVNTDVSENRSLYLAVGQSSSS*AHAEAC Trigger: GCATGCTTCTGCGTGGGCTCATGAAGAGCTACTTTG...ACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR GCA 90 bp | TGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCCCTCTACAACTGACTTaGTGGGTGACCTGGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: WSSPSIMISLVNTVILEVPLQLT*WVTWAN Trigger: GTTGGCCCAGGTCACCCAGCAAGTCAGTTGTAGAGG...GACCTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS-3UTR CCA 90 bp | GCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTGGCAGCTGTGAACTaGTTGAAGTCGTGGCAGGTG | + |
Preference number: 4 (lower is better) Translates to: AWSSPSIMISLVNTVILEVAAVN*LKSWQV Trigger: CACCTGCCACGACTTCAACCAGTTCACAGCTGCCAC...CTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | GCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGAGAACTACCAGAAGCTaGTGGGGTGGCACCAGGTGT | + |
Preference number: 4 (lower is better) Translates to: AWSSPSIMISLVNTVILERTTRS*WGGTRC Trigger: ACACCTGGTGCCACCCCACCAGCTTCTGGTAGTTCT...CTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | TGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCACCACCAGCTGGGTGTaGGAGACTGTTGGAACGAGA | + |
Preference number: 4 (lower is better) Translates to: WSSPSIMISLVNTVILEVTTSWV*ETVGTR Trigger: TCTCGTTCCAACAGTCTCCCACACCCAGCTGGTGGT...GACCTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | ATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCAGCGGGGAGGGTTATAAGGAACAGACTCTCTaGCTCAGGCAGCCACTTCAA | + |
Preference number: 4 (lower is better) Translates to: IMISLVNTVILEVSGEGYKEQTL*LRQPLQ Trigger: TTGAAGTGGCTGCCTGAGTCAGAGAGTCTGTTCCTT...ATAACCCTCCCCGCTGACCTCAAGAATCACTGTATTAACAAGACTAATCATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CCA 90 bp | ATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCAGCGGGGAGGGTTATCAGATGAGGCCCTCTTaGCAGGCAGTGATGATACAA | + |
Preference number: 4 (lower is better) Translates to: IMISLVNTVILEVSGEGYQMRPS*QAVMIQ Trigger: TTGTATCATCACTGCCTGCCAAGAGGGCCTCATCTG...ATAACCCTCCCCGCTGACCTCAAGAATCACTGTATTAACAAGACTAATCATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR TCA 90 bp | TGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCTCAGCCGCTCTTCATTaGATAGCTTGCTGGTGTCTT | + |
Preference number: 4 (lower is better) Translates to: WSSPSIMISLVNTVILEVSAALH*IACWCL Trigger: AAGACACCAGCAAGCTATTCAATGAAGAGCGGCTGA...GACCTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 90 bp | CGGGGAGCAGCTTGTAGAAGCCCTCGCGGGTGCGAAACTGCGACTTaGTCTCCGCGCAGTCGCCCATGGCGGCGCTGGGGCCCGGGCCGC | + |
Preference number: 5 (lower is better) Translates to: RGAACRSPRGCETAT*SPRSRPWRRWGPGR Trigger: GCGGCCCGGGCCCCAGCGCCGCCATGGGCGACTGCGCGGAGATCAAGTCGCAGTTTCGCACCCGCGAGGGCTTCTACAAGCTGCTCCCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGAGGAGATGCCCGCCTaGCCTGGCCGGGCCCAGGTG | + |
Preference number: 5 (lower is better) Translates to: APALPSHPGVLWAKSLPGEEMPA*PGRAQV Trigger: CACCTGGGCCCGGCCAGGCAAGGCGGGCATCTCCTC...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108479.2 |
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CDS CCA 90 bp | CTGCACCTGTCTCTCCGGCCCGAGAACTACCAGAAGCTGGTGGGGTaGCACCAGGTGTGCCCGGAAGGGTGCGGGTACGGGCCAGAGACG | + |
Preference number: 5 (lower is better) Translates to: LHLSLRPENYQKLVG*HQVCPEGCGYGPET Trigger: CGTCTCTGGCCCGTACCCGCACCCTTCCGGGCACACCTGGTGCCACCCCACCAGCTTCTGGTAGTTCTCGGGCCGGAGAGACAGGTGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 90 bp | CATCGATGCACTAGGCCCACCAGCCTTGCCACCACCAGCTGGGTGTaGGAGACTGTTGGAACGAGACAGGGAGCGGGGCAGGGGGCCTGC | + |
