Pregenerated sensors for DMRTC1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031323Ensembl transcript IDs: ENSMUST00000033686.2, ENSMUST00000119624.8, ENSMUST00000120808.8, ENSMUST00000121197.8
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTaGAGTCCCCTCTCTCCAGCAGTACCTGGAGACAGAAAGACAAAG | + |
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Preference number: 1 (lower is better) Translates to: EPELVGLGGIEGLAS*SPLSPAVPGDRKTK Trigger: CTTTGTCTTTCTGTCTCCAGGTACTGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR CCA 90 bp | CATAGAGGGGTTGGCCAGCTGCAGTCCCCTCTCTCCAGCAGTACCTaGAGACAGAAAGACAAAGTCCAGAGCCAACAAAGTCCAGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: HRGVGQLQSPLSSST*RQKDKVQSQQSPEP Trigger: TGGCTCTGGACTTTGTTGGCTCTGGACTTTGTCTTTCTGTCTCCAGGTACTGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR CAA 90 bp | GAAGGCAGAGAACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTaGGCCAGCTGCAGTCCCCTCTCTCCAGCAGTACCTGGAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: EGREPELVGLGGIEG*ASCSPLSPAVPGDR Trigger: TCTGTCTCCAGGTACTGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTCTCTGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR-3UTR CCA 90 bp | GCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCGCTGGTAGGCCTTGGTaGCATAGAGGGGTTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ASECTQRKTLAFDTTQNPAGRPW*HRGVGQ Trigger: CTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGC...GGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR-3UTR GCA 90 bp | AACACATTAAGCACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCGAGGGGTTGGCCAGCTaGAGTCCCCTCTCTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: NTLSTLDRSHFASSETVIEGLAS*SPLSPA Trigger: TGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTC...GATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGTGCTTAATGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCTCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGGCTGGTAGGCCTTGGTaGCATAGAGGGGTTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ILMFPHACFKYSSVQICVAGRPW*HRGVGQ Trigger: CTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGC...CACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR-3UTR CCA 90 bp | TCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGAGAGCTGGTAGGCCTTaGTGGCATAGAGGGGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SCFHMHVLSTVVCRYVCERAGRP*WHRGVG Trigger: GCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCT...CTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR-3UTR GCA 90 bp | GCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCGGACAGGAGCCATTTTaGAAGTTCAGAAACAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: ASECTQRKTLAFDTTQNPGQEPF*KFRNSN Trigger: ATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCC...GGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTCTCTCCAGCAGTACCTaGAGACAGAAAGACAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: SECTQRKTLAFDTTQNPILSSST*RQKDKV Trigger: GACTTTGTCTTTCTGTCTCCAGGTACTGCTGGAGAG...AATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCAAACAGGCAGTGAAGTCAAGAGGGACATaGAATCCAGATGTCCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TLDRSHFASSETVIKQAVKSRGT*NPDVQK Trigger: CTTCTGGACATCTGGATTGCATGTCCCTCTTGACTT...CACTGCCTGTTTGATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGCTCTCCAGCAGTACCTaGAGACAGAAAGACAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: MFPHACFKYSSVQICVRVLSSST*RQKDKV Trigger: GACTTTGTCTTTCTGTCTCCAGGTACTGCTGGAGAG...CACTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTGAAAACACTGGCATTTaGTACCACTCAGAACCCCAT | + |
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Preference number: 2 (lower is better) Translates to: FPHACFKYSSVQICVRVSENTGI*YHSEPH Trigger: ATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTC...ACTCACTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| 3UTR-3UTR TCA 90 bp | TCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGGAAAACACTGGCATTTaGTACCACTCAGAACCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SCFHMHVLSTVVCRYVCEENTGI*YHSEPH Trigger: ATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTC...CTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGGACAGGAGCCATTTTaGAAGTTCAGAAACAGTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SAHKGKHWHLIPLRTPLIGQEPF*KFRNSN Trigger: ATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCC...TATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| 3UTR GCA 72 bp | CTGGTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTaGAGTCCCCTCTCTCCAGCAGTACCTGGAGACAGA | + |
