RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMRTA2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047143

Ensembl transcript IDs: ENSMUST00000061187.4

Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGTGACCCGAAGCGGGGCGAGCACCCAGACCACAGGGCTCCTCTaGGGACACCTGCGCGGTCAGCCGAGGTGCTCCCACCCACCCACC +
Preference number: 1 (lower is better)
Translates to: KVTRSGASTQTTGLL*GHLRGQPRCSHPPT
Trigger: GGTGGGTGGGTGGGAGCACCTCGGCTGACCGCGCAGGTGTCCCCAGAGGAGCCCTGTGGTCTGGGTGCTCGCCCCGCTTCGGGTCACCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR TCA 90 bp ACACACAAGAGGCTGGTCCATCCTGCCATCCACCTGAGCGCGTGTTaGGGAGGCGAGCGGAGCAGAGGGAGCAGCAGGGGTGGGCGAGGC +
Preference number: 1 (lower is better)
Translates to: THKRLVHPAIHLSAC*GGERSRGSSRGGRG
Trigger: GCCTCGCCCACCCCTGCTGCTCCCTCTGCTCCGCTCGCCTCCTCAACACGCGCTCAGGTGGATGGCAGGATGGACCAGCCTCTTGTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR TCA 90 bp GGTATTGGAGGACACACAAGAGGCTGGTCCATCCTGCCATCCACCTaGGCGCGTGTTGAGGAGGCGAGCGGAGCAGAGGGAGCAGCAGGG +
Preference number: 1 (lower is better)
Translates to: GIGGHTRGWSILPST*ARVEEASGAEGAAG
Trigger: CCCTGCTGCTCCCTCTGCTCCGCTCGCCTCCTCAACACGCGCTCAGGTGGATGGCAGGATGGACCAGCCTCTTGTGTGTCCTCCAATACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR-3UTR TCA 90 bp ACCGCTTTGGAGAACAGCCGCAGGCCGGGGGACCAGGGGTCGGCAGGGTACCTCAGGCCCGGGGGAAGGTaGCCCGAAGCGGGGCGAGCA +
Preference number: 2 (lower is better)
Translates to: TALENSRRPGDQGSAGYLRPGGR*PEAGRA
Trigger: TGCTCGCCCCGCTTCGGGTCACCTTCCCCCGGGCCT...GAGGTACCCTGCCGACCCCTGGTCCCCCGGCCTGCGGCTGTTCTCCAAAGCGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR CAA 90 bp GACACACAAGAGGCTGGTCCATCCTGCCATCCACCTGAGCGCGTGTaGAGGAGGCGAGCGGAGCAGAGGGAGCAGCAGGGGTGGGCGAGG +
Preference number: 2 (lower is better)
Translates to: DTQEAGPSCHPPERV*RRRAEQREQQGWAR
Trigger: CCTCGCCCACCCCTGCTGCTCCCTCTGCTCCGCTCGCCTCCTCAACACGCGCTCAGGTGGATGGCAGGATGGACCAGCCTCTTGTGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR CAA 90 bp ACTCACCCGACGCTCTATTCGTGCTTCAGCGCAGCCTGGACCGCTTaGGAGAACAGCCGCAGGCCGGGGGACCAGGGGTCGGCAGGGTAC +
Preference number: 2 (lower is better)
Translates to: THPTLYSCFSAAWTA*ENSRRPGDQGSAGY
Trigger: GTACCCTGCCGACCCCTGGTCCCCCGGCCTGCGGCTGTTCTCCAAAGCGGTCCAGGCTGCGCTGAAGCACGAATAGAGCGTCGGGTGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR-3UTR GCA 90 bp ACCGCTTTGGAGAACAGCCGCAGGCCGGGGGACCAGGGGTCGGCAGGGTACCTCCCGCAACGAGGAAAGTaGACCTTAGGACGTCTCTTT +
Preference number: 2 (lower is better)
Translates to: TALENSRRPGDQGSAGYLPQRGK*TLGRLF
Trigger: AAAGAGACGTCCTAAGGTGCACTTTCCTCGTTGCGG...GAGGTACCCTGCCGACCCCTGGTCCCCCGGCCTGCGGCTGTTCTCCAAAGCGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR-3UTR TCA 90 bp TATCGGCATAAGCAACAAAGAGAGCGACAAATACCGCAACGAGGAAAGTGCACCGGATCCCCAGCCTCTTaGCAACAAGGCGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: YRHKQQRERQIPQRGKCTGSPAS*QQGGQA
Trigger: GGCCTGCCCGCCTTGTTGTCAAGAGGCTGGGGATCC...GGTGCACTTTCCTCGTTGCGGTATTTGTCGCTCTCTTTGTTGCTTATGCCGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR-3UTR GCA 90 bp TATCGGCATAAGCAACAAAGAGAGCGACAAATACCGCAACGAGGAAAGTGCACCGAGGCTGGTCCATCCTaGCATCCACCTGAGCGCGTG +
