Pregenerated sensors for DMPK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030409Ensembl transcript IDs: ENSMUST00000032568.14, ENSMUST00000108473.10, ENSMUST00000108474.2, ENSMUST00000122999.8, ENSMUST00000154199.8, ENSMUST00000238982.2
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGAGCGGAGCTaGGTGGGGACCCAGGCTCACAGAAGTGTGGAGCGGAGCGGTGGG | + |
Preference number: 1 (lower is better) Translates to: PPRPPGGRPGSQERS*VGTQAHRSVERSGG Trigger: CCCACCGCTCCGCTCCACACTTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCTCCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR GCA 90 bp | AGCTGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTaGTGGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGC | + |
Preference number: 1 (lower is better) Translates to: SCCSSGGYQLCRNQG*WARALFLPPRPPGG Trigger: GCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR CCA 90 bp | TGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTaGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGG | + |
Preference number: 1 (lower is better) Translates to: CCSSGGYQLCRNQGC*ARALFLPPRPPGGR Trigger: CCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR TCA 90 bp | GGGTTCAGGGGGCGAAGGTGGCTCCCGGGAAACACCAGACTGGGGTaGGACCGCCGGTATAGGCCACCAACCCAGTGCAGCCCAGTGTGG | + |
Preference number: 1 (lower is better) Translates to: GFRGRRWLPGNTRLG*DRRYRPPTQCSPVW Trigger: CCACACTGGGCTGCACTGGGTTGGTGGCCTATACCGGCGGTCTCACCCCAGTCTGGTGTTTCCCGGGAGCCACCTTCGCCCCCTGAACCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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3UTR CCA 90 bp | CTGAGTAAAGCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTaGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCT | + |
Preference number: 1 (lower is better) Translates to: LSKARSANAQLLQQR*LPALQEPGVLGTSP Trigger: AGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR TCA 90 bp | CTTTGGGTCGCTCCCTGGTCGCTCGACCTTCCTAGGAGGCCTAAATaGAAGATGGCTTGGAGTCTTAGGGTTCAGGGGGCGAAGGTGGCT | + |
Preference number: 1 (lower is better) Translates to: LWVAPWSLDLPRRPK*KMAWSLRVQGAKVA Trigger: AGCCACCTTCGCCCCCTGAACCCTAAGACTCCAAGCCATCTTTCATTTAGGCCTCCTAGGAAGGTCGAGCGACCAGGGAGCGACCCAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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3UTR CCA 90 bp | AAAGACTCCGTGTGTGCTGGCAGAGGTCTTGCTGATCCATCACTATaGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGCT | + |
Preference number: 1 (lower is better) Translates to: KDSVCAGRGLADPSL*EWDVPGNRGLMLMA Trigger: AGCCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTCTGCCAGCACACACGGAGTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR TCA 90 bp | CGGCAGCAGCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCGGATAGGCGCAGGGAGCAGCAGGTaGCGGCGGTGCATGGGGCCT | + |
Preference number: 2 (lower is better) Translates to: RQQPEQRRTGAGNAPRIGAGSSR*RRCMGP Trigger: AGGCCCCATGCACCGCCGTCACCTGCTGCTCCCTGC...GCCTATCCGAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGCTGCTGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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3UTR-3UTR GCA 90 bp | GTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGAGCGGAGCTGCGGCGAATGCCCAGCTaGTGCAGCAGCGGTGGCTAC | + |
Preference number: 2 (lower is better) Translates to: VPPSPAARWQAWITGAELRRMPS*CSSGGY Trigger: GTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCG...CAGCTCCGCTCCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR-3UTR GCA 90 bp | GGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAAGGCCACCAACCCAGTaGAGCCCAGTGTGGCGGCAG | + |
Preference number: 2 (lower is better) Translates to: GTSPVPPSPAARWQAWITRPPTQ*SPVWRQ Trigger: CTGCCGCCACACTGGGCTGCACTGGGTTGGTGGCCT...TGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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3UTR-3UTR CCA 90 bp | TGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCGCGGTGCATGGGGCCTaGCCCCACCAGCGGGCACTG | + |
Preference number: 2 (lower is better) Translates to: WLPALQEPGVLGTSPVPPAVHGA*PHQRAL Trigger: CAGTGCCCGCTGGTGGGGCCAGGCCCCATGCACCGC...GGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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3UTR-3UTR CCA 90 bp | TGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCGGTGACGGCGGTGCATaGGGCCTGGCCCCACCAGCG | + |
Preference number: 2 (lower is better) Translates to: WLPALQEPGVLGTSPVPPGDGGA*GLAPPA Trigger: CGCTGGTGGGGCCAGGCCCCATGCACCGCCGTCACC...GGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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3UTR-3UTR GCA 90 bp | GCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTCGGCGAATGCCCAGCTaGTGCAGCAGCGGTGGCTAC | + |
Preference number: 2 (lower is better) Translates to: AAVATSSAGTRGAGHEPCRRMPS*CSSGGY Trigger: GTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCG...ACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR-3UTR GCA 90 bp | GCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCAGGCCACCAACCCAGTaGAGCCCAGTGTGGCGGCAG | + |
Preference number: 2 (lower is better) Translates to: AVATSSAGTRGAGHEPCSRPPTQ*SPVWRQ Trigger: CTGCCGCCACACTGGGCTGCACTGGGTTGGTGGCCT...GGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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3UTR-3UTR CCA 90 bp | GCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCAGGAGCGGAGCTGGGTaGGGACCCAGGCTCACAGAA | + |
Preference number: 2 (lower is better) Translates to: AAAVATSSAGTRGAGHEPRSGAG*GPRLTE Trigger: TTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCTCCT...GGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR-3UTR GCA 90 bp | AGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCGAATGCCCAGCTGCTaGAGCAGCGGTGGCTACCAG | + |
Preference number: 2 (lower is better) Translates to: SGGYQLCRNQGCWARALFRMPSC*SSGGYQ Trigger: CTGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCG...GAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR-3UTR GCA 90 bp | AGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCAGCAAGGTCGGCGAATaGCCAGCTGCTGCAGCAGCG | + |
Preference number: 2 (lower is better) Translates to: SGGYQLCRNQGCWARALFSKVGE*PAAAAA Trigger: CGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCT...GAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR-3UTR CCA 90 bp | GCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCAGGAGCGGAGCTGGGTaGGGACCCAGGCTCACAGAA | + |
Preference number: 2 (lower is better) Translates to: ATSSAGTRGAGHEPCSSLRSGAG*GPRLTE Trigger: TTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCTCCT...GAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR-3UTR TCA 90 bp | GCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCCCTAGGAGGCCTAAATaGAAGATGGCTTGGAGTCTT | + |
Preference number: 2 (lower is better) Translates to: AVATSSAGTRGAGHEPCSPRRPK*KMAWSL Trigger: AAGACTCCAAGCCATCTTTCATTTAGGCCTCCTAGG...GGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR GCA 90 bp | GGCAGACCAGAAGTATTTTATTCGCAAGGGTCGGGAGTGGAGGTCGTAGGTGGGCGGCGAATGCCCAGCTaGTGCAGCAGCGGTGGCTAC | + |
Preference number: 2 (lower is better) Translates to: GRPEVFYSQGSGVEVVGGRRMPS*CSSGGY Trigger: GTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCG...CCCACCTACGACCTCCACTCCCGACCCTTGCGAATAAAATACTTCTGGTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR TCA 90 bp | CGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCTAGGAGGCCTAAATaGAAGATGGCTTGGAGTCTT | + |
Preference number: 2 (lower is better) Translates to: RWLPALQEPGVLGTSPVPPRRPK*KMAWSL Trigger: AAGACTCCAAGCCATCTTTCATTTAGGCCTCCTAGG...AGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR GCA 90 bp | CAGACCAGAAGTATTTTATTCGCAAGGGTCGGGAGTGGAGGTCGTAGGTGGGGACGGCGAATGCCCAGCTaGTGCAGCAGCGGTGGCTAC | + |
Preference number: 2 (lower is better) Translates to: QTRSILFARVGSGGRRWGRRMPS*CSSGGY Trigger: GTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCG...TCCCCACCTACGACCTCCACTCCCGACCCTTGCGAATAAAATACTTCTGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR GCA 90 bp | GAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCAGCAAGGTCGGCGAATaGCCAGCTGCTGCAGCAGCG | + |
Preference number: 2 (lower is better) Translates to: EVLLIHHYGNGMSLEIGGSKVGE*PAAAAA Trigger: CGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCT...GCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR CCA 90 bp | CTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCGGCCTAAATGAAAGATaGCTTGGAGTCTTAGGGTTC | + |
Preference number: 2 (lower is better) Translates to: LPALQEPGVLGTSPVPPSGLNER*LGVLGF Trigger: GAACCCTAAGACTCCAAGCCATCTTTCATTTAGGCC...GGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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3UTR-3UTR CCA 90 bp | ATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGAGGAGCGGAGCTGGGTaGGGACCCAGGCTCACAGAA | + |
Preference number: 2 (lower is better) Translates to: IHHYGNGMSLEIGGSCLWRSGAG*GPRLTE Trigger: TTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCTCCT...CCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR TCA 90 bp | TGTGTGCTGGCAGAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGCCTAGGAGGCCTAAATaGAAGATGGCTTGGAGTCTT | + |