Preference number: 5 (lower is better) Translates to: HRCTRPTSLATTSWV*ETVGTRQGAGQGAC Trigger: GCAGGCCCCCTGCCCCGCTCCCTGTCTCGTTCCAACAGTCTCCCACACCCAGCTGGTGGTGGCAAGGCTGGTGGGCCTAGTGCATCGATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 90 bp | AGGTGGGCTGGGTCCCCTTGTAGATCCGCTTGTCGATGGGCTTGTTaGGATCGATGGACCGCTGGCTCCCGCTGCGGCAGCAGCCGGGGT | + |
Preference number: 5 (lower is better) Translates to: RWAGSPCRSACRWAC*DRWTAGSRCGSSRG Trigger: ACCCCGGCTGCTGCCGCAGCGGGAGCCAGCGGTCCATCGATCTCAACAAGCCCATCGACAAGCGGATCTACAAGGGGACCCAGCCCACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 90 bp | AGGCTCCATCGATGCACTAGGCCCACCAGCCTTGCCACCACCAGCTaGGTGTGGGAGACTGTTGGAACGAGACAGGGAGCGGGGCAGGGG | + |
Preference number: 5 (lower is better) Translates to: RLHRCTRPTSLATTS*VWETVGTRQGAGQG Trigger: CCCCTGCCCCGCTCCCTGTCTCGTTCCAACAGTCTCCCACACCCAGCTGGTGGTGGCAAGGCTGGTGGGCCTAGTGCATCGATGGAGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | AGGGCCAAGGCCACACAGGACACTACATCCCCATGGCTGGGCCAACCTAGGGGACCTGGGCCAACTTGCTaGCCCTGCCTGGGCCTCGGT | + |
Preference number: 5 (lower is better) Translates to: RAKATQDTTSPWLGQPRGPGPTC*PCLGLG Trigger: ACCGAGGCCCAGGCAGGGCAAGCAAGTTGGCCCAGG...TCCCCTAGGTTGGCCCAGCCATGGGGATGTAGTGTCCTGTGTGGCCTTGGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS-3UTR CAA 90 bp | AGGGCCAAGGCCACACAGGACACTACATCCCCATGGCTGGGCCAACCTAGGGGAGGGGGAGCTGCCTGGTaGGGAGGAGATGCCCGCCTT | + |
Preference number: 5 (lower is better) Translates to: RAKATQDTTSPWLGQPRGGGAAW*GGDARL Trigger: AAGGCGGGCATCTCCTCCCAACCAGGCAGCTCCCCC...TCCCCTAGGTTGGCCCAGCCATGGGGATGTAGTGTCCTGTGTGGCCTTGGCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108479.2 |
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CDS GCA 90 bp | TGGGGGAGCTGCCTGGTTGGGAGGAGATGCCCTCTACAACTGACTTaGTGGGTGACCTGGGCCAACTTGCTTGCCCTGCCTGGGCCTCGG | + |
Preference number: 5 (lower is better) Translates to: WGSCLVGRRCPLQLT*WVTWANLLALPGPR Trigger: CCGAGGCCCAGGCAGGGCAAGCAAGTTGGCCCAGGTCACCCAGCAAGTCAGTTGTAGAGGGCATCTCCTCCCAACCAGGCAGCTCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS TCA 90 bp | GCACCAGGTGTGCCCGGAAGGGTGCGGGTACGGGCCAGAGACGGATaGGGGGAGAGCACATCTTCTGTGAGGTCCCACAGGCAGAACTGT | + |
Preference number: 5 (lower is better) Translates to: APGVPGRVRVRARDG*GESTSSVRSHRQNC Trigger: ACAGTTCTGCCTGTGGGACCTCACAGAAGATGTGCTCTCCCCTCATCCGTCTCTGGCCCGTACCCGCACCCTTCCGGGCACACCTGGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 90 bp | CCGCCGCTCCTGCAGGGTCAGTGTGGCAAAGCGGCCAATGCTGAATaGTATGCCAGGCTCCATCGATGCACTAGGCCCACCAGCCTTGCC | + |
Preference number: 5 (lower is better) Translates to: PPLLQGQCGKAANAE*YARLHRCTRPTSLA Trigger: GGCAAGGCTGGTGGGCCTAGTGCATCGATGGAGCCTGGCATACCATTCAGCATTGGCCGCTTTGCCACACTGACCCTGCAGGAGCGGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | GCCCCTGCCCTGCCCTCTCACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGAGAATGCAAACTCATaGAGGGGCCCCTCACCCACT | + |
Preference number: 5 (lower is better) Translates to: APALPSHPGVLWAKSLPGENANS*RGPSPT Trigger: AGTGGGTGAGGGGCCCCTCAATGAGTTTGCATTCTC...TCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTGAGAGGGCAGGGCAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 90 bp | CAGCCTTGGGCAGTGGGGACACTGGGGCTCCTGTGTCTGAGCTGGTaGCTTCAGGCTCCTCCTCTTCACCACTGGGATCTCCATCAGCAC | + |
Preference number: 5 (lower is better) Translates to: QPWAVGTLGLLCLSW*LQAPPLHHWDLHQH Trigger: GTGCTGATGGAGATCCCAGTGGTGAAGAGGAGGAGCCTGAAGTCACCAGCTCAGACACAGGAGCCCCAGTGTCCCCACTGCCCAAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS GCA 90 bp | TGTGGCAAAGCGGCCAATGCTGAATGGTATGCCAGGCTCCATCGATaGACTAGGCCCACCAGCCTTGCCACCACCAGCTGGGTGTGGGAG | + |