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Preference number: 3 (lower is better) Translates to: LVGLGGIEGLAS*SPLSPAVPGDR Trigger: TCTGTCTCCAGGTACTGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR CCA 72 bp | ATGTCCAGAAGGCAGAGAACCAGAGCTGGTAGGCCTTaGTGGCATAGAGGGGTTGGCCAGCTGCAGTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: MSRRQRTRAGRP*WHRGVGQLQSP Trigger: AGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTCTCTGCCTTCTGGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACAACACATTAAGCACTTaGGACAGGAGCCATTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: CASECTQRKTLAFDTTQNNTLST*DRSHFA Trigger: TGCAAAATGGCTCCTGTCCAAAGTGCTTAATGTGTT...GTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| 3UTR CCA 72 bp | ATATGTGTGCGAGTGAGTGCACACAAAGGAAAACACTaGCATTTGATACCACTCAGAACCCCATTGATAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ICVRVSAHKGKH*HLIPLRTPLID Trigger: ATCTATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGCACACATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| 3UTR-3UTR CAA 90 bp | TTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTGCACACAAAGGAAAAAACACATTAAGCACTTaGGACAGGAGCCATTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FKYSSVQICVRVSAHKGKNTLST*DRSHFA Trigger: TGCAAAATGGCTCCTGTCCAAAGTGCTTAATGTGTT...TTTTCCTTTGTGTGCACTCACTCGCACACATATCTGCACACTACTGTACTTAAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| 3UTR-3UTR CAA 90 bp | ATCCTCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGAACACATTAAGCACTTaGGACAGGAGCCATTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ILMFPHACFKYSSVQICVNTLST*DRSHFA Trigger: TGCAAAATGGCTCCTGTCCAAAGTGCTTAATGTGTT...CACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| CDS-3UTR CCA 90 bp | GTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTGCAGTCCCCTCTCTCCAGCAATGGCAGAGGTCCCATaGGGCTCCCCAGGAAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: VGLGGIEGLASCSPLSPAMAEVP*GSPGRD Trigger: GTCCCTTCCTGGGGAGCCCCATGGGACCTCTGCCAT...TGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| CDS-3UTR TCA 90 bp | GTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTGCAGTCCCCTCTCTCCAGCAAGGCACTGGGGCCCATaGCCTGTGGTTGCAGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: VGLGGIEGLASCSPLSPARHWGP*PVVAVA Trigger: TGCTACTGCAACCACAGGTCATGGGCCCCAGTGCCT...TGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGAACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTGGTGGTGGCACAGGGCTaGAGAATCAGGCTTGGACAC | + |
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Preference number: 4 (lower is better) Translates to: RQRTRAGRPWWHRGVGQLVVAQG*RIRLGH Trigger: GTGTCCAAGCCTGATTCTTCAGCCCTGTGCCACCAC...CAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTCTCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| CDS-3UTR GCA 90 bp | ACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTGCAGTCCCCTTCAGGCTTGGACACATaGTTGGCATGGCAGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TRAGRPWWHRGVGQLQSPSGLDT*LAWQRS Trigger: GGACCTCTGCCATGCCAAGCATGTGTCCAAGCCTGA...AGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| CDS-3UTR CCA 90 bp | GAACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTGCAGTCCCGCTTGGACACATGCTTaGCATGGCAGAGGTCCCATG | + |
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Preference number: 4 (lower is better) Translates to: EPELVGLGGIEGLASCSPAWTHA*HGRGPM Trigger: CATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGC...GGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGAACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTGGTGTCAACCTGGGCCTaGATCTGCTGCACAGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: RQRTRAGRPWWHRGVGQLVSTWA*ICCTVF Trigger: GAACACTGTGCAGCAGATCCAGGCCCAGGTTGACAC...CAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTCTCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| CDS-3UTR GCA 90 bp | ATGTCCAGAAGGCAGAGAACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTTGCTCTCCTCCTGGGTTaGTGTGTCAACCTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: MSRRQRTRAGRPWWHRGVALLLG*CVNLGL Trigger: CAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGC...AACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTCTCTGCCTTCTGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| CDS-3UTR CCA 90 bp | GAGCTGGTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTGCAGTCCCCTCTCTCTGAAGAATCAGGCTTaGACACATGCTTGGCATGGC | + |
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Preference number: 4 (lower is better) Translates to: ELVGLGGIEGLASCSPLSLKNQA*THAWHG Trigger: GCCATGCCAAGCATGTGTCCAAGCCTGATTCTTCAG...AGAGAGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| CDS-3UTR TCA 90 bp | ATGTCCAGAAGGCAGAGAACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTTTGCATGTGTGATGGATaGGCAGCAGCCATAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: MSRRQRTRAGRPWWHRGVCMCDG*AAAIVL Trigger: AAGGACTATGGCTGCTGCTCATCCATCACACATGCA...AACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTCTCTGCCTTCTGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033686.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGAACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTGAGTCTCTGGAGTATATaGCACAGATGTTGTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RQRTRAGRPWWHRGVGQLSLWSI*HRCCFW Trigger: CCAGAAACAACATCTGTGCCATATACTCCAGAGACT...CAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTCTCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