Preference number: 2 (lower is better) Translates to: CVLAEVLLIHHYGNGMSLPRRPK*KMAWSL Trigger: AAGACTCCAAGCCATCTTTCATTTAGGCCTCCTAGG...CAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTCTGCCAGCACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR CCA 90 bp | CCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGCTGCTGATCCATCACTATaGGAATGGGATGTCCCTGGA | + |
Preference number: 2 (lower is better) Translates to: PSLWEWDVPGNRGLMLMAADPSL*EWDVPG Trigger: TCCAGGGACATCCCATTCCCATAGTGATGGATCAGC...AGCCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR TCA 90 bp | CCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGCTCCTAGGAGGCCTAAATaGAAGATGGCTTGGAGTCTT | + |
Preference number: 2 (lower is better) Translates to: PSLWEWDVPGNRGLMLMAPRRPK*KMAWSL Trigger: AAGACTCCAAGCCATCTTTCATTTAGGCCTCCTAGG...AGCCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR CCA 90 bp | TGTGTGCTGGCAGAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGCTTGTAACTGATGGCTaGGAGAGTGAAAAAGTGAAA | + |
Preference number: 2 (lower is better) Translates to: CVLAEVLLIHHYGNGMSLLVTDG*ESEKVK Trigger: TTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAG...CAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTCTGCCAGCACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR-3UTR CCA 90 bp | CTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTACTTGTAACTGATGGCTaGGAGAGTGAAAAAGTGAAA | + |
Preference number: 2 (lower is better) Translates to: LIHHYGNGMSLEIGGSCLLVTDG*ESEKVK Trigger: TTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAG...TAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR CCA 72 bp | GGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTaGCAGGCCTGGATCACAGGAGCGGAGCTGGGTGGG | + |
Preference number: 3 (lower is better) Translates to: GTSPVPPSPAAR*QAWITGAELGG Trigger: CCCACCCAGCTCCGCTCCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR CCA 72 bp | GGATCCTGGCAGGGAGCAGCAGGTGACGGCGGTGCATaGGGCCTGGCCCCACCAGCGGGCACTGGCCCACAG | + |
Preference number: 3 (lower is better) Translates to: GSWQGAAGDGGA*GLAPPAGTGPQ Trigger: CTGTGGGCCAGTGCCCGCTGGTGGGGCCAGGCCCCATGCACCGCCGTCACCTGCTGCTCCCTGCCAGGATCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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3UTR GCA 72 bp | AGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTaGTGGGCACGAGCCCTGTTCCTCCCTCCCCGGCCG | + |
Preference number: 3 (lower is better) Translates to: SSGGYQLCRNQG*WARALFLPPRP Trigger: CGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR CCA 72 bp | AGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTaGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCA | + |
Preference number: 3 (lower is better) Translates to: SGGYQLCRNQGC*ARALFLPPRPP Trigger: TGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR CCA 72 bp | GCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTaGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGC | + |
Preference number: 3 (lower is better) Translates to: ARSANAQLLQQR*LPALQEPGVLG Trigger: GCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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3UTR TCA 72 bp | GGGCGAAGGTGGCTCCCGGGAAACACCAGACTGGGGTaGGACCGCCGGTATAGGCCACCAACCCAGTGCAGC | + |
Preference number: 3 (lower is better) Translates to: GRRWLPGNTRLG*DRRYRPPTQCS Trigger: GCTGCACTGGGTTGGTGGCCTATACCGGCGGTCTCACCCCAGTCTGGTGTTTCCCGGGAGCCACCTTCGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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3UTR CCA 72 bp | TCAGGGGGCGAAGGTGGCTCCCGGGAAACACCAGACTaGGGTGAGACCGCCGGTATAGGCCACCAACCCAGT | + |
Preference number: 3 (lower is better) Translates to: SGGEGGSRETPD*GETAGIGHQPS Trigger: ACTGGGTTGGTGGCCTATACCGGCGGTCTCACCCCAGTCTGGTGTTTCCCGGGAGCCACCTTCGCCCCCTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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3UTR TCA 72 bp | TGTACACGGGGAAGGAGTTGCAGCAACCCCCAGGAGTaGGGCTGTCCGAAGCCAAAGACTCCGTGTGTGCTG | + |
Preference number: 3 (lower is better) Translates to: CTRGRSCSNPQE*GCPKPKTPCVL Trigger: CAGCACACACGGAGTCTTTGGCTTCGGACAGCCTCACTCCTGGGGGTTGCTGCAACTCCTTCCCCGTGTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR TCA 72 bp | GCTCCCTGGTCGCTCGACCTTCCTAGGAGGCCTAAATaGAAGATGGCTTGGAGTCTTAGGGTTCAGGGGGCG | + |
Preference number: 3 (lower is better) Translates to: APWSLDLPRRPK*KMAWSLRVQGA Trigger: CGCCCCCTGAACCCTAAGACTCCAAGCCATCTTTCATTTAGGCCTCCTAGGAAGGTCGAGCGACCAGGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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3UTR-3UTR CAA 90 bp | GAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCGCAGCTGTGGCTCCGTaGTTAGAGTGCAGACGTGTA | + |
Preference number: 3 (lower is better) Translates to: EVLLIHHYGNGMSLEIGGAAVAP*LECRRV Trigger: TACACGTCTGCACTCTAACAACGGAGCCACAGCTGC...GCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR CCA 72 bp | GTGTGTGCTGGCAGAGGTCTTGCTGATCCATCACTATaGGAATGGGATGTCCCTGGAAATAGGGGGCTCATG | + |
Preference number: 3 (lower is better) Translates to: VCAGRGLADPSL*EWDVPGNRGLM Trigger: CATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTCTGCCAGCACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR GCA 72 bp | TATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATaGTTATGGCTTGTAACTGATGGCTGGGAGAGTGAA | + |
Preference number: 3 (lower is better) Translates to: YGNGMSLEIGGS*LWLVTDGWESE Trigger: TTCACTCTCCCAGCCATCAGTTACAAGCCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR CCA 72 bp | ATAGGGGGCTCATGCTTATGGCTTGTAACTGATGGCTaGGAGAGTGAAAAAGTGAAATCGGATGAGCTGAGC | + |
Preference number: 3 (lower is better) Translates to: IGGSCLWLVTDG*ESEKVKSDELS Trigger: GCTCAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAAGCATGAGCCCCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR CCA 72 bp | AATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATaGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTG | + |
Preference number: 3 (lower is better) Translates to: NGMSLEIGGSCL*LVTDGWESEKV Trigger: CACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
||
3UTR CCA 72 bp | TACCGAGGAATGTCGAGTCTCAATGCATCTAAAACGTaGGTCCCGGAGTCTGTCAGTGAGTCAGATAACAAG | + |
Preference number: 3 (lower is better) Translates to: YRGMSSLNASKT*VPESVSESDNK Trigger: CTTGTTATCTGACTCACTGACAGACTCCGGGACCCACGTTTTAGATGCATTGAGACTCGACATTCCTCGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | TGGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCAGCGGTGCATGGGGCCTaGCCCCACCAGCGGGCACTG | + |
Preference number: 4 (lower is better) Translates to: WARALFLPPRPPGGRPGSAVHGA*PHQRAL Trigger: CAGTGCCCGCTGGTGGGGCCAGGCCCCATGCACCGC...TGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | TGGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCAGCAGGGAGCAGCAGGTaGCGGCGGTGCATGGGGCCT | + |
Preference number: 4 (lower is better) Translates to: WARALFLPPRPPGGRPGSAGSSR*RRCMGP Trigger: AGGCCCCATGCACCGCCGTCACCTGCTGCTCCCTGC...TGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 ENSMUST00000238982.2 |
||
CDS-3UTR GCA 90 bp | TGGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCAGGGTCCAGCACCAGCTaGTGGAGCTGCCTCAGCCGC | + |
Preference number: 4 (lower is better) Translates to: WARALFLPPRPPGGRPGSGSSTS*WSCLSR Trigger: GCGGCTGAGGCAGCTCCAGCAGCTGGTGCTGGACCC...TGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
||
CDS-3UTR GCA 90 bp | TGGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCAACTCTGGCCCGTAGCTaGCTGCCCCAGGCCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: WARALFLPPRPPGGRPGSTLARS*LPQALH Trigger: GTGGAGGGCCTGGGGCAGGCAGCTACGGGCCAGAGT...TGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
||
CDS-3UTR CCA 90 bp | GCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCGGTGACGGCGGTGCATaGGGCCTGGCCCCACCAGCG | + |
Preference number: 4 (lower is better) Translates to: AVATSSAGTRGAGHEPCSGDGGA*GLAPPA Trigger: CGCTGGTGGGGCCAGGCCCCATGCACCGCCGTCACC...GGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 ENSMUST00000238982.2 |
||
CDS-3UTR CCA 90 bp | GCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTGGTGACGGCGGTGCATaGGGCCTGGCCCCACCAGCG | + |
Preference number: 4 (lower is better) Translates to: AAVATSSAGTRGAGHEPCGDGGA*GLAPPA Trigger: CGCTGGTGGGGCCAGGCCCCATGCACCGCCGTCACC...ACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | GCTGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGCAGGGAGCAGCAGGTaGCGGCGGTGCATGGGGCCT | + |
Preference number: 4 (lower is better) Translates to: AAAAAVATSSAGTRGAGHAGSSR*RRCMGP Trigger: AGGCCCCATGCACCGCCGTCACCTGCTGCTCCCTGC...GTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCGGGTCCAGCACCAGCTaGTGGAGCTGCCTCAGCCGC | + |
Preference number: 4 (lower is better) Translates to: AAAVATSSAGTRGAGHEPGSSTS*WSCLSR Trigger: GCGGCTGAGGCAGCTCCAGCAGCTGGTGCTGGACCC...GGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | TGGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCAACAGGTAGTCCGGGGTaGCCACAGCCACCAGCGACC | + |
Preference number: 4 (lower is better) Translates to: WARALFLPPRPPGGRPGSTGSPG*PQPPAT Trigger: GGTCGCTGGTGGCTGTGGGCACCCCGGACTACCTGT...TGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | TGGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCAGCACCCAGCTCCTGGTaGACGCCCAGGAGAAGGTCG | + |
Preference number: 4 (lower is better) Translates to: WARALFLPPRPPGGRPGSAPSSW*TPRRRS Trigger: CGACCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGC...TGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | CGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTGCGGTGCATGGGGCCTaGCCCCACCAGCGGGCACTG | + |
