Pregenerated sensors for DMRT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048138Ensembl transcript IDs: ENSMUST00000053068.7
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTAGAACCCTCAGAGACTaGAGAAAATCCAGCTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLRTLRD*RKSSFP Trigger: AGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCT...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCCTGAGCAGCAGGCGGTaGCCTGGGTGCCAGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPLSSRR*PGCQSP Trigger: GGGGGACTGGCACCCAGGCCACCGCCTGCTGCTCAG...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCGCGGCCATGACACGCTaGCGCTCCACCACCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPAAMTR*RSTTSR Trigger: CCTGCTGGTGGTGGAGCGCCAGCGTGTCATGGCCGC...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | CAACTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGGTGTGCGGCTCAGTTTaGGCGGCTCTGCGCCGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLPRTLRDWRKSSFPCKQVCGSV*AALRRH Trigger: GTGGCGGCGCAGAGCCGCGCAAACTGAGCCGCACAC...CTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCGCTCGGCAGCTCTCCTaGAGTGGGGCTGTAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPARQLS*SGAVGT Trigger: GGTACCTACAGCCCCACTGCAGGAGAGCTGCCGAGC...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCGTCTGTTCTCGAGGCTaGGACCTCTGGCAGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPVCSRG*DLWQMG Trigger: CCCCATCTGCCAGAGGTCCCAGCCTCGAGAACAGAC...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR TCA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCATCGCTTGTGGCCCTTaGGACAGGATACCACGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPIACGP*DRIPRR Trigger: ACGGCGTGGTATCCTGTCTCAAGGGCCACAAGCGAT...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCCTCGGCGCCCTGACTTaGCTCTGGTACACTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPLGALT*LWYTAF Trigger: GAAAGCAGTGTACCAGAGGCAAGTCAGGGCGCCGAG...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | CAACTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGGGCAGCGTGCGCACTTaGGTGTGCGGCTCAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLPRTLRDWRKSSFPCKQGSVRT*VCGSVC Trigger: GCAAACTGAGCCGCACACCCAAGTGCGCACGCTGCC...CTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCGCAGCTCTCCTGCAGTaGGGCTGTAGGTACCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPAALLQ*GCRYLC Trigger: ACAAAGGTACCTACAGCCCCACTGCAGGAGAGCTGC...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTAAGGCGGTGGCCTGGGTaGCAGTCCCCCGGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRCYFYCFLECCVKHRPLRRWPG*QSPGLL Trigger: GAGCAGCCCGGGGGACTGGCACCCAGGCCACCGCCT...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCCATCATGTCTTGCTCTaGGCTAAGCCCATCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPHHVLL*AKPILN Trigger: GTTCAGGATGGGCTTAGCGCAGAGCAAGACATGATG...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | CAACTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGGCCCTGACTTGCCTCTaGTACACTGCTTTCCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: QLPRTLRDWRKSSFPCKQALTCL*YTAFRS Trigger: CGATCGGAAAGCAGTGTACCAGAGGCAAGTCAGGGC...CTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | CAACTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCAGGCACCATACGGTTaGGCAGGAATAAGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLPRTLRDWRKSSFPCKQQAPYG*AGIRQQ Trigger: CTGCTGCCTTATTCCTGCCCAACCGTATGGTGCCTG...CTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCGGCTTCTTTGACAAATaGTGCGTTCAACTCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPGFFDK*CVQLRA Trigger: GGCCCTGAGTTGAACGCACCATTTGTCAAAGAAGCC...