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| CDS-3UTR CCA 90 bp | TGTGCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACATGGCAGAGGTCCCATaGGGCTCCCCAGGAAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: CASECTQRKTLAFDTTQNMAEVP*GSPGRD Trigger: GTCCCTTCCTGGGGAGCCCCATGGGACCTCTGCCAT...GTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| CDS-3UTR CCA 90 bp | GCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCAAACTGAAGCCTGGTTaGAGGCACTGGGGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: ASECTQRKTLAFDTTQNPKLKPG*RHWGPV Trigger: CACAGGGCCCCAGTGCCTCCAACCAGGCTTCAGTTT...GGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000119624.8 |
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| CDS-3UTR GCA 90 bp | GCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCTCAGGCTTGGACACATaGTTGGCATGGCAGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: ASECTQRKTLAFDTTQNPSGLDT*LAWQRS Trigger: GGACCTCTGCCATGCCAAGCATGTGTCCAAGCCTGA...GGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| CDS-3UTR GCA 90 bp | AGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGCTCTCCTCCTGGGTTaGTGTGTCAACCTGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SECTQRKTLAFDTTQNPIALLLG*CVNLGL Trigger: CAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGC...AATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| CDS-3UTR GCA 90 bp | TGTGCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCTGGGGCCCTGTGGTTaGAGTAGCATAGGGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: CASECTQRKTLAFDTTQNLGPCG*SSIGSV Trigger: CACTGACCCTATGCTACTGCAACCACAGGGCCCCAG...GTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119624.8 |
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| CDS-3UTR GCA 90 bp | TGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTGCACACAAAGGAGAGGGGTTGGCCAGCTaGAGTCCCCTCTCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CFKYSSVQICVRVSAHKGEGLAS*SPLSPA Trigger: TGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTC...TCCTTTGTGTGCACTCACTCGCACACATATCTGCACACTACTGTACTTAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
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| CDS-3UTR GCA 90 bp | AGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGAGGGGTTGGCCAGCTaGAGTCCCCTCTCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SAHKGKHWHLIPLRTPLIEGLAS*SPLSPA Trigger: TGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTC...TATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
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| CDS-3UTR TCA 90 bp | ATATGTGTGCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCGTGGTGGCACAGGGCTaGAGAATCAGGCTTGGACAC | + |
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Preference number: 4 (lower is better) Translates to: ICVRVSAHKGKHWHLIPLVVAQG*RIRLGH Trigger: GTGTCCAAGCCTGATTCTTCAGCCCTGTGCCACCAC...GAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGCACACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| CDS-3UTR GCA 90 bp | ACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCAAACAGGCAGTGCAGCAGTACCTGGCATaGCACAGGGCTGGTGACGTG | + |
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Preference number: 4 (lower is better) Translates to: TLDRSHFASSETVIKQAVQQYLA*HRAGDV Trigger: CACGTCACCAGCCCTGTGGCATGCCAGGTACTGCTG...CACTGCCTGTTTGATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
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| CDS-3UTR CCA 90 bp | TGTGCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACGTGTCAACCTGGGCCTaGATCTGCTGCACAGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: CASECTQRKTLAFDTTQNVSTWA*ICCTVF Trigger: GAACACTGTGCAGCAGATCCAGGCCCAGGTTGACAC...GTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| CDS-3UTR CCA 90 bp | TGTGCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACGTTGTTTCTGGGTGCTaGTTCAGCAGCACAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: CASECTQRKTLAFDTTQNVVSGC*FSSTGP Trigger: AGGGCCTGTGCTGCTGAACCAGCACCCAGAAACAAC...GTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
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| CDS-3UTR CCA 90 bp | AGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATACCTGGTTGGAGGCACTaGGGCCCTGTGGTTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SAHKGKHWHLIPLRTPLIPGWRH*GPVVAV Trigger: TACTGCAACCACAGGGCCCCAGTGCCTCCAACCAGG...TATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119624.8 |