Preference number: 4 (lower is better) Translates to: RWLPALQEPGVLGTSPVPAVHGA*PHQRAL Trigger: CAGTGCCCGCTGGTGGGGCCAGGCCCCATGCACCGC...AGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | GTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGAGCGGAGCTGTTGTCCTGGGCTAGGTaGGAGGCACCCAGCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: VPPSPAARWQAWITGAELLSWAR*EAPSSW Trigger: CCAGGAGCTGGGTGCCTCTCACCTAGCCCAGGACAA...CAGCTCCGCTCCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | CACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGTTGTCCTGGGCTAGGTaGGAGGCACCCAGCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: HEPCSSLPGRQVAGLDHRLSWAR*EAPSSW Trigger: CCAGGAGCTGGGTGCCTCTCACCTAGCCCAGGACAA...CCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCGGGTCCAGCACCAGCTaGTGGAGCTGCCTCAGCCGC | + |
Preference number: 4 (lower is better) Translates to: AVATSSAGTRGAGHEPCSGSSTS*WSCLSR Trigger: GCGGCTGAGGCAGCTCCAGCAGCTGGTGCTGGACCC...GGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | CACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGTCCAGCACCAGCTGCTaGAGCTGCCTCAGCCGCACT | + |
Preference number: 4 (lower is better) Translates to: HEPCSSLPGRQVAGLDHRSSTSC*SCLSRT Trigger: AGTGCGGCTGAGGCAGCTCCAGCAGCTGGTGCTGGA...CCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGAGCGGAGCTGCAGTCCCAGGAAGCCTaGGTCCAGCACCAGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: VPPSPAARWQAWITGAELQSQEA*VQHQLL Trigger: CAGCAGCTGGTGCTGGACCCAGGCTTCCTGGGACTG...CAGCTCCGCTCCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | AGCGGAGCTGGGTGGGGACCCAGGCTCACAGAAGTGTGGAGCGGAGCGGTGGGGGCACCCAGCTCCTGGTaGACGCCCAGGAGAAGGTCG | + |
Preference number: 4 (lower is better) Translates to: SGAGWGPRLTEVWSGAVGAPSSW*TPRRRS Trigger: CGACCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGC...CCCCACCGCTCCGCTCCACACTTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCGGGAAGGTGGATCCGTaGCCCGGGGACTGGGGACCC | + |
Preference number: 4 (lower is better) Translates to: ATSSAGTRGAGHEPCSSLGKVDP*PGDWGP Trigger: GGGTCCCCAGTCCCCGGGCCACGGATCCACCTTCCC...GAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | CACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGCAAAGTGCAGCTGTGTaGTCCAGCGCCGGTCCCCTT | + |
Preference number: 4 (lower is better) Translates to: HEPCSSLPGRQVAGLDHRQSAAV*SSAGPL Trigger: AAGGGGACCGGCGCTGGATCACACAGCTGCACTTTG...CCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | GTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGAGCGGAGCTGACAGCAGCCCACGAATaGGGTCCTGAGCTTCCTCGG | + |
Preference number: 4 (lower is better) Translates to: VPPSPAARWQAWITGAELTAAHE*GPELPR Trigger: CCGAGGAAGCTCAGGACCTCATTCGTGGGCTGCTGT...CAGCTCCGCTCCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CGGCAGCAGCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCGGATAGGCACCAGCTGCTGGAGCTaGCTCAGCCGCACTTCGGCT | + |
Preference number: 4 (lower is better) Translates to: RQQPEQRRTGAGNAPRIGTSCWS*LSRTSA Trigger: AGCCGAAGTGCGGCTGAGGCAGCTCCAGCAGCTGGT...GCCTATCCGAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGCTGCTGCCG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | CGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTGGGTCCAGCACCAGCTaGTGGAGCTGCCTCAGCCGC | + |
Preference number: 4 (lower is better) Translates to: RWLPALQEPGVLGTSPVPGSSTS*WSCLSR Trigger: GCGGCTGAGGCAGCTCCAGCAGCTGGTGCTGGACCC...AGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GACTGGGGTGAGACCGCCGGTATAGGCCACCAACCCAGTGCAGCCCAGTGTGGCACTCTGGCCCGTAGCTaGCTGCCCCAGGCCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: DWGETAGIGHQPSAAQCGTLARS*LPQALH Trigger: GTGGAGGGCCTGGGGCAGGCAGCTACGGGCCAGAGT...GCCACACTGGGCTGCACTGGGTTGGTGGCCTATACCGGCGGTCTCACCCCAGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | AGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCACTCTGGCCCGTAGCTaGCTGCCCCAGGCCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: SGGYQLCRNQGCWARALFTLARS*LPQALH Trigger: GTGGAGGGCCTGGGGCAGGCAGCTACGGGCCAGAGT...GAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCGGCGAACACGCCCAGTaGCCACCAGTCACACTCTGG | + |
Preference number: 4 (lower is better) Translates to: AAAVATSSAGTRGAGHEPGEHAQ*PPVTLW Trigger: CCAGAGTGTGACTGGTGGGCACTGGGCGTGTTCGCC...GGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGGGACACTGGGGGCTaGAAGTCAAGCCCTTGCAAG | + |
Preference number: 4 (lower is better) Translates to: GTSPVPPSPAARWQAWITGDTGG*KSSPCK Trigger: CTTGCAAGGGCTTGACTTGCAGCCCCCAGTGTCCCC...TGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GCTGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGCACCCAGCTCCTGGTaGACGCCCAGGAGAAGGTCG | + |
Preference number: 4 (lower is better) Translates to: AAAAAVATSSAGTRGAGHAPSSW*TPRRRS Trigger: CGACCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGC...GTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTGAGGCACCCAGCTCCTaGTGGACGCCCAGGAGAAGG | + |
Preference number: 4 (lower is better) Translates to: AAVATSSAGTRGAGHEPCEAPSS*WTPRRR Trigger: CCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGCCTC...ACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGCTGCAGCGTTACCGTaGTCTCTGCCTCAGCCACAG | + |
Preference number: 4 (lower is better) Translates to: GTSPVPPSPAARWQAWITAAALP*SLPQPQ Trigger: CTGTGGCTGAGGCAGAGACCACGGTAACGCTGCAGC...TGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | AGTGTGGCGGCAGCAGCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCGGGGATCTGCGGCTCCTaGGGCCTGCAGCATCTCCAT | + |
Preference number: 4 (lower is better) Translates to: SVAAAARAAANRSRQRASGICGS*GLQHLH Trigger: ATGGAGATGCTGCAGGCCCCAGGAGCCGCAGATCCC...CGAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGCTGCTGCCGCCACACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108473.10 |
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CDS-3UTR CCA 90 bp | AGCGGAGCTGGGTGGGGACCCAGGCTCACAGAAGTGTGGAGCGGAGCGGTGGGGGGCCATATGGGAAGGTaGATCCGTGGCCCGGGGACT | + |
Preference number: 4 (lower is better) Translates to: SGAGWGPRLTEVWSGAVGGHMGR*IRGPGT Trigger: AGTCCCCGGGCCACGGATCCACCTTCCCATATGGCC...CCCCACCGCTCCGCTCCACACTTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCT 68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | GCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTTGTCCTGGGCTAGGTaGGAGGCACCCAGCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: AAVATSSAGTRGAGHEPCLSWAR*EAPSSW Trigger: CCAGGAGCTGGGTGCCTCTCACCTAGCCCAGGACAA...ACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | GCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCACAGCAGCCCACGAATaGGGTCCTGAGCTTCCTCGG | + |
Preference number: 4 (lower is better) Translates to: AAAVATSSAGTRGAGHEPTAAHE*GPELPR Trigger: CCGAGGAAGCTCAGGACCTCATTCGTGGGCTGCTGT...GGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | TGGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCAAAGCCCTTGCAAGTCTaGCACAGGCAACTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: WARALFLPPRPPGGRPGSKPLQV*HRQLQG Trigger: GCCCTGCAGTTGCCTGTGTCAGACTTGCAAGGGCTT...TGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | AGCGGAGCTGGGTGGGGACCCAGGCTCACAGAAGTGTGGAGCGGAGCGGTGGGGTCAGGCTCTGCCGGGTaGGAACCTCTTCTTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: SGAGWGPRLTEVWSGAVGSGSAG*EPLLPG Trigger: CCCTGGAAGAAGAGGTTCTCACCCGGCAGAGCCTGA...CCCCACCGCTCCGCTCCACACTTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | TGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAACAGGTAGTCCGGGGTaGCCACAGCCACCAGCGACC | + |
Preference number: 4 (lower is better) Translates to: CCSSGGYQLCRNQGCWARTGSPG*PQPPAT Trigger: GGTCGCTGGTGGCTGTGGGCACCCCGGACTACCTGT...TCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | AGCGGAGCTGGGTGGGGACCCAGGCTCACAGAAGTGTGGAGCGGAGCGGTGGGGTCGCGGCTCAGGCTCTaGCGGGTGAGAACCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: SGAGWGPRLTEVWSGAVGSRLRL*RVRTSS Trigger: AGAAGAGGTTCTCACCCGGCAGAGCCTGAGCCGCGA...CCCCACCGCTCCGCTCCACACTTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCAGGCCACCAACCCAGTaGAGCCCAGTGTGGCGGCAG | + |
Preference number: 4 (lower is better) Translates to: LPALQEPGVLGTSPVPPSRPPTQ*SPVWRQ Trigger: CTGCCGCCACACTGGGCTGCACTGGGTTGGTGGCCT...GGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GCCCAGCTGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGTCCAGCACCAGCTGCTaGAGCTGCCTCAGCCGCACT | + |
Preference number: 4 (lower is better) Translates to: AQLLQQRWLPALQEPGVLSSTSC*SCLSRT Trigger: AGTGCGGCTGAGGCAGCTCCAGCAGCTGGTGCTGGA...CAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGCTGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | CAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTTCCAGCACCAGCTGCTaGAGCTGCCTCAGCCGCACT | + |
Preference number: 4 (lower is better) Translates to: QQRWLPALQEPGVLGTSPSSTSC*SCLSRT Trigger: AGTGCGGCTGAGGCAGCTCCAGCAGCTGGTGCTGGA...AGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | CAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTCAGTCCCAGGAAGCCTaGGTCCAGCACCAGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: QQRWLPALQEPGVLGTSPQSQEA*VQHQLL Trigger: CAGCAGCTGGTGCTGGACCCAGGCTTCCTGGGACTG...AGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GACTGGGGTGAGACCGCCGGTATAGGCCACCAACCCAGTGCAGCCCAGTGTGGCGCACCCAGCTCCTGGTaGACGCCCAGGAGAAGGTCG | + |