Preference number: 5 (lower is better) Translates to: CGKAANAEWYARLHR*TRPTSLATTSWVWE Trigger: CTCCCACACCCAGCTGGTGGTGGCAAGGCTGGTGGGCCTAGTGCATCGATGGAGCCTGGCATACCATTCAGCATTGGCCGCTTTGCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 90 bp | CAGGCGTTCCTGAGCAATCTTCTTGCACACGAGAGGCTCCAGCAGTaGCACCTCATGGATCCGAGGGCACAGTGCCGTGCCCAGCACCTT | + |
Preference number: 5 (lower is better) Translates to: QAFLSNLLAHERLQQ*HLMDPRAQCRAQHL Trigger: AAGGTGCTGGGCACGGCACTGTGCCCTCGGATCCATGAGGTGCCACTGCTGGAGCCTCTCGTGTGCAAGAAGATTGCTCAGGAACGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 90 bp | GTGAACGCCTTGCCTGGCCGGGCCCAGGTGCAGATGAGGCCCTCTTaGCAGGCAGTGATGATACAATCCTCCAGGAACAGTAGCACGGTC | + |
Preference number: 5 (lower is better) Translates to: VNALPGRAQVQMRPS*QAVMIQSSRNSSTV Trigger: GACCGTGCTACTGTTCCTGGAGGATTGTATCATCACTGCCTGCCAAGAGGGCCTCATCTGCACCTGGGCCCGGCCAGGCAAGGCGTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS GCA 90 bp | CCTCCAGGAACAGTAGCACGGTCAGGCGTTCCTGAGCAATCTTCTTaGACACGAGAGGCTCCAGCAGTGGCACCTCATGGATCCGAGGGC | + |
Preference number: 5 (lower is better) Translates to: PPGTVARSGVPEQSS*TREAPAVAPHGSEG Trigger: GCCCTCGGATCCATGAGGTGCCACTGCTGGAGCCTCTCGTGTGCAAGAAGATTGCTCAGGAACGCCTGACCGTGCTACTGTTCCTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | TGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGACAGGGCCAAGGGGGTGTGGGAGACTGTaGGAACGAGACAGGGAGCGG | + |
Preference number: 5 (lower is better) Translates to: CFREQVIVLGSGWRTGPRGCGRL*ERDRER Trigger: CCGCTCCCTGTCTCGTTCCAACAGTCTCCCACACCC...CCTTGGCCCTGTCCTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | GAGGTCCAGGGGAACAAGGAGGGCCCTCAGGGCTTCCATAATTTAACACTTTCACTAGGCCCACCAGCCTaGCCACCACCAGCTGGGTGT | + |
Preference number: 5 (lower is better) Translates to: EVQGNKEGPQGFHNLTLSLGPPA*PPPAGC Trigger: ACACCCAGCTGGTGGTGGCAAGGCTGGTGGGCCTAG...TGAAAGTGTTAAATTATGGAAGCCCTGAGGGCCCTCCTTGTTCCCCTGGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | CACCCAGGGGTACTGTGGGCTAAGTCTCTCCCAGGAGTGAACAGTCACATGCTGCCACTGAGCTTGTCATaGCTGCTATTGCCCCCACTG | + |
Preference number: 5 (lower is better) Translates to: HPGVLWAKSLPGVNSHMLPLSLS*LLLPPL Trigger: CAGTGGGGGCAATAGCAGCAATGACAAGCTCAGTGG...CAGCATGTGACTGTTCACTCCTGGGAGAGACTTAGCCCACAGTACCCCTGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 90 bp | ATAGACAGCAAAGCCCTCACCCTGTTTCAGCAGACTATACTGGGGTaGGGTGGAGGTGCAGGGGTGACTGACGTTGTAGAGGTACAGGTG | + |
Preference number: 5 (lower is better) Translates to: IDSKALTLFQQTILG*GGGAGVTDVVEVQV Trigger: CACCTGTACCTCTACAACGTCAGTCACCCCTGCACCTCCACCCCACCCCAGTATAGTCTGCTGAAACAGGGTGAGGGCTTTGCTGTCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 90 bp | CACCCACTGCCCACTTGGCTAGTGGATTGCGGGGTGCCTTGCTTTTaGCTGCATAGACAGCAAAGCCCTCACCCTGTTTCAGCAGACTAT | + |
Preference number: 5 (lower is better) Translates to: HPLPTWLVDCGVPCF*LHRQQSPHPVSADY Trigger: ATAGTCTGCTGAAACAGGGTGAGGGCTTTGCTGTCTATGCAGCCAAAAGCAAGGCACCCCGCAATCCACTAGCCAAGTGGGCAGTGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 90 bp | CGCAGAAGCATGCTGTCAAAGTGGAAGACACGCAGGCAGCCATCCTaGCTGACACAGGCTAAGTGTCGGCCATCAGGTGAGAATGCAAAC | + |
Preference number: 5 (lower is better) Translates to: RRSMLSKWKTRRQPS*LTQAKCRPSGENAN Trigger: GTTTGCATTCTCACCTGATGGCCGACACTTAGCCTGTGTCAGCCAGGATGGCTGCCTGCGTGTCTTCCACTTTGACAGCATGCTTCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | AGGGCCAAGGCCACACAGGACACTACATCCCCATGGCTGGGCCAACCTAGGGGATTCAAATATGTCACCTaGGTCTTGTCAATCAGCCGC | + |
Preference number: 5 (lower is better) Translates to: RAKATQDTTSPWLGQPRGFKYVT*VLSISR Trigger: GCGGCTGATTGACAAGACCAAGGTGACATATTTGAA...TCCCCTAGGTTGGCCCAGCCATGGGGATGTAGTGTCCTGTGTGGCCTTGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 90 bp | GTGATGATACAATCCTCCAGGAACAGTAGCACGGTCAGGCGTTCCTaGGCAATCTTCTTGCACACGAGAGGCTCCAGCAGTGGCACCTCA | + |