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| CDS-3UTR CCA 90 bp | ACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCAAACAGGCAGTGCTCTCCAGCAGTACCTaGCATGCCACAGGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLDRSHFASSETVIKQAVLSSST*HATGLV Trigger: CACCAGCCCTGTGGCATGCCAGGTACTGCTGGAGAG...CACTGCCTGTTTGATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | TGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGAGCTGGTAGGCCTTGGTaGCATAGAGGGGTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTQRKTLAFDTTQNPIDRAGRPW*HRGVGQ Trigger: CTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGC...TCTATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS-3UTR TCA 90 bp | TCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGAGGCACTGGGGCCCATaGCCTGTGGTTGCAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCFHMHVLSTVVCRYVCERHWGP*PVVAVA Trigger: TGCTACTGCAACCACAGGTCATGGGCCCCAGTGCCT...CTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTGCTCTCCTCCTGGGTTaGTGTGTCAACCTGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPHACFKYSSVQICVRVSALLLG*CVNLGL Trigger: CAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGC...ACTCACTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR GCA 90 bp | TCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGCAGCAGTACCTGGCATaGCACAGGGCTGGTGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCFHMHVLSTVVCRYVCEQQYLA*HRAGDV Trigger: CACGTCACCAGCCCTGTGGCATGCCAGGTACTGCTG...CTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | ATATGTGTGCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCGTTGTTTCTGGGTGCTaGTTCAGCAGCACAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ICVRVSAHKGKHWHLIPLVVSGC*FSSTGP Trigger: AGGGCCTGTGCTGCTGAACCAGCACCCAGAAACAAC...GAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGCACACATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | AACACATTAAGCACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCATGGCAGAGGTCCCATaGGGCTCCCCAGGAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NTLSTLDRSHFASSETVIMAEVP*GSPGRD Trigger: GTCCCTTCCTGGGGAGCCCCATGGGACCTCTGCCAT...GATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGTGCTTAATGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGATGGCAGAGGTCCCATaGGGCTCCCCAGGAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILMFPHACFKYSSVQICVMAEVP*GSPGRD Trigger: GTCCCTTCCTGGGGAGCCCCATGGGACCTCTGCCAT...CACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGCTTGGACACATGCTTaGCATGGCAGAGGTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SECTQRKTLAFDTTQNPIAWTHA*HGRGPM Trigger: CATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGC...AATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAAGAGCTGGTAGGCCTTaGTGGCATAGAGGGGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAHKGKHWHLIPLRTPLIRAGRP*WHRGVG Trigger: GCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCT...TATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS-3UTR TCA 90 bp | TCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGGTGGTGGCACAGGGCTaGAGAATCAGGCTTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: SCFHMHVLSTVVCRYVCEVVAQG*RIRLGH Trigger: GTGTCCAAGCCTGATTCTTCAGCCCTGTGCCACCAC...CTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR TCA 90 bp | AACACATTAAGCACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCAGGCACTGGGGCCCATaGCCTGTGGTTGCAGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NTLSTLDRSHFASSETVIRHWGP*PVVAVA Trigger: TGCTACTGCAACCACAGGTCATGGGCCCCAGTGCCT...GATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGTGCTTAATGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR GCA 90 bp | AGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATGTTGTTTCTGGGTaGTGGTTCAGCAGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SECTQRKTLAFDTTQNPIDVVSG*WFSSTG Trigger: GCCTGTGCTGCTGAACCAGCACCCAGAAACAACATC...AATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCAAACAGGCAGTGTCAGGCTTGGACACATaGTTGGCATGGCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLDRSHFASSETVIKQAVSGLDT*LAWQRS Trigger: GGACCTCTGCCATGCCAAGCATGTGTCCAAGCCTGA...CACTGCCTGTTTGATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCAAACAGGCAGTGCTTCAGGCTTGGACACATaGTTGGCATGGCAGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FGQEPFCKFRNSNQTGSASGLDT*LAWQRS Trigger: GGACCTCTGCCATGCCAAGCATGTGTCCAAGCCTGA...AGCACTGCCTGTTTGATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | TGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGAGTGTCAACCTGGGCCTaGATCTGCTGCACAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CTQRKTLAFDTTQNPIDRVSTWA*ICCTVF Trigger: GAACACTGTGCAGCAGATCCAGGCCCAGGTTGACAC...TCTATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCAAACAGGCAGTGCTGTGTCAACCTGGGCCTaGATCTGCTGCACAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FGQEPFCKFRNSNQTGSAVSTWA*ICCTVF Trigger: GAACACTGTGCAGCAGATCCAGGCCCAGGTTGACAC...AGCACTGCCTGTTTGATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGATTGTTTAGCAGCACAGGCCCTTaGGAGCTCTCCTCCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QRKTLAFDTTQNPIDRLFSSTGP*ELSSWV Trigger: AACCCAGGAGGAGAGCTCCCAAGGGCCTGTGCTGCT...AAACAATCTATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGTTGTTTCTGGGTGCTaGTTCAGCAGCACAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAHKGKHWHLIPLRTPLIVVSGC*FSSTGP Trigger: AGGGCCTGTGCTGCTGAACCAGCACCCAGAAACAAC...TATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTGCACACAAAGGAGTTGTTTCTGGGTGCTaGTTCAGCAGCACAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFKYSSVQICVRVSAHKGVVSGC*FSSTGP Trigger: AGGGCCTGTGCTGCTGAACCAGCACCCAGAAACAAC...TCCTTTGTGTGCACTCACTCGCACACATATCTGCACACTACTGTACTTAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | AACACATTAAGCACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCCTCTCCAGCAGTACCTaGCATGCCACAGGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTLSTLDRSHFASSETVILSSST*HATGLV Trigger: CACCAGCCCTGTGGCATGCCAGGTACTGCTGGAGAG...GATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGTGCTTAATGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | AGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTCACAGATGTTGTTTCTaGGTGCTGGTTCAGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SECTQRKTLAFDTTQNPIHRCCF*VLVQQH Trigger: GTGCTGCTGAACCAGCACCCAGAAACAACATCTGTG...AATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGGCTTGGACACATGCTTaGCATGGCAGAGGTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: MFPHACFKYSSVQICVRVAWTHA*HGRGPM Trigger: CATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGC...CACTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGAGAGCTGGTAGGCCTTaGTGGCATAGAGGGGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILMFPHACFKYSSVQICVRAGRP*WHRGVG Trigger: GCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCT...CACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGATTGTTTGCTTGGACACATGCTTaGCATGGCAGAGGTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QRKTLAFDTTQNPIDRLFAWTHA*HGRGPM Trigger: CATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGC...AAACAATCTATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR GCA 90 bp | AACACATTAAGCACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCGATGTTGTTTCTGGGTaGTGGTTCAGCAGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTLSTLDRSHFASSETVIDVVSG*WFSSTG Trigger: GCCTGTGCTGCTGAACCAGCACCCAGAAACAACATC...GATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGTGCTTAATGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTCACAGATGTTGTTTCTaGGTGCTGGTTCAGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPHACFKYSSVQICVRVSHRCCF*VLVQQH Trigger: GTGCTGCTGAACCAGCACCCAGAAACAACATCTGTG...ACTCACTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | TCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGCACAGATGTTGTTTCTaGGTGCTGGTTCAGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCFHMHVLSTVVCRYVCEHRCCF*VLVQQH Trigger: GTGCTGCTGAACCAGCACCCAGAAACAACATCTGTG...CTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTCTGAAGAATCAGGCTTaGACACATGCTTGGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPHACFKYSSVQICVRVSLKNQA*THAWHG Trigger: GCCATGCCAAGCATGTGTCCAAGCCTGATTCTTCAG...ACTCACTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTGCACACAAAGGAAAACTGAAGAATCAGGCTTaGACACATGCTTGGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FKYSSVQICVRVSAHKGKLKNQA*THAWHG Trigger: GCCATGCCAAGCATGTGTCCAAGCCTGATTCTTCAG...TTTTCCTTTGTGTGCACTCACTCGCACACATATCTGCACACTACTGTACTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGTGCATGTGTGATGGATaGGCAGCAGCCATAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILMFPHACFKYSSVQICVCMCDG*AAAIVL Trigger: AAGGACTATGGCTGCTGCTCATCCATCACACATGCA...CACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAAAGTCAAGAGGGACATaGAATCCAGATGTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAHKGKHWHLIPLRTPLIKSRGT*NPDVQK Trigger: CTTCTGGACATCTGGATTGCATGTCCCTCTTGACTT...TATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGATTGTTTCACAGATGTTGTTTCTaGGTGCTGGTTCAGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRKTLAFDTTQNPIDRLFHRCCF*VLVQQH Trigger: GTGCTGCTGAACCAGCACCCAGAAACAACATCTGTG...AAACAATCTATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGATTGTTTCTGAAGAATCAGGCTTaGACACATGCTTGGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRKTLAFDTTQNPIDRLFLKNQA*THAWHG Trigger: GCCATGCCAAGCATGTGTCCAAGCCTGATTCTTCAG...AAACAATCTATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTGCACACAAAGGAAAAAAGTCAAGAGGGACATaGAATCCAGATGTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FKYSSVQICVRVSAHKGKKSRGT*NPDVQK Trigger: CTTCTGGACATCTGGATTGCATGTCCCTCTTGACTT...TTTTCCTTTGTGTGCACTCACTCGCACACATATCTGCACACTACTGTACTTAAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAAGTCTCTGGAGTATATaGCACAGATGTTGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAHKGKHWHLIPLRTPLISLWSI*HRCCFW Trigger: CCAGAAACAACATCTGTGCCATATACTCCAGAGACT...TATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | TGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGAAGTCTCTGGAGTATATaGCACAGATGTTGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTQRKTLAFDTTQNPIDRSLWSI*HRCCFW Trigger: CCAGAAACAACATCTGTGCCATATACTCCAGAGACT...TCTATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTGCACACAAAGGAAAAAGTCTCTGGAGTATATaGCACAGATGTTGTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKYSSVQICVRVSAHKGKSLWSI*HRCCFW Trigger: CCAGAAACAACATCTGTGCCATATACTCCAGAGACT...TTTTCCTTTGTGTGCACTCACTCGCACACATATCTGCACACTACTGTACTTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | GTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTGCAGTCCCCTCTCTCCAGCACAGCAGCACAGGCCCTaGGGAGCTCTCCTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VGLGGIEGLASCSPLSPAQQHRP*GALLLG Trigger: ACCCAGGAGGAGAGCTCCCAAGGGCCTGTGCTGCTG...TGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
