Pregenerated sensors for DMRTB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028610Ensembl transcript IDs: ENSMUST00000069271.5, ENSMUST00000131776.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCTGCTGTCAGCATCTCAGGCCCTGGCACCTGCCCTGCACTGTCTaGAGGCCTTGGTGTTTGCGGTACCCAGGCTTGGGGGTCAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: TCCQHLRPWHLPCTV*RPWCLRYPGLGVRQ Trigger: TTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCCAGGGCCTGAGATGCTGACAGCAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR GCA 90 bp | GTGGATGCTGCAGAACCTGCTGTCAGCATCTCAGGCCCTGGCACCTaGCCTGCACTGTCTGGAGGCCTTGGTGTTTGCGGTACCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: VDAAEPAVSISGPGT*PALSGGLGVCGTQA Trigger: AGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCCAGGGCCTGAGATGCTGACAGCAGGTTCTGCAGCATCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR GCA 90 bp | TCACTCTCTGGAAGAGGACGAGAGGCAGTGTTGGGCAAAGGTGGATaGTGCAGAACCTGCTGTCAGCATCTCAGGCCCTGGCACCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: SLSGRGREAVLGKGG*CRTCCQHLRPWHLP Trigger: GGGCAGGTGCCAGGGCCTGAGATGCTGACAGCAGGTTCTGCAGCATCCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CCA 90 bp | AGTTGTCAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTTaGGCAAAGGTGGATGCTGCAGAACCTGCTGTCAGCATCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: SCQDAHSLEEDERQC*AKVDAAEPAVSISG Trigger: GCCTGAGATGCTGACAGCAGGTTCTGCAGCATCCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTGACAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CCA 90 bp | CCCAGGACCCAGAGAACCTTGGAAACCACCTGTGCCCTTCTAACCTaGAGTAGGAATTCGCTGCCTTCTTACACCTATCAGTATCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: PRTQRTLETTCALLT*SRNSLPSYTYQYPF Trigger: GAAAGGATACTGATAGGTGTAAGAAGGCAGCGAATTCCTACTCCAGGTTAGAAGGGCACAGGTGGTTTCCAAGGTTCTCTGGGTCCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CCA 90 bp | GGCTTGGGGAAATCAGGGGCCACCTCTAGAAGTGAATTTCATACATaGCTCAGATGGTTAAATTCATTTCTAAACTTGTGTTTCACCAGC | + |
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Preference number: 1 (lower is better) Translates to: GLGKSGATSRSEFHT*LRWLNSFLNLCFTS Trigger: GCTGGTGAAACACAAGTTTAGAAATGAATTTAACCATCTGAGCCATGTATGAAATTCACTTCTAGAGGTGGCCCCTGATTTCCCCAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CAA 90 bp | TCAGCATCTCAGGCCCTGGCACCTGCCCTGCACTGTCTGGAGGCCTaGGTGTTTGCGGTACCCAGGCTTGGGGGTCAGGCAAAGGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SASQALAPALHCLEA*VFAVPRLGGQAKGA Trigger: TGCCCCCTTTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCCAGGGCCTGAGATGCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CAA 90 bp | CTGCCCTGCACTGTCTGGAGGCCTTGGTGTTTGCGGTACCCAGGCTaGGGGGTCAGGCAAAGGGGGCAGAAGGCTGAACTGAATGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: LPCTVWRPWCLRYPG*GVRQRGQKAELNGA Trigger: GGCACCATTCAGTTCAGCCTTCTGCCCCCTTTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCCTTGGTGTTTGCGGTACCCAGGCTTGGGGGTCAGGCAAAGGGGGCAGAGCCTTCTGTCCTGAGTaGGGCTTGGGGAAATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GGLGVCGTQAWGSGKGGRAFCPE*GLGKSG Trigger: CCCTGATTTCCCCAAGCCTCACTCAGGACAGAAGGC...TCTGCCCCCTTTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCCTTGGTGTTTGCGGTACCCAGGCTTGGGGGTCAGGCAAAGGGGGCAGAGTCCTGAGTGAGGCTTaGGGAAATCAGGGGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: GGLGVCGTQAWGSGKGGRVLSEA*GNQGPP Trigger: AGGTGGCCCCTGATTTCCCCAAGCCTCACTCAGGAC...TCTGCCCCCTTTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCACCTGCCCTGCACTGTCTGGAGGCCTTGGTGTTTGCGGTACCCAGGCTTAAGGGGGCAGAAGGCTaGACTGAATGGTGCCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: LAPALHCLEALVFAVPRLKGAEG*TEWCLL Trigger: CAGAAGGCACCATTCAGTTCAGCCTTCTGCCCCCTT...AAGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CAA 90 bp | CAGTTGTCAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTaGGGCAAAGGTGGATGCTGCAGAACCTGCTGTCAGCATCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: QLSGRSLSGRGREAV*GKGGCCRTCCQHLR Trigger: CCTGAGATGCTGACAGCAGGTTCTGCAGCATCCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTGACAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTTGGGCAAAGGTGGATGGTGCCTTCTGTCCTaGGTGAGGCTTGGGGAAATC | + |