Preference number: 2 (lower is better)
Translates to: YRHKQQRERQIPQRGKCTEAGPS*HPPERV
Trigger: CACGCGCTCAGGTGGATGGCAGGATGGACCAGCCTC...GGTGCACTTTCCTCGTTGCGGTATTTGTCGCTCTCTTTGTTGCTTATGCCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR-3UTR CCA 90 bp TATACATATATAAAAACTCACACTGCACCAAGGAAACCCATGCTTATCGGCATAGTCGCTGTTTCGGGGTaGCCGGGCTGCCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: YTYIKTHTAPRKPMLIGIVAVSG*PGCLAP
Trigger: TGGGGCCAGGCAGCCCGGCCACCCCGAAACAGCGAC...TATGCCGATAAGCATGGGTTTCCTTGGTGCAGTGTGAGTTTTTATATATGTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR-3UTR CCA 90 bp TATACATATATAAAAACTCACACTGCACCAAGGAAACCCATGCTTATCGGCATAGGAGGGGCCTGCAGCTaGGGGAGCAGGCTAGGTCGC +
Preference number: 2 (lower is better)
Translates to: YTYIKTHTAPRKPMLIGIGGACS*GSRLGR
Trigger: GCGACCTAGCCTGCTCCCCCAGCTGCAGGCCCCTCC...TATGCCGATAAGCATGGGTTTCCTTGGTGCAGTGTGAGTTTTTATATATGTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR-3UTR GCA 90 bp TATACATATATAAAAACTCACACTGCACCAAGGAAACCCATGCTTATCGGCATACGCGGTCAGCCGAGGTaGTCCCACCCACCCACCCAA +
Preference number: 2 (lower is better)
Translates to: YTYIKTHTAPRKPMLIGIRGQPR*SHPPTQ
Trigger: TTGGGTGGGTGGGTGGGAGCACCTCGGCTGACCGCG...TATGCCGATAAGCATGGGTTTCCTTGGTGCAGTGTGAGTTTTTATATATGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR-3UTR GCA 90 bp TATCGGCATAAGCAACAAAGAGAGCGACAAATACCGCAACGAGGAAAGTGCACCAAAGACTCGAGTCAGTaGCAAGAGATGTATACATCC +
Preference number: 2 (lower is better)
Translates to: YRHKQQRERQIPQRGKCTKDSSQ*QEMYTS
Trigger: GGATGTATACATCTCTTGGCACTGACTCGAGTCTTT...GGTGCACTTTCCTCGTTGCGGTATTTGTCGCTCTCTTTGTTGCTTATGCCGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR CCA 72 bp CGAAGCGGGGCGAGCACCCAGACCACAGGGCTCCTCTaGGGACACCTGCGCGGTCAGCCGAGGTGCTCCCAC +
Preference number: 3 (lower is better)
Translates to: RSGASTQTTGLL*GHLRGQPRCSH
Trigger: GTGGGAGCACCTCGGCTGACCGCGCAGGTGTCCCCAGAGGAGCCCTGTGGTCTGGGTGCTCGCCCCGCTTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR CCA 72 bp TGCGCAGCGTCGCTCGCTGGCGAGTCCGGGAGCTTCTaGCTCACTCACCCGACGCTCTATTCGTGCTTCAGC +
Preference number: 3 (lower is better)
Translates to: CAASLAGESGSF*LTHPTLYSCFS
Trigger: GCTGAAGCACGAATAGAGCGTCGGGTGAGTGAGCCAGAAGCTCCCGGACTCGCCAGCGAGCGACGCTGCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR TCA 72 bp GGACACACAAGAGGCTGGTCCATCCTGCCATCCACCTaGGCGCGTGTTGAGGAGGCGAGCGGAGCAGAGGGA +
Preference number: 3 (lower is better)
Translates to: GHTRGWSILPST*ARVEEASGAEG
Trigger: TCCCTCTGCTCCGCTCGCCTCCTCAACACGCGCTCAGGTGGATGGCAGGATGGACCAGCCTCTTGTGTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR GCA 72 bp CGGGTATTGGAGGACACACAAGAGGCTGGTCCATCCTaGCATCCACCTGAGCGCGTGTTGAGGAGGCGAGCG +
Preference number: 3 (lower is better)
Translates to: RVLEDTQEAGPS*HPPERVLRRRA
Trigger: CGCTCGCCTCCTCAACACGCGCTCAGGTGGATGGCAGGATGGACCAGCCTCTTGTGTGTCCTCCAATACCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR-3UTR CAA 90 bp TCTGGCTCACTCACCCGACGCTCTATTCGTGCTTCAGCGCAGCCTGGACCGCTTAAAGGGGAACGGGTATaGGAGGACACACAAGAGGCT +