Preference number: 4 (lower is better) Translates to: DWGETAGIGHQPSAAQCGAPSSW*TPRRRS Trigger: CGACCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGC...GCCACACTGGGCTGCACTGGGTTGGTGGCCTATACCGGCGGTCTCACCCCAGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | CAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTGAGGCACCCAGCTCCTaGTGGACGCCCAGGAGAAGG | + |
Preference number: 4 (lower is better) Translates to: QRWLPALQEPGVLGTSPVEAPSS*WTPRRR Trigger: CCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGCCTC...AACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | CTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCGAGGCACCCAGCTCCTaGTGGACGCCCAGGAGAAGG | + |
Preference number: 4 (lower is better) Translates to: LPALQEPGVLGTSPVPPSEAPSS*WTPRRR Trigger: CCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGCCTC...GGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | TGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGAGGCACCCAGCTCCTaGTGGACGCCCAGGAGAAGG | + |
Preference number: 4 (lower is better) Translates to: CCSSGGYQLCRNQGCWAREAPSS*WTPRRR Trigger: CCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGCCTC...TCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | TGGGCACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCATCTTCCAGGGCTTCCTaGAGCTGCTGCAGCGTTACC | + |
Preference number: 4 (lower is better) Translates to: WARALFLPPRPPGGRPGSSSRAS*SCCSVT Trigger: GGTAACGCTGCAGCAGCTCCAGGAAGCCCTGGAAGA...TGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | CGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTTTGTCCTGGGCTAGGTaGGAGGCACCCAGCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: RWLPALQEPGVLGTSPVPLSWAR*EAPSSW Trigger: CCAGGAGCTGGGTGCCTCTCACCTAGCCCAGGACAA...AGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | GACTGGGGTGAGACCGCCGGTATAGGCCACCAACCCAGTGCAGCCCAGTGTGGCTTGTCCTGGGCTAGGTaGGAGGCACCCAGCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: DWGETAGIGHQPSAAQCGLSWAR*EAPSSW Trigger: CCAGGAGCTGGGTGCCTCTCACCTAGCCCAGGACAA...GCCACACTGGGCTGCACTGGGTTGGTGGCCTATACCGGCGGTCTCACCCCAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | GTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGAGCGGAGCTGCGGAGTCTATGGCCATaGCAATCTCGGCCAGGTAGA | + |
Preference number: 4 (lower is better) Translates to: VPPSPAARWQAWITGAELRSLWP*QSRPGR Trigger: TCTACCTGGCCGAGATTGTCATGGCCATAGACTCCG...CAGCTCCGCTCCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | CACGAGCCCTGTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGCGGAGTCTATGGCCATaGCAATCTCGGCCAGGTAGA | + |
Preference number: 4 (lower is better) Translates to: HEPCSSLPGRQVAGLDHRRSLWP*QSRPGR Trigger: TCTACCTGGCCGAGATTGTCATGGCCATAGACTCCG...CCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAACAGGGCTCGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | GCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCCATCAGGCTGCAGTTTaGGGCAGGAGCCGAAGTCTG | + |
Preference number: 4 (lower is better) Translates to: AAAVATSSAGTRGAGHEPHQAAV*GRSRSL Trigger: CAGACTTCGGCTCCTGCCTCAAACTGCAGCCTGATG...GGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | CAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCGCTCACCATGGCAGTaGGCCGGTCCTCCACCACAT | + |
Preference number: 4 (lower is better) Translates to: QRWLPALQEPGVLGTSPVRSPWQ*AGPPPH Trigger: ATGTGGTGGAGGACCGGCTCACTGCCATGGTGAGCG...AACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 |
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CDS-3UTR TCA 90 bp | GCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCGGATAGGCCAGGCCTATCAGGCTCTGCCGGGTaGGAACCTCTTCTTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: ARAAANRSRQRASDRPGLSGSAG*EPLLPG Trigger: CCCTGGAAGAAGAGGTTCTCACCCGGCAGAGCCTGA...TAGGCCTGGCCTATCCGAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | CAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTTCAGGCTCTGCCGGGTaGGAACCTCTTCTTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: QQRWLPALQEPGVLGTSPSGSAG*EPLLPG Trigger: CCCTGGAAGAAGAGGTTCTCACCCGGCAGAGCCTGA...AGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTACCAGCTGCTGGAGCTaGCTCAGCCGCACTTCGGCT | + |
Preference number: 4 (lower is better) Translates to: RWLPALQEPGVLGTSPVPTSCWS*LSRTSA Trigger: AGCCGAAGTGCGGCTGAGGCAGCTCCAGCAGCTGGT...AGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | TGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAACCAGCTGCTGGAGCTaGCTCAGCCGCACTTCGGCT | + |
Preference number: 4 (lower is better) Translates to: CCSSGGYQLCRNQGCWARTSCWS*LSRTSA Trigger: AGCCGAAGTGCGGCTGAGGCAGCTCCAGCAGCTGGT...TCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | TGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCACCAGCTGCTGGAGCTaGCTCAGCCGCACTTCGGCT | + |
Preference number: 4 (lower is better) Translates to: WLPALQEPGVLGTSPVPPTSCWS*LSRTSA Trigger: AGCCGAAGTGCGGCTGAGGCAGCTCCAGCAGCTGGT...GGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CGGCAGCAGCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCGGATAGGCTCTGCCAGGCGAATGTaGCCACATCGGTCCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: RQQPEQRRTGAGNAPRIGSARRM*PHRSSR Trigger: TCTGCTGGACCGATGTGGGCACATTCGCCTGGCAGA...GCCTATCCGAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGCTGCTGCCG 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | CAGTGTGGCGGCAGCAGCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCCCTCCACCAACGGCCTaGAGAATCTCAGGAGACAGG | + |
Preference number: 4 (lower is better) Translates to: QCGGSSQSSGEQEQATRLPPPTA*RISGDR Trigger: CCTGTCTCCTGAGATTCTGCAGGCCGTTGGTGGAGG...GAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGCTGCTGCCGCCACACTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | AGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCTCCAGCACCAGCTGCTaGAGCTGCCTCAGCCGCACT | + |
Preference number: 4 (lower is better) Translates to: SGGYQLCRNQGCWARALFSSTSC*SCLSRT Trigger: AGTGCGGCTGAGGCAGCTCCAGCAGCTGGTGCTGGA...GAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | TGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGATCCAGCACCAGCTGCTaGAGCTGCCTCAGCCGCACT | + |
Preference number: 4 (lower is better) Translates to: CCSSGGYQLCRNQGCWARSSTSC*SCLSRT Trigger: AGTGCGGCTGAGGCAGCTCCAGCAGCTGGTGCTGGA...TCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCAGTCCCAGGAAGCCTaGGTCCAGCACCAGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: ATSSAGTRGAGHEPCSSLQSQEA*VQHQLL Trigger: CAGCAGCTGGTGCTGGACCCAGGCTTCCTGGGACTG...GAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | AGCGGAGCTGGGTGGGGACCCAGGCTCACAGAAGTGTGGAGCGGAGCGGTGGGGCATATGTCTCGGCTGTaGAGTCCGCGTAGAAGGGGG | + |
Preference number: 4 (lower is better) Translates to: SGAGWGPRLTEVWSGAVGHMSRL*SPRRRG Trigger: CCCCCTTCTACGCGGACTCCACAGCCGAGACATATG...CCCCACCGCTCCGCTCCACACTTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCGGATAGGCCAGGCCTAGCTGCAGCGTTACCGTaGTCTCTGCCTCAGCCACAG | + |
Preference number: 4 (lower is better) Translates to: ARAAANRSRQRASDRPGLAAALP*SLPQPQ Trigger: CTGTGGCTGAGGCAGAGACCACGGTAACGCTGCAGC...TAGGCCTGGCCTATCCGAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | CAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCAAAGTGCAGCTGTGTaGTCCAGCGCCGGTCCCCTT | + |
Preference number: 4 (lower is better) Translates to: QRWLPALQEPGVLGTSPVQSAAV*SSAGPL Trigger: AAGGGGACCGGCGCTGGATCACACAGCTGCACTTTG...AACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | TGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGACAAAGTGCAGCTGTGTaGTCCAGCGCCGGTCCCCTT | + |
Preference number: 4 (lower is better) Translates to: CCSSGGYQLCRNQGCWARQSAAV*SSAGPL Trigger: AAGGGGACCGGCGCTGGATCACACAGCTGCACTTTG...TCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | CAGTGTGGCGGCAGCAGCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCCGGAGTCTATGGCCATaGCAATCTCGGCCAGGTAGA | + |
Preference number: 4 (lower is better) Translates to: QCGGSSQSSGEQEQATRLRSLWP*QSRPGR Trigger: TCTACCTGGCCGAGATTGTCATGGCCATAGACTCCG...GAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGCTGCTGCCGCCACACTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | TGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCACAGCAGCCCACGAATaGGGTCCTGAGCTTCCTCGG | + |
Preference number: 4 (lower is better) Translates to: WLPALQEPGVLGTSPVPPTAAHE*GPELPR Trigger: CCGAGGAAGCTCAGGACCTCATTCGTGGGCTGCTGT...GGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | GCCCAGCTGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGAAGCCCTTGCAAGTCTaGCACAGGCAACTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: AQLLQQRWLPALQEPGVLKPLQV*HRQLQG Trigger: GCCCTGCAGTTGCCTGTGTCAGACTTGCAAGGGCTT...CAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | TGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCAGGCTCTGCCGGGTaGGAACCTCTTCTTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: WLPALQEPGVLGTSPVPPSGSAG*EPLLPG Trigger: CCCTGGAAGAAGAGGTTCTCACCCGGCAGAGCCTGA...GGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | AGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCTCAGGCTCTGCCGGGTaGGAACCTCTTCTTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: SGGYQLCRNQGCWARALFSGSAG*EPLLPG Trigger: CCCTGGAAGAAGAGGTTCTCACCCGGCAGAGCCTGA...GAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GCCCAGCTGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGTCTGCCAGGCGAATGTaGCCACATCGGTCCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: AQLLQQRWLPALQEPGVLSARRM*PHRSSR Trigger: TCTGCTGGACCGATGTGGGCACATTCGCCTGGCAGA...CAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCACCATTCCATCAGGCTaGAGTTTGAGGCAGGAGCCG | + |