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Preference number: 2 (lower is better) Translates to: SGRSLSGRGREAVLGKGGWCLLS*VRLGEI Trigger: GATTTCCCCAAGCCTCACTCAGGACAGAAGGCACCA...TCCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CAA 90 bp | CCCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTaGTACACCACTTCAACACCCACCCAGGACCCAGAGAACCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: PPLFKSPAHPRLSLP*YTTSTPTQDPENLG Trigger: TCCAAGGTTCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTTGTACACCAGGACCCAGAGAACCTTaGAAACCACCTGTGCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PHSSKALPIPDFLSLCTPGPREP*KPPVPF Trigger: GAAGGGCACAGGTGGTTTCCAAGGTTCTCTGGGTCC...TGGTGTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CAA 90 bp | AGTGAATTTCATACATGGCTCAGATGGTTAAATTCATTTCTAAACTaGTGTTTCACCAGCCCCCACTCTTCAAAAGCCCTGCCCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SEFHTWLRWLNSFLN*CFTSPHSSKALPIP Trigger: TGGGATGGGCAGGGCTTTTGAAGAGTGGGGGCTGGTGAAACACAAGTTTAGAAATGAATTTAACCATCTGAGCCATGTATGAAATTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR-3UTR CCA 90 bp | TTTCATACATGGCTCAGATGGTTAAATTCATTTCTAAACTTGTGTTTCACCAGCGGACCCAGAGAACCTTaGAAACCACCTGTGCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: FHTWLRWLNSFLNLCFTSGPREP*KPPVPF Trigger: GAAGGGCACAGGTGGTTTCCAAGGTTCTCTGGGTCC...GCTGGTGAAACACAAGTTTAGAAATGAATTTAACCATCTGAGCCATGTATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCATACATGGCTCAGATGGTTAAATTCATTTCTAAACTTGTGTTTCACCAGCACTCTTCAAAAGCCCTaGCCATCCCAGACTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: FHTWLRWLNSFLNLCFTSTLQKP*PSQTFS Trigger: AGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGT...GCTGGTGAAACACAAGTTTAGAAATGAATTTAACCATCTGAGCCATGTATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR GCA 72 bp | GGCACCTGCCCTGCACTGTCTGGAGGCCTTGGTGTTTaGGGTACCCAGGCTTGGGGGTCAGGCAAAGGGGGC | + |
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Preference number: 3 (lower is better) Translates to: GTCPALSGGLGV*GTQAWGSGKGG Trigger: GCCCCCTTTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR GCA 72 bp | GCAGAACCTGCTGTCAGCATCTCAGGCCCTGGCACCTaGCCTGCACTGTCTGGAGGCCTTGGTGTTTGCGGT | + |
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Preference number: 3 (lower is better) Translates to: AEPAVSISGPGT*PALSGGLGVCG Trigger: ACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCCAGGGCCTGAGATGCTGACAGCAGGTTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CCA 72 bp | GGATGCTGCAGAACCTGCTGTCAGCATCTCAGGCCCTaGCACCTGCCCTGCACTGTCTGGAGGCCTTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: GCCRTCCQHLRP*HLPCTVWRPWC Trigger: ACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCCAGGGCCTGAGATGCTGACAGCAGGTTCTGCAGCATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR-3UTR CAA 90 bp | CCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTTGTACACCAAGGACCCAGAGAACCTaGGAAACCACCTGTGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: PHSSKALPIPDFLSLCTPRTQRT*ETTCAL Trigger: AAGGGCACAGGTGGTTTCCAAGGTTCTCTGGGTCCT...TGGTGTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTTGGGCAAAGGTGGAAGACTTTCTCTCCCTTaGTACACCACTTCAACACCC | + |
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Preference number: 3 (lower is better) Translates to: SGRSLSGRGREAVLGKGGRLSLP*YTTSTP Trigger: GGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCT...TCCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR GCA 72 bp | ACTTGTGTTTCACCAGCCCCCACTCTTCAAAAGCCCTaGCCATCCCAGACTTTCTCTCCCTTTGTACACCAC | + |
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Preference number: 3 (lower is better) Translates to: TCVSPAPTLQKP*PSQTFSPFVHH Trigger: GTGGTGTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGGCTGGTGAAACACAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CCA 72 bp | AGGACACCTATGCTTGAGTTTCCCAGGGAAGTGAAGTaGCTCAGTTGTCAGGACGCTCACTCTCTGGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: RTPMLEFPREVK*LSCQDAHSLEE Trigger: CTCTTCCAGAGAGTGAGCGTCCTGACAACTGAGCCACTTCACTTCCCTGGGAAACTCAAGCATAGGTGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR-3UTR CAA 90 bp | GTCAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTTGGGCAAAGGTGGAATTCATTTCTAAACTaGTGTTTCACCAGCCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: VRTLTLWKRTRGSVGQRWNSFLN*CFTSPH Trigger: GTGGGGGCTGGTGAAACACAAGTTTAGAAATGAATT...CCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CCA 72 bp | CAGAGAACCTTGGAAACCACCTGTGCCCTTCTAACCTaGAGTAGGAATTCGCTGCCTTCTTACACCTATCAG | + |
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Preference number: 3 (lower is better) Translates to: QRTLETTCALLT*SRNSLPSYTYQ Trigger: CTGATAGGTGTAAGAAGGCAGCGAATTCCTACTCCAGGTTAGAAGGGCACAGGTGGTTTCCAAGGTTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CCA 72 bp | AAATCAGGGGCCACCTCTAGAAGTGAATTTCATACATaGCTCAGATGGTTAAATTCATTTCTAAACTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: KSGATSRSEFHT*LRWLNSFLNLC Trigger: ACACAAGTTTAGAAATGAATTTAACCATCTGAGCCATGTATGAAATTCACTTCTAGAGGTGGCCCCTGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS-3UTR GCA 90 bp | AACCCCCGCCATCTATGCCCGTCCCCACCCGGTGGCCTTCCAGGTGGCCTGCAGGTCCAGGCTGGAAGGTaGTGGGGCCCGGGCGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: NPRHLCPSPPGGLPGGLQVQAGR*WGPGGH Trigger: GTGGCCGCCCGGGCCCCAGCACCTTCCAGCCTGGAC...CTGCAGGCCACCTGGAAGGCCACCGGGTGGGGACGGGCATAGATGGCGGGGGTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS-3UTR GCA 90 bp | GGAGGCCTTGGTGTTTGCGGTACCCAGGCTTGGGGGTCAGGCAAAGGGGGCAGAGGCCCAGCTGGAAGGTaGTCGGGCCTGGGCTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: GGLGVCGTQAWGSGKGGRGPAGR*SGLGSG Trigger: CCCCGAGCCCAGGCCCGAGCACCTTCCAGCTGGGCC...TCTGCCCCCTTTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS-3UTR CCA 90 bp | GGAGGCCTTGGTGTTTGCGGTACCCAGGCTTGGGGGTCAGGCAAAGGGGGCAGAGCCCTAGGAGGCAGCTaGGGACCCTGCGTGCCCACG | + |