Preference number: 5 (lower is better) Translates to: VMIQSSRNSSTVRRS*AIFLHTRGSSSGTS Trigger: TGAGGTGCCACTGCTGGAGCCTCTCGTGTGCAAGAAGATTGCTCAGGAACGCCTGACCGTGCTACTGTTCCTGGAGGATTGTATCATCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 90 bp | GAAGCATGCTGTCAAAGTGGAAGACACGCAGGCAGCCATCCTGGCTaGCACAGGCTAAGTGTCGGCCATCAGGTGAGAATGCAAACTCAT | + |
Preference number: 5 (lower is better) Translates to: EACCQSGRHAGSHPG*HRLSVGHQVRMQTH Trigger: ATGAGTTTGCATTCTCACCTGATGGCCGACACTTAGCCTGTGTCAGCCAGGATGGCTGCCTGCGTGTCTTCCACTTTGACAGCATGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | AGGGCCAAGGCCACACAGGACACTACATCCCCATGGCTGGGCCAACCTAGGGGATCTTCATTGAATAGCTaGCTGGTGTCTTTCTTGATG | + |
Preference number: 5 (lower is better) Translates to: RAKATQDTTSPWLGQPRGSSLNS*LVSFLM Trigger: CATCAAGAAAGACACCAGCAAGCTATTCAATGAAGA...TCCCCTAGGTTGGCCCAGCCATGGGGATGTAGTGTCCTGTGTGGCCTTGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | TGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGGGTGTGGGAGACTGTaGGAACGAGACAGGGAGCGG | + |
Preference number: 5 (lower is better) Translates to: WLTLMFQRTGHCTWQWVEGCGRL*ERDRER Trigger: CCGCTCCCTGTCTCGTTCCAACAGTCTCCCACACCC...CTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | CGTGGGGCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTAGGCCCACCAGCCTaGCCACCACCAGCTGGGTGT | + |
Preference number: 5 (lower is better) Translates to: RGAWSSPSIMISLVNTVILGPPA*PPPAGC Trigger: ACACCCAGCTGGTGGTGGCAAGGCTGGTGGGCCTAG...AATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGCCCCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | GAGGTCCAGGGGAACAAGGAGGGCCCTCAGGGCTTCCATAATTTAACACTTTCACCACTGAGCTTGTCATaGCTGCTATTGCCCCCACTG | + |
Preference number: 5 (lower is better) Translates to: EVQGNKEGPQGFHNLTLSPLSLS*LLLPPL Trigger: CAGTGGGGGCAATAGCAGCAATGACAAGCTCAGTGG...TGAAAGTGTTAAATTATGGAAGCCCTGAGGGCCCTCCTTGTTCCCCTGGACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS GCA 90 bp | TCATTGAATAGCTTGCTGGTGTCTTTCTTGATGAGGTCCAGATACTaGACCTGGCCGGCAGAGAAGCCCACCAGCAGGGAAATGGTCTCT | + |
Preference number: 5 (lower is better) Translates to: SLNSLLVSFLMRSRY*TWPAEKPTSREMVS Trigger: AGAGACCATTTCCCTGCTGGTGGGCTTCTCTGCCGGCCAGGTGCAGTATCTGGACCTCATCAAGAAAGACACCAGCAAGCTATTCAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | CATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTGTGCGAAACTGCGACTaGATCTCCGCGCAGTCGCCC | + |
Preference number: 5 (lower is better) Translates to: HAGTGIWLTLMFQRTGHCVRNCD*ISAQSP Trigger: GGGCGACTGCGCGGAGATCAAGTCGCAGTTTCGCAC...ACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | ATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCAGCGGGGAGGGTTATTCGTCTGTGAACGCCTaGCCTGGCCGGGCCCAGGTG | + |
Preference number: 5 (lower is better) Translates to: IMISLVNTVILEVSGEGYSSVNA*PGRAQV Trigger: CACCTGGGCCCGGCCAGGCAAGGCGTTCACAGACGA...ATAACCCTCCCCGCTGACCTCAAGAATCACTGTATTAACAAGACTAATCATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS TCA 90 bp | GAGGTACAGGTGGCCACTGGCGTGAGAAGCAAGGAACAGACTCTCTaGCTCAGGCAGCCACTTCAAATATGTCACCTTGGTCTTGTCAAT | + |
Preference number: 5 (lower is better) Translates to: EVQVATGVRSKEQTL*LRQPLQICHLGLVN Trigger: ATTGACAAGACCAAGGTGACATATTTGAAGTGGCTGCCTGAGTCAGAGAGTCTGTTCCTTGCTTCTCACGCCAGTGGCCACCTGTACCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | ATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCAGCGGGGAGGGTTATGGGGGAGCTGCCTGGTaGGGAGGAGATGCCCTCTAC | + |
Preference number: 5 (lower is better) Translates to: IMISLVNTVILEVSGEGYGGAAW*GGDALY Trigger: GTAGAGGGCATCTCCTCCCAACCAGGCAGCTCCCCC...ATAACCCTCCCCGCTGACCTCAAGAATCACTGTATTAACAAGACTAATCATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS-3UTR CAA 90 bp | GCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTGCGAAACTGCGACTaGATCTCCGCGCAGTCGCCC | + |