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTATCCTCTGTGGCCTGCTaGCTCCGGAGCGCCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRCYFYCFLECCVKHRPLSSVAC*LRSATW Trigger: CCAGGTGGCGCTCCGGAGGCAGCAGGCCACAGAGGA...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCGTAAATGTGTACTTCTaGCTCTCCTTGACCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPVNVYF*LSLTKH Trigger: GTGTTTGGTCAAGGAGAGCCAGAAGTACACATTTAC...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR TCA 90 bp | TTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACAATTTGCACAGTAAGTGCAAACTCGGCGCCCTaGCTTGCCTCTGGTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLFGMLCKAQTLTICTVSANSAP*LASGTL Trigger: CAGTGTACCAGAGGCAAGTCAGGGCGCCGAGTTTGC...ACTTACTGTGCAAATTGTAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTAGTGCGCACTTGGGTGTaGGGCTCAGTTTGCGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRCYFYCFLECCVKHRPLVRTWV*GSVCAA Trigger: AGCCGCGCAAACTGAGCCGCACACCCAAGTGCGCAC...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACCTTCTTGTCCTCTGTaGCCTGCTGCCTCCGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRCYFYCFLECCVKHRPLPSCPL*PAASGA Trigger: CGCTCCGGAGGCAGCAGGCCACAGAGGACAAGAAGG...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR TCA 90 bp | TTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACAATTTGCACAGTAAGTTCCTCATCCTGTCACTaGCAGGCGGAGGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLFGMLCKAQTLTICTVSSSSCH*QAEVEE Trigger: TTCCTCTACCTCCGCCTGTCAGTGACAGGATGAGGA...ACTTACTGTGCAAATTGTAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | TTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACAATTTGCACAGTAAGTGGTGGCATCATGTCTTaGTCTGCGCTAAGCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLFGMLCKAQTLTICTVSGGIMS*SALSPS Trigger: GGATGGGCTTAGCGCAGAGCAAGACATGATGCCACC...ACTTACTGTGCAAATTGTAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR TCA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTAACTGAGAGACGTGAGTaGCGGCAGATGAAGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRCYFYCFLECCVKHRPLTERRE*RQMKAS Trigger: AGAGGCCTTCATCTGCCGTCACTCACGTCTCTCAGT...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTAGACGTGCCCTTGAGCTaGCAGGCAGTCCATATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRCYFYCFLECCVKHRPLDVPLS*QAVHIN Trigger: GTTGATATGGACTGCCTGGCAGCTCAAGGGCACGTC...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACAATTTGCACAGTAAGTCGACAGAATCGCTTGTaGCCCTTGAGACAGGATACC | + |
|
Preference number: 4 (lower is better) Translates to: LLFGMLCKAQTLTICTVSRQNRL*PLRQDT Trigger: GGTATCCTGTCTCAAGGGCCACAAGCGATTCTGTCG...ACTTACTGTGCAAATTGTAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTGAAGGCAGACCTCTCTaGAACCACCTGGTGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLEGRPL*NHLVNL Trigger: CAGGTTCACCAGGTGGTTCCAGAGAGGTCTGCCTTC...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACAATTTGCACAGTAAGTTCGCTGAGCGTCTGCTaGAATACTGAGTGGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFGMLCKAQTLTICTVSSLSVC*NTEWNG Trigger: TCCATTCCACTCAGTATTCCAGCAGACGCTCAGCGA...ACTTACTGTGCAAATTGTAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR TCA 90 bp | TTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACAATTTGCACAGTAAGTACTTCTGGCTCTCCTTaGCCAAACACTCTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLFGMLCKAQTLTICTVSTSGSP*PNTLCV Trigger: AACACAGAGAGTGTTTGGTCAAGGAGAGCCAGAAGT...ACTTACTGTGCAAATTGTAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACTTCTAAAATGCTTTTaGCCAGCAAACTCGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRCYFYCFLECCVKHRPLLLKCF*PANSAP Trigger: GGGCGCCGAGTTTGCTGGCCAAAAGCATTTTAGAAG...