||
| CDS GCA 90 bp | GAACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTaGAGTCCCCTCTCTCCAGCAGTACCTGGCATGCCACAGGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EPELVGLGGIEGLAS*SPLSPAVPGMPQGW Trigger: CCAGCCCTGTGGCATGCCAGGTACTGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS CCA 90 bp | GGCACAGATGTTGTTTCTGGGTGCTGGTTCAGCAGCACAGGCCCTTaGGAGCTCTCCTCCTGGGTTGCTGTGTCAACCTGGGCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GTDVVSGCWFSSTGP*ELSSWVAVSTWAWI Trigger: GATCCAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGCTCCCAAGGGCCTGTGCTGCTGAACCAGCACCCAGAAACAACATCTGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CCA 90 bp | GTCAGTGGTGGCACAGGGCTGAAGAATCAGGCTTGGACACATGCTTaGCATGGCAGAGGTCCCATGGGGCTCCCCAGGAAGGGACACCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSGGTGLKNQAWTHA*HGRGPMGLPRKGHH Trigger: ATGGTGTCCCTTCCTGGGGAGCCCCATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGCCTGATTCTTCAGCCCTGTGCCACCACTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CCA 90 bp | GGCCCTTGGGAGCTCTCCTCCTGGGTTGCTGTGTCAACCTGGGCCTaGATCTGCTGCACAGTGTTCTTTCCAGTGCGAACTCCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPWELSSWVAVSTWA*ICCTVFFPVRTPSS Trigger: AGAAGAAGGAGTTCGCACTGGAAAGAACACTGTGCAGCAGATCCAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGCTCCCAAGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 |
||
| CDS GCA 90 bp | TGGGAGCTCTCCTCCTGGGTTGCTGTGTCAACCTGGGCCTGGATCTaGTGCACAGTGTTCTTTCCAGTGCGAACTCCTTCTTCTACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WELSSWVAVSTWAWI*CTVFFPVRTPSSTA Trigger: GGCTGTAGAAGAAGGAGTTCGCACTGGAAAGAACACTGTGCAGCAGATCCAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 |
||
| CDS CCA 90 bp | GGGCTCCCCAGGAAGGGACACCATCAGTTGTTGCCCCACAGTCTCTaGAGTATATGGCACAGATGTTGTTTCTGGGTGCTGGTTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLPRKGHHQLLPHSL*SIWHRCCFWVLVQQ Trigger: CTGCTGAACCAGCACCCAGAAACAACATCTGTGCCATATACTCCAGAGACTGTGGGGCAACAACTGATGGTGTCCCTTCCTGGGGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CCA 90 bp | GGCCCTTGGGAGCTCTCCTCCTGGGTTGCTGTGTCAACCTGGGCCTaGATCTGCTGCACAGTGTTCTTTCCAGCTGTAAAAGAAGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPWELSSWVAVSTWA*ICCTVFFPAVKEES Trigger: TGACTCTTCTTTTACAGCTGGAAAGAACACTGTGCAGCAGATCCAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGCTCCCAAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CCA 90 bp | AGGAAGGGACACCATCAGTTGTTGCCCCACAGTCTCTGGAGTATATaGCACAGATGTTGTTTCTGGGTGCTGGTTCAGCAGCACAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RKGHHQLLPHSLWSI*HRCCFWVLVQQHRP Trigger: GGGCCTGTGCTGCTGAACCAGCACCCAGAAACAACATCTGTGCCATATACTCCAGAGACTGTGGGGCAACAACTGATGGTGTCCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | GCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCGAAACTGAAGCCTGGTaGGAGGCACTGGGGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ASECTQRKTLAFDTTQNPETEAW*EALGPM Trigger: CATGGGCCCCAGTGCCTCCAACCAGGCTTCAGTTTC...GGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGCAGCAGCACAGGCCCTaGGGAGCTCTCCTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: MFPHACFKYSSVQICVRVQQHRP*GALLLG Trigger: ACCCAGGAGGAGAGCTCCCAAGGGCCTGTGCTGCTG...CACTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS GCA 90 bp | TGGGAGCTCTCCTCCTGGGTTGCTGTGTCAACCTGGGCCTGGATCTaGTGCACAGTGTTCTTTCCAGCTGTAAAAGAAGAGTCATATTTT | + |
|
Preference number: 5 (lower is better) Translates to: WELSSWVAVSTWAWI*CTVFFPAVKEESYF Trigger: AAAATATGACTCTTCTTTTACAGCTGGAAAGAACACTGTGCAGCAGATCCAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | AACACATTAAGCACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCCAGCAGCACAGGCCCTaGGGAGCTCTCCTCCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: NTLSTLDRSHFASSETVIQQHRP*GALLLG Trigger: ACCCAGGAGGAGAGCTCCCAAGGGCCTGTGCTGCTG...GATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGTGCTTAATGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | TGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGAGAAACTGAAGCCTGGTaGGAGGCACTGGGGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CTQRKTLAFDTTQNPIDRETEAW*EALGPM Trigger: CATGGGCCCCAGTGCCTCCAACCAGGCTTCAGTTTC...TCTATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCAAACAGGCAGTGCTGAAACTGAAGCCTGGTaGGAGGCACTGGGGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FGQEPFCKFRNSNQTGSAETEAW*EALGPC Trigger: ACAGGGCCCCAGTGCCTCCAACCAGGCTTCAGTTTC...AGCACTGCCTGTTTGATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119624.8 |