Preference number: 3 (lower is better)
Translates to: SGSLTRRSIRASAQPGPLKGERV*EDTQEA
Trigger: AGCCTCTTGTGTGTCCTCCAATACCCGTTCCCCTTT...AAGCGGTCCAGGCTGCGCTGAAGCACGAATAGAGCGTCGGGTGAGTGAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR-3UTR CAA 90 bp TATCGGCATAAGCAACAAAGAGAGCGACAAATACCGCAACGAGGAAAGTGCACCGGGATCCCCAGCCTCTaGACAACAAGGCGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: YRHKQQRERQIPQRGKCTGIPSL*TTRRAG
Trigger: GCCTGCCCGCCTTGTTGTCAAGAGGCTGGGGATCCC...GGTGCACTTTCCTCGTTGCGGTATTTGTCGCTCTCTTTGTTGCTTATGCCGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR TCA 90 bp GGGGAAGGTGACCCGAAGCGGGGCGAGCACCCAGACCACAGGGCTCCTCTGGGGTCCGTTCTCCGAGCCTaGGCCGGGCCGCACCTCCGG +
Preference number: 4 (lower is better)
Translates to: GEGDPKRGEHPDHRAPLGSVLRA*AGPHLR
Trigger: CCGGAGGTGCGGCCCGGCTCAGGCTCGGAGAACGGA...CCCCAGAGGAGCCCTGTGGTCTGGGTGCTCGCCCCGCTTCGGGTCACCTTCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp GCCCGGGGGAAGGTGACCCGAAGCGGGGCGAGCACCCAGACCACAGGGCTCCTCGGCATTGGGCTGCAGTaGCGAGAAGGCGGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: ARGKVTRSGASTQTTGLLGIGLQ*REGGAA
Trigger: AGCCGCTCCGCCTTCTCGCCACTGCAGCCCAATGCC...GAGGAGCCCTGTGGTCTGGGTGCTCGCCCCGCTTCGGGTCACCTTCCCCCGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR TCA 90 bp ACCGCTTTGGAGAACAGCCGCAGGCCGGGGGACCAGGGGTCGGCAGGGTACCTCTCGGGGCGGCCGGCCTaGAGCAGCGTCTTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TALENSRRPGDQGSAGYLSGRPA*SSVLGN
Trigger: GTTTCCCAAGACGCTGCTTCAGGCCGGCCGCCCCGA...GAGGTACCCTGCCGACCCCTGGTCCCCCGGCCTGCGGCTGTTCTCCAAAGCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR GCA 90 bp ACCGCTTTGGAGAACAGCCGCAGGCCGGGGGACCAGGGGTCGGCAGGGTACCTCCTGCAATTTGGCCTCTaGGCCCCCTGCGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TALENSRRPGDQGSAGYLLQFGL*APCAPC
Trigger: GCAGGGGGCGCAGGGGGCGCAGAGGCCAAATTGCAG...GAGGTACCCTGCCGACCCCTGGTCCCCCGGCCTGCGGCTGTTCTCCAAAGCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp ACCGCTTTGGAGAACAGCCGCAGGCCGGGGGACCAGGGGTCGGCAGGGTACCTCCGACAAGGGCTTCCCTaGCGGCGGCTGCGGACTGTC +
Preference number: 4 (lower is better)
Translates to: TALENSRRPGDQGSAGYLRQGLP*RRLRTV
Trigger: GACAGTCCGCAGCCGCCGCCAGGGAAGCCCTTGTCG...GAGGTACCCTGCCGACCCCTGGTCCCCCGGCCTGCGGCTGTTCTCCAAAGCGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp GCTGGCGAGTCCGGGAGCTTCTGGCTCACTCACCCGACGCTCTATTCGTGCTTCCCGCACCGGGCACGCTaGGCAGCTCCGAGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: AGESGSFWLTHPTLYSCFPHRAR*AAPSAA
Trigger: AGCTGCGCTCGGAGCTGCCCAGCGTGCCCGGTGCGG...GAAGCACGAATAGAGCGTCGGGTGAGTGAGCCAGAAGCTCCCGGACTCGCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp GGGCTCCTCTGGGGACACCTGCGCGGTCAGCCGAGGTGCTCCCACCCACCCACCCAAACTTCTGCAATTTaGCCTCTGCGCCCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: GLLWGHLRGQPRCSHPPTQTSAI*PLRPLR
Trigger: GCGCAGGGGGCGCAGAGGCCAAATTGCAGAAGTTTG...GGTGGGTGGGTGGGAGCACCTCGGCTGACCGCGCAGGTGTCCCCAGAGGAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
3UTR CAA 72 bp ACGCTCTATTCGTGCTTCAGCGCAGCCTGGACCGCTTaGGAGAACAGCCGCAGGCCGGGGGACCAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: TLYSCFSAAWTA*ENSRRPGDQGS