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTCCCGGCTTCAGAGCTTaGACAGAAGTGGTAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLPGFRA*TEVVAF Trigger: AAATGCTACCACTTCTGTCCAAGCTCTGAAGCCGGG...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR TCA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTGTGAGTGACGGCAGATaGAGGCCTCTTAAGAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLVSDGR*RPLKNR Trigger: TCTATTCTTAAGAGGCCTTCATCTGCCGTCACTCAC...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | TTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACAATTTGCACAGTAAGTTTGCCTCTGGTACACTaGTTTCCGATCGAAATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLFGMLCKAQTLTICTVSLPLVH*FPIEIV Trigger: AACAATTTCGATCGGAAAGCAGTGTACCAGAGGCAA...ACTTACTGTGCAAATTGTAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTAGTCCATATCAACAATaGGAGAGAAATTCCGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLSPYQQ*ERNSDR Trigger: CCGGTCGGAATTTCTCTCCCATTGTTGATATGGACT...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACTCTCTGTGTTTCTTTaGGGTCTCTTCAAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRCYFYCFLECCVKHRPLLSVFL*GLFKGF Trigger: GAAGCCTTTGAAGAGACCCCAAAGAAACACAGAGAG...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR TCA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTCGTCTGCTGGAATACTaGGTGGAATGGATTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLRLLEY*VEWISF Trigger: AAAACTAATCCATTCCACTCAGTATTCCAGCAGACG...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR TCA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTCTTCAAAGGCTTCTTTaGCAAATGGTGCGTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLLQRLL*QMVRST Trigger: AGTTGAACGCACCATTTGTCAAAGAAGCCTTTGAAG...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | TTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACAATTTGCACAGTAAGTGATAACCTTCTAAAATaGTTTTGGCCAGCAAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLFGMLCKAQTLTICTVSDNLLK*FWPANS Trigger: CGAGTTTGCTGGCCAAAAGCATTTTAGAAGGTTATC...ACTTACTGTGCAAATTGTAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTTCGTTCCAACTTGTTTaGCTACAAAGAGGTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLSFQLV*LQRGLL Trigger: CAAAAGACCTCTTTGTAGCCAAACAAGTTGGAACGA...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CCA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTTGGATTAGTTTTAAGTaGCAGAGAAGGTCTAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLWISFK*QRRSSV Trigger: AACACTAGACCTTCTCTGCCACTTAAAACTAATCCA...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR GCA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTTACAAAGAGGTCTTTTaGGCATCTGTCTATTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLYKEVF*ASVYCK Trigger: TTTACAATAGACAGATGCGCAAAAGACCTCTTTGTA...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS GCA 90 bp | TCGTCCTCGTCCTCCTCCCCATCGGCCGCCGCCGGACTGGGTTCCTaGGGCGGCGTGGCCCGCAGTGGAGTCCCACAGCTATCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSSPSAAAGLGS*GGVARSGVPQLSSS Trigger: GGAGGAAGATAGCTGTGGGACTCCACTGCGGGCCACGCCGCCGCAGGAACCCAGTCCGGCGGCGGCCGATGGGGAGGAGGACGAGGACGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCGGTGTGCGGCTCAGTTaGCGCGGCTCTGCGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPGVRLS*RGSAPP Trigger: TGGCGGCGCAGAGCCGCGCAAACTGAGCCGCACACC...