Preference number: 5 (lower is better) Translates to: AWSSPSIMISLVNTVILEVRNCD*ISAQSP Trigger: GGGCGACTGCGCGGAGATCAAGTCGCAGTTTCGCAC...CTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | TGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGGAGGAGAATGCAAACTCATaGAGGGGCCCCTCACCCACT | + |
Preference number: 5 (lower is better) Translates to: WLTLMFQRTGHCTWQWVEENANS*RGPSPT Trigger: AGTGGGTGAGGGGCCCCTCAATGAGTTTGCATTCTC...CTCCACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | ACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGGCAGATGAGGCCCTCTaGGCAGGCAGTGATGATACA | + |
Preference number: 5 (lower is better) Translates to: TVTCWDRDMVNTDVSENRADEAL*AGSDDT Trigger: TGTATCATCACTGCCTGCCAAGAGGGCCTCATCTGC...CCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | AACACTTTCAAAATCACAGACCATAGCAAGGGGTGGAGTTTGGGCAGGAGTGGGTTGCTGGTGTCTTTCTaGATGAGGTCCAGATACTGC | + |
Preference number: 5 (lower is better) Translates to: NTFKITDHSKGWSLGRSGLLVSF*MRSRYC Trigger: GCAGTATCTGGACCTCATCAAGAAAGACACCAGCAA...CCCACTCCTGCCCAAACTCCACCCCTTGCTATGGTCTGTGATTTTGAAAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | CATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTCACTTGGCTAGTGGATaGCGGGGTGCCTTGCTTTTG | + |
Preference number: 5 (lower is better) Translates to: HAGTGIWLTLMFQRTGHCHLASG*RGALLL Trigger: CAAAAGCAAGGCACCCCGCAATCCACTAGCCAAGTG...ACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | CGTGGGGCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCACTTGGCTAGTGGATaGCGGGGTGCCTTGCTTTTG | + |
Preference number: 5 (lower is better) Translates to: RGAWSSPSIMISLVNTVIHLASG*RGALLL Trigger: CAAAAGCAAGGCACCCCGCAATCCACTAGCCAAGTG...AATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGCCCCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | ATATGGTTAACACTGATGTTTCAGAGAACAGGTCATTGTACTTGGCAGTGGGTGCCCTCTACAACTGACTaGCTGGGTGACCTGGGCCAA | + |
Preference number: 5 (lower is better) Translates to: IWLTLMFQRTGHCTWQWVPSTTD*LGDLGQ Trigger: TTGGCCCAGGTCACCCAGCAAGTCAGTTGTAGAGGG...CACCCACTGCCAAGTACAATGACCTGTTCTCTGAAACATCAGTGTTAACCATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS-3UTR CAA 90 bp | ACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACAGGATCAGCCGCTCTTCATaGAATAGCTTGCTGGTGTCT | + |
Preference number: 5 (lower is better) Translates to: TVTCWDRDMVNTDVSENRISRSS*NSLLVS Trigger: AGACACCAGCAAGCTATTCAATGAAGAGCGGCTGAT...CCTGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | AGTGAACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGATTGCTGGTGTCTTTCTaGATGAGGTCCAGATACTGC | + |
Preference number: 5 (lower is better) Translates to: SEQSHAGTGIWLTLMFQRLLVSF*MRSRYC Trigger: GCAGTATCTGGACCTCATCAAGAAAGACACCAGCAA...TCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGTTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | AGTGAACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGATATGTCACCTTGGTCTaGTCAATCAGCCGCTCTTCA | + |
Preference number: 5 (lower is better) Translates to: SEQSHAGTGIWLTLMFQRYVTLV*SISRSS Trigger: TGAAGAGCGGCTGATTGACAAGACCAAGGTGACATA...TCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGTTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | GAACAGTCACATGCTGGGACAGGGATATGGTTAACACTGATGTTTCAGAGAACATTCAAATATGTCACCTaGGTCTTGTCAATCAGCCGC | + |
Preference number: 5 (lower is better) Translates to: EQSHAGTGIWLTLMFQRTFKYVT*VLSISR Trigger: GCGGCTGATTGACAAGACCAAGGTGACATATTTGAA...TGTTCTCTGAAACATCAGTGTTAACCATATCCCTGTCCCAGCATGTGACTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | TGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGGTCATCAGCCGCTCTTCATaGAATAGCTTGCTGGTGTCT | + |