Preference number: 4 (lower is better) Translates to: AAAVATSSAGTRGAGHEPTIPSG*SLRQEP Trigger: CGGCTCCTGCCTCAAACTGCAGCCTGATGGAATGGT...GGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GCTGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACCCTCCACCAACGGCCTaGAGAATCTCAGGAGACAGG | + |
Preference number: 4 (lower is better) Translates to: AAAAAVATSSAGTRGAGHPPPTA*RISGDR Trigger: CCTGTCTCCTGAGATTCTGCAGGCCGTTGGTGGAGG...GTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CTGAGTAAAGCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTGGCTACCAACTCTGGCCCGTAGCTaGCTGCCCCAGGCCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: LSKARSANAQLLQQRWLPTLARS*LPQALH Trigger: GTGGAGGGCCTGGGGCAGGCAGCTACGGGCCAGAGT...TGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | AGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCGGGGACACTGGGGGCTaGAAGTCAAGCCCTTGCAAG | + |
Preference number: 4 (lower is better) Translates to: SGGYQLCRNQGCWARALFGDTGG*KSSPCK Trigger: CTTGCAAGGGCTTGACTTGCAGCCCCCAGTGTCCCC...GAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | TGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCGCGGCTCAGGCTCTaGCGGGTGAGAACCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: WLPALQEPGVLGTSPVPPSRLRL*RVRTSS Trigger: AGAAGAGGTTCTCACCCGGCAGAGCCTGAGCCGCGA...GGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTTCGCGGCTCAGGCTCTaGCGGGTGAGAACCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: RWLPALQEPGVLGTSPVPSRLRL*RVRTSS Trigger: AGAAGAGGTTCTCACCCGGCAGAGCCTGAGCCGCGA...AGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTCATATGTCTCGGCTGTaGAGTCCGCGTAGAAGGGGG | + |
Preference number: 4 (lower is better) Translates to: AAVATSSAGTRGAGHEPCHMSRL*SPRRRG Trigger: CCCCCTTCTACGCGGACTCCACAGCCGAGACATATG...ACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | TGGCGGCAGCAGCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCGGATATCTTCCAGGGCTTCCTaGAGCTGCTGCAGCGTTACC | + |
Preference number: 4 (lower is better) Translates to: WRQQPEQRRTGAGNAPRISSRAS*SCCSVT Trigger: GGTAACGCTGCAGCAGCTCCAGGAAGCCCTGGAAGA...TATCCGAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGCTGCTGCCGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | GCCCAGCTGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGTGGAGAAGTTCTGGTTaGCGGTCCGGATGGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: AQLLQQRWLPALQEPGVLWRSSG*RSGWPP Trigger: TGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCA...CAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGCTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | AGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCATCAGGCTGCAGTTTaGGGCAGGAGCCGAAGTCTG | + |
Preference number: 4 (lower is better) Translates to: SGGYQLCRNQGCWARALFHQAAV*GRSRSL Trigger: CAGACTTCGGCTCCTGCCTCAAACTGCAGCCTGATG...GAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | TGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAAAGCCCTTGCAAGTCTaGCACAGGCAACTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: CCSSGGYQLCRNQGCWARKPLQV*HRQLQG Trigger: GCCCTGCAGTTGCCTGTGTCAGACTTGCAAGGGCTT...TCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTTCCGCTCCCCAAACTTaGTCAGCAGCGTTAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: QQRWLPALQEPGVLGTSPSAPQT*SAALAG Trigger: ACCTGCTAACGCTGCTGAGCAAGTTTGGGGAGCGGA...AGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCTCTGCCAGGCGAATGTaGCCACATCGGTCCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: LPALQEPGVLGTSPVPPSSARRM*PHRSSR Trigger: TCTGCTGGACCGATGTGGGCACATTCGCCTGGCAGA...GGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTACCATTCCATCAGGCTaGAGTTTGAGGCAGGAGCCG | + |
Preference number: 4 (lower is better) Translates to: QQRWLPALQEPGVLGTSPTIPSG*SLRQEP Trigger: CGGCTCCTGCCTCAAACTGCAGCCTGATGGAATGGT...AGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTACCATTCCATCAGGCTaGAGTTTGAGGCAGGAGCCG | + |
Preference number: 4 (lower is better) Translates to: AAVATSSAGTRGAGHEPCTIPSG*SLRQEP Trigger: CGGCTCCTGCCTCAAACTGCAGCCTGATGGAATGGT...ACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CTGAGTAAAGCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTGGCTACCAACAGGTAGTCCGGGGTaGCCACAGCCACCAGCGACC | + |
Preference number: 4 (lower is better) Translates to: LSKARSANAQLLQQRWLPTGSPG*PQPPAT Trigger: GGTCGCTGGTGGCTGTGGGCACCCCGGACTACCTGT...TGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | CTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCTCTTCCAGGGCTTCCTaGAGCTGCTGCAGCGTTACC | + |
Preference number: 4 (lower is better) Translates to: LPALQEPGVLGTSPVPPSSSRAS*SCCSVT Trigger: GGTAACGCTGCAGCAGCTCCAGGAAGCCCTGGAAGA...GGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | TGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGATCTTCCAGGGCTTCCTaGAGCTGCTGCAGCGTTACC | + |
Preference number: 4 (lower is better) Translates to: CCSSGGYQLCRNQGCWARSSRAS*SCCSVT Trigger: GGTAACGCTGCAGCAGCTCCAGGAAGCCCTGGAAGA...TCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | TGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCTTCCAGGGCTTCCTaGAGCTGCTGCAGCGTTACC | + |
Preference number: 4 (lower is better) Translates to: WLPALQEPGVLGTSPVPPSSRAS*SCCSVT Trigger: GGTAACGCTGCAGCAGCTCCAGGAAGCCCTGGAAGA...GGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | AGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCTGGAGAAGTTCTGGTTaGCGGTCCGGATGGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: SGGYQLCRNQGCWARALFWRSSG*RSGWPP Trigger: TGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCA...GAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | GCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCGGAGTCTATGGCCATaGCAATCTCGGCCAGGTAGA | + |
Preference number: 4 (lower is better) Translates to: ATSSAGTRGAGHEPCSSLRSLWP*QSRPGR Trigger: TCTACCTGGCCGAGATTGTCATGGCCATAGACTCCG...GAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | CTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCCGGAGTCTATGGCCATaGCAATCTCGGCCAGGTAGA | + |
Preference number: 4 (lower is better) Translates to: LPALQEPGVLGTSPVPPSRSLWP*QSRPGR Trigger: TCTACCTGGCCGAGATTGTCATGGCCATAGACTCCG...GGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGAGCGGAGCTGTCAAAATCATCCCTCTaGAGTCGGACCTCCTTAAGC | + |
Preference number: 4 (lower is better) Translates to: VPPSPAARWQAWITGAELSKSSL*SRTSLS Trigger: GCTTAAGGAGGTCCGACTGCAGAGGGATGATTTTGA...CAGCTCCGCTCCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCTCCGCTCCCCAAACTTaGTCAGCAGCGTTAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: ATSSAGTRGAGHEPCSSLSAPQT*SAALAG Trigger: ACCTGCTAACGCTGCTGAGCAAGTTTGGGGAGCGGA...GAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | TGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAACCATTCCATCAGGCTaGAGTTTGAGGCAGGAGCCG | + |
Preference number: 4 (lower is better) Translates to: CCSSGGYQLCRNQGCWARTIPSG*SLRQEP Trigger: CGGCTCCTGCCTCAAACTGCAGCCTGATGGAATGGT...TCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CTGAGTAAAGCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTGGCTACCAGGCGAACACGCCCAGTaGCCACCAGTCACACTCTGG | + |
Preference number: 4 (lower is better) Translates to: LSKARSANAQLLQQRWLPGEHAQ*PPVTLW Trigger: CCAGAGTGTGACTGGTGGGCACTGGGCGTGTTCGCC...TGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTCTGACACAGGCAACTaGAGGGCCTCTAGTTCCATA | + |
Preference number: 4 (lower is better) Translates to: AAAVATSSAGTRGAGHEPSDTGN*RASSSI Trigger: TATGGAACTAGAGGCCCTGCAGTTGCCTGTGTCAGA...GGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CAGTGTGGCGGCAGCAGCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCTGCAAGTCAAGCCCTTaGAAGTCTGACACAGGCAAC | + |
Preference number: 4 (lower is better) Translates to: QCGGSSQSSGEQEQATRLCKSSP*KSDTGN Trigger: GTTGCCTGTGTCAGACTTGCAAGGGCTTGACTTGCA...GAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGCTGCTGCCGCCACACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | GCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCTGTAGCTGCCGAACATaGGCCTCCAGGTCTCGGTTT | + |
Preference number: 4 (lower is better) Translates to: ATSSAGTRGAGHEPCSSLCSCRT*ASRSRF Trigger: AAACCGAGACCTGGAGGCGCATGTTCGGCAGCTACA...GAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GCTGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACAATTGCATGTGTCCGTaGCACCCTCGAAGTCTGGTG | + |
Preference number: 4 (lower is better) Translates to: AAAAAVATSSAGTRGAGHNCMCP*HPRSLV Trigger: CACCAGACTTCGAGGGTGCCACGGACACATGCAATT...GTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | TGTGTGCTGGCAGAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGCGGTGCATGGGGCCTaGCCCCACCAGCGGGCACTG | + |
Preference number: 4 (lower is better) Translates to: CVLAEVLLIHHYGNGMSLAVHGA*PHQRAL Trigger: CAGTGCCCGCTGGTGGGGCCAGGCCCCATGCACCGC...CAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTCTGCCAGCACACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 |
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CDS-3UTR CCA 90 bp | CTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCAATTGCATGTGTCCGTaGCACCCTCGAAGTCTGCCC | + |