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 90 bp | AACCACCTGGTGAACCTGAAGGTCTGTTCTCGAGGCTGGGACCTCTaGCAGATGGGGCAGCACCAGAGAGCCTTCCAGTTTGGGTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NHLVNLKVCSRGWDL*QMGQHQRAFQFGWH Trigger: ATGCCACCCAAACTGGAAGGCTCTCTGGTGCTGCCCCATCTGCCAGAGGTCCCAGCCTCGAGAACAGACCTTCAGGTTCACCAGGTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCCGGCAGCGTGCGCACTaGGGTGTGCGGCTCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPRQRAH*GVRLSL Trigger: CAAACTGAGCCGCACACCCAAGTGCGCACGCTGCCG...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS TCA 90 bp | TCCAGTTTGGGTGGCATCATGTCTTGCTCTGCGCTAAGCCCATCCTaGACTCGGGTTCCTTTCAAGTCCCAGCCGGTCCCCGGCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLGGIMSCSALSPS*TRVPFKSQPVPGFR Trigger: TCTGAAGCCGGGGACCGGCTGGGACTTGAAAGGAACCCGAGTTCAGGATGGGCTTAGCGCAGAGCAAGACATGATGCCACCCAAACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 90 bp | AATGGGAGAGAAATTCCGACCGGGTGGGGAGAAGGCAGACCTCTCTaGAACCACCTGGTGAACCTGAAGGTCTGTTCTCGAGGCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: NGREIPTGWGEGRPL*NHLVNLKVCSRGWD Trigger: GTCCCAGCCTCGAGAACAGACCTTCAGGTTCACCAGGTGGTTCCAGAGAGGTCTGCCTTCTCCCCACCCGGTCGGAATTTCTCTCCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS GCA 90 bp | CAGCACCAGAGAGCCTTCCAGTTTGGGTGGCATCATGTCTTGCTCTaGGCTAAGCCCATCCTGAACTCGGGTTCCTTTCAAGTCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QHQRAFQFGWHHVLL*AKPILNSGSFQVPA Trigger: GGCTGGGACTTGAAAGGAACCCGAGTTCAGGATGGGCTTAGCGCAGAGCAAGACATGATGCCACCCAAACTGGAAGGCTCTCTGGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 90 bp | TGCCAGGCAGTCCATATCAACAATGGGAGAGAAATTCCGACCGGGTaGGGAGAAGGCAGACCTCTCTGGAACCACCTGGTGAACCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CQAVHINNGREIPTG*GEGRPLWNHLVNLK Trigger: CTTCAGGTTCACCAGGTGGTTCCAGAGAGGTCTGCCTTCTCCCCACCCGGTCGGAATTTCTCTCCCATTGTTGATATGGACTGCCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 90 bp | TGGTTAAGACGTGCCCTTGAGCTGCCAGGCAGTCCATATCAACAATaGGAGAGAAATTCCGACCGGGTGGGGAGAAGGCAGACCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WLRRALELPGSPYQQ*ERNSDRVGRRQTSL Trigger: CAGAGAGGTCTGCCTTCTCCCCACCCGGTCGGAATTTCTCTCCCATTGTTGATATGGACTGCCTGGCAGCTCAAGGGCACGTCTTAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCCCAGGCACCATACGGTaGGGCAGGAATAAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPPGTIR*GRNKAA Trigger: TGCTGCCTTATTCCTGCCCAACCGTATGGTGCCTGG...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCAACTCAGGGCCTGATTaGTCGCTGAGCGTCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPNSGPD*SLSVCW Trigger: CCAGCAGACGCTCAGCGACAAATCAGGCCCTGAGTT...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS TCA 90 bp | CCAACTCCTTGTCAGCAAAGGCTCTTCTCTTCCTCATCCTGTCACTaGCAGGCGGAGGTAGAGGAAGGGTCCCTCCTAGGTAAGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTPCQQRLFSSSSCH*QAEVEEGSLLGKSL Trigger: CAGAGACTTACCTAGGAGGGACCCTTCCTCTACCTCCGCCTGTCAGTGACAGGATGAGGAAGAGAAGAGCCTTTGCTGACAAGGAGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | CAACTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGACTCGGCGCCCTGACTaGCCTCTGGTACACTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QLPRTLRDWRKSSFPCKQTRRPD*PLVHCF Trigger: AAAGCAGTGTACCAGAGGCAAGTCAGGGCGCCGAGT...CTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | CTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGCCCCCTTCTAAAATGCTTTaGGCCAGCAAACTCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPRTLRDWRKSSFPCKQPPSKML*ASKLGA Trigger: GGCGCCGAGTTTGCTGGCCAAAAGCATTTTAGAAGG...GGGCTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | CAACTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGGGGTGGCATCATGTCTaGCTCTGCGCTAAGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QLPRTLRDWRKSSFPCKQGWHHV*LCAKPI Trigger: GATGGGCTTAGCGCAGAGCAAGACATGATGCCACCC...CTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS TCA 90 bp | GGCGATAACCTTCTAAAATGCTTTTGGCCAGCAAACTCGGCGCCCTaGCTTGCCTCTGGTACACTGCTTTCCGATCGAAATTGTTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GDNLLKCFWPANSAP*LASGTLLSDRNCSV Trigger: AACAGAACAATTTCGATCGGAAAGCAGTGTACCAGAGGCAAGTCAGGGCGCCGAGTTTGCTGGCCAAAAGCATTTTAGAAGGTTATCGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 90 bp | TCTAAAATGCTTTTGGCCAGCAAACTCGGCGCCCTGACTTGCCTCTaGTACACTGCTTTCCGATCGAAATTGTTCTGTTTCCCAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKMLLASKLGALTCL*YTAFRSKLFCFPES Trigger: GCTTTCTGGGAAACAGAACAATTTCGATCGGAAAGCAGTGTACCAGAGGCAAGTCAGGGCGCCGAGTTTGCTGGCCAAAAGCATTTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 90 bp | AATGGTGCGTTCAACTCAGGGCCTGATTTGTCGCTGAGCGTCTGCTaGAATACTGAGTGGAATGGATTAGTTTTAAGTGGCAGAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NGAFNSGPDLSLSVC*NTEWNGLVLSGREG Trigger: ACCTTCTCTGCCACTTAAAACTAATCCATTCCACTCAGTATTCCAGCAGACGCTCAGCGACAAATCAGGCCCTGAGTTGAACGCACCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | CAACTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGGGTCTAGTGTTTTCTTaGCTGAGCTTGGTTAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: QLPRTLRDWRKSSFPCKQGLVFS*LSLVKT Trigger: CGTCTTAACCAAGCTCAGCAAAGAAAACACTAGACC...CTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS GCA 90 bp | ACAAATGGTGCGTTCAACTCAGGGCCTGATTTGTCGCTGAGCGTCTaGTGGAATACTGAGTGGAATGGATTAGTTTTAAGTGGCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TNGAFNSGPDLSLSV*WNTEWNGLVLSGRE Trigger: TTCTCTGCCACTTAAAACTAATCCATTCCACTCAGTATTCCAGCAGACGCTCAGCGACAAATCAGGCCCTGAGTTGAACGCACCATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | CAACTGCCAAGAACCCTCAGAGACTGGAGAAAATCCAGCTTCCCTTGTAAGCAGAAGTTTCGTTCCAACTaGTTTGGCTACAAAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLPRTLRDWRKSSFPCKQKFRSN*FGYKEV Trigger: GACCTCTTTGTAGCCAAACAAGTTGGAACGAAACTT...CTGCTTACAAGGGAAGCTGGATTTTCTCCAGTCTCTGAGGGTTCTTGGCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 90 bp | AACTCAGGGCCTGATTTGTCGCTGAGCGTCTGCTGGAATACTGAGTaGAATGGATTAGTTTTAAGTGGCAGAGAAGGTCTAGTGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSGPDLSLSVCWNTE*NGLVLSGREGLVFS Trigger: AGAAAACACTAGACCTTCTCTGCCACTTAAAACTAATCCATTCCACTCAGTATTCCAGCAGACGCTCAGCGACAAATCAGGCCCTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 90 bp | ACAAAGAGGTCTTTTGCGCATCTGTCTATTGTAAATGTGTACTTCTaGCTCTCCTTGACCAAACACTCTCTGTGTTTCTTTGGGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TKRSFAHLSIVNVYF*LSLTKHSLCFFGVS Trigger: AGAGACCCCAAAGAAACACAGAGAGTGTTTGGTCAAGGAGAGCCAGAAGTACACATTTACAATAGACAGATGCGCAAAAGACCTCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | TTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTACAATTTGCACAGTAAGTGCTTTCCGATCGAAATaGTTCTGTTTCCCAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFGMLCKAQTLTICTVSAFRSK*FCFPES Trigger: GCTTTCTGGGAAACAGAACAATTTCGATCGGAAAGC...ACTTACTGTGCAAATTGTAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTAATGTTCTCCAACTCCTaGTCAGCAAAGGCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRCYFYCFLECCVKHRPLMFSNS*SAKALL Trigger: GAGAAGAGCCTTTGCTGACAAGGAGTTGGAGAACAT...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTCTAATGGGACCGCACTaGGGCCAAACTAAAAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLLMGPH*GQTKNR Trigger: ACGATTTTTAGTTTGGCCCAAGTGCGGTCCCATTAG...