Preference number: 5 (lower is better) Translates to: WSSPSIMISLVNTVILEVISRSS*NSLLVS Trigger: AGACACCAGCAAGCTATTCAATGAAGAGCGGCTGAT...GACCTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS-3UTR CAA 90 bp | GCTTGGAGCAGTCCTTCCATCATGATTAGTCTTGTTAATACAGTGATTCTTGAGTATGTCACCTTGGTCTaGTCAATCAGCCGCTCTTCA | + |
Preference number: 5 (lower is better) Translates to: AWSSPSIMISLVNTVILEYVTLV*SISRSS Trigger: TGAAGAGCGGCTGATTGACAAGACCAAGGTGACATA...CTCAAGAATCACTGTATTAACAAGACTAATCATGATGGAAGGACTGCTCCAAGC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 72 bp | AGACGCGGTCTCCTCCCGCGCCCAGTCCGGAGGGCGTaGAGGGCGGCTCCCCAGCGCCATCCGGGTCGCCTA | + |
Preference number: 6 (lower is better) Translates to: RRGLLPRPVRRA*RAAPQRHPGRL Trigger: TAGGCGACCCGGATGGCGCTGGGGAGCCGCCCTCCACGCCCTCCGGACTGGGCGCGGGAGGAGACCGCGTCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 72 bp | GCTTGTAGAAGCCCTCGCGGGTGCGAAACTGCGACTTaGTCTCCGCGCAGTCGCCCATGGCGGCGCTGGGGC | + |
Preference number: 6 (lower is better) Translates to: ACRSPRGCETAT*SPRSRPWRRWG Trigger: GCCCCAGCGCCGCCATGGGCGACTGCGCGGAGATCAAGTCGCAGTTTCGCACCCGCGAGGGCTTCTACAAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 72 bp | TCTCTCCGGCCCGAGAACTACCAGAAGCTGGTGGGGTaGCACCAGGTGTGCCCGGAAGGGTGCGGGTACGGG | + |
Preference number: 6 (lower is better) Translates to: SLRPENYQKLVG*HQVCPEGCGYG Trigger: CCCGTACCCGCACCCTTCCGGGCACACCTGGTGCCACCCCACCAGCTTCTGGTAGTTCTCGGGCCGGAGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 72 bp | CTGGGCCTCGGTCTCCTCGTCTGTGAACGCCTTGCCTaGCCGGGCCCAGGTGCAGATGAGGCCCTCTTGGCA | + |
Preference number: 6 (lower is better) Translates to: LGLGLLVCERLA*PGPGADEALLA Trigger: TGCCAAGAGGGCCTCATCTGCACCTGGGCCCGGCCAGGCAAGGCGTTCACAGACGAGGAGACCGAGGCCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS CAA 90 bp | CTAGGCCCACCAGCCTTGCCACCACCAGCTGGGTGTGGGAGACTGTaGGAACGAGACAGGGAGCGGGGCAGGGGGCCTGCACCTGTCTCT | + |
Preference number: 6 (lower is better) Translates to: LGPPALPPPAGCGRL*ERDRERGRGPAPVS Trigger: AGAGACAGGTGCAGGCCCCCTGCCCCGCTCCCTGTCTCGTTCCAACAGTCTCCCACACCCAGCTGGTGGTGGCAAGGCTGGTGGGCCTAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 72 bp | GTGCCCGGAAGGGTGCGGGTACGGGCCAGAGACGGATaGGGGGAGAGCACATCTTCTGTGAGGTCCCACAGG | + |
Preference number: 6 (lower is better) Translates to: VPGRVRVRARDG*GESTSSVRSHR Trigger: CCTGTGGGACCTCACAGAAGATGTGCTCTCCCCTCATCCGTCTCTGGCCCGTACCCGCACCCTTCCGGGCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS GCA 72 bp | GAGAACTACCAGAAGCTGGTGGGGTGGCACCAGGTGTaGCCGGAAGGGTGCGGGTACGGGCCAGAGACGGAT | + |
Preference number: 6 (lower is better) Translates to: ENYQKLVGWHQV*PEGCGYGPETD Trigger: ATCCGTCTCTGGCCCGTACCCGCACCCTTCCGGGCACACCTGGTGCCACCCCACCAGCTTCTGGTAGTTCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 72 bp | ACTAGGCCCACCAGCCTTGCCACCACCAGCTGGGTGTaGGAGACTGTTGGAACGAGACAGGGAGCGGGGCAG | + |
Preference number: 6 (lower is better) Translates to: TRPTSLATTSWV*ETVGTRQGAGQ Trigger: CTGCCCCGCTCCCTGTCTCGTTCCAACAGTCTCCCACACCCAGCTGGTGGTGGCAAGGCTGGTGGGCCTAGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CAA 90 bp | CTGGGGGAGCTGCCTGGTTGGGAGGAGATGCCCTCTACAACTGACTaGCTGGGTGACCTGGGCCAACTTGCTTGCCCTGCCTGGGCCTCG | + |
Preference number: 6 (lower is better) Translates to: LGELPGWEEMPSTTD*LGDLGQLACPAWAS Trigger: CGAGGCCCAGGCAGGGCAAGCAAGTTGGCCCAGGTCACCCAGCAAGTCAGTTGTAGAGGGCATCTCCTCCCAACCAGGCAGCTCCCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS TCA 72 bp | GGGTCCCCTTGTAGATCCGCTTGTCGATGGGCTTGTTaGGATCGATGGACCGCTGGCTCCCGCTGCGGCAGC | + |