Preference number: 4 (lower is better) Translates to: LPALQEPGVLGTSPVPPSNCMCP*HPRSLP Trigger: GGGCAGACTTCGAGGGTGCCACGGACACATGCAATT...GGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108474.2 |
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CDS-3UTR CCA 90 bp | CTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCATTTGGCGAGAAGCATaGGAAGGTGGATCCGTGGCC | + |
Preference number: 4 (lower is better) Translates to: LPALQEPGVLGTSPVPPSIWREA*EGGSVA Trigger: GGCCACGGATCCACCTTCCCATGCTTCTCGCCAAAT...GGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | GCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTGCAAGTCAAGCCCTTaGAAGTCTGACACAGGCAAC | + |
Preference number: 4 (lower is better) Translates to: AAVATSSAGTRGAGHEPCCKSSP*KSDTGN Trigger: GTTGCCTGTGTCAGACTTGCAAGGGCTTGACTTGCA...ACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CTGAGTAAAGCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTGGCTACCAGGGGACACTGGGGGCTaGAAGTCAAGCCCTTGCAAG | + |
Preference number: 4 (lower is better) Translates to: LSKARSANAQLLQQRWLPGDTGG*KSSPCK Trigger: CTTGCAAGGGCTTGACTTGCAGCCCCCAGTGTCCCC...TGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CTGAGTAAAGCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTGGCTACCATCGCGGCTCAGGCTCTaGCGGGTGAGAACCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: LSKARSANAQLLQQRWLPSRLRL*RVRTSS Trigger: AGAAGAGGTTCTCACCCGGCAGAGCCTGAGCCGCGA...TGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GTTCCTCCCTCCCCGGCCGCCAGGTGGCAGGCCTGGATCACAGGAGCGGAGCTGCAGCAGAATGTTATCTaGTTTGATGTCCCTGTGCAC | + |
Preference number: 4 (lower is better) Translates to: VPPSPAARWQAWITGAELQQNVI*FDVPVH Trigger: GTGCACAGGGACATCAAACCAGATAACATTCTGCTG...CAGCTCCGCTCCTGTGATCCAGGCCTGCCACCTGGCGGCCGGGGAGGGAGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | TGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAAATTGCATGTGTCCGTaGCACCCTCGAAGTCTGGTG | + |
Preference number: 4 (lower is better) Translates to: CCSSGGYQLCRNQGCWARNCMCP*HPRSLV Trigger: CACCAGACTTCGAGGGTGCCACGGACACATGCAATT...TCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCGGGAAGGTGGATCCGTaGCCCGGGGACTGGGGACCC | + |
Preference number: 4 (lower is better) Translates to: EVLLIHHYGNGMSLEIGGGKVDP*PGDWGP Trigger: GGGTCCCCAGTCCCCGGGCCACGGATCCACCTTCCC...GCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | ACCGAGGAATGTCGAGTCTCAATGCATCTAAAACGTGGGTCCCGGAGTCTGTCAGGTGACGGCGGTGCATaGGGCCTGGCCCCACCAGCG | + |
Preference number: 4 (lower is better) Translates to: TEECRVSMHLKRGSRSLSGDGGA*GLAPPA Trigger: CGCTGGTGGGGCCAGGCCCCATGCACCGCCGTCACC...TGACAGACTCCGGGACCCACGTTTTAGATGCATTGAGACTCGACATTCCTCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 |
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CDS-3UTR TCA 90 bp | GCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCGAATGTTATCTGGTTTaGTGTCCCTGTGCACGTAGC | + |
Preference number: 4 (lower is better) Translates to: AVATSSAGTRGAGHEPCSECYLV*CPCARS Trigger: GCTACGTGCACAGGGACATCAAACCAGATAACATTC...GGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | ATGGCTTGGAGTCTTAGGGTTCAGGGGGCGAAGGTGGCTCCCGGGAAACACCAGCATCAGGCTGCAGTTTaGGGCAGGAGCCGAAGTCTG | + |
Preference number: 4 (lower is better) Translates to: MAWSLRVQGAKVAPGKHQHQAAV*GRSRSL Trigger: CAGACTTCGGCTCCTGCCTCAAACTGCAGCCTGATG...CTGGTGTTTCCCGGGAGCCACCTTCGCCCCCTGAACCCTAAGACTCCAAGCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | CCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGCTGCAGGGAGCAGCAGGTaGCGGCGGTGCATGGGGCCT | + |
Preference number: 4 (lower is better) Translates to: PSLWEWDVPGNRGLMLMAAGSSR*RRCMGP Trigger: AGGCCCCATGCACCGCCGTCACCTGCTGCTCCCTGC...AGCCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 |
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CDS-3UTR GCA 90 bp | CAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTTCAAAATCATCCCTCTaGAGTCGGACCTCCTTAAGC | + |
Preference number: 4 (lower is better) Translates to: QQRWLPALQEPGVLGTSPSKSSL*SRTSLS Trigger: GCTTAAGGAGGTCCGACTGCAGAGGGATGATTTTGA...AGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CTGAGTAAAGCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTGGCTACCACCTCCACCAACGGCCTaGAGAATCTCAGGAGACAGG | + |
Preference number: 4 (lower is better) Translates to: LSKARSANAQLLQQRWLPPPPTA*RISGDR Trigger: CCTGTCTCCTGAGATTCTGCAGGCCGTTGGTGGAGG...TGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCTCTGACACAGGCAACTaGAGGGCCTCTAGTTCCATA | + |
Preference number: 4 (lower is better) Translates to: ATSSAGTRGAGHEPCSSLSDTGN*RASSSI Trigger: TATGGAACTAGAGGCCCTGCAGTTGCCTGTGTCAGA...GAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTTCTGACACAGGCAACTaGAGGGCCTCTAGTTCCATA | + |
Preference number: 4 (lower is better) Translates to: RWLPALQEPGVLGTSPVPSDTGN*RASSSI Trigger: TATGGAACTAGAGGCCCTGCAGTTGCCTGTGTCAGA...AGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | CTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCTGCAAGTCAAGCCCTTaGAAGTCTGACACAGGCAAC | + |
Preference number: 4 (lower is better) Translates to: LPALQEPGVLGTSPVPPSCKSSP*KSDTGN Trigger: GTTGCCTGTGTCAGACTTGCAAGGGCTTGACTTGCA...GGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | CGGCAGCAGCCAGAGCAGCGGCGAACAGGAGCAGGCAACGCGCCTCGGATAGGCTTCATGGCATACACTTaGCCCGTCTGTTTCATCTTC | + |
Preference number: 4 (lower is better) Translates to: RQQPEQRRTGAGNAPRIGFMAYT*PVCFIF Trigger: GAAGATGAAACAGACGGGCCAAGTGTATGCCATGAA...GCCTATCCGAGGCGCGTTGCCTGCTCCTGTTCGCCGCTGCTCTGGCTGCTGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | AGCGGAGCTGGGTGGGGACCCAGGCTCACAGAAGTGTGGAGCGGAGCGGTGGGGAAGAAAGGATGTTTCTaGAAATCACCTGCCCCACCT | + |
Preference number: 4 (lower is better) Translates to: SGAGWGPRLTEVWSGAVGKKGCF*KSPAPP Trigger: AGGTGGGGCAGGTGATTTCCAGAAACATCCTTTCTT...CCCCACCGCTCCGCTCCACACTTCTGTGAGCCTGGGTCCCCACCCAGCTCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | CTGAGTAAAGCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTGGCTACCATGGAGAAGTTCTGGTTaGCGGTCCGGATGGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: LSKARSANAQLLQQRWLPWRSSG*RSGWPP Trigger: TGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCA...TGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCAGGGAAGGTGGATCCGTaGCCCGGGGACTGGGGACCC | + |
Preference number: 4 (lower is better) Translates to: VLLIHHYGNGMSLEIGGSGKVDP*PGDWGP Trigger: GGGTCCCCAGTCCCCGGGCCACGGATCCACCTTCCC...TGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | GCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCGAATGTTATCTGGTTTaGTGTCCCTGTGCACGTAGC | + |
Preference number: 4 (lower is better) Translates to: ATSSAGTRGAGHEPCSSLECYLV*CPCARS Trigger: GCTACGTGCACAGGGACATCAAACCAGATAACATTC...GAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | CAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTGAATGTTATCTGGTTTaGTGTCCCTGTGCACGTAGC | + |
Preference number: 4 (lower is better) Translates to: QRWLPALQEPGVLGTSPVECYLV*CPCARS Trigger: GCTACGTGCACAGGGACATCAAACCAGATAACATTC...AACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GGCAGACCAGAAGTATTTTATTCGCAAGGGTCGGGAGTGGAGGTCGTAGGTGGGCAGTCCCAGGAAGCCTaGGTCCAGCACCAGCTGCTG | + |
Preference number: 4 (lower is better) Translates to: GRPEVFYSQGSGVEVVGGQSQEA*VQHQLL Trigger: CAGCAGCTGGTGCTGGACCCAGGCTTCCTGGGACTG...CCCACCTACGACCTCCACTCCCGACCCTTGCGAATAAAATACTTCTGGTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | TGTGTGCTGGCAGAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGCACCCAGCTCCTGGTaGACGCCCAGGAGAAGGTCG | + |
Preference number: 4 (lower is better) Translates to: CVLAEVLLIHHYGNGMSLAPSSW*TPRRRS Trigger: CGACCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGC...CAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTCTGCCAGCACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | GCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTTCATGGCATACACTTaGCCCGTCTGTTTCATCTTC | + |
Preference number: 4 (lower is better) Translates to: AAVATSSAGTRGAGHEPCFMAYT*PVCFIF Trigger: GAAGATGAAACAGACGGGCCAAGTGTATGCCATGAA...ACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTCAGCAGAATGTTATCTaGTTTGATGTCCCTGTGCAC | + |
Preference number: 4 (lower is better) Translates to: AAVATSSAGTRGAGHEPCQQNVI*FDVPVH Trigger: GTGCACAGGGACATCAAACCAGATAACATTCTGCTG...ACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GCTGCTGCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACAAGAAAGGATGTTTCTaGAAATCACCTGCCCCACCT | + |
Preference number: 4 (lower is better) Translates to: AAAAAVATSSAGTRGAGHKKGCF*KSPAPP Trigger: AGGTGGGGCAGGTGATTTCCAGAAACATCCTTTCTT...GTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGCAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR GCA 90 bp | GAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCACCAGCTGCTGGAGCTaGCTCAGCCGCACTTCGGCT | + |
Preference number: 4 (lower is better) Translates to: EVLLIHHYGNGMSLEIGGTSCWS*LSRTSA Trigger: AGCCGAAGTGCGGCTGAGGCAGCTCCAGCAGCTGGT...GCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | CTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCCCTCCTTCATGGCATACACTTaGCCCGTCTGTTTCATCTTC | + |
Preference number: 4 (lower is better) Translates to: LPALQEPGVLGTSPVPPSFMAYT*PVCFIF Trigger: GAAGATGAAACAGACGGGCCAAGTGTATGCCATGAA...GGAGGGAGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR TCA 90 bp | CAGACCAGAAGTATTTTATTCGCAAGGGTCGGGAGTGGAGGTCGTAGGTGGGGAACAGCAGCCCACGAATaGGGTCCTGAGCTTCCTCGG | + |