||
| CDS-3UTR CAA 90 bp | TGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGAGGCTTGGACACATGCTaGGCATGGCAGAGGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: CTQRKTLAFDTTQNPIDRGLDTC*AWQRSH Trigger: ATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGCC...TCTATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCATTGATAGGCTTGGACACATGCTaGGCATGGCAGAGGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SAHKGKHWHLIPLRTPLIGLDTC*AWQRSH Trigger: ATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGCC...TATCAATGGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGGAAACTGAAGCCTGGTaGGAGGCACTGGGGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: MFPHACFKYSSVQICVRVETEAW*EALGPM Trigger: CATGGGCCCCAGTGCCTCCAACCAGGCTTCAGTTTC...CACTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCAAACAGGCAGTGCTGTAGCCTCCTCCTTCTaGGAGGTGGTCACAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FGQEPFCKFRNSNQTGSAVASSF*EVVTGE Trigger: TTCTCCTGTGACCACCTCCAAGAAGGAGGAGGCTAC...AGCACTGCCTGTTTGATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 |
||
| CDS-3UTR CAA 90 bp | GCGAGTGAGTGCACACAAAGGAAAACACTGGCATTTGATACCACTCAGAACCCCTATATGGCACAGATGTaGTTTCTGGGTGCTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASECTQRKTLAFDTTQNPYMAQM*FLGAGS Trigger: TGAACCAGCACCCAGAAACAACATCTGTGCCATATA...GGGGTTCTGAGTGGTATCAAATGCCAGTGTTTTCCTTTGTGTGCACTCACTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGAGTGGCTTGGACACATGCTaGGCATGGCAGAGGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FPHACFKYSSVQICVRVSGLDTC*AWQRSH Trigger: ATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGCC...ACTCACTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | TCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGGTAGCCTCCTCCTTCTaGGAGGTGGTCACAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SCFHMHVLSTVVCRYVCEVASSF*EVVTGE Trigger: TTCTCCTGTGACCACCTCCAAGAAGGAGGAGGCTAC...CTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTGTATATGGCACAGATGTaGTTTCTGGGTGCTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: MFPHACFKYSSVQICVRVYMAQM*FLGAGS Trigger: TGAACCAGCACCCAGAAACAACATCTGTGCCATATA...CACTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | TCATGTTTCCACATGCATGTTTTAAGTACAGTAGTGTGCAGATATGTGTGCGAGTATATGGCACAGATGTaGTTTCTGGGTGCTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SCFHMHVLSTVVCRYVCEYMAQM*FLGAGS Trigger: TGAACCAGCACCCAGAAACAACATCTGTGCCATATA...CTCGCACACATATCTGCACACTACTGTACTTAAAACATGCATGTGGAAACATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS-3UTR CAA 90 bp | AACACATTAAGCACTTTGGACAGGAGCCATTTTGCAAGTTCAGAAACAGTAATCTATATGGCACAGATGTaGTTTCTGGGTGCTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTLSTLDRSHFASSETVIYMAQM*FLGAGS Trigger: TGAACCAGCACCCAGAAACAACATCTGTGCCATATA...GATTACTGTTTCTGAACTTGCAAAATGGCTCCTGTCCAAAGTGCTTAATGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS GCA 72 bp | CTGGTAGGCCTTGGTGGCATAGAGGGGTTGGCCAGCTaGAGTCCCCTCTCTCCAGCAGTACCTGGCATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LVGLGGIEGLAS*SPLSPAVPGMP Trigger: TGGCATGCCAGGTACTGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS CAA 90 bp | GAAGGCAGAGAACCAGAGCTGGTAGGCCTTGGTGGCATAGAGGGGTaGGCCAGCTGCAGTCCCCTCTCTCCAGCAGTACCTGGCATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGREPELVGLGGIEG*ASCSPLSPAVPGMP Trigger: TGGCATGCCAGGTACTGCTGGAGAGAGGGGACTGCAGCTGGCCAACCCCTCTATGCCACCAAGGCCTACCAGCTCTGGTTCTCTGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119624.8 ENSMUST00000121197.8 |
||
| CDS GCA 72 bp | TGGTGGCACAGGGCTGAAGAATCAGGCTTGGACACATaGTTGGCATGGCAGAGGTCCCATGGGGCTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WWHRAEESGLDT*LAWQRSHGAPQ Trigger: CTGGGGAGCCCCATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGCCTGATTCTTCAGCCCTGTGCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CCA 72 bp | GTTGTTTCTGGGTGCTGGTTCAGCAGCACAGGCCCTTaGGAGCTCTCCTCCTGGGTTGCTGTGTCAACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VVSGCWFSSTGP*ELSSWVAVSTW Trigger: CCAGGTTGACACAGCAACCCAGGAGGAGAGCTCCCAAGGGCCTGTGCTGCTGAACCAGCACCCAGAAACAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CCA 72 bp | AGGGCTGAAGAATCAGGCTTGGACACATGCTTGGCATaGCAGAGGTCCCATGGGGCTCCCCAGGAAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: RAEESGLDTCLA*QRSHGAPQEGT Trigger: TGTCCCTTCCTGGGGAGCCCCATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGCCTGATTCTTCAGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CAA 72 bp | TGGCACAGGGCTGAAGAATCAGGCTTGGACACATGCTaGGCATGGCAGAGGTCCCATGGGGCTCCCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WHRAEESGLDTC*AWQRSHGAPQE Trigger: TTCCTGGGGAGCCCCATGGGACCTCTGCCATGCCAAGCATGTGTCCAAGCCTGATTCTTCAGCCCTGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CCA 72 bp | CCTTGGGAGCTCTCCTCCTGGGTTGCTGTGTCAACCTaGGCCTGGATCTGCTGCACAGTGTTCTTTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PWELSSWVAVST*AWICCTVFFPV Trigger: CACTGGAAAGAACACTGTGCAGCAGATCCAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGCTCCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 |