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Preference number: 4 (lower is better) Translates to: GGLGVCGTQAWGSGKGGRALGGS*GPCVPT Trigger: CGTGGGCACGCAGGGTCCCCAGCTGCCTCCTAGGGC...TCTGCCCCCTTTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS-3UTR CCA 90 bp | GGAGGCCTTGGTGTTTGCGGTACCCAGGCTTGGGGGTCAGGCAAAGGGGGCAGACAGGCTGGAAGGTGCTaGGGCCCGGGCGGCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: GGLGVCGTQAWGSGKGGRQAGRC*GPGGHL Trigger: CAAGTGGCCGCCCGGGCCCCAGCACCTTCCAGCCTG...TCTGCCCCCTTTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| 3UTR CAA 72 bp | TGGCACCTGCCCTGCACTGTCTGGAGGCCTTGGTGTTaGCGGTACCCAGGCTTGGGGGTCAGGCAAAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: WHLPCTVWRPWC*RYPGLGVRQRG Trigger: CCCCCTTTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS-3UTR CCA 90 bp | CAACACCCACCCAGGACCCAGAGAACCTTGGAAACCACCTGTGCCCTTCTAACCGCCCCTGGTCCAGGCTaGAAGGTGCTGGGGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: QHPPRTQRTLETTCALLTAPGPG*KVLGPG Trigger: CCCGGGCCCCAGCACCTTCCAGCCTGGACCAGGGGC...GGTTAGAAGGGCACAGGTGGTTTCCAAGGTTCTCTGGGTCCTGGGTGGGTGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS-3UTR GCA 90 bp | AACCCCCGCCATCTATGCCCGTCCCCACCCGGTGGCCTTCCAGGTGGCCTGCAGTTGAATCTCAGAGGATaGCCTGGGGAAGGCGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: NPRHLCPSPPGGLPGGLQLNLRG*PGEGAF Trigger: AAAGGCGCCTTCCCCAGGGCATCCTCTGAGATTCAA...CTGCAGGCCACCTGGAAGGCCACCGGGTGGGGACGGGCATAGATGGCGGGGGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131776.8 |
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| CDS-3UTR CCA 90 bp | GTCAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTTGGGCAAAGGTGGCGGAGGCTGCTGGCCTaGTACAGGCCGGAGGAACCG | + |
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Preference number: 4 (lower is better) Translates to: VRTLTLWKRTRGSVGQRWRRLLA*YRPEEP Trigger: CGGTTCCTCCGGCCTGTACCAGGCCAGCAGCCTCCG...CCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131776.8 |
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| CDS-3UTR TCA 90 bp | CCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTTGTACACCATGGGCGCCTGTGGCATaGGCTGGGGCAGCCACGCGG | + |
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Preference number: 4 (lower is better) Translates to: PHSSKALPIPDFLSLCTPWAPVA*AGAATR Trigger: CCGCGTGGCTGCCCCAGCTCATGCCACAGGCGCCCA...TGGTGTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS-3UTR TCA 90 bp | CTGGCACCTGCCCTGCACTGTCTGGAGGCCTTGGTGTTTGCGGTACCCAGGCTTCGGAAGCCTCTTTGTTaGGGGACCCCCAGAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: LAPALHCLEALVFAVPRLRKPLC*GTPRAE Trigger: CTCTGCTCTGGGGGTCCCTCAACAAAGAGGCTTCCG...AAGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS-3UTR CCA 90 bp | CCCATCCCAGACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCGGTGGCCGCCGCTGCTaGAGCCCTAGGAGGCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PIPDFLSLCTPLQHPPRTGGRRC*SPRRQL Trigger: CAGCTGCCTCCTAGGGCTCCAGCAGCGGCGGCCACC...GGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGGGATGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS-3UTR CCA 90 bp | CCAGACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCAGAGAGCCCGGGCGGCCACTTaGGCCCAGCTGGAAGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PDFLSLCTPLQHPPRTQRARAAT*AQLEGA Trigger: AGCACCTTCCAGCTGGGCCCAAGTGGCCGCCCGGGC...TCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS-3UTR CCA 90 bp | CCAGACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCAGAGACACTGGCCCTGGCACTaGCACGGGCCGCACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PDFLSLCTPLQHPPRTQRHWPWH*HGPHWQ Trigger: CTGCCAGTGCGGCCCGTGCCAGTGCCAGGGCCAGTG...TCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS-3UTR CCA 90 bp | ACACCCACCCAGGACCCAGAGAACCTTGGAAACCACCTGTGCCCTTCTAACCTGCCTGGTGGGAGGAAGTaGGGCTGCTGTGGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: TPTQDPENLGNHLCPSNLPGGRK*GCCGWG Trigger: ACCCCAGCCACAGCAGCCCCACTTCCTCCCACCAGG...CAGGTTAGAAGGGCACAGGTGGTTTCCAAGGTTCTCTGGGTCCTGGGTGGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| 3UTR CAA 72 bp | ACTGTCTGGAGGCCTTGGTGTTTGCGGTACCCAGGCTaGGGGGTCAGGCAAAGGGGGCAGAAGGCTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: TVWRPWCLRYPG*GVRQRGQKAEL Trigger: CAGTTCAGCCTTCTGCCCCCTTTGCCTGACCCCCAAGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS-3UTR CCA 90 bp | AACTTGTGTTTCACCAGCCCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCGGCCTGGGCGCCTGTaGCATGAGCTGGGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NLCFTSPHSSKALPIPDFRPGRL*HELGQP Trigger: TGGCTGCCCCAGCTCATGCCACAGGCGCCCAGGCCG...AAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGGCTGGTGAAACACAAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS-3UTR CCA 90 bp | GCCCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTTGTACACCCTGGTGGGAGGAAGTaGGGCTGCTGTGGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: APTLQKPCPSQTFSPFVHPGGRK*GCCGWG Trigger: ACCCCAGCCACAGCAGCCCCACTTCCTCCCACCAGG...GTGTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS-3UTR CCA 90 bp | CCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTTGTACACCAAGAGCCGGAGGCTGCTaGCCTGGTACAGGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHSSKALPIPDFLSLCTPRAGGC*PGTGRR Trigger: CCTCCGGCCTGTACCAGGCCAGCAGCCTCCGGCTCT...TGGTGTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | CCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTTGTACACCAGCCTGTGGCATGAGCTaGGGCAGCCACGCGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PHSSKALPIPDFLSLCTPACGMS*GSHAEE Trigger: TTCCTCCGCGTGGCTGCCCCAGCTCATGCCACAGGC...TGGTGTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS-3UTR CCA 90 bp | CCCAGGACCCAGAGAACCTTGGAAACCACCTGTGCCCTTCTAACCTGGAGTAGGAGCAGAGAGGTAGCCTaGTGGGAGGAAGTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRTQRTLETTCALLTWSRSREVA*WEEVGL Trigger: CAGCCCCACTTCCTCCCACCAGGCTACCTCTCTGCT...CCTACTCCAGGTTAGAAGGGCACAGGTGGTTTCCAAGGTTCTCTGGGTCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTCACCAGCCCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTTGGCGGTGGCGGCGGTaGCAGGAAGTGGAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVSPAPTLQKPCPSQTFSWRWRR*QEVESR Trigger: TCTGCTCTCCACTTCCTGCCACCGCCGCCACCGCCA...AGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGGCTGGTGAAACACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | CCCATCCCAGACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCCTGGCTGGGCTCGGTaGGTGCTTCTGCATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PIPDFLSLCTPLQHPPRTPGWAR*VLLHPG Trigger: ACCAGGATGCAGAAGCACCCACCGAGCCCAGCCAGG...GGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGGGATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR TCA 90 bp | CAGCCCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTTGTACCGGCAGCTTGGGTTCTaGGAACCTTCTGGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPPLFKSPAHPRLSLPLYRQLGF*EPSGQP Trigger: TGGCTGCCCAGAAGGTTCTCAGAACCCAAGCTGCCG...GTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS-3UTR TCA 90 bp | TCAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTTGGGCAAAGGTGGAGTCTCTGGCTGGCTCTaGCACCAAGCCGCTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SGRSLSGRGREAVLGKGGVSGWL*HQAASM Trigger: CATAGAAGCGGCTTGGTGTCAGAGCCAGCCAGAGAC...TCCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCACCTGCCCTGCACTGTCTGGAGGCCTTGGTGTTTGCGGTACCCAGGCTTCCACATGATCAGACTTaGATCTCAGAGGATGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LAPALHCLEALVFAVPRLPHDQT*ISEDAL Trigger: CAGGGCATCCTCTGAGATTCAAGTCTGATCATGTGG...AAGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCAGAGATCTCGAGGAAGCAAGTaGCCGTGGGGCCTGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PDFLSLCTPLQHPPRTQRSRGSK*PWGLAQ Trigger: TTGGGCCAGGCCCCACGGCCACTTGCTTCCTCGAGA...TCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS-3UTR TCA 90 bp | CAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTTGGGCAAAGGTGGATTCTTCTGGCGCTCGGTaGTCAGGTAGCACTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QDAHSLEEDERQCWAKVDSSGAR*SGSTCH Trigger: GTGACAAGTGCTACCTGATCACCGAGCGCCAGAAGA...ATCCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS-3UTR TCA 90 bp | CAGCCCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTTGTACCCCCAGAGCAGAGGATaGATCCTGGCCTTCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPPLFKSPAHPRLSLPLYPQSRG*ILAFRK Trigger: CTTTCGGAAGGCCAGGATTCATCCTCTGCTCTGGGG...GTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR TCA 90 bp | CCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTTGTACACCACGGAAGCCTCTTTGTTaGGGGACCCCCAGAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PHSSKALPIPDFLSLCTPRKPLC*GTPRAE Trigger: CTCTGCTCTGGGGGTCCCTCAACAAAGAGGCTTCCG...TGGTGTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | CAACACCCACCCAGGACCCAGAGAACCTTGGAAACCACCTGTGCCCTTCTAACCCGGCATTTGCCCGTATaGCCCTTGACTGGTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHPPRTQRTLETTCALLTRHLPV*PLTGTR Trigger: TCTGGTACCAGTCAAGGGCCATACGGGCAAATGCCG...GGTTAGAAGGGCACAGGTGGTTTCCAAGGTTCTCTGGGTCCTGGGTGGGTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTCACCAGCCCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCAGCGAGAAAGATGGTaGAGATGGTGGCGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CVSPAPTLQKPCPSQTFSQRERW*RWWRWR