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTAACTCTCTGTGTTTCTTaGGGGTCTCTTCAAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRCYFYCFLECCVKHRPLTLCVS*GSLQRL Trigger: AAGCCTTTGAAGAGACCCCAAAGAAACACAGAGAGT...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | AAGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTTCTTCAAAGGCTTCTTaGACAAATGGTGCGTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KTVLFLLLFGMLCKAQTLSSKAS*TNGAFN Trigger: GTTGAACGCACCATTTGTCAAAGAAGCCTTTGAAGA...AAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS-3UTR CAA 90 bp | AGACGGTGTTATTTTTATTGCTTTTTGGAATGCTGTGTAAAGCACAGACCCTTATTCGTTCCAACTTGTTaGGCTACAAAGAGGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRCYFYCFLECCVKHRPLFVPTC*ATKRSF Trigger: AAAAGACCTCTTTGTAGCCAAACAAGTTGGAACGAA...TAAGGGTCTGTGCTTTACACAGCATTCCAAAAAGCAATAAAAATAACACCGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS GCA 72 bp | GGCTGGCAGCGCCTGAGCAGCAGGCGGTGGCCTGGGTaGCAGTCCCCCGGGCTGCTCTGGCCGGCCTGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: GWQRLSSRRWPG*QSPGLLWPAWH Trigger: GTGCCAGGCCGGCCAGAGCAGCCCGGGGGACTGGCACCCAGGCCACCGCCTGCTGCTCAGGCGCTGCCAGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | AGGCGGTGGCCTGGGTGCCAGTCCCCCGGGCTGCTCTaGCCGGCCTGGCACCTCCGAGGACACGCCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RRWPGCQSPGLL*PAWHLRGHAGL Trigger: GAGCCCGGCGTGTCCTCGGAGGTGCCAGGCCGGCCAGAGCAGCCCGGGGGACTGGCACCCAGGCCACCGCCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS GCA 72 bp | TGCGCACTTGGGTGTGCGGCTCAGTTTGCGCGGCTCTaGGCCGCCACCGGCGGTGGCACCGCGCTCAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CALGCAAQFARL*AATGGGTALRG Trigger: GCCCCTGAGCGCGGTGCCACCGCCGGTGGCGGCGCAGAGCCGCGCAAACTGAGCCGCACACCCAAGTGCGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS GCA 72 bp | TCCTCCTCCCCATCGGCCGCCGCCGGACTGGGTTCCTaGGGCGGCGTGGCCCGCAGTGGAGTCCCACAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSPSAAAGLGS*GGVARSGVPQL Trigger: TAGCTGTGGGACTCCACTGCGGGCCACGCCGCCGCAGGAACCCAGTCCGGCGGCGGCCGATGGGGAGGAGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | CATCGGCCGCCGCCGGACTGGGTTCCTGCGGCGGCGTaGCCCGCAGTGGAGTCCCACAGCTATCTTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HRPPPDWVPAAA*PAVESHSYLPP Trigger: TGGAGGAAGATAGCTGTGGGACTCCACTGCGGGCCACGCCGCCGCAGGAACCCAGTCCGGCGGCGGCCGATG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS TCA 72 bp | GGTGGCATCATGTCTTGCTCTGCGCTAAGCCCATCCTaGACTCGGGTTCCTTTCAAGTCCCAGCCGGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGIMSCSALSPS*TRVPFKSQPVP Trigger: GGGGACCGGCTGGGACTTGAAAGGAACCCGAGTTCAGGATGGGCTTAGCGCAGAGCAAGACATGATGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | CAGATGGGGCAGCACCAGAGAGCCTTCCAGTTTGGGTaGCATCATGTCTTGCTCTGCGCTAAGCCCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QMGQHQRAFQFG*HHVLLCAKPIL Trigger: CAGGATGGGCTTAGCGCAGAGCAAGACATGATGCCACCCAAACTGGAAGGCTCTCTGGTGCTGCCCCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | GTGAACCTGAAGGTCTGTTCTCGAGGCTGGGACCTCTaGCAGATGGGGCAGCACCAGAGAGCCTTCCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VNLKVCSRGWDL*QMGQHQRAFQF Trigger: AAACTGGAAGGCTCTCTGGTGCTGCCCCATCTGCCAGAGGTCCCAGCCTCGAGAACAGACCTTCAGGTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | GAAATTCCGACCGGGTGGGGAGAAGGCAGACCTCTCTaGAACCACCTGGTGAACCTGAAGGTCTGTTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: EIPTGWGEGRPL*NHLVNLKVCSR Trigger: TCGAGAACAGACCTTCAGGTTCACCAGGTGGTTCCAGAGAGGTCTGCCTTCTCCCCACCCGGTCGGAATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CAA 