Pregenerated sensors for DMRT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024837Ensembl transcript IDs: ENSMUST00000025755.11, ENSMUST00000087525.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGTTTCTTCTTACTGTATTCCTGTTACATTTGGATTTGGGGTGTaGGGTGCAGCCACCAACACATCACCAAAACATAAACAGTGTCTC | + |
|
Preference number: 1 (lower is better) Translates to: VVSSYCIPVTFGFGV*GAATNTSPKHKQCL Trigger: GAGACACTGTTTATGTTTTGGTGATGTGTTGGTGGCTGCACCCCACACCCCAAATCCAAATGTAACAGGAATACAGTAAGAAGAAACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR GCA 90 bp | ATGTATGCGTTAGTTAAACTCATTCTAGGAACAACACCCAGGAAATaGCTCCTGGGGTCACTTCACGGTGTATTGTTTTCTAAGTTACCC | + |
|
Preference number: 1 (lower is better) Translates to: MYALVKLILGTTPRK*LLGSLHGVLFSKLP Trigger: GGGTAACTTAGAAAACAATACACCGTGAAGTGACCCCAGGAGGCATTTCCTGGGTGTTGTTCCTAGAATGAGTTTAACTAACGCATACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR TCA 90 bp | TCTGGGATCCTACACTGTTACAAGTGTTTTAACCTAACTCTAACATaGACCAAACTTCTGAATGGGCAGCCAGCACTGCCAATTCAAATA | + |
|
Preference number: 1 (lower is better) Translates to: SGILHCYKCFNLTLT*TKLLNGQPALPIQI Trigger: TATTTGAATTGGCAGTGCTGGCTGCCCATTCAGAAGTTTGGTTCATGTTAGAGTTAGGTTAAAACACTTGTAACAGTGTAGGATCCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR-3UTR GCA 90 bp | GTGGTAAAGAAAATGTATGCGTTAGTTAAACTCATTCTAGGAACAACACCCAGGATTTGGGGTGTGGGGTaGAGCCACCAACACATCACC | + |
|
Preference number: 2 (lower is better) Translates to: VVKKMYALVKLILGTTPRIWGVG*SHQHIT Trigger: GGTGATGTGTTGGTGGCTGCACCCCACACCCCAAAT...CCTGGGTGTTGTTCCTAGAATGAGTTTAACTAACGCATACATTTTCTTTACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR-3UTR TCA 90 bp | TTCAAGCCAGATTACAACCTAAGGTTACAAAATCGTCTAGATTGCCTCCATTTTCATGAACCAAACTTCTaGATGGGCAGCCAGCACTGC | + |
|
Preference number: 2 (lower is better) Translates to: FKPDYNLRLQNRLDCLHFHEPNF*MGSQHC Trigger: GCAGTGCTGGCTGCCCATTCAGAAGTTTGGTTCATG...AAAATGGAGGCAATCTAGACGATTTTGTAACCTTAGGTTGTAATCTGGCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTAAAGAAAATGTATGCGTTAGTTAAACTCATTCTAGGAACAACACCCAGGCTGAGAAGTAAGGCTTaGGGAGGTTTTCCCTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VVKKMYALVKLILGTTPRLRSKA*GGFPCF Trigger: GAAACAGGGAAAACCTCCCCAAGCCTTACTTCTCAG...CCTGGGTGTTGTTCCTAGAATGAGTTTAACTAACGCATACATTTTCTTTACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTAAAGAAAATGTATGCGTTAGTTAAACTCATTCTAGGAACAACACCCAGGTATTCCTGTTACATTTaGATTTGGGGTGTGGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: VVKKMYALVKLILGTTPRYSCYI*IWGVGC Trigger: GCACCCCACACCCCAAATCCAAATGTAACAGGAATA...CCTGGGTGTTGTTCCTAGAATGAGTTTAACTAACGCATACATTTTCTTTACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR-3UTR CCA 90 bp | ACACATCACCAAAACATAAACAGTGTCTCCATTTACTGTCTGCAGAATTCTAAAAACCAAACTTCTGAATaGGCAGCCAGCACTGCCAAT | + |
|
Preference number: 2 (lower is better) Translates to: THHQNINSVSIYCLQNSKNQTSE*AASTAN Trigger: ATTGGCAGTGCTGGCTGCCCATTCAGAAGTTTGGTT...TTTAGAATTCTGCAGACAGTAAATGGAGACACTGTTTATGTTTTGGTGATGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR-3UTR TCA 90 bp | ACACATCACCAAAACATAAACAGTGTCTCCATTTACTGTCTGCAGAATTCTAAAAACCTAACTCTAACATaGACCAAACTTCTGAATGGG | + |
|
Preference number: 2 (lower is better) Translates to: THHQNINSVSIYCLQNSKNLTLT*TKLLNG Trigger: CCCATTCAGAAGTTTGGTTCATGTTAGAGTTAGGTT...TTTAGAATTCTGCAGACAGTAAATGGAGACACTGTTTATGTTTTGGTGATGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR CCA 72 bp | CGCTGTGGTTTCTTCTTACTGTATTCCTGTTACATTTaGATTTGGGGTGTGGGGTGCAGCCACCAACACATC | + |
|