Preference number: 6 (lower is better) Translates to: GSPCRSACRWAC*DRWTAGSRCGS Trigger: GCTGCCGCAGCGGGAGCCAGCGGTCCATCGATCTCAACAAGCCCATCGACAAGCGGATCTACAAGGGGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS GCA 72 bp | CTCCAGCAGTGGCACCTCATGGATCCGAGGGCACAGTaGCGTGCCCAGCACCTTAGCTGGGTCCAATCGGCT | + |
Preference number: 6 (lower is better) Translates to: LQQWHLMDPRAQ*RAQHLSWVQSA Trigger: AGCCGATTGGACCCAGCTAAGGTGCTGGGCACGGCACTGTGCCCTCGGATCCATGAGGTGCCACTGCTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CAA 72 bp | CCAGCTGAGCCAAAGCGGTACGTGATGGAGCCAGCCTaGGGCAGTGGGGACACTGGGGCTCCTGTGTCTGAG | + |
Preference number: 6 (lower is better) Translates to: PAEPKRYVMEPA*GSGDTGAPVSE Trigger: CTCAGACACAGGAGCCCCAGTGTCCCCACTGCCCAAGGCTGGCTCCATCACGTACCGCTTTGGCTCAGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CAA 90 bp | GTGTCCTGGCCAGCTGAGCCAAAGCGGTACGTGATGGAGCCAGCCTaGGGCAGTGGGGACACTGGGGCTCCTGTGTCTGAGCTGGTGACT | + |
Preference number: 6 (lower is better) Translates to: VSWPAEPKRYVMEPA*GSGDTGAPVSELVT Trigger: AGTCACCAGCTCAGACACAGGAGCCCCAGTGTCCCCACTGCCCAAGGCTGGCTCCATCACGTACCGCTTTGGCTCAGCTGGCCAGGACAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS GCA 72 bp | GCGGCCAATGCTGAATGGTATGCCAGGCTCCATCGATaGACTAGGCCCACCAGCCTTGCCACCACCAGCTGG | + |
Preference number: 6 (lower is better) Translates to: AANAEWYARLHR*TRPTSLATTSW Trigger: CCAGCTGGTGGTGGCAAGGCTGGTGGGCCTAGTGCATCGATGGAGCCTGGCATACCATTCAGCATTGGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 72 bp | GCAGTGGGGACACTGGGGCTCCTGTGTCTGAGCTGGTaGCTTCAGGCTCCTCCTCTTCACCACTGGGATCTC | + |
Preference number: 6 (lower is better) Translates to: AVGTLGLLCLSW*LQAPPLHHWDL Trigger: GAGATCCCAGTGGTGAAGAGGAGGAGCCTGAAGTCACCAGCTCAGACACAGGAGCCCCAGTGTCCCCACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS GCA 72 bp | TTGTGTTCCTTCTCAGCTCCCCGGTCCCGCCGCTCCTaGAGGGTCAGTGTGGCAAAGCGGCCAATGCTGAAT | + |
Preference number: 6 (lower is better) Translates to: LCSFSAPRSRRS*RVSVAKRPMLN Trigger: ATTCAGCATTGGCCGCTTTGCCACACTGACCCTGCAGGAGCGGCGGGACCGGGGAGCTGAGAAGGAACACAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 72 bp | CTGAGCAATCTTCTTGCACACGAGAGGCTCCAGCAGTaGCACCTCATGGATCCGAGGGCACAGTGCCGTGCC | + |
Preference number: 6 (lower is better) Translates to: LSNLLAHERLQQ*HLMDPRAQCRA Trigger: GGCACGGCACTGTGCCCTCGGATCCATGAGGTGCCACTGCTGGAGCCTCTCGTGTGCAAGAAGATTGCTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 72 bp | CTGGTTGGGAGGAGATGCCCTCTACAACTGACTTGCTaGGTGACCTGGGCCAACTTGCTTGCCCTGCCTGGG | + |
Preference number: 6 (lower is better) Translates to: LVGRRCPLQLTC*VTWANLLALPG Trigger: CCCAGGCAGGGCAAGCAAGTTGGCCCAGGTCACCCAGCAAGTCAGTTGTAGAGGGCATCTCCTCCCAACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS CAA 72 bp | CTGCCTGGTTGGGAGGAGATGCCCTCTACAACTGACTaGCTGGGTGACCTGGGCCAACTTGCTTGCCCTGCC | + |
Preference number: 6 (lower is better) Translates to: LPGWEEMPSTTD*LGDLGQLACPA Trigger: GGCAGGGCAAGCAAGTTGGCCCAGGTCACCCAGCAAGTCAGTTGTAGAGGGCATCTCCTCCCAACCAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS GCA 72 bp | TGCCTGGTTGGGAGGAGATGCCCTCTACAACTGACTTaGTGGGTGACCTGGGCCAACTTGCTTGCCCTGCCT | + |
Preference number: 6 (lower is better) Translates to: CLVGRRCPLQLT*WVTWANLLALP Trigger: AGGCAGGGCAAGCAAGTTGGCCCAGGTCACCCAGCAAGTCAGTTGTAGAGGGCATCTCCTCCCAACCAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032570.14 |
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CDS CCA 72 bp | ACCAGCAGGGAAATGGTCTCTGTGGCAGCTGTGAACTaGTTGAAGTCGTGGCAGGTGGGCTGGGTCCCCTTG | + |