||
| CDS CCA 72 bp | CCTTGGGAGCTCTCCTCCTGGGTTGCTGTGTCAACCTaGGCCTGGATCTGCTGCACAGTGTTCTTTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PWELSSWVAVST*AWICCTVFFPA Trigger: AGCTGGAAAGAACACTGTGCAGCAGATCCAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGCTCCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CAA 90 bp | TCCAGCATCTCCTGCCACTCTAAGGTAGCAGAAACTGAAGCCTGGTaGGAGGCACTGGGGCCCATGACCTGTGGTTGCAGTAGCATAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSISCHSKVAETEAW*EALGPMTCGCSSIG Trigger: CCCTATGCTACTGCAACCACAGGTCATGGGCCCCAGTGCCTCCAACCAGGCTTCAGTTTCTGCTACCTTAGAGTGGCAGGAGATGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CAA 90 bp | TCCAGCATCTCCTGCCACTCTAAGGTAGCAGAAACTGAAGCCTGGTaGGAGGCACTGGGGCCCTGTGGTTGCAGTAGCATAGGGTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSISCHSKVAETEAW*EALGPCGCSSIGSV Trigger: CACTGACCCTATGCTACTGCAACCACAGGGCCCCAGTGCCTCCAACCAGGCTTCAGTTTCTGCTACCTTAGAGTGGCAGGAGATGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119624.8 |
||
| CDS CCA 72 bp | GAGCTCTCCTCCTGGGTTGCTGTGTCAACCTGGGCCTaGATCTGCTGCACAGTGTTCTTTCCAGTGCGAACT | + |
|
Preference number: 6 (lower is better) Translates to: ELSSWVAVSTWA*ICCTVFFPVRT Trigger: AGTTCGCACTGGAAAGAACACTGTGCAGCAGATCCAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 |
||
| CDS CAA 72 bp | TCCTGCCACTCTAAGGTAGCAGAAACTGAAGCCTGGTaGGAGGCACTGGGGCCCATGACCTGTGGTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SCHSKVAETEAW*EALGPMTCGCS Trigger: ACTGCAACCACAGGTCATGGGCCCCAGTGCCTCCAACCAGGCTTCAGTTTCTGCTACCTTAGAGTGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS GCA 72 bp | AGAGCCAGCAGAGCTTCAGCAGCCTCCAGCATCTCCTaGCACTCTAAGGTAGCAGAAACTGAAGCCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RASRASAASSIS*HSKVAETEAWL Trigger: CAACCAGGCTTCAGTTTCTGCTACCTTAGAGTGGCAGGAGATGCTGGAGGCTGCTGAAGCTCTGCTGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CAA 72 bp | TCCTGCCACTCTAAGGTAGCAGAAACTGAAGCCTGGTaGGAGGCACTGGGGCCCTGTGGTTGCAGTAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: SCHSKVAETEAW*EALGPCGCSSI Trigger: TATGCTACTGCAACCACAGGGCCCCAGTGCCTCCAACCAGGCTTCAGTTTCTGCTACCTTAGAGTGGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119624.8 |
||
| CDS CCA 72 bp | GAGCTCTCCTCCTGGGTTGCTGTGTCAACCTGGGCCTaGATCTGCTGCACAGTGTTCTTTCCAGCTGTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: ELSSWVAVSTWA*ICCTVFFPAVK Trigger: TTTTACAGCTGGAAAGAACACTGTGCAGCAGATCCAGGCCCAGGTTGACACAGCAACCCAGGAGGAGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CAA 72 bp | GTTGCCCCACAGTCTCTGGAGTATATGGCACAGATGTaGTTTCTGGGTGCTGGTTCAGCAGCACAGGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VAPQSLEYMAQM*FLGAGSAAQAL Trigger: AAGGGCCTGTGCTGCTGAACCAGCACCCAGAAACAACATCTGTGCCATATACTCCAGAGACTGTGGGGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CAA 90 bp | TGTCTCTCAACCAGGCGTCTCTTTAATGGGGTAGCCTCCTCCTTCTaGGAGGTGGTCACAGGAGAAAAGTCCTTACGAGGTTCCCGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CLSTRRLFNGVASSF*EVVTGEKSLRGSRE Trigger: TTCCCGGGAACCTCGTAAGGACTTTTCTCCTGTGACCACCTCCAAGAAGGAGGAGGCTACCCCATTAAAGAGACGCCTGGTTGAGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 |
||
| CDS GCA 72 bp | TACGTGATGCTCCGCTTAGCTCTCTCTTCACTGGCATaGCACAGGGCTGGTGACGTGTCTGAGACGAATTTT | + |
|
Preference number: 6 (lower is better) Translates to: YVMLRLALSSLA*HRAGDVSETNF Trigger: AAAATTCGTCTCAGACACGTCACCAGCCCTGTGGCATGCCAGTGAAGAGAGAGCTAAGCGGAGCATCACGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000120808.8 |
||
| CDS CCA 72 bp | CACCATCAGTTGTTGCCCCACAGTCTCTGGAGTATATaGCACAGATGTTGTTTCTGGGTGCTGGTTCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HHQLLPHSLWSI*HRCCFWVLVQQ Trigger: CTGCTGAACCAGCACCCAGAAACAACATCTGTGCCATATACTCCAGAGACTGTGGGGCAACAACTGATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS CCA 72 bp | AGGAAGGGACACCATCAGTTGTTGCCCCACAGTCTCTaGAGTATATGGCACAGATGTTGTTTCTGGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RKGHHQLLPHSL*SIWHRCCFWVL Trigger: CAGCACCCAGAAACAACATCTGTGCCATATACTCCAGAGACTGTGGGGCAACAACTGATGGTGTCCCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 ENSMUST00000120808.8 ENSMUST00000121197.8 |
||
| CDS TCA 72 bp | TCTACAGCCAATTTCTTGACGTGCATGTGTGATGGATaGGCAGCAGCCATAGTCCTTTTATGTCTCTCAACC | + |
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Preference number: 6 (lower is better) Translates to: STANFLTCMCDG*AAAIVLLCLST Trigger: GGTTGAGAGACATAAAAGGACTATGGCTGCTGCTCATCCATCACACATGCACGTCAAGAAATTGGCTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033686.2 ENSMUST00000119624.8 |
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