Preference number: 3 (lower is better) Translates to: RCGFFLLYSCYI*IWGVGCSHQHI Trigger: GATGTGTTGGTGGCTGCACCCCACACCCCAAATCCAAATGTAACAGGAATACAGTAAGAAGAAACCACAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR CCA 72 bp | GGTTTCTTCTTACTGTATTCCTGTTACATTTGGATTTaGGGTGTGGGGTGCAGCCACCAACACATCACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GFFLLYSCYIWI*GVGCSHQHITK Trigger: TTTGGTGATGTGTTGGTGGCTGCACCCCACACCCCAAATCCAAATGTAACAGGAATACAGTAAGAAGAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR GCA 72 bp | TTAGTTAAACTCATTCTAGGAACAACACCCAGGAAATaGCTCCTGGGGTCACTTCACGGTGTATTGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LVKLILGTTPRK*LLGSLHGVLFS Trigger: AGAAAACAATACACCGTGAAGTGACCCCAGGAGGCATTTCCTGGGTGTTGTTCCTAGAATGAGTTTAACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR CCA 72 bp | TCTTACTGTATTCCTGTTACATTTGGATTTGGGGTGTaGGGTGCAGCCACCAACACATCACCAAAACATAAA | + |
|
Preference number: 3 (lower is better) Translates to: SYCIPVTFGFGV*GAATNTSPKHK Trigger: TTTATGTTTTGGTGATGTGTTGGTGGCTGCACCCCACACCCCAAATCCAAATGTAACAGGAATACAGTAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | GACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGTGGGGTGCTGGCCGGTaGGGGCTGGGCAGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQSSPGGGSLVLILFQDLWGAGR*GLGRAA Trigger: AGCAGCTCTGCCCAGCCCCCACCGGCCAGCACCCCA...CAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR TCA 90 bp | GTGACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCAGCGCTTGTGGCCCTTaGGCGGCGACGCGTAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VTRVAPAAAHSSSSSSRTSACGP*AATRSR Trigger: ACGGCTACGCGTCGCCGCTCAAGGGCCACAAGCGCT...GGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCAGGAGCTCGGCTaGGCTGGGCAGCGGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PCDQSSPGGGSLVLILFQDQELG*AGQRNW Trigger: CCAATTCCGCTGCCCAGCGCAGCCGAGCTCCTGGTC...CTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTCACAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR GCA 90 bp | CCCTGTGACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGCCTCGGGGACTTCTTaGTTCCAGAACCCAGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PCDQSSPGGGSLVLILFQASGTS*FQNPGP Trigger: CGGGCCTGGGTTCTGGAAGCAAGAAGTCCCCGAGGC...CTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTCACAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR GCA 90 bp | CAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGGTTGGGGCTGGGCAGAGCTaGTGTTCTCGGCCATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSSPGGGSLVLILFQDLVGAGQS*CSRPSG Trigger: GCCTGATGGCCGAGAACAGCAGCTCTGCCCAGCCCC...AACCAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR GCA 90 bp | GACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGCGTAGCCGTGGTTCCTaGAGCGAGCGCATTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQSSPGGGSLVLILFQDLRSRGS*SERIWA Trigger: TGCCCAAATGCGCTCGCTGCAGGAACCACGGCTACG...CAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR CCA 90 bp | GACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGTGCAGCGAGCGCATTTaGGCAGCCTCGGGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DQSSPGGGSLVLILFQDLCSERI*AASGTS Trigger: AGAAGTCCCCGAGGCTGCCCAAATGCGCTCGCTGCA...CAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR GCA 90 bp | GTGACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCCCTTCGAGCTCTCGTTaGTCATCGGAGAGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTRVAPAAAHSSSSSSRTPSSSR*SSESCW Trigger: CCAGCAGCTCTCCGATGAGCAACGAGAGCTCGAAGG...GGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR CCA 90 bp | GACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGGCTGGGCAGCGGAATTaGGTGGCTGATACCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DQSSPGGGSLVLILFQDLAGQRN*VADTQF Trigger: GAACTGGGTATCAGCCACCCAATTCCGCTGCCCAGC...CAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR TCA 90 bp | CAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGGTTACTGGCTTTGGCTTCTaGGTAGGAGGGGCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSSPGGGSLVLILFQDLVTGFGF*VGGAFL Trigger: GAGGAAGGCCCCTCCTACTCAGAAGCCAAAGCCAGT...AACCAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR GCA 90 bp | CAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGGTTTGCTCATCGGAGAGCTaGTGGAGAGGGAGACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSSPGGGSLVLILFQDLVCSSES*WRGRPS Trigger: GCTTGGTCTCCCTCTCCAGCAGCTCTCCGATGAGCA...AACCAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGGGGCGAGAACACACTaGCTTTGGCTTCTGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCDQSSPGGGSLVLILFQGARTH*LWLLSR Trigger: CCTACTCAGAAGCCAAAGCCAGTGTGTTCTCGCCCC...CTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTCACAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR CCA 90 bp | CAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGGTTTCATCGGAGAGCTGCTaGAGAGGGAGACCAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSPGGGSLVLILFQDLVSSESC*RGRPSQ Trigger: CTGGCTTGGTCTCCCTCTCCAGCAGCTCTCCGATGA...AACCAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR TCA 90 bp | CCCTGTGACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGCGGAATTGGGTGGCTaGTACCCAGTTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PCDQSSPGGGSLVLILFQAELGG*YPVLLP Trigger: AGGAAGAAGAACTGGGTATCAGCCACCCAATTCCGC...CTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTCACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR CCA 90 bp | CAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGGTTCTGCACTTCTTGCACTaGCAATCCCGCCACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSPGGGSLVLILFQDLVLHFLH*QSRHMQ Trigger: CTGCATGTGGCGGGATTGCCAGTGCAAGAAGTGCAG...AACCAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGGCAGCGGAATTGGGTaGCTGATACCCAGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PCDQSSPGGGSLVLILFQGSGIG*LIPSSS Trigger: AGAAGAACTGGGTATCAGCCACCCAATTCCGCTGCC...CTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTCACAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR CCA 90 bp | CAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGGTTAGAACACACTGGCTTTaGCTTCTGAGTAGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSSPGGGSLVLILFQDLVRTHWL*LLSRRG Trigger: GCCCCTCCTACTCAGAAGCCAAAGCCAGTGTGTTCT...AACCAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR GCA 90 bp | GTGACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCCCATCAGGCACGGGTTaGTGGCATTATTCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTRVAPAAAHSSSSSSRTPSGTG*WHYSLF Trigger: AAAGAGAGAATAATGCCAGCAACCCGTGCCTGATGG...GGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGGACAGGCTCTGGGCAAGGGAGCGAGTCTCATTACTGTTTAAACTTGGTGGACCATGCGTCCCTCTaGGGCAGCGGGGGTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KGTGSGQGSESHYCLNLVDHASL*GSGGWG Trigger: ACCCCAACCCCCGCTGCCTCAGAGGGACGCATGGTC...CACCAAGTTTAAACAGTAATGAGACTCGCTCCCTTGCCCAGAGCCTGTCCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR GCA 90 bp | AAAGGGACAGGCTCTGGGCAAGGGAGCGAGTCTCATTACTGTTTAAACTTGGTGGCCTCGGGGACTTCTTaGTTCCAGAACCCAGGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KGTGSGQGSESHYCLNLVASGTS*FQNPGP Trigger: CGGGCCTGGGTTCTGGAAGCAAGAAGTCCCCGAGGC...CACCAAGTTTAAACAGTAATGAGACTCGCTCCCTTGCCCAGAGCCTGTCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | AAAGGGACAGGCTCTGGGCAAGGGAGCGAGTCTCATTACTGTTTAAACTTGGTGTCATCGGAGAGCTGCTaGAGAGGGAGACCAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGTGSGQGSESHYCLNLVSSESC*RGRPSQ Trigger: CTGGCTTGGTCTCCCTCTCCAGCAGCTCTCCGATGA...CACCAAGTTTAAACAGTAATGAGACTCGCTCCCTTGCCCAGAGCCTGTCCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR GCA 90 bp | GAGCGAGTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGCGTAGCCGTGGTTCCTaGAGCGAGCGCATTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLLFKLGEPGTYFLQRSRGS*SERIWA Trigger: TGCCCAAATGCGCTCGCTGCAGGAACCACGGCTACG...CTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGACTCGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR TCA 90 bp | AAAGGGACAGGCTCTGGGCAAGGGAGCGAGTCTCATTACTGTTTAAACTTGGTGGCGGAATTGGGTGGCTaGTACCCAGTTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGTGSGQGSESHYCLNLVAELGG*YPVLLP Trigger: AGGAAGAAGAACTGGGTATCAGCCACCCAATTCCGC...CACCAAGTTTAAACAGTAATGAGACTCGCTCCCTTGCCCAGAGCCTGTCCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR TCA 90 bp | GAGCGAGTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGATTCCCCACCTCCCCTaGGGAGGACTCAGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLLFKLGEPGTYFLQIPHLP*GGLSRQ Trigger: TTGTCTGCTGAGTCCTCCTCAGGGGAGGTGGGGAAT...CTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGACTCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR TCA 90 bp | GGCACTTACTTCTTGCAGATGGTAGTCTGGGATCCTACACTGTTACAAGTGTTTTGGGTGGCGGCTCTCTaGGGTCTTCATCTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GTYFLQMVVWDPTLLQVFWVAAL*GLHLPL Trigger: CAGTGGCAGATGAAGACCTCAGAGAGCCGCCACCCA...AAACACTTGTAACAGTGTAGGATCCCAGACTACCATCTGCAAGAAGTAAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR GCA 90 bp | GAGCGAGTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGTGCTCATCGGAGAGCTaGTGGAGAGGGAGACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLLFKLGEPGTYFLQCSSES*WRGRPS Trigger: GCTTGGTCTCCCTCTCCAGCAGCTCTCCGATGAGCA...CTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGACTCGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCCAGATTACAACCTAAGGTTACAAAATCGTCTAGATTGCCTCCATTTTTGGGGTGCTGGCCGGTaGGGGCTGGGCAGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKPDYNLRLQNRLDCLHFWGAGR*GLGRAA Trigger: AGCAGCTCTGCCCAGCCCCCACCGGCCAGCACCCCA...AAAATGGAGGCAATCTAGACGATTTTGTAACCTTAGGTTGTAATCTGGCTTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR TCA 90 bp | TTCAAGCCAGATTACAACCTAAGGTTACAAAATCGTCTAGATTGCCTCCATTTTAGCGCTTGTGGCCCTTaGGCGGCGACGCGTAGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FKPDYNLRLQNRLDCLHFSACGP*AATRSR Trigger: ACGGCTACGCGTCGCCGCTCAAGGGCCACAAGCGCT...AAAATGGAGGCAATCTAGACGATTTTGTAACCTTAGGTTGTAATCTGGCTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR GCA 90 bp | GTGGTAAAGAAAATGTATGCGTTAGTTAAACTCATTCTAGGAACAACACCCAGGGACCAGGAGCTCGGCTaGGCTGGGCAGCGGAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVKKMYALVKLILGTTPRDQELG*AGQRNW Trigger: CCAATTCCGCTGCCCAGCGCAGCCGAGCTCCTGGTC...CCTGGGTGTTGTTCCTAGAATGAGTTTAACTAACGCATACATTTTCTTTACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR GCA 90 bp | GTGGTAAAGAAAATGTATGCGTTAGTTAAACTCATTCTAGGAACAACACCCAGGGGGGCTGGGCAGAGCTaGTGTTCTCGGCCATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVKKMYALVKLILGTTPRGAGQS*CSRPSG Trigger: GCCTGATGGCCGAGAACAGCAGCTCTGCCCAGCCCC...CCTGGGTGTTGTTCCTAGAATGAGTTTAACTAACGCATACATTTTCTTTACCAC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR GCA 90 bp | AAAGGGACAGGCTCTGGGCAAGGGAGCGAGTCTCATTACTGTTTAAACTTGGTGGATGTGTTCTCCATATaGCCTCTGCTGGTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGTGSGQGSESHYCLNLVDVFSI*PLLVTA Trigger: TGCTGTCACCAGCAGAGGGCATATGGAGAACACATC...CACCAAGTTTAAACAGTAATGAGACTCGCTCCCTTGCCCAGAGCCTGTCCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | GTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGATGGTATGCAGCGAGCGCATTTaGGCAGCCTCGGGGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLLFKLGEPGTYFLQMVCSERI*AASGTS Trigger: AGAAGTCCCCGAGGCTGCCCAAATGCGCTCGCTGCA...TACCATCTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR TCA 90 bp | GTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGATGGTAACTGGCTTTGGCTTCTaGGTAGGAGGGGCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSLLFKLGEPGTYFLQMVTGFGF*VGGAFL Trigger: GAGGAAGGCCCCTCCTACTCAGAAGCCAAAGCCAGT...TACCATCTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR GCA 90 bp | GTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGATGGTACCTTCGAGCTCTCGTTaGTCATCGGAGAGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLLFKLGEPGTYFLQMVPSSSR*SSESCW Trigger: CCAGCAGCTCTCCGATGAGCAACGAGAGCTCGAAGG...TACCATCTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | GGCACTTACTTCTTGCAGATGGTAGTCTGGGATCCTACACTGTTACAAGTGTTTCTGCACTTCTTGCACTaGCAATCCCGCCACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTYFLQMVVWDPTLLQVFLHFLH*QSRHMQ Trigger: CTGCATGTGGCGGGATTGCCAGTGCAAGAAGTGCAG...AAACACTTGTAACAGTGTAGGATCCCAGACTACCATCTGCAAGAAGTAAGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | GAGCGAGTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGGGCAGCGGAATTGGGTaGCTGATACCCAGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLLFKLGEPGTYFLQGSGIG*LIPSSS Trigger: AGAAGAACTGGGTATCAGCCACCCAATTCCGCTGCC...CTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGACTCGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | GAGCGAGTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGAGAACACACTGGCTTTaGCTTCTGAGTAGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ERVSLLFKLGEPGTYFLQRTHWL*LLSRRG Trigger: GCCCCTCCTACTCAGAAGCCAAAGCCAGTGTGTTCT...CTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGACTCGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR TCA 90 bp | GTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGATGGTACAGGAATATCCTGGATaGCCATGCGTCCCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLLFKLGEPGTYFLQMVQEYPG*PCVPLR Trigger: CCTCAGAGGGACGCATGGTCATCCAGGATATTCCTG...TACCATCTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR GCA 90 bp | GTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGATGGTAGCTCCGCAATCAGGCTaGACTTCTTGCACTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSLLFKLGEPGTYFLQMVAPQSG*TSCTGN Trigger: ATTGCCAGTGCAAGAAGTGCAGCCTGATTGCGGAGC...TACCATCTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR GCA 90 bp | GTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGATGGTAAAGGCTGGTAAAAGCTaGTGTAGTAGGCGGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLLFKLGEPGTYFLQMVKAGKS*CSRRGL Trigger: CAGACCCCGCCTACTACAGCAGCTTTTACCAGCCTT...TACCATCTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR CAA 72 bp | TCGCTGTGGTTTCTTCTTACTGTATTCCTGTTACATTaGGATTTGGGGTGTGGGGTGCAGCCACCAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLWFLLTVFLLH*DLGCGVQPPTH Trigger: ATGTGTTGGTGGCTGCACCCCACACCCCAAATCCAAATGTAACAGGAATACAGTAAGAAGAAACCACAGCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | GTGGTAAAGAAAATGTATGCGTTAGTTAAACTCATTCTAGGAACAACACCCAGGCCCAGTTCTTCTTCCTaGGCCTGCTGTCTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVKKMYALVKLILGTTPRPSSSS*ACCLLR Trigger: CCTGAGAAGACAGCAGGCCCAGGAAGAAGAACTGGG...CCTGGGTGTTGTTCCTAGAATGAGTTTAACTAACGCATACATTTTCTTTACCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | GTCTCATTACTGTTTAAACTTGGTGAGCCAGGCACTTACTTCTTGCAGATGGTAACAGCAGGAATATCCTaGATGACCATGCGTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSLLFKLGEPGTYFLQMVTAGIS*MTMRPS Trigger: AGAGGGACGCATGGTCATCCAGGATATTCCTGCTGT...TACCATCTGCAAGAAGTAAGTGCCTGGCTCACCAAGTTTAAACAGTAATGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| 3UTR CAA 72 bp | TGGTTTCTTCTTACTGTATTCCTGTTACATTTGGATTaGGGGTGTGGGGTGCAGCCACCAACACATCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: WFLLTVFLLHLD*GCGVQPPTHHQ Trigger: TTGGTGATGTGTTGGTGGCTGCACCCCACACCCCAAATCCAAATGTAACAGGAATACAGTAAGAAGAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | ACACATCACCAAAACATAAACAGTGTCTCCATTTACTGTCTGCAGAATTCTAAAGCTGGGCAGCGGAATTaGGTGGCTGATACCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: THHQNINSVSIYCLQNSKAGQRN*VADTQF Trigger: GAACTGGGTATCAGCCACCCAATTCCGCTGCCCAGC...TTTAGAATTCTGCAGACAGTAAATGGAGACACTGTTTATGTTTTGGTGATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CCA 90 bp | ACACATCACCAAAACATAAACAGTGTCTCCATTTACTGTCTGCAGAATTCTAAAGGGGCGAGAACACACTaGCTTTGGCTTCTGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: THHQNINSVSIYCLQNSKGARTH*LWLLSR Trigger: CCTACTCAGAAGCCAAAGCCAGTGTGTTCTCGCCCC...TTTAGAATTCTGCAGACAGTAAATGGAGACACTGTTTATGTTTTGGTGATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR TCA 90 bp | ACACATCACCAAAACATAAACAGTGTCTCCATTTACTGTCTGCAGAATTCTAAACATTATTCTCTCTTTTaGCCAGGAGCTCGGCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: THHQNINSVSIYCLQNSKHYSLF*PGARLR Trigger: GCGCAGCCGAGCTCCTGGTCAAAAGAGAGAATAATG...TTTAGAATTCTGCAGACAGTAAATGGAGACACTGTTTATGTTTTGGTGATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR GCA 90 bp | GTGGTAAAGAAAATGTATGCGTTAGTTAAACTCATTCTAGGAACAACACCCAGGCCATCAGGCACGGGTTaGTGGCATTATTCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVKKMYALVKLILGTTPRPSGTG*WHYSLF Trigger: AAAGAGAGAATAATGCCAGCAACCCGTGCCTGATGG...CCTGGGTGTTGTTCCTAGAATGAGTTTAACTAACGCATACATTTTCTTTACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS GCA 90 bp | TTCCAGAACCCAGGCCCGACGGCCCGGAGCCCGAGGCACCTCCGCTaGCCCCCGCGCCCGAGCCTCCAGCCGCTCCAGCCATCGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: FQNPGPTARSPRHLR*PPRPSLQPLQPSPR Trigger: CCGGGGCGATGGCTGGAGCGGCTGGAGGCTCGGGCGCGGGGGGCAGCGGAGGTGCCTCGGGCTCCGGGCCGTCGGGCCTGGGTTCTGGAA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS-3UTR CAA 90 bp | GTGACCAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCAGCCTCGGGGACTTCTaGCTTCCAGAACCCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VTRVAPAAAHSSSSSSRTSLGDF*LPEPRP Trigger: GGGCCTGGGTTCTGGAAGCAAGAAGTCCCCGAGGCT...GGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTGGTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS-3UTR CAA 90 bp | CAGAGTAGCCCCGGCGGCGGCTCACTCGTCCTCATCCTCTTCCAGGACCTGGTTCTGCAGCGAGCGCATTaGGGCAGCCTCGGGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSSPGGGSLVLILFQDLVLQRAH*GSLGDF Trigger: GAAGTCCCCGAGGCTGCCCAAATGCGCTCGCTGCAG...AACCAGGTCCTGGAAGAGGATGAGGACGAGTGAGCCGCCGCCGGGGCTACTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS GCA 90 bp | GGTCTTCATCTGCCACTGGTTTCCAGTCTGAGCAGGCACGTAAGGTaGTGGGAGACTCCGCAGGCTGTTCTTCACGGGGGATCCCCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLHLPLVSSLSRHVR*WETPQAVLHGGSPE Trigger: CTCGGGGGATCCCCCGTGAAGAACAGCCTGCGGAGTCTCCCAGCACCTTACGTGCCTGCTCAGACTGGAAACCAGTGGCAGATGAAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS CCA 90 bp | CTTCATCTGCCACTGGTTTCCAGTCTGAGCAGGCACGTAAGGTGCTaGGAGACTCCGCAGGCTGTTCTTCACGGGGGATCCCCCGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LHLPLVSSLSRHVRC*ETPQAVLHGGSPEG Trigger: TCCCTCGGGGGATCCCCCGTGAAGAACAGCCTGCGGAGTCTCCCAGCACCTTACGTGCCTGCTCAGACTGGAAACCAGTGGCAGATGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS GCA 90 bp | GCACGGGTTGCTGGCATTATTCTCTCTTTTGACCAGGAGCTCGGCTaGGCTGGGCAGCGGAATTGGGTGGCTGATACCCAGTTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ARVAGIILSFDQELG*AGQRNWVADTQFFF Trigger: GAAGAAGAACTGGGTATCAGCCACCCAATTCCGCTGCCCAGCGCAGCCGAGCTCCTGGTCAAAAGAGAGAATAATGCCAGCAACCCGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS CCA 90 bp | ATTCTCTCTTTTGACCAGGAGCTCGGCTGCGCTGGGCAGCGGAATTaGGTGGCTGATACCCAGTTCTTCTTCCTGGGCCTGCTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILSFDQELGCAGQRN*VADTQFFFLGLLSS