Preference number: 4 (lower is better) Translates to: QTRSILFARVGSGGRRWGTAAHE*GPELPR Trigger: CCGAGGAAGCTCAGGACCTCATTCGTGGGCTGCTGT...TCCCCACCTACGACCTCCACTCCCGACCCTTGCGAATAAAATACTTCTGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | ACCGAGGAATGTCGAGTCTCAATGCATCTAAAACGTGGGTCCCGGAGTCTGTCACGCTCACCATGGCAGTaGGCCGGTCCTCCACCACAT | + |
Preference number: 4 (lower is better) Translates to: TEECRVSMHLKRGSRSLSRSPWQ*AGPPPH Trigger: ATGTGGTGGAGGACCGGCTCACTGCCATGGTGAGCG...TGACAGACTCCGGGACCCACGTTTTAGATGCATTGAGACTCGACATTCCTCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 |
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CDS-3UTR GCA 90 bp | ATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGACAGGTAGTCCGGGGTaGCCACAGCCACCAGCGACC | + |
Preference number: 4 (lower is better) Translates to: IHHYGNGMSLEIGGSCLWTGSPG*PQPPAT Trigger: GGTCGCTGGTGGCTGTGGGCACCCCGGACTACCTGT...CCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | ATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGAGGCCACCAACCCAGTaGAGCCCAGTGTGGCGGCAG | + |
Preference number: 4 (lower is better) Translates to: IHHYGNGMSLEIGGSCLWRPPTQ*SPVWRQ Trigger: CTGCCGCCACACTGGGCTGCACTGGGTTGGTGGCCT...CCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 |
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CDS-3UTR CCA 90 bp | ATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGGAGGCACCCAGCTCCTaGTGGACGCCCAGGAGAAGG | + |
Preference number: 4 (lower is better) Translates to: IHHYGNGMSLEIGGSCLWEAPSS*WTPRRR Trigger: CCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGCCTC...CCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | TGTGTGCTGGCAGAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGCTGCAGCGTTACCGTaGTCTCTGCCTCAGCCACAG | + |
Preference number: 4 (lower is better) Translates to: CVLAEVLLIHHYGNGMSLAAALP*SLPQPQ Trigger: CTGTGGCTGAGGCAGAGACCACGGTAACGCTGCAGC...CAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTCTGCCAGCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | ACCGAGGAATGTCGAGTCTCAATGCATCTAAAACGTGGGTCCCGGAGTCTGTCACAAAGTGCAGCTGTGTaGTCCAGCGCCGGTCCCCTT | + |
Preference number: 4 (lower is better) Translates to: TEECRVSMHLKRGSRSLSQSAAV*SSAGPL Trigger: AAGGGGACCGGCGCTGGATCACACAGCTGCACTTTG...TGACAGACTCCGGGACCCACGTTTTAGATGCATTGAGACTCGACATTCCTCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | ATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGCGCTCACCATGGCAGTaGGCCGGTCCTCCACCACAT | + |
Preference number: 4 (lower is better) Translates to: IHHYGNGMSLEIGGSCLWRSPWQ*AGPPPH Trigger: ATGTGGTGGAGGACCGGCTCACTGCCATGGTGAGCG...CCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 |
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CDS-3UTR TCA 90 bp | TGTGTGCTGGCAGAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGAAGCCCTTGCAAGTCTaGCACAGGCAACTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: CVLAEVLLIHHYGNGMSLKPLQV*HRQLQG Trigger: GCCCTGCAGTTGCCTGTGTCAGACTTGCAAGGGCTT...CAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTCTGCCAGCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | CTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTAGAGAGAAGGGACAGGTaGCCCGATCGGAGCCCAGCA | + |
Preference number: 4 (lower is better) Translates to: LIHHYGNGMSLEIGGSCLERRDR*PDRSPA Trigger: TGCTGGGCTCCGATCGGGTCACCTGTCCCTTCTCTC...TAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | TGTGTGCTGGCAGAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGCCTCCACCAACGGCCTaGAGAATCTCAGGAGACAGG | + |
Preference number: 4 (lower is better) Translates to: CVLAEVLLIHHYGNGMSLPPPTA*RISGDR Trigger: CCTGTCTCCTGAGATTCTGCAGGCCGTTGGTGGAGG...CAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTCTGCCAGCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | GGCAGACCAGAAGTATTTTATTCGCAAGGGTCGGGAGTGGAGGTCGTAGGTGGGTGTAGCTGCCGAACATaGGCCTCCAGGTCTCGGTTT | + |
Preference number: 4 (lower is better) Translates to: GRPEVFYSQGSGVEVVGGCSCRT*ASRSRF Trigger: AAACCGAGACCTGGAGGCGCATGTTCGGCAGCTACA...CCCACCTACGACCTCCACTCCCGACCCTTGCGAATAAAATACTTCTGGTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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3UTR CAA 72 bp | CCGAAGCCAAAGACTCCGTGTGTGCTGGCAGAGGTCTaGCTGATCCATCACTATGGGAATGGGATGTCCCTG | + |
Preference number: 4 (lower is better) Translates to: PKPKTPCVLAEV*LIHHYGNGMSL Trigger: CAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTCTGCCAGCACACACGGAGTCTTTGGCTTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | ACCGAGGAATGTCGAGTCTCAATGCATCTAAAACGTGGGTCCCGGAGTCTGTCACATCAGGCTGCAGTTTaGGGCAGGAGCCGAAGTCTG | + |
Preference number: 4 (lower is better) Translates to: TEECRVSMHLKRGSRSLSHQAAV*GRSRSL Trigger: CAGACTTCGGCTCCTGCCTCAAACTGCAGCCTGATG...TGACAGACTCCGGGACCCACGTTTTAGATGCATTGAGACTCGACATTCCTCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | TTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAGCTGACTCTGGCCCGTAGCTaGCTGCCCCAGGCCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: LWLVTDGWESEKVKSDELTLARS*LPQALH Trigger: GTGGAGGGCCTGGGGCAGGCAGCTACGGGCCAGAGT...CAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | ATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGTCGCGGCTCAGGCTCTaGCGGGTGAGAACCTCTTCT | + |
Preference number: 4 (lower is better) Translates to: IHHYGNGMSLEIGGSCLWSRLRL*RVRTSS Trigger: AGAAGAGGTTCTCACCCGGCAGAGCCTGAGCCGCGA...CCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | TCAGTGAGTCAGATAACAAGATCAATAAATACCCACACTGCTTTGGGGGAGGGGAGGCCACCAACCCAGTaGAGCCCAGTGTGGCGGCAG | + |
Preference number: 4 (lower is better) Translates to: SVSQITRSINTHTALGEGRPPTQ*SPVWRQ Trigger: CTGCCGCCACACTGGGCTGCACTGGGTTGGTGGCCT...CCCCTCCCCCAAAGCAGTGTGGGTATTTATTGATCTTGTTATCTGACTCACTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032568.14 ENSMUST00000108474.2 |
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CDS-3UTR CCA 90 bp | CTGAGTAAAGCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTGGCTACCAAAGAAAGGATGTTTCTaGAAATCACCTGCCCCACCT | + |
Preference number: 4 (lower is better) Translates to: LSKARSANAQLLQQRWLPKKGCF*KSPAPP Trigger: AGGTGGGGCAGGTGATTTCCAGAAACATCCTTTCTT...TGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CCA 90 bp | GGCAGACCAGAAGTATTTTATTCGCAAGGGTCGGGAGTGGAGGTCGTAGGTGGGAATTGCATGTGTCCGTaGCACCCTCGAAGTCTGGTG | + |
Preference number: 4 (lower is better) Translates to: GRPEVFYSQGSGVEVVGGNCMCP*HPRSLV Trigger: CACCAGACTTCGAGGGTGCCACGGACACATGCAATT...CCCACCTACGACCTCCACTCCCGACCCTTGCGAATAAAATACTTCTGGTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | ATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGTCTGCCAGGCGAATGTaGCCACATCGGTCCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: IHHYGNGMSLEIGGSCLWSARRM*PHRSSR Trigger: TCTGCTGGACCGATGTGGGCACATTCGCCTGGCAGA...CCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | TCAGTGAGTCAGATAACAAGATCAATAAATACCCACACTGCTTTGGGGGAGGGGGGCGAACACGCCCAGTaGCCACCAGTCACACTCTGG | + |
Preference number: 4 (lower is better) Translates to: SVSQITRSINTHTALGEGGEHAQ*PPVTLW Trigger: CCAGAGTGTGACTGGTGGGCACTGGGCGTGTTCGCC...CCCCTCCCCCAAAGCAGTGTGGGTATTTATTGATCTTGTTATCTGACTCACTGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | CTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAGCTGAGCAGTGGCGAACACGCCCAGTaGCCACCAGTCACACTCTGG | + |
Preference number: 4 (lower is better) Translates to: LVTDGWESEKVKSDELSSGEHAQ*PPVTLW Trigger: CCAGAGTGTGACTGGTGGGCACTGGGCGTGTTCGCC...ACTGCTCAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | CCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGCTTGTAGCTGCCGAACATaGGCCTCCAGGTCTCGGTTT | + |
Preference number: 4 (lower is better) Translates to: PSLWEWDVPGNRGLMLMACSCRT*ASRSRF Trigger: AAACCGAGACCTGGAGGCGCATGTTCGGCAGCTACA...AGCCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | ATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGTGGAGAAGTTCTGGTTaGCGGTCCGGATGGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: IHHYGNGMSLEIGGSCLWWRSSG*RSGWPP Trigger: TGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCA...CCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | GGCAGACCAGAAGTATTTTATTCGCAAGGGTCGGGAGTGGAGGTCGTAGGTGGGTCAAAATCATCCCTCTaGAGTCGGACCTCCTTAAGC | + |
Preference number: 4 (lower is better) Translates to: GRPEVFYSQGSGVEVVGGSKSSL*SRTSLS Trigger: GCTTAAGGAGGTCCGACTGCAGAGGGATGATTTTGA...CCCACCTACGACCTCCACTCCCGACCCTTGCGAATAAAATACTTCTGGTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | CTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATCCGCTCCCCAAACTTaGTCAGCAGCGTTAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: LIHHYGNGMSLEIGGSCLSAPQT*SAALAG Trigger: ACCTGCTAACGCTGCTGAGCAAGTTTGGGGAGCGGA...TAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | GAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCTGACACAGGCAACTaGAGGGCCTCTAGTTCCATA | + |
Preference number: 4 (lower is better) Translates to: EVLLIHHYGNGMSLEIGGSDTGN*RASSSI Trigger: TATGGAACTAGAGGCCCTGCAGTTGCCTGTGTCAGA...GCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | CAGACCAGAAGTATTTTATTCGCAAGGGTCGGGAGTGGAGGTCGTAGGTGGGGATCTGACACAGGCAACTaGAGGGCCTCTAGTTCCATA | + |