Trigger: CCGCCACCGCCACCATCTCCACCATCTTTCTCGCTG...AGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGGCTGGTGAAACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCAGAGACAGCGAGAAAGATGGTaGAGATGGTGGCGGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PDFLSLCTPLQHPPRTQRQRERW*RWWRWR Trigger: CCGCCACCGCCACCATCTCCACCATCTTTCTCGCTG...TCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCAGAGAACCTCCTGGCTGGGCTCGGTaGGTGCTTCTGCATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFSPFVHHFNTHPGPREPPGWAR*VLLHPG Trigger: ACCAGGATGCAGAAGCACCCACCGAGCCCAGCCAGG...AGGTTCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR TCA 90 bp | CCAGACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCAGAGACCCCAGAGCAGAGGATaGATCCTGGCCTTCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PDFLSLCTPLQHPPRTQRPQSRG*ILAFRK Trigger: CTTTCGGAAGGCCAGGATTCATCCTCTGCTCTGGGG...TCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR TCA 90 bp | CCAGACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCAGAGAGTCTCTGGCTGGCTCTaGCACCAAGCCGCTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: PDFLSLCTPLQHPPRTQRVSGWL*HQAASM Trigger: CATAGAAGCGGCTTGGTGTCAGAGCCAGCCAGAGAC...TCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR GCA 90 bp | ACACCCACCCAGGACCCAGAGAACCTTGGAAACCACCTGTGCCCTTCTAACCTGTTGTCACAGATGCACTaGTTCCAGCGGCATTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TPTQDPENLGNHLCPSNLLSQMH*FQRHLP Trigger: GGGCAAATGCCGCTGGAAGCAGTGCATCTGTGACAA...CAGGTTAGAAGGGCACAGGTGGTTTCCAAGGTTCTCTGGGTCCTGGGTGGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS-3UTR GCA 90 bp | GTCAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTTGGGCAAAGGTGGCTCGGTGGGTGCTTCTaGATCCTGGTCATTGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: VRTLTLWKRTRGSVGQRWLGGCF*ILVIGI Trigger: AATACCAATGACCAGGATGCAGAAGCACCCACCGAG...CCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGTGTTTCACCAGCCCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTAGAGAGGTAGCCTGGTaGGAGGAAGTGGGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLCFTSPHSSKALPIPDFREVAW*EEVGLL Trigger: CAGCAGCCCCACTTCCTCCCACCAGGCTACCTCTCT...AAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGGCTGGTGAAACACAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | AACTTGTGTTTCACCAGCCCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTAGCAGAGAGGTAGCCTaGTGGGAGGAAGTGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLCFTSPHSSKALPIPDFSREVA*WEEVGL Trigger: CAGCCCCACTTCCTCCCACCAGGCTACCTCTCTGCT...AAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGGCTGGTGAAACACAAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGGAAATCAGGGGCCACCTCTAGAAGTGAATTTCATACATGGCTCAGATTGGCGGTGGCGGCGGTaGCAGGAAGTGGAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AWGNQGPPLEVNFIHGSDWRWRR*QEVESR Trigger: TCTGCTCTCCACTTCCTGCCACCGCCGCCACCGCCA...ATCTGAGCCATGTATGAAATTCACTTCTAGAGGTGGCCCCTGATTTCCCCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| 3UTR CAA 72 bp | ACACCACTTCAACACCCACCCAGGACCCAGAGAACCTaGGAAACCACCTGTGCCCTTCTAACCTGGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPLQHPPRTQRT*ETTCALLTWSR Trigger: CCTACTCCAGGTTAGAAGGGCACAGGTGGTTTCCAAGGTTCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCACCTGCCCTGCACTGTCTGGAGGCCTTGGTGTTTGCGGTACCCAGGCTTCTGCATCCTGGTCATTaGTATTCTCCTTGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LAPALHCLEALVFAVPRLLHPGH*YSPCLY Trigger: ATACAGACAAGGAGAATACCAATGACCAGGATGCAG...AAGCCTGGGTACCGCAAACACCAAGGCCTCCAGACAGTGCAGGGCAGGTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| 3UTR CAA 72 bp | TTCAAAAGCCCTGCCCATCCCAGACTTTCTCTCCCTTaGTACACCACTTCAACACCCACCCAGGACCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKSPAHPRLSLP*YTTSTPTQDPE Trigger: CTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGGGATGGGCAGGGCTTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGGAAATCAGGGGCCACCTCTAGAAGTGAATTTCATACATGGCTCAGATAGAGAGGTAGCCTGGTaGGAGGAAGTGGGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWGNQGPPLEVNFIHGSDREVAW*EEVGLL Trigger: CAGCAGCCCCACTTCCTCCCACCAGGCTACCTCTCT...ATCTGAGCCATGTATGAAATTCACTTCTAGAGGTGGCCCCTGATTTCCCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTTGGGCAAAGGTGGACTGCATCCTGGTCATTaGTATTCTCCTTGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SGRSLSGRGREAVLGKGGLHPGH*YSPCLY Trigger: ATACAGACAAGGAGAATACCAATGACCAGGATGCAG...TCCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCAGAGAACCTCCAGCTCCTACCACATaGTCAGACTTGAATCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFSPFVHHFNTHPGPREPPAPTT*SDLNLR Trigger: TCTGAGATTCAAGTCTGATCATGTGGTAGGAGCTGG...AGGTTCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR CCA 90 bp | TTTCATACATGGCTCAGATGGTTAAATTCATTTCTAAACTTGTGTTTCACCAGCTCTCAGAGGATGCCCTaGGGAAGGCGCCTTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FHTWLRWLNSFLNLCFTSSQRMP*GRRLSH Trigger: GTGGGAAAGGCGCCTTCCCCAGGGCATCCTCTGAGA...GCTGGTGAAACACAAGTTTAGAAATGAATTTAACCATCTGAGCCATGTATGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131776.8 |