72 bp | CACCAGAGAGCCTTCCAGTTTGGGTGGCATCATGTCTaGCTCTGCGCTAAGCCCATCCTGAACTCGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HQRAFQFGWHHV*LCAKPILNSGS Trigger: GGAACCCGAGTTCAGGATGGGCTTAGCGCAGAGCAAGACATGATGCCACCCAAACTGGAAGGCTCTCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CAA 90 bp | ATGGGGCAGCACCAGAGAGCCTTCCAGTTTGGGTGGCATCATGTCTaGCTCTGCGCTAAGCCCATCCTGAACTCGGGTTCCTTTCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: MGQHQRAFQFGWHHV*LCAKPILNSGSFQV Trigger: GACTTGAAAGGAACCCGAGTTCAGGATGGGCTTAGCGCAGAGCAAGACATGATGCCACCCAAACTGGAAGGCTCTCTGGTGCTGCCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | GTCCATATCAACAATGGGAGAGAAATTCCGACCGGGTaGGGAGAAGGCAGACCTCTCTGGAACCACCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VHINNGREIPTG*GEGRPLWNHLV Trigger: CACCAGGTGGTTCCAGAGAGGTCTGCCTTCTCCCCACCCGGTCGGAATTTCTCTCCCATTGTTGATATGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | AGTTACAGAAGTCCTTGCTCGGCAGCTCTCCTGCAGTaGGGCTGTAGGTACCTTTGTAGGAACTGTACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SYRSPCSAALLQ*GCRYLCRNCTR Trigger: CCGAGTACAGTTCCTACAAAGGTACCTACAGCCCCACTGCAGGAGAGCTGCCGAGCAAGGACTTCTGTAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS GCA 72 bp | AGAGCCTTCCAGTTTGGGTGGCATCATGTCTTGCTCTaGGCTAAGCCCATCCTGAACTCGGGTTCCTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RAFQFGWHHVLL*AKPILNSGSFQ Trigger: TTGAAAGGAACCCGAGTTCAGGATGGGCTTAGCGCAGAGCAAGACATGATGCCACCCAAACTGGAAGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS GCA 72 bp | CAGCAAACTCGGCGCCCTGACTTGCCTCTGGTACACTaGTTTCCGATCGAAATTGTTCTGTTTCCCAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QQTRRPDLPLVH*FPIEIVLFPRK Trigger: CTTTCTGGGAAACAGAACAATTTCGATCGGAAAGCAGTGTACCAGAGGCAAGTCAGGGCGCCGAGTTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | CTTTTGGCCAGCAAACTCGGCGCCCTGACTTGCCTCTaGTACACTGCTTTCCGATCGAAATTGTTCTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLASKLGALTCL*YTAFRSKLFCF Trigger: GAAACAGAACAATTTCGATCGGAAAGCAGTGTACCAGAGGCAAGTCAGGGCGCCGAGTTTGCTGGCCAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS TCA 72 bp | CTTCTAAAATGCTTTTGGCCAGCAAACTCGGCGCCCTaGCTTGCCTCTGGTACACTGCTTTCCGATCGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLKCFWPANSAP*LASGTLLSDRN Trigger: ATTTCGATCGGAAAGCAGTGTACCAGAGGCAAGTCAGGGCGCCGAGTTTGCTGGCCAAAAGCATTTTAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS TCA 72 bp | GTGTTTTCTTTGCTGAGCTTGGTTAAGACGTGCCCTTaGGCTGCCAGGCAGTCCATATCAACAATGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VFSLLSLVKTCP*AARQSISTMGE Trigger: CTCTCCCATTGTTGATATGGACTGCCTGGCAGCTCAAGGGCACGTCTTAACCAAGCTCAGCAAAGAAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS GCA 72 bp | AAAATGCTTTTGGCCAGCAAACTCGGCGCCCTGACTTaGCTCTGGTACACTGCTTTCCGATCGAAATTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: KMLLASKLGALT*LWYTAFRSKLF Trigger: GAACAATTTCGATCGGAAAGCAGTGTACCAGAGGCAAGTCAGGGCGCCGAGTTTGCTGGCCAAAAGCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CAA 72 bp | CGACAGTGGCTCATTCGCCGAAAGTTTCGTTCCAACTaGTTTGGCTACAAAGAGGTCTTTTGCGCATCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RQWLIRRKFRSN*FGYKEVFCASV Trigger: GACAGATGCGCAAAAGACCTCTTTGTAGCCAAACAAGTTGGAACGAAACTTTCGGCGAATGAGCCACTGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CAA 90 bp | ACCAAACACTCTCTGTGTTTCTTTGGGGTCTCTTCAAAGGCTTCTTaGACAAATGGTGCGTTCAACTCAGGGCCTGATTTGTCGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TKHSLCFFGVSSKAS*TNGAFNSGPDLSLS Trigger: GCTCAGCGACAAATCAGGCCCTGAGTTGAACGCACCATTTGTCAAAGAAGCCTTTGAAGAGACCCCAAAGAAACACAGAGAGTGTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CAA 90 bp | TCAAAGGCTTCTTTGACAAATGGTGCGTTCAACTCAGGGCCTGATTaGTCGCTGAGCGTCTGCTGGAATACTGAGTGGAATGGATTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SKASLTNGAFNSGPD*SLSVCWNTEWNGLV Trigger: AACTAATCCATTCCACTCAGTATTCCAGCAGACGCTCAGCGACAAATCAGGCCCTGAGTTGAACGCACCATTTGTCAAAGAAGCCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS GCA 72 bp | GCGTTCAACTCAGGGCCTGATTTGTCGCTGAGCGTCTaGTGGAATACTGAGTGGAATGGATTAGTTTTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: AFNSGPDLSLSV*WNTEWNGLVLS Trigger: ACTTAAAACTAATCCATTCCACTCAGTATTCCAGCAGACGCTCAGCGACAAATCAGGCCCTGAGTTGAACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | TTCAACTCAGGGCCTGATTTGTCGCTGAGCGTCTGCTaGAATACTGAGTGGAATGGATTAGTTTTAAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FNSGPDLSLSVC*NTEWNGLVLSG Trigger: GCCACTTAAAACTAATCCATTCCACTCAGTATTCCAGCAGACGCTCAGCGACAAATCAGGCCCTGAGTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS TCA 72 bp | GGCACCATACGGTTGGGCAGGAATAAGGCAGCAGCTTaGGATGTTTCTAACATCTCCCTCTCTTTATATTCT | + |
|
Preference number: 6 (lower is better) Translates to: GTIRLGRNKAAA*DVSNISLSLYS Trigger: AGAATATAAAGAGAGGGAGATGTTAGAAACATCTCAAGCTGCTGCCTTATTCCTGCCCAACCGTATGGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS TCA 72 bp | CTCTGTGTTTCTTTGGGGTCTCTTCAAAGGCTTCTTTaGCAAATGGTGCGTTCAACTCAGGGCCTGATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LCVSLGSLQRLL*QMVRSTQGLIC Trigger: ACAAATCAGGCCCTGAGTTGAACGCACCATTTGTCAAAGAAGCCTTTGAAGAGACCCCAAAGAAACACAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | CCTGATTTGTCGCTGAGCGTCTGCTGGAATACTGAGTaGAATGGATTAGTTTTAAGTGGCAGAGAAGGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: PDLSLSVCWNTE*NGLVLSGREGL Trigger: TAGACCTTCTCTGCCACTTAAAACTAATCCATTCCACTCAGTATTCCAGCAGACGCTCAGCGACAAATCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CAA 72 bp | TCTCTGTGTTTCTTTGGGGTCTCTTCAAAGGCTTCTTaGACAAATGGTGCGTTCAACTCAGGGCCTGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLCFFGVSSKAS*TNGAFNSGPDL Trigger: CAAATCAGGCCCTGAGTTGAACGCACCATTTGTCAAAGAAGCCTTTGAAGAGACCCCAAAGAAACACAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CAA 90 bp | GAGAACGACAGTGGCTCATTCGCCGAAAGTTTCGTTCCAACTTGTTaGGCTACAAAGAGGTCTTTTGCGCATCTGTCTATTGTAAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: ENDSGSFAESFVPTC*ATKRSFAHLSIVNV Trigger: CACATTTACAATAGACAGATGCGCAAAAGACCTCTTTGTAGCCAAACAAGTTGGAACGAAACTTTCGGCGAATGAGCCACTGTCGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CAA 90 bp | GACAGAGAACGACAGTGGCTCATTCGCCGAAAGTTTCGTTCCAACTaGTTTGGCTACAAAGAGGTCTTTTGCGCATCTGTCTATTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: DRERQWLIRRKFRSN*FGYKEVFCASVYCK Trigger: TTTACAATAGACAGATGCGCAAAAGACCTCTTTGTAGCCAAACAAGTTGGAACGAAACTTTCGGCGAATGAGCCACTGTCGTTCTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CCA 72 bp | AGGCCTCTTAAGAATAGATTCGACAGAGAACGACAGTaGCTCATTCGCCGAAAGTTTCGTTCCAACTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RPLKNRFDRERQ*LIRRKFRSNLF Trigger: AAACAAGTTGGAACGAAACTTTCGGCGAATGAGCCACTGTCGTTCTCTGTCGAATCTATTCTTAAGAGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||
| CDS CAA 90 bp | TCTTTTGCGCATCTGTCTATTGTAAATGTGTACTTCTGGCTCTCCTaGACCAAACACTCTCTGTGTTTCTTTGGGGTCTCTTCAAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SFAHLSIVNVYFWLS*TKHSLCFFGVSSKA Trigger: AGCCTTTGAAGAGACCCCAAAGAAACACAGAGAGTGTTTGGTCAAGGAGAGCCAGAAGTACACATTTACAATAGACAGATGCGCAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053068.7 |
||