Trigger: CGACCCCTGGTCCCCCGGCCTGCGGCTGTTCTCCAAAGCGGTCCAGGCTGCGCTGAAGCACGAATAGAGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR GCA 90 bp GCTGGCGAGTCCGGGAGCTTCTGGCTCACTCACCCGACGCTCTATTCGTGCTTCTCGCCGCCACAGCCCTaGAGCACCAGCTCCAGGACG +
Preference number: 4 (lower is better)
Translates to: AGESGSFWLTHPTLYSCFSPPQP*STSSRT
Trigger: CGTCCTGGAGCTGGTGCTGCAGGGCTGTGGCGGCGA...GAAGCACGAATAGAGCGTCGGGTGAGTGAGCCAGAAGCTCCCGGACTCGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp TCTGGCTCACTCACCCGACGCTCTATTCGTGCTTCAGCGCAGCCTGGACCGCTTCGGAACCCAGGGGGCTaGAGGAGCCGGGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SGSLTRRSIRASAQPGPLRNPGG*RSRGCP
Trigger: AGGACAGCCCCGGCTCCTCCAGCCCCCTGGGTTCCG...AAGCGGTCCAGGCTGCGCTGAAGCACGAATAGAGCGTCGGGTGAGTGAGCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp GCTGGCGAGTCCGGGAGCTTCTGGCTCACTCACCCGACGCTCTATTCGTGCTTCGCCAGGCCTCCGCGGTaGTGGTTGAGCACCTGCTCG +
Preference number: 4 (lower is better)
Translates to: AGESGSFWLTHPTLYSCFARPPR*WLSTCS
Trigger: CGAGCAGGTGCTCAACCACCACCGCGGAGGCCTGGC...GAAGCACGAATAGAGCGTCGGGTGAGTGAGCCAGAAGCTCCCGGACTCGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR TCA 90 bp TCTGGCTCACTCACCCGACGCTCTATTCGTGCTTCAGCGCAGCCTGGACCGCTTTGGAGTAGGGCGCCATaGAGGCCAGGCCGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: SGSLTRRSIRASAQPGPLWSRAP*RPGRGC
Trigger: ACAGCCGCGGCCTGGCCTTCATGGCGCCCTACTCCA...AAGCGGTCCAGGCTGCGCTGAAGCACGAATAGAGCGTCGGGTGAGTGAGCCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR GCA 90 bp GGTGCTCCCACCCACCCACCCAAGCAAGTCCCTAAAGCCAACTGTGAGCGGAGGACCTGCTCGATGGCCTaGACCACGTCGCCGCCACAG +
Preference number: 4 (lower is better)
Translates to: GAPTHPPKQVPKANCERRTCSMA*TTSPPQ
Trigger: CTGTGGCGGCGACGTGGTGCAGGCCATCGAGCAGGT...CCTCCGCTCACAGTTGGCTTTAGGGACTTGCTTGGGTGGGTGGGTGGGAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR GCA 90 bp GGTGCTCCCACCCACCCACCCAAGCAAGTCCCTAAAGCCAACTGTGAGCGGAGGTGGCTGGCATTGGGCTaGAGTGGCGAGAAGGCGGAG +
Preference number: 4 (lower is better)
Translates to: GAPTHPPKQVPKANCERRWLALG*SGEKAE
Trigger: CTCCGCCTTCTCGCCACTGCAGCCCAATGCCAGCCA...CCTCCGCTCACAGTTGGCTTTAGGGACTTGCTTGGGTGGGTGGGTGGGAGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR GCA 90 bp GCTGGCGAGTCCGGGAGCTTCTGGCTCACTCACCCGACGCTCTATTCGTGCTTCTGGTGGTTGAGCACCTaGTCGATGGCCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: AGESGSFWLTHPTLYSCFWWLST*SMACTT
Trigger: CGTGGTGCAGGCCATCGAGCAGGTGCTCAACCACCA...GAAGCACGAATAGAGCGTCGGGTGAGTGAGCCAGAAGCTCCCGGACTCGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp CACTCACCCGACGCTCTATTCGTGCTTCAGCGCAGCCTGGACCGCTTTGGAGAAGCGTCGGCGCCGAAGTaGCTGGCATTGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: HSPDALFVLQRSLDRFGEASAPK*LALGCS
Trigger: ACTGCAGCCCAATGCCAGCCACTTCGGCGCCGACGC...TTCTCCAAAGCGGTCCAGGCTGCGCTGAAGCACGAATAGAGCGTCGGGTGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR GCA 90 bp TCTGGCTCACTCACCCGACGCTCTATTCGTGCTTCAGCGCAGCCTGGACCGCTTGTGCCGTACAGCAATTaGAACTCGCGCGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SGSLTRRSIRASAQPGPLVPYSN*NSRASF