Preference number: 6 (lower is better) Translates to: TSREMVSVAAVN*LKSWQVGWVPL Trigger: CAAGGGGACCCAGCCCACCTGCCACGACTTCAACCAGTTCACAGCTGCCACAGAGACCATTTCCCTGCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 72 bp | CTGCAGGGTCAGTGTGGCAAAGCGGCCAATGCTGAATaGTATGCCAGGCTCCATCGATGCACTAGGCCCACC | + |
Preference number: 6 (lower is better) Translates to: LQGQCGKAANAE*YARLHRCTRPT Trigger: GGTGGGCCTAGTGCATCGATGGAGCCTGGCATACCATTCAGCATTGGCCGCTTTGCCACACTGACCCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS GCA 72 bp | CCACTGCCCACTTGGCTAGTGGATTGCGGGGTGCCTTaGTTTTGGCTGCATAGACAGCAAAGCCCTCACCCT | + |
Preference number: 6 (lower is better) Translates to: PLPTWLVDCGVP*FWLHRQQSPHP Trigger: AGGGTGAGGGCTTTGCTGTCTATGCAGCCAAAAGCAAGGCACCCCGCAATCCACTAGCCAAGTGGGCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 72 bp | CTAAGTGTCGGCCATCAGGTGAGAATGCAAACTCATTaGGGGGCCCCTCACCCACTGCCCACTTGGCTAGTG | + |
Preference number: 6 (lower is better) Translates to: LSVGHQVRMQTH*GAPHPLPTWLV Trigger: CACTAGCCAAGTGGGCAGTGGGTGAGGGGCCCCTCAATGAGTTTGCATTCTCACCTGATGGCCGACACTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS GCA 72 bp | AGCTTGCTGGTGTCTTTCTTGATGAGGTCCAGATACTaGACCTGGCCGGCAGAGAAGCCCACCAGCAGGGAA | + |
Preference number: 6 (lower is better) Translates to: SLLVSFLMRSRY*TWPAEKPTSRE Trigger: TTCCCTGCTGGTGGGCTTCTCTGCCGGCCAGGTGCAGTATCTGGACCTCATCAAGAAAGACACCAGCAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS GCA 72 bp | ACAGTAGCACGGTCAGGCGTTCCTGAGCAATCTTCTTaGACACGAGAGGCTCCAGCAGTGGCACCTCATGGA | + |
Preference number: 6 (lower is better) Translates to: TVARSGVPEQSS*TREAPAVAPHG Trigger: TCCATGAGGTGCCACTGCTGGAGCCTCTCGTGTGCAAGAAGATTGCTCAGGAACGCCTGACCGTGCTACTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 72 bp | TGTCAAAGTGGAAGACACGCAGGCAGCCATCCTGGCTaGCACAGGCTAAGTGTCGGCCATCAGGTGAGAATG | + |
Preference number: 6 (lower is better) Translates to: CQSGRHAGSHPG*HRLSVGHQVRM Trigger: CATTCTCACCTGATGGCCGACACTTAGCCTGTGTCAGCCAGGATGGCTGCCTGCGTGTCTTCCACTTTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS TCA 72 bp | CAATCCTCCAGGAACAGTAGCACGGTCAGGCGTTCCTaGGCAATCTTCTTGCACACGAGAGGCTCCAGCAGT | + |
Preference number: 6 (lower is better) Translates to: QSSRNSSTVRRS*AIFLHTRGSSS Trigger: ACTGCTGGAGCCTCTCGTGTGCAAGAAGATTGCTCAGGAACGCCTGACCGTGCTACTGTTCCTGGAGGATTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CCA 72 bp | CCCACTTGGCTAGTGGATTGCGGGGTGCCTTGCTTTTaGCTGCATAGACAGCAAAGCCCTCACCCTGTTTCA | + |
Preference number: 6 (lower is better) Translates to: PTWLVDCGVPCF*LHRQQSPHPVS Trigger: TGAAACAGGGTGAGGGCTTTGCTGTCTATGCAGCCAAAAGCAAGGCACCCCGCAATCCACTAGCCAAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CAA 90 bp | TTGTCAATCAGCCGCTCTTCATTGAATAGCTTGCTGGTGTCTTTCTaGATGAGGTCCAGATACTGCACCTGGCCGGCAGAGAAGCCCACC | + |
Preference number: 6 (lower is better) Translates to: LSISRSSLNSLLVSF*MRSRYCTWPAEKPT Trigger: GGTGGGCTTCTCTGCCGGCCAGGTGCAGTATCTGGACCTCATCAAGAAAGACACCAGCAAGCTATTCAATGAAGAGCGGCTGATTGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CAA 90 bp | TATGTCACCTTGGTCTTGTCAATCAGCCGCTCTTCATTGAATAGCTaGCTGGTGTCTTTCTTGATGAGGTCCAGATACTGCACCTGGCCG | + |
Preference number: 6 (lower is better) Translates to: YVTLVLSISRSSLNS*LVSFLMRSRYCTWP Trigger: CGGCCAGGTGCAGTATCTGGACCTCATCAAGAAAGACACCAGCAAGCTATTCAATGAAGAGCGGCTGATTGACAAGACCAAGGTGACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |
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CDS CAA 72 bp | GACTCAGGCAGCCACTTCAAATATGTCACCTTGGTCTaGTCAATCAGCCGCTCTTCATTGAATAGCTTGCTG | + |
Preference number: 6 (lower is better) Translates to: DSGSHFKYVTLV*SISRSSLNSLL Trigger: CAGCAAGCTATTCAATGAAGAGCGGCTGATTGACAAGACCAAGGTGACATATTTGAAGTGGCTGCCTGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032570.14 ENSMUST00000108479.2 |