||
| 3UTR CAA 72 bp | CATACATGGCTCAGATGGTTAAATTCATTTCTAAACTaGTGTTTCACCAGCCCCCACTCTTCAAAAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTWLRWLNSFLN*CFTSPHSSKAL Trigger: CAGGGCTTTTGAAGAGTGGGGGCTGGTGAAACACAAGTTTAGAAATGAATTTAACCATCTGAGCCATGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS-3UTR GCA 90 bp | TTTCATACATGGCTCAGATGGTTAAATTCATTTCTAAACTTGTGTTTCACCAGCAGCACTTGTCACAGATaGACTGCTTCCAGCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FHTWLRWLNSFLNLCFTSSTCHR*TASSGI Trigger: AATGCCGCTGGAAGCAGTGCATCTGTGACAAGTGCT...GCTGGTGAAACACAAGTTTAGAAATGAATTTAACCATCTGAGCCATGTATGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS-3UTR TCA 90 bp | TTTCATACATGGCTCAGATGGTTAAATTCATTTCTAAACTTGTGTTTCACCAGCCCAGCTCCTACCACATaGTCAGACTTGAATCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FHTWLRWLNSFLNLCFTSPAPTT*SDLNLR Trigger: TCTGAGATTCAAGTCTGATCATGTGGTAGGAGCTGG...GCTGGTGAAACACAAGTTTAGAAATGAATTTAACCATCTGAGCCATGTATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS CCA 90 bp | CCCGTAGTCGGCGAACGGCAGTCGGGGCACGGGCCGCACTGGCCCTaGCACTGGCACGGGCCGCACTGGCAGGTGCTGATCCGGGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVVGERQSGHGPHWP*HWHGPHWQVLIRVA Trigger: TGCTACCCGGATCAGCACCTGCCAGTGCGGCCCGTGCCAGTGCCAGGGCCAGTGCGGCCCGTGCCCCGACTGCCGTTCGCCGACTACGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS CCA 90 bp | AGGATGCCCGTAGTCGGCGAACGGCAGTCGGGGCACGGGCCGCACTaGCCCTGGCACTGGCACGGGCCGCACTGGCAGGTGCTGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RMPVVGERQSGHGPH*PWHWHGPHWQVLIR Trigger: CCGGATCAGCACCTGCCAGTGCGGCCCGTGCCAGTGCCAGGGCCAGTGCGGCCCGTGCCCCGACTGCCGTTCGCCGACTACGGGCATCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS TCA 90 bp | GGTGCTGATCCGGGTAGCAAAGCTCCGGCCTGGGCGCCTGTGGCATaGGCTGGGGCAGCCACGCGGAGGAACGGTCGCGCAGTCCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GADPGSKAPAWAPVA*AGAATRRNGRAVPR Trigger: CCGGGGGACTGCGCGACCGTTCCTCCGCGTGGCTGCCCCAGCTCATGCCACAGGCGCCCAGGCCGGAGCTTTGCTACCCGGATCAGCACC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS GCA 90 bp | CCTAGGCAGTGGGCAAATGCTGGAGCTCAAGGCGGTGGCCGCCGCTaGTGGAGCCCTAGGAGGCAGCTGGGGACCCTGCGTGCCCACGGT | + |
|
Preference number: 5 (lower is better) Translates to: PRQWANAGAQGGGRR*WSPRRQLGTLRAHG Trigger: ACCGTGGGCACGCAGGGTCCCCAGCTGCCTCCTAGGGCTCCAGCAGCGGCGGCCACCGCCTTGAGCTCCAGCATTTGCCCACTGCCTAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS CCA 90 bp | TGGCAGGTGCTGATCCGGGTAGCAAAGCTCCGGCCTGGGCGCCTGTaGCATGAGCTGGGGCAGCCACGCGGAGGAACGGTCGCGCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WQVLIRVAKLRPGRL*HELGQPRGGTVAQS Trigger: GGACTGCGCGACCGTTCCTCCGCGTGGCTGCCCCAGCTCATGCCACAGGCGCCCAGGCCGGAGCTTTGCTACCCGGATCAGCACCTGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS GCA 90 bp | GCCCTAGGAGGCAGCTGGGGACCCTGCGTGCCCACGGTCGCCACCTaGTCCTCGGCAGCTTGGGTTCTGAGAACCTTCTGGGCAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ALGGSWGPCVPTVAT*SSAAWVLRTFWAAM Trigger: CATGGCTGCCCAGAAGGTTCTCAGAACCCAAGCTGCCGAGGAGCAGGTGGCGACCGTGGGCACGCAGGGTCCCCAGCTGCCTCCTAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS CCA 90 bp | TGGGGACCCTGCGTGCCCACGGTCGCCACCTGCTCCTCGGCAGCTTaGGTTCTGAGAACCTTCTGGGCAGCCATGATCTTCTGGCGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: WGPCVPTVATCSSAA*VLRTFWAAMIFWRS Trigger: CGAGCGCCAGAAGATCATGGCTGCCCAGAAGGTTCTCAGAACCCAAGCTGCCGAGGAGCAGGTGGCGACCGTGGGCACGCAGGGTCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS-3UTR CAA 90 bp | CCAGACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCAGAGAGGCCCGGGCGGCCACTaGGGCCCAGCTGGAAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PDFLSLCTPLQHPPRTQRGPGGH*GPAGRC Trigger: GCACCTTCCAGCTGGGCCCAAGTGGCCGCCCGGGCC...TCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS-3UTR CAA 90 bp | TCAGGACGCTCACTCTCTGGAAGAGGACGAGAGGCAGTGTTGGGCAAAGGTGGAGCGGTGAGCAGTAGGTaGGCTGCAGGTCTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGRSLSGRGREAVLGKGGAVSSR*AAGLWL Trigger: CAGCCAGAGACCTGCAGCCAACCTACTGCTCACCGC...TCCACCTTTGCCCAACACTGCCTCTCGTCCTCTTCCAGAGAGTGAGCGTCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
||
| CDS TCA 90 bp | ACGGCTCTCTCTCAGGATTCCCAGCTCCTACCACATGATCAGACTTaGATCTCAGAGGATGCCCTGGGGAAGGCGCCTTTCCCACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TALSQDSQLLPHDQT*ISEDALGKAPFPPR Trigger: CCGGGGTGGGAAAGGCGCCTTCCCCAGGGCATCCTCTGAGATTCAAGTCTGATCATGTGGTAGGAGCTGGGAATCCTGAGAGAGAGCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131776.8 |
||