Trigger: GAACGAGGCGCGCGAGTTGCAATTGCTGTACGGCAC...AAGCGGTCCAGGCTGCGCTGAAGCACGAATAGAGCGTCGGGTGAGTGAGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR GCA 90 bp TATCGGCATAAGCAACAAAGAGAGCGACAAATACCGCAACGAGGAAAGTGCACCCGCTCCCAGGACAGCTaGCACCCGCCTCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YRHKQQRERQIPQRGKCTRSQDS*HPPPWR
Trigger: CCTCCAAGGAGGCGGGTGGCAGCTGTCCTGGGAGCG...GGTGCACTTTCCTCGTTGCGGTATTTGTCGCTCTCTTTGTTGCTTATGCCGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp TACATATATAAAAACTCACACTGCACCAAGGAAACCCATGCTTATCGGCATAAGGCCAGCAAGGGTCTGTaGTGCGGGGGCGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: YIYKNSHCTKETHAYRHKASKGL*CGGAVG
Trigger: GCCCACCGCGCCCCCGCACCACAGACCCTTGCTGGC...CTTATGCCGATAAGCATGGGTTTCCTTGGTGCAGTGTGAGTTTTTATATATGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp ACAGTAGATTTCAGCTATAAAACCCGATACGTACAATGTGCGAATAGTCTAATTCGGCGCCGAAGTGGCTaGCATTGGGCTGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: TVDFSYKTRYVQCANSLIRRRSG*HWAAVA
Trigger: CGCCACTGCAGCCCAATGCCAGCCACTTCGGCGCCG...AATTAGACTATTCGCACATTGTACGTATCGGGTTTTATAGCTGAAATCTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp TTATACATATATAAAAACTCACACTGCACCAAGGAAACCCATGCTTATCGGCATAGGCCTCCGCGGTGGTaGTTGAGCACCTGCTCGATG +
Preference number: 4 (lower is better)
Translates to: LYIYKNSHCTKETHAYRHRPPRW*LSTCSM
Trigger: CATCGAGCAGGTGCTCAACCACCACCGCGGAGGCCT...ATGCCGATAAGCATGGGTTTCCTTGGTGCAGTGTGAGTTTTTATATATGTATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CCA 90 bp TTATACATATATAAAAACTCACACTGCACCAAGGAAACCCATGCTTATCGGCATCGAAGTGGCTGGCATTaGGCTGCAGTGGCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LYIYKNSHCTKETHAYRHRSGWH*AAVARR
Trigger: CCTTCTCGCCACTGCAGCCCAATGCCAGCCACTTCG...ATGCCGATAAGCATGGGTTTCCTTGGTGCAGTGTGAGTTTTTATATATGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR GCA 90 bp TATACATATATAAAAACTCACACTGCACCAAGGAAACCCATGCTTATCGGCATAAACAGATCAAACTTCTaGAATTTGGCCTCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: YTYIKTHTAPRKPMLIGINRSNF*NLASAP
Trigger: GGGCGCAGAGGCCAAATTGCAGAAGTTTGATCTGTT...TATGCCGATAAGCATGGGTTTCCTTGGTGCAGTGTGAGTTTTTATATATGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CCA 90 bp GAGCCCAGCGCGCCGGGCGTCATGGCCCCGGCCAGCAAGGGTCTGTaGTGCGGGGGCGCGGTGGGCCCGGTCTGCAGCGGAGCGGGCAAC +
Preference number: 5 (lower is better)
Translates to: EPSAPGVMAPASKGL*CGGAVGPVCSGAGN
Trigger: GTTGCCCGCTCCGCTGCAGACCGGGCCCACCGCGCCCCCGCACCACAGACCCTTGCTGGCCGGGGCCATGACGCCCGGCGCGCTGGGCTC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CCA 90 bp TGCGGCAGCTGCCGCCGCAGCCACCGACGCCACCGATGCCACGGGTaGTCCCGTCGCTGTCGCTGCTGCTGTCGCCGCACCGGGCACGCT +
Preference number: 5 (lower is better)
Translates to: CGSCRRSHRRHRCHG*SRRCRCCCRRTGHA
Trigger: AGCGTGCCCGGTGCGGCGACAGCAGCAGCGACAGCGACGGGACCACCCGTGGCATCGGTGGCGTCGGTGGCTGCGGCGGCAGCTGCCGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS GCA 90 bp CACCGACGCCACCGATGCCACGGGTGGTCCCGTCGCTGTCGCTGCTaGTGTCGCCGCACCGGGCACGCTGGGCAGCTCCGAGCGCAGCTC +