Trigger: AGAAGACAGCAGGCCCAGGAAGAAGAACTGGGTATCAGCCACCCAATTCCGCTGCCCAGCGCAGCCGAGCTCCTGGTCAAAAGAGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS-3UTR CAA 90 bp | AAAGGGACAGGCTCTGGGCAAGGGAGCGAGTCTCATTACTGTTTAAACTTGGTGCTGCAGCGAGCGCATTaGGGCAGCCTCGGGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: KGTGSGQGSESHYCLNLVLQRAH*GSLGDF Trigger: GAAGTCCCCGAGGCTGCCCAAATGCGCTCGCTGCAG...CACCAAGTTTAAACAGTAATGAGACTCGCTCCCTTGCCCAGAGCCTGTCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CAA 90 bp | AAAGGGACAGGCTCTGGGCAAGGGAGCGAGTCTCATTACTGTTTAAACTTGGTGAGCCTCGGGGACTTCTaGCTTCCAGAACCCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KGTGSGQGSESHYCLNLVSLGDF*LPEPRP Trigger: GGGCCTGGGTTCTGGAAGCAAGAAGTCCCCGAGGCT...CACCAAGTTTAAACAGTAATGAGACTCGCTCCCTTGCCCAGAGCCTGTCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS TCA 90 bp | AGGAAACAGAGAAGGCTGGTAAAAGCTGCTGTAGTAGGCGGGGTCTaGTACCAGGTCAGATGTGTTCTCCATATGCCCTCTGCTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RKQRRLVKAAVVGGV*YQVRCVLHMPSAGD Trigger: GTCACCAGCAGAGGGCATATGGAGAACACATCTGACCTGGTATCAGACCCCGCCTACTACAGCAGCTTTTACCAGCCTTCTCTGTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS-3UTR CAA 90 bp | ACACATCACCAAAACATAAACAGTGTCTCCATTTACTGTCTGCAGAATTCTAAACTGAGGCAGCGGGGGTaGGGGTGCTGGCCGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: THHQNINSVSIYCLQNSKLRQRG*GCWPVG Trigger: CCCCACCGGCCAGCACCCCAACCCCCGCTGCCTCAG...TTTAGAATTCTGCAGACAGTAAATGGAGACACTGTTTATGTTTTGGTGATGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS GCA 72 bp | AGCCTCCAGCCGCTCCAGCCATCGCCCCGGCAGCTTTaGTGTAACCTCCGGCTTTGCCCTGCGGCGGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLQPLQPSPRQL*CNLRLCPAAGP Trigger: GGGCCCCGCCGCAGGGCAAAGCCGGAGGTTACAGCAAAGCTGCCGGGGCGATGGCTGGAGCGGCTGGAGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS CAA 90 bp | CCGTGGTTCCTGCAGCGAGCGCATTTGGGCAGCCTCGGGGACTTCTaGCTTCCAGAACCCAGGCCCGACGGCCCGGAGCCCGAGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: PWFLQRAHLGSLGDF*LPEPRPDGPEPEAP Trigger: AGGTGCCTCGGGCTCCGGGCCGTCGGGCCTGGGTTCTGGAAGCAAGAAGTCCCCGAGGCTGCCCAAATGCGCTCGCTGCAGGAACCACGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS CAA 72 bp | CTGCAGCGAGCGCATTTGGGCAGCCTCGGGGACTTCTaGCTTCCAGAACCCAGGCCCGACGGCCCGGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LQRAHLGSLGDF*LPEPRPDGPEP Trigger: GGGCTCCGGGCCGTCGGGCCTGGGTTCTGGAAGCAAGAAGTCCCCGAGGCTGCCCAAATGCGCTCGCTGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS TCA 72 bp | CATCCGGTACTGGGAGCTCACTGGGTGGCGGCTCTCTaGGGTCTTCATCTGAGGCAGCGGGGGTTGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: HPVLGAHWVAAL*GLHLRQRGLGC Trigger: GCACCCCAACCCCCGCTGCCTCAGATGAAGACCTCAGAGAGCCGCCACCCAGTGAGCTCCCAGTACCGGATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087525.5 |
||
| CDS TCA 72 bp | CATGCTCTGGCCCAGGTAGGAGGGAGGCCCGTAGTATaGGTGCATCCGGTACTGGGAGCTCACTGGGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: HALAQVGGRPVV*VHPVLGAHWVA Trigger: CGCCACCCAGTGAGCTCCCAGTACCGGATGCACTCATACTACGGGCCTCCCTCCTACCTGGGCCAGAGCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS GCA 72 bp | GCGCGGCCATCACCCGCTGTCGCTCCGCAATCAGGCTaGACTTCTTGCACTGGCAATCCCGCCACATGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: ARPSPAVAPQSG*TSCTGNPATCR Trigger: TCTGCATGTGGCGGGATTGCCAGTGCAAGAAGTGCAGCCTGATTGCGGAGCGACAGCGGGTGATGGCCGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS CCA 72 bp | GCGACGCGTAGCCGTGGTTCCTGCAGCGAGCGCATTTaGGCAGCCTCGGGGACTTCTTGCTTCCAGAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: ATRSRGSCSERI*AASGTSCFQNP Trigger: TGGGTTCTGGAAGCAAGAAGTCCCCGAGGCTGCCCAAATGCGCTCGCTGCAGGAACCACGGCTACGCGTCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS TCA 72 bp | GGAGCTCGGCTGCGCTGGGCAGCGGAATTGGGTGGCTaGTACCCAGTTCTTCTTCCTGGGCCTGCTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GARLRWAAELGG*YPVLLPGPAVF Trigger: GAAGACAGCAGGCCCAGGAAGAAGAACTGGGTATCAGCCACCCAATTCCGCTGCCCAGCGCAGCCGAGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS GCA 72 bp | CTGCCACTGGTTTCCAGTCTGAGCAGGCACGTAAGGTaGTGGGAGACTCCGCAGGCTGTTCTTCACGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LPLVSSLSRHVR*WETPQAVLHGG Trigger: TCCCCCGTGAAGAACAGCCTGCGGAGTCTCCCAGCACCTTACGTGCCTGCTCAGACTGGAAACCAGTGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS CCA 72 bp | TTTGACCAGGAGCTCGGCTGCGCTGGGCAGCGGAATTaGGTGGCTGATACCCAGTTCTTCTTCCTGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FDQELGCAGQRN*VADTQFFFLGL Trigger: CAGGCCCAGGAAGAAGAACTGGGTATCAGCCACCCAATTCCGCTGCCCAGCGCAGCCGAGCTCCTGGTCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS CCA 72 bp | CCACTGGTTTCCAGTCTGAGCAGGCACGTAAGGTGCTaGGAGACTCCGCAGGCTGTTCTTCACGGGGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: PLVSSLSRHVRC*ETPQAVLHGGS Trigger: GGATCCCCCGTGAAGAACAGCCTGCGGAGTCTCCCAGCACCTTACGTGCCTGCTCAGACTGGAAACCAGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS CAA 90 bp | CTGTTCTCGGCCATCAGGCACGGGTTGCTGGCATTATTCTCTCTTTaGACCAGGAGCTCGGCTGCGCTGGGCAGCGGAATTGGGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFSAIRHGLLALFSL*TRSSAALGSGIGWL Trigger: CAGCCACCCAATTCCGCTGCCCAGCGCAGCCGAGCTCCTGGTCAAAAGAGAGAATAATGCCAGCAACCCGTGCCTGATGGCCGAGAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS TCA 72 bp | CATCCGGTACTGGGAGCTCACTGGGTGGCGGCTCTCTaGGGTCTTCATCTGCCACTGGTTTCCAGTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HPVLGAHWVAAL*GLHLPLVSSLS Trigger: GCTCAGACTGGAAACCAGTGGCAGATGAAGACCTCAGAGAGCCGCCACCCAGTGAGCTCCCAGTACCGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS TCA 72 bp | CCATCAGGCACGGGTTGCTGGCATTATTCTCTCTTTTaGCCAGGAGCTCGGCTGCGCTGGGCAGCGGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: PSGTGCWHYSLF*PGARLRWAAEL Trigger: CAATTCCGCTGCCCAGCGCAGCCGAGCTCCTGGTCAAAAGAGAGAATAATGCCAGCAACCCGTGCCTGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS GCA 72 bp | GCTGGCATTATTCTCTCTTTTGACCAGGAGCTCGGCTaGGCTGGGCAGCGGAATTGGGTGGCTGATACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGIILSFDQELG*AGQRNWVADTQ Trigger: CTGGGTATCAGCCACCCAATTCCGCTGCCCAGCGCAGCCGAGCTCCTGGTCAAAAGAGAGAATAATGCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS CCA 72 bp | CTCCCTTCGAGCTCTCGTTGCTCATCGGAGAGCTGCTaGAGAGGGAGACCAAGCCAGAATCTTGACTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSSSRCSSESC*RGRPSQNLDCW Trigger: CCAGCAGTCAAGATTCTGGCTTGGTCTCCCTCTCCAGCAGCTCTCCGATGAGCAACGAGAGCTCGAAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS CAA 72 bp | GCCATCAGGCACGGGTTGCTGGCATTATTCTCTCTTTaGACCAGGAGCTCGGCTGCGCTGGGCAGCGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: AIRHGLLALFSL*TRSSAALGSGI Trigger: AATTCCGCTGCCCAGCGCAGCCGAGCTCCTGGTCAAAAGAGAGAATAATGCCAGCAACCCGTGCCTGATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025755.11 ENSMUST00000087525.5 |
||
| CDS GCA 72 bp | CAGACTCACATTCCAGAACTCCCTTCGAGCTCTCGTTaGTCATCGGAGAGCTGCTGGAGAGGGAGACCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: QTHIPELPSSSR*SSESCWRGRPS Trigger: GCTTGGTCTCCCTCTCCAGCAGCTCTCCGATGAGCAACGAGAGCTCGAAGGGAGTTCTGGAATGTGAGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||
| CDS TCA 72 bp | AGAAGGCTGGTAAAAGCTGCTGTAGTAGGCGGGGTCTaGTACCAGGTCAGATGTGTTCTCCATATGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRLVKAAVVGGV*YQVRCVLHMPS Trigger: AGAGGGCATATGGAGAACACATCTGACCTGGTATCAGACCCCGCCTACTACAGCAGCTTTTACCAGCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025755.11 |
||