| CDS CCA 90 bp | ACAGATGCACTGCTTCCAGCGGCATTTGCCCGTATGGCCCTTGACTaGTACCAGATAGCCATGGTTCCGGCACCTAGAGCACTTGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TDALLPAAFARMALD*YQIAMVPAPRALGG Trigger: GCCCCCAAGTGCTCTAGGTGCCGGAACCATGGCTATCTGGTACCAGTCAAGGGCCATACGGGCAAATGCCGCTGGAAGCAGTGCATCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
||
| CDS TCA 90 bp | ACGGCTCTCTCTCAGGATTCCCAGCTCCTACCACATGATCAGACTTaGATCTCAGAGGATGCCCGTAGTCGGCGAACGGCAGTCGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: TALSQDSQLLPHDQT*ISEDARSRRTAVGA Trigger: TGCCCCGACTGCCGTTCGCCGACTACGGGCATCCTCTGAGATTCAAGTCTGATCATGTGGTAGGAGCTGGGAATCCTGAGAGAGAGCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS-3UTR CAA 90 bp | TGTGTTTCACCAGCCCCCACTCTTCAAAAGCCCTGCCCATCCCAGACTTTCTCTGCGGTGAGCAGTAGGTaGGCTGCAGGTCTCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: CVSPAPTLQKPCPSQTFSAVSSR*AAGLWL Trigger: CAGCCAGAGACCTGCAGCCAACCTACTGCTCACCGC...AGAGAAAGTCTGGGATGGGCAGGGCTTTTGAAGAGTGGGGGCTGGTGAAACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS TCA 90 bp | GAAAGGACTGGTAGGGTGAAACAGGGACGCAGGCAGGGCACTGCTTaGACGGCTCTCTCTCAGGATTCCCAGCTCCTACCACATGATCAG | + |
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Preference number: 5 (lower is better) Translates to: ERTGRVKQGRRQGTA*TALSQDSQLLPHDQ Trigger: CTGATCATGTGGTAGGAGCTGGGAATCCTGAGAGAGAGCCGTTCAAGCAGTGCCCTGCCTGCGTCCCTGTTTCACCCTACCAGTCCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS-3UTR CAA 90 bp | CCAGACTTTCTCTCCCTTTGTACACCACTTCAACACCCACCCAGGACCCAGAGATGCTTCCAGCGGCATTaGCCCGTATGGCCCTTGACT | + |
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Preference number: 5 (lower is better) Translates to: PDFLSLCTPLQHPPRTQRCFQRH*PVWPLT Trigger: AGTCAAGGGCCATACGGGCAAATGCCGCTGGAAGCA...TCTCTGGGTCCTGGGTGGGTGTTGAAGTGGTGTACAAAGGGAGAGAAAGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS GCA 90 bp | TTAGTTGGACTGCTCCTGGGGAGAGTCCTGGCTGGGCTCGGTGGGTaGTTCTGCATCCTGGTCATTGGTATTCTCCTTGTCTGTATCGTA | + |
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Preference number: 5 (lower is better) Translates to: LVGLLLGRVLAGLGG*FCILVIGILLVCIV Trigger: TACGATACAGACAAGGAGAATACCAATGACCAGGATGCAGAAGCACCCACCGAGCCCAGCCAGGACTCTCCCCAGGAGCAGTCCAACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS CCA 72 bp | GCGGCCACTTGGGCCCAGCTGGAAGGTGCTCGGGCCTaGGCTCGGGGCCTGCGGGGGCCTCTCGAGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: AATWAQLEGARA*ARGLRGPLEEA Trigger: TGCTTCCTCGAGAGGCCCCCGCAGGCCCCGAGCCCAGGCCCGAGCACCTTCCAGCTGGGCCCAAGTGGCCGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS CCA 72 bp | GGCGAACGGCAGTCGGGGCACGGGCCGCACTGGCCCTaGCACTGGCACGGGCCGCACTGGCAGGTGCTGATC | + |
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Preference number: 6 (lower is better) Translates to: GERQSGHGPHWP*HWHGPHWQVLI Trigger: GATCAGCACCTGCCAGTGCGGCCCGTGCCAGTGCCAGGGCCAGTGCGGCCCGTGCCCCGACTGCCGTTCGCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS CCA 72 bp | GTAGTCGGCGAACGGCAGTCGGGGCACGGGCCGCACTaGCCCTGGCACTGGCACGGGCCGCACTGGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VVGERQSGHGPH*PWHWHGPHWQV Trigger: CACCTGCCAGTGCGGCCCGTGCCAGTGCCAGGGCCAGTGCGGCCCGTGCCCCGACTGCCGTTCGCCGACTAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS GCA 72 bp | GCCGCTGCTGGAGCCCTAGGAGGCAGCTGGGGACCCTaGGTGCCCACGGTCGCCACCTGCTCCTCGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AAAGALGGSWGP*VPTVATCSSAA Trigger: AGCTGCCGAGGAGCAGGTGGCGACCGTGGGCACGCAGGGTCCCCAGCTGCCTCCTAGGGCTCCAGCAGCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS TCA 72 bp | CCGGGTAGCAAAGCTCCGGCCTGGGCGCCTGTGGCATaGGCTGGGGCAGCCACGCGGAGGAACGGTCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: PGSKAPAWAPVA*AGAATRRNGRA Trigger: TGCGCGACCGTTCCTCCGCGTGGCTGCCCCAGCTCATGCCACAGGCGCCCAGGCCGGAGCTTTGCTACCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS TCA 72 bp | TGGTGGCGGAGGTGGCGGCGGTGGTGGCGGCGGCGGTaGGCAGTAGGTTGGCTGCAGGTCTCTGGCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: WWRRWRRWWRRR*AVGWLQVSGWL Trigger: GAGCCAGCCAGAGACCTGCAGCCAACCTACTGCTCACCGCCGCCGCCACCACCGCCGCCACCTCCGCCACCA 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS CCA 72 bp | GCCTGGCCCAACGCCTCCCGGAACCGCCCTAGGCAGTaGGCAAATGCTGGAGCTCAAGGCGGTGGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: AWPNASRNRPRQ*ANAGAQGGGRR Trigger: GCGGCGGCCACCGCCTTGAGCTCCAGCATTTGCCCACTGCCTAGGGCGGTTCCGGGAGGCGTTGGGCCAGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS CCA 72 bp | GGGCCGCACTGGCCCTGGCACTGGCACGGGCCGCACTaGCAGGTGCTGATCCGGGTAGCAAAGCTCCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GPHWPWHWHGPH*QVLIRVAKLRP Trigger: AGGCCGGAGCTTTGCTACCCGGATCAGCACCTGCCAGTGCGGCCCGTGCCAGTGCCAGGGCCAGTGCGGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS GCA 72 bp | TGGGCAAATGCTGGAGCTCAAGGCGGTGGCCGCCGCTaGTGGAGCCCTAGGAGGCAGCTGGGGACCCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: WANAGAQGGGRR*WSPRRQLGTLR Trigger: ACGCAGGGTCCCCAGCTGCCTCCTAGGGCTCCAGCAGCGGCGGCCACCGCCTTGAGCTCCAGCATTTGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS CCA 72 bp | CCTGGGGAAGGCGCCTTTCCCACCCCGGCACCAGTCTaGGACTCCAGCTTAGAGCCGGAGGCTGCTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PGEGAFPTPAPV*DSSLEPEAAGL Trigger: CAGGCCAGCAGCCTCCGGCTCTAAGCTGGAGTCCCAGACTGGTGCCGGGGTGGGAAAGGCGCCTTCCCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131776.8 |