Preference number: 5 (lower is better)
Translates to: HRRHRCHGWSRRCRC*CRRTGHAGQLRAQL
Trigger: GAGCTGCGCTCGGAGCTGCCCAGCGTGCCCGGTGCGGCGACAGCAGCAGCGACAGCGACGGGACCACCCGTGGCATCGGTGGCGTCGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS GCA 90 bp GGGCCCAGGCCAGCCGCCAGGCCTCCGCGGTGGTGGTTGAGCACCTaGTCGATGGCCTGCACCACGTCGCCGCCACAGCCCTGCAGCACC +
Preference number: 5 (lower is better)
Translates to: GPRPAARPPRWWLST*SMACTTSPPQPCST
Trigger: GGTGCTGCAGGGCTGTGGCGGCGACGTGGTGCAGGCCATCGAGCAGGTGCTCAACCACCACCGCGGAGGCCTGGCGGCTGGCCTGGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS TCA 90 bp AGTGGCTGGCATTGGGCTGCAGTGGCGAGAAGGCGGAGCGGCTGCTaGGCGAGCCCAGCGCGCCGGGCGTCATGGCCCCGGCCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: SGWHWAAVARRRSGC*ASPARRASWPRPAR
Trigger: CCTTGCTGGCCGGGGCCATGACGCCCGGCGCGCTGGGCTCGCTCAGCAGCCGCTCCGCCTTCTCGCCACTGCAGCCCAATGCCAGCCACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS GCA 90 bp GCCGCCAGGCCTCCGCGGTGGTGGTTGAGCACCTGCTCGATGGCCTaGACCACGTCGCCGCCACAGCCCTGCAGCACCAGCTCCAGGACG +
Preference number: 5 (lower is better)
Translates to: AARPPRWWLSTCSMA*TTSPPQPCSTSSRT
Trigger: CGTCCTGGAGCTGGTGCTGCAGGGCTGTGGCGGCGACGTGGTGCAGGCCATCGAGCAGGTGCTCAACCACCACCGCGGAGGCCTGGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CCA 90 bp TCGCCGCCACAGCCCTGCAGCACCAGCTCCAGGACGCCTCTCCGGTaGCCCGGGAAGACGCGCGTCAAGATGTCCAGCGGCGTCCGCTGC +
Preference number: 5 (lower is better)
Translates to: SPPQPCSTSSRTPLR*PGKTRVKMSSGVRC
Trigger: GCAGCGGACGCCGCTGGACATCTTGACGCGCGTCTTCCCGGGCCACCGGAGAGGCGTCCTGGAGCTGGTGCTGCAGGGCTGTGGCGGCGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CAA 90 bp GCCCTCGGGGTTCTTAGGGATCCCCAGCCTCTTGACAACAAGGCGGGCAGGCCCTTCTCAGGGGTGCCGTaGACCATGGGCCCGTACAGC +
Preference number: 5 (lower is better)
Translates to: ALGVLRDPQPLDNKAGRPFSGVP*TMGPYS
Trigger: GCTGTACGGGCCCATGGTCAACGGCACCCCTGAGAA...GGGCCTGCCCGCCTTGTTGTCAAGAGGCTGGGGATCCCTAAGAACCCCGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CAA 90 bp GGTGCTCCCACCCACCCACCCAAGCAAGTCCCTAAAGCCAACTGTGAGCGGAGGGCGATGAGCGTACACTaGGCGCACAGGCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GAPTHPPKQVPKANCERRAMSVH*AHRQSF
Trigger: GAAGGACTGCCTGTGCGCCAAGTGTACGCTCATCGC...CCTCCGCTCACAGTTGGCTTTAGGGACTTGCTTGGGTGGGTGGGTGGGAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CAA 90 bp CAACAAAGAGAGCGACAAATACCGCAACGAGGAAAGTGCACCTTAGGACGTCTCCCTCCGCGGTGGTGGTaGAGCACCTGCTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: QQRERQIPQRGKCTLGRLPPRWW*STCSMA
Trigger: GGCCATCGAGCAGGTGCTCAACCACCACCGCGGAGG...GAGACGTCCTAAGGTGCACTTTCCTCGTTGCGGTATTTGTCGCTCTCTTTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CAA 90 bp TATACATATATAAAAACTCACACTGCACCAAGGAAACCCATGCTTATCGGCATACTGCCACCCGCCTCCTaGGAGGCCCGGGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: YTYIKTHTAPRKPMLIGILPPAS*EARARG
Trigger: GCCTCTGGCCCGGGCCTCCAAGGAGGCGGGTGGCAG...TATGCCGATAAGCATGGGTTTCCTTGGTGCAGTGTGAGTTTTTATATATGTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CAA 90 bp TATACATATATAAAAACTCACACTGCACCAAGGAAACCCATGCTTATCGGCATATCAAACTTCTGCAATTaGGCCTCTGCGCCCCCTGCG +
Preference number: 5 (lower is better)
Translates to: YTYIKTHTAPRKPMLIGISNFCN*ASAPPA
Trigger: CGCAGGGGGCGCAGAGGCCAAATTGCAGAAGTTTGA...TATGCCGATAAGCATGGGTTTCCTTGGTGCAGTGTGAGTTTTTATATATGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS-3UTR CAA 90 bp ACAGTAGATTTCAGCTATAAAACCCGATACGTACAATGTGCGAATAGTCTAATTAGTGCCGTACAGCAATaGCAACTCGCGCGCCTCGTT +
Preference number: 5 (lower is better)
Translates to: TVDFSYKTRYVQCANSLISAVQQ*QLARLV
Trigger: AACGAGGCGCGCGAGTTGCAATTGCTGTACGGCACT...AATTAGACTATTCGCACATTGTACGTATCGGGTTTTATAGCTGAAATCTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS GCA 72 bp AAGGGTCTGTGGTGCGGGGGCGCGGTGGGCCCGGTCTaGAGCGGAGCGGGCAACCCGGCTCCCCCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: KGLWCGGAVGPV*SGAGNPAPPAA
Trigger: AGCCGCCGGGGGAGCCGGGTTGCCCGCTCCGCTGCAGACCGGGCCCACCGCGCCCCCGCACCACAGACCCTT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CCA 72 bp CCCCGGCCAGCAAGGGTCTGTGGTGCGGGGGCGCGGTaGGCCCGGTCTGCAGCGGAGCGGGCAACCCGGCTC +
Preference number: 6 (lower is better)
Translates to: PRPARVCGAGAR*ARSAAERATRL
Trigger: GAGCCGGGTTGCCCGCTCCGCTGCAGACCGGGCCCACCGCGCCCCCGCACCACAGACCCTTGCTGGCCGGGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CCA 72 bp GCGCCGGGCGTCATGGCCCCGGCCAGCAAGGGTCTGTaGTGCGGGGGCGCGGTGGGCCCGGTCTGCAGCGGA +
Preference number: 6 (lower is better)
Translates to: APGVMAPASKGL*CGGAVGPVCSG
Trigger: TCCGCTGCAGACCGGGCCCACCGCGCCCCCGCACCACAGACCCTTGCTGGCCGGGGCCATGACGCCCGGCGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS TCA 72 bp GCCGGGCCGCACCTCCGGGGACGAGGTCCGGGGACCTaGGTCCGCGCCGTCGGGCGACAAGGGCTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: AGPHLRGRGPGT*VRAVGRQGLPW
Trigger: CCAGGGAAGCCCTTGTCGCCCGACGGCGCGGACTCAGGTCCCCGGACCTCGTCCCCGGAGGTGCGGCCCGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS TCA 72 bp CATTGGGCTGCAGTGGCGAGAAGGCGGAGCGGCTGCTaGGCGAGCCCAGCGCGCCGGGCGTCATGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: HWAAVARRRSGC*ASPARRASWPR
Trigger: CCGGGGCCATGACGCCCGGCGCGCTGGGCTCGCTCAGCAGCCGCTCCGCCTTCTCGCCACTGCAGCCCAATG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS GCA 72 bp CGCCACCGATGCCACGGGTGGTCCCGTCGCTGTCGCTaGTGCTGTCGCCGCACCGGGCACGCTGGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: RHRCHGWSRRCR*CCRRTGHAGQL
Trigger: GAGCTGCCCAGCGTGCCCGGTGCGGCGACAGCAGCAGCGACAGCGACGGGACCACCCGTGGCATCGGTGGCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CCA 72 bp TGCCGCCGCAGCCACCGACGCCACCGATGCCACGGGTaGTCCCGTCGCTGTCGCTGCTGCTGTCGCCGCACC +
Preference number: 6 (lower is better)
Translates to: CRRSHRRHRCHG*SRRCRCCCRRT
Trigger: GGTGCGGCGACAGCAGCAGCGACAGCGACGGGACCACCCGTGGCATCGGTGGCGTCGGTGGCTGCGGCGGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS TCA 72 bp CCCGGAAAAGGACTCGCCGTCTCCGTTCTCCGAGCCTaGGCCGGGCCGCACCTCCGGGGACGAGGTCCGGGG +
Preference number: 6 (lower is better)
Translates to: PGKGLAVSVLRA*AGPHLRGRGPG
Trigger: CCCCGGACCTCGTCCCCGGAGGTGCGGCCCGGCTCAGGCTCGGAGAACGGAGACGGCGAGTCCTTTTCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS GCA 72 bp CACCGATGCCACGGGTGGTCCCGTCGCTGTCGCTGCTaGTGTCGCCGCACCGGGCACGCTGGGCAGCTCCGA +