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| CDS CAA 90 bp | CTGGGGACCCTGCGTGCCCACGGTCGCCACCTGCTCCTCGGCAGCTaGGGTTCTGAGAACCTTCTGGGCAGCCATGATCTTCTGGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: LGTLRAHGRHLLLGS*GSENLLGSHDLLAL Trigger: GAGCGCCAGAAGATCATGGCTGCCCAGAAGGTTCTCAGAACCCAAGCTGCCGAGGAGCAGGTGGCGACCGTGGGCACGCAGGGTCCCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS CCA 72 bp | TGCGTGCCCACGGTCGCCACCTGCTCCTCGGCAGCTTaGGTTCTGAGAACCTTCTGGGCAGCCATGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: CVPTVATCSSAA*VLRTFWAAMIF Trigger: GAAGATCATGGCTGCCCAGAAGGTTCTCAGAACCCAAGCTGCCGAGGAGCAGGTGGCGACCGTGGGCACGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS CAA 72 bp | CTGCGTGCCCACGGTCGCCACCTGCTCCTCGGCAGCTaGGGTTCTGAGAACCTTCTGGGCAGCCATGATCTT | + |
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Preference number: 6 (lower is better) Translates to: LRAHGRHLLLGS*GSENLLGSHDL Trigger: AAGATCATGGCTGCCCAGAAGGTTCTCAGAACCCAAGCTGCCGAGGAGCAGGTGGCGACCGTGGGCACGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS TCA 72 bp | GGTAGGGTGAAACAGGGACGCAGGCAGGGCACTGCTTaGACGGCTCTCTCTCAGGATTCCCAGCTCCTACCA | + |
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Preference number: 6 (lower is better) Translates to: GRVKQGRRQGTA*TALSQDSQLLP Trigger: TGGTAGGAGCTGGGAATCCTGAGAGAGAGCCGTTCAAGCAGTGCCCTGCCTGCGTCCCTGTTTCACCCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS GCA 72 bp | CTGCTCCTGGGGAGAGTCCTGGCTGGGCTCGGTGGGTaGTTCTGCATCCTGGTCATTGGTATTCTCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: LLLGRVLAGLGG*FCILVIGILLV Trigger: GACAAGGAGAATACCAATGACCAGGATGCAGAAGCACCCACCGAGCCCAGCCAGGACTCTCCCCAGGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS CCA 72 bp | ACCTGCTCCTCGGCAGCTTGGGTTCTGAGAACCTTCTaGGCAGCCATGATCTTCTGGCGCTCGGTGATCAGG | + |
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Preference number: 6 (lower is better) Translates to: TCSSAAWVLRTF*AAMIFWRSVIR Trigger: CCTGATCACCGAGCGCCAGAAGATCATGGCTGCCCAGAAGGTTCTCAGAACCCAAGCTGCCGAGGAGCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS TCA 72 bp | ATCCTGGCCTTCCGAAAGTGGAAAGGACTGGTAGGGTaGAACAGGGACGCAGGCAGGGCACTGCTTGAACGG | + |
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Preference number: 6 (lower is better) Translates to: ILAFRKWKGLVG*NRDAGRALLER Trigger: CCGTTCAAGCAGTGCCCTGCCTGCGTCCCTGTTTCACCCTACCAGTCCTTTCCACTTTCGGAAGGCCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS GCA 72 bp | CTGGCTCTGACACCAAGCCGCTTCTATGGTAGGGGCTaGAGGAGACATGCCGGAAGCCTCTTTGTTGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LALTPSRFYGRG*RRHAGSLFVEG Trigger: TCCCTCAACAAAGAGGCTTCCGGCATGTCTCCTGCAGCCCCTACCATAGAAGCGGCTTGGTGTCAGAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS CCA 72 bp | CTGCTTCCAGCGGCATTTGCCCGTATGGCCCTTGACTaGTACCAGATAGCCATGGTTCCGGCACCTAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LLPAAFARMALD*YQIAMVPAPRA Trigger: TGCTCTAGGTGCCGGAACCATGGCTATCTGGTACCAGTCAAGGGCCATACGGGCAAATGCCGCTGGAAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069271.5 |
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| CDS CCA 72 bp | TACCACATGATCAGACTTGAATCTCAGAGGATGCCCTaGGGAAGGCGCCTTTCCCACCCCGGCACCAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: YHMIRLESQRMP*GRRLSHPGTSL Trigger: CAGACTGGTGCCGGGGTGGGAAAGGCGCCTTCCCCAGGGCATCCTCTGAGATTCAAGTCTGATCATGTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131776.8 |
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| CDS GCA 72 bp | CTGGGGAGAGTCCTGGCTGGGCTCGGTGGGTGCTTCTaGATCCTGGTCATTGGTATTCTCCTTGTCTGTATC | + |
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Preference number: 6 (lower is better) Translates to: LGRVLAGLGGCF*ILVIGILLVCI Trigger: GATACAGACAAGGAGAATACCAATGACCAGGATGCAGAAGCACCCACCGAGCCCAGCCAGGACTCTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069271.5 ENSMUST00000131776.8 |
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| CDS TCA 72 bp | TCTCAGGATTCCCAGCTCCTACCACATGATCAGACTTaGATCTCAGAGGATGCCCTGGGGAAGGCGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SQDSQLLPHDQT*ISEDALGKAPF Trigger: GAAAGGCGCCTTCCCCAGGGCATCCTCTGAGATTCAAGTCTGATCATGTGGTAGGAGCTGGGAATCCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131776.8 |
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