Preference number: 6 (lower is better)
Translates to: HRCHGWSRRCRC*CRRTGHAGQLR
Trigger: TCGGAGCTGCCCAGCGTGCCCGGTGCGGCGACAGCAGCAGCGACAGCGACGGGACCACCCGTGGCATCGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS GCA 72 bp GCGCCCGCGTCGGCGCCGAAGTGGCTGGCATTGGGCTaGAGTGGCGAGAAGGCGGAGCGGCTGCTGAGCGAG +
Preference number: 6 (lower is better)
Translates to: APASAPKWLALG*SGEKAERLLSE
Trigger: CTCGCTCAGCAGCCGCTCCGCCTTCTCGCCACTGCAGCCCAATGCCAGCCACTTCGGCGCCGACGCGGGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CCA 72 bp CCAGAGGGTAGGCGCCCGCGTCGGCGCCGAAGTGGCTaGCATTGGGCTGCAGTGGCGAGAAGGCGGAGCGGC +
Preference number: 6 (lower is better)
Translates to: PEGRRPRRRRSG*HWAAVARRRSG
Trigger: GCCGCTCCGCCTTCTCGCCACTGCAGCCCAATGCCAGCCACTTCGGCGCCGACGCGGGCGCCTACCCTCTGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CCA 72 bp CCGCGGGCGCTCCAGCTCCAGGACCCCCGCCGTCGGTaGCGCAAACCGAGCCAAAGACTTCGTAGGCAGGCC +
Preference number: 6 (lower is better)
Translates to: PRALQLQDPRRR*RKPSQRLRRQA
Trigger: GGCCTGCCTACGAAGTCTTTGGCTCGGTTTGCGCCACCGACGGCGGGGGTCCTGGAGCTGGAGCGCCCGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CCA 72 bp CGCGTCGGCGCCGAAGTGGCTGGCATTGGGCTGCAGTaGCGAGAAGGCGGAGCGGCTGCTGAGCGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: RVGAEVAGIGLQ*REGGAAAERAQ
Trigger: CTGGGCTCGCTCAGCAGCCGCTCCGCCTTCTCGCCACTGCAGCCCAATGCCAGCCACTTCGGCGCCGACGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CAA 90 bp GGCCCGCCGCCCAGCCCCGGAGTCGGTGCGGCCTCGGCTTCTTCTTaGTCAGCCTCCGAACCCGATTCGGAACCCAGGGGGCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GPPPSPGVGAASASS*SASEPDSEPRGLEE
Trigger: CTCCTCCAGCCCCCTGGGTTCCGAATCGGGTTCGGAGGCTGACAAAGAAGAAGCCGAGGCCGCACCGACTCCGGGGCTGGGCGGCGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CCA 72 bp CAGCCCTGCAGCACCAGCTCCAGGACGCCTCTCCGGTaGCCCGGGAAGACGCGCGTCAAGATGTCCAGCGGC +
Preference number: 6 (lower is better)
Translates to: QPCSTSSRTPLR*PGKTRVKMSSG
Trigger: GCCGCTGGACATCTTGACGCGCGTCTTCCCGGGCCACCGGAGAGGCGTCCTGGAGCTGGTGCTGCAGGGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS GCA 72 bp GCCAGCGCCAGGCCCTCGGCAGTGCCGTACAGCAATTaGAACTCGCGCGCCTCGTTCTCCTCCTGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: ASARPSAVPYSN*NSRASFSSCAC
Trigger: GCAGGCGCAGGAGGAGAACGAGGCGCGCGAGTTGCAATTGCTGTACGGCACTGCCGAGGGCCTGGCGCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS GCA 72 bp TGCCGTTGGCGGCGGCCAGCGCCAGGCCCTCGGCAGTaGCGTACAGCAATTGCAACTCGCGCGCCTCGTTCT +
Preference number: 6 (lower is better)
Translates to: CRWRRPAPGPRQ*RTAIATRAPRS
Trigger: AGAACGAGGCGCGCGAGTTGCAATTGCTGTACGGCACTGCCGAGGGCCTGGCGCTGGCCGCCGCCAACGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4
CDS CAA 72 bp GGCCAGCGCCAGGCCCTCGGCAGTGCCGTACAGCAATaGCAACTCGCGCGCCTCGTTCTCCTCCTGCGCCTG +
Preference number: 6 (lower is better)
Translates to: GQRQALGSAVQQ*QLARLVLLLRL
Trigger: CAGGCGCAGGAGGAGAACGAGGCGCGCGAGTTGCAATTGCTGTACGGCACTGCCGAGGGCCTGGCGCTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061187.4