Preference number: 4 (lower is better) Translates to: QTRSILFARVGSGGRRWGSDTGN*RASSSI Trigger: TATGGAACTAGAGGCCCTGCAGTTGCCTGTGTCAGA...TCCCCACCTACGACCTCCACTCCCGACCCTTGCGAATAAAATACTTCTGGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | GAGGTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTGCAAGTCAAGCCCTTaGAAGTCTGACACAGGCAAC | + |
Preference number: 4 (lower is better) Translates to: EVLLIHHYGNGMSLEIGGCKSSP*KSDTGN Trigger: GTTGCCTGTGTCAGACTTGCAAGGGCTTGACTTGCA...GCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGACCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | CTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAGCTGAGCAGTGGGGACACTGGGGGCTaGAAGTCAAGCCCTTGCAAG | + |
Preference number: 4 (lower is better) Translates to: LVTDGWESEKVKSDELSSGDTGG*KSSPCK Trigger: CTTGCAAGGGCTTGACTTGCAGCCCCCAGTGTCCCC...ACTGCTCAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | CTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAGCTGAGCAGTAGAAGCATGGGAAGGTaGATCCGTGGCCCGGGGACT | + |
Preference number: 4 (lower is better) Translates to: LVTDGWESEKVKSDELSSRSMGR*IRGPGT Trigger: AGTCCCCGGGCCACGGATCCACCTTCCCATGCTTCT...ACTGCTCAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | TCAGTGAGTCAGATAACAAGATCAATAAATACCCACACTGCTTTGGGGGAGGGGAAGCCCTTGCAAGTCTaGCACAGGCAACTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: SVSQITRSINTHTALGEGKPLQV*HRQLQG Trigger: GCCCTGCAGTTGCCTGTGTCAGACTTGCAAGGGCTT...CCCCTCCCCCAAAGCAGTGTGGGTATTTATTGATCTTGTTATCTGACTCACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | TTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAGCTGGGGGACACTGGGGGCTaGAAGTCAAGCCCTTGCAAG | + |
Preference number: 4 (lower is better) Translates to: LWLVTDGWESEKVKSDELGDTGG*KSSPCK Trigger: CTTGCAAGGGCTTGACTTGCAGCCCCCAGTGTCCCC...CAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | GGCAGACCAGAAGTATTTTATTCGCAAGGGTCGGGAGTGGAGGTCGTAGGTGGGCAGCAGAATGTTATCTaGTTTGATGTCCCTGTGCAC | + |
Preference number: 4 (lower is better) Translates to: GRPEVFYSQGSGVEVVGGQQNVI*FDVPVH Trigger: GTGCACAGGGACATCAAACCAGATAACATTCTGCTG...CCCACCTACGACCTCCACTCCCGACCCTTGCGAATAAAATACTTCTGGTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | TCAGTGAGTCAGATAACAAGATCAATAAATACCCACACTGCTTTGGGGGAGGGGCATATGTCTCGGCTGTaGAGTCCGCGTAGAAGGGGG | + |
Preference number: 4 (lower is better) Translates to: SVSQITRSINTHTALGEGHMSRL*SPRRRG Trigger: CCCCCTTCTACGCGGACTCCACAGCCGAGACATATG...CCCCTCCCCCAAAGCAGTGTGGGTATTTATTGATCTTGTTATCTGACTCACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | ATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGAATTGCATGTGTCCGTaGCACCCTCGAAGTCTGGTG | + |
Preference number: 4 (lower is better) Translates to: IHHYGNGMSLEIGGSCLWNCMCP*HPRSLV Trigger: CACCAGACTTCGAGGGTGCCACGGACACATGCAATT...CCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | TTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAGCTGGCTGCAGCGTTACCGTaGTCTCTGCCTCAGCCACAG | + |
Preference number: 4 (lower is better) Translates to: LWLVTDGWESEKVKSDELAAALP*SLPQPQ Trigger: CTGTGGCTGAGGCAGAGACCACGGTAACGCTGCAGC...CAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | TCATGCTTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATCAAAGTGCAGCTGTGTaGTCCAGCGCCGGTCCCCTT | + |
Preference number: 4 (lower is better) Translates to: SCLWLVTDGWESEKVKSDQSAAV*SSAGPL Trigger: AAGGGGACCGGCGCTGGATCACACAGCTGCACTTTG...ATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAAGCATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | GTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCAGAATGTTATCTGGTTTaGTGTCCCTGTGCACGTAGC | + |
Preference number: 4 (lower is better) Translates to: VLLIHHYGNGMSLEIGGSECYLV*CPCARS Trigger: GCTACGTGCACAGGGACATCAAACCAGATAACATTC...TGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | TTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAGCTGCATCAGGCTGCAGTTTaGGGCAGGAGCCGAAGTCTG | + |
Preference number: 4 (lower is better) Translates to: LWLVTDGWESEKVKSDELHQAAV*GRSRSL Trigger: CAGACTTCGGCTCCTGCCTCAAACTGCAGCCTGATG...CAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | TCATGCTTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATACAGCAGCCCACGAATaGGGTCCTGAGCTTCCTCGG | + |
Preference number: 4 (lower is better) Translates to: SCLWLVTDGWESEKVKSDTAAHE*GPELPR Trigger: CCGAGGAAGCTCAGGACCTCATTCGTGGGCTGCTGT...ATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAAGCATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | CTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAGCTGAGCAGTTCCGCTCCCCAAACTTaGTCAGCAGCGTTAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: LVTDGWESEKVKSDELSSSAPQT*SAALAG Trigger: ACCTGCTAACGCTGCTGAGCAAGTTTGGGGAGCGGA...ACTGCTCAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | CTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATCAAAATCATCCCTCTaGAGTCGGACCTCCTTAAGC | + |
Preference number: 4 (lower is better) Translates to: LIHHYGNGMSLEIGGSCLSKSSL*SRTSLS Trigger: GCTTAAGGAGGTCCGACTGCAGAGGGATGATTTTGA...TAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | TTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAGCTGTGTAGCTGCCGAACATaGGCCTCCAGGTCTCGGTTT | + |
Preference number: 4 (lower is better) Translates to: LWLVTDGWESEKVKSDELCSCRT*ASRSRF Trigger: AAACCGAGACCTGGAGGCGCATGTTCGGCAGCTACA...CAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | ACCGAGGAATGTCGAGTCTCAATGCATCTAAAACGTGGGTCCCGGAGTCTGTCATTCATGGCATACACTTaGCCCGTCTGTTTCATCTTC | + |
Preference number: 4 (lower is better) Translates to: TEECRVSMHLKRGSRSLSFMAYT*PVCFIF Trigger: GAAGATGAAACAGACGGGCCAAGTGTATGCCATGAA...TGACAGACTCCGGGACCCACGTTTTAGATGCATTGAGACTCGACATTCCTCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | GTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCACAGCAGAATGTTATCTaGTTTGATGTCCCTGTGCAC | + |
Preference number: 4 (lower is better) Translates to: VLLIHHYGNGMSLEIGGSQQNVI*FDVPVH Trigger: GTGCACAGGGACATCAAACCAGATAACATTCTGCTG...TGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | TCATGCTTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATTCCGCTCCCCAAACTTaGTCAGCAGCGTTAGCAGGT | + |
Preference number: 4 (lower is better) Translates to: SCLWLVTDGWESEKVKSDSAPQT*SAALAG Trigger: ACCTGCTAACGCTGCTGAGCAAGTTTGGGGAGCGGA...ATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAAGCATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | ATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGAAGAAAGGATGTTTCTaGAAATCACCTGCCCCACCT | + |
Preference number: 4 (lower is better) Translates to: IHHYGNGMSLEIGGSCLWKKGCF*KSPAPP Trigger: AGGTGGGGCAGGTGATTTCCAGAAACATCCTTTCTT...CCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000154199.8 |
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CDS-3UTR GCA 90 bp | CTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAGCTGAGCAGTTCAAAATCATCCCTCTaGAGTCGGACCTCCTTAAGC | + |
Preference number: 4 (lower is better) Translates to: LVTDGWESEKVKSDELSSSKSSL*SRTSLS Trigger: GCTTAAGGAGGTCCGACTGCAGAGGGATGATTTTGA...ACTGCTCAGCTCATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CCA 90 bp | GGGGGCTCATGCTTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATTCATGGCATACACTTaGCCCGTCTGTTTCATCTTC | + |
Preference number: 4 (lower is better) Translates to: GGSCLWLVTDGWESEKVKFMAYT*PVCFIF Trigger: GAAGATGAAACAGACGGGCCAAGTGTATGCCATGAA...TTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAAGCATGAGCCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR TCA 90 bp | TCATGCTTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATGAATGTTATCTGGTTTaGTGTCCCTGTGCACGTAGC | + |
Preference number: 4 (lower is better) Translates to: SCLWLVTDGWESEKVKSDECYLV*CPCARS Trigger: GCTACGTGCACAGGGACATCAAACCAGATAACATTC...ATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAAGCATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS CCA 90 bp | GGTTTCGGACCTCGGCCTCCTGTAGTTGGCTGGAGAAGTTCTGGTTaGCGGTCCGGATGGCCTCCAGCTCGCGGCTCAGGCTCTGCCGGG | + |
Preference number: 5 (lower is better) Translates to: GFGPRPPVVGWRSSG*RSGWPPARGSGSAG Trigger: CCCGGCAGAGCCTGAGCCGCGAGCTGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAGCCAACTACAGGAGGCCGAGGTCCGAAACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 90 bp | GCGCCTCCAGGTCTCGGTTTCGGACCTCGGCCTCCTGTAGTTGGCTaGAGAAGTTCTGGTTGGCGGTCCGGATGGCCTCCAGCTCGCGGC | + |
Preference number: 5 (lower is better) Translates to: APPGLGFGPRPPVVG*RSSGWRSGWPPARG Trigger: GCCGCGAGCTGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAGCCAACTACAGGAGGCCGAGGTCCGAAACCGAGACCTGGAGGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CAA 90 bp | GCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCCTGGAGAAGTTCTGGTaGGCGGTCCGGATGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: AVATSSAGTRGAGHEPCSLEKFW*AVRMAS Trigger: GGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAG...GGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS TCA 90 bp | TGGCGGTCCGGATGGCCTCCAGCTCGCGGCTCAGGCTCTGCCGGGTaGGAACCTCTTCTTCCAGGGCTTCCTGGAGCTGCTGCAGCGTTA | + |
Preference number: 5 (lower is better) Translates to: WRSGWPPARGSGSAG*EPLLPGLPGAAAAL Trigger: TAACGCTGCAGCAGCTCCAGGAAGCCCTGGAAGAAGAGGTTCTCACCCGGCAGAGCCTGAGCCGCGAGCTGGAGGCCATCCGGACCGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS GCA 90 bp | TTCTGGTTGGCGGTCCGGATGGCCTCCAGCTCGCGGCTCAGGCTCTaGCGGGTGAGAACCTCTTCTTCCAGGGCTTCCTGGAGCTGCTGC | + |
Preference number: 5 (lower is better) Translates to: FWLAVRMASSSRLRL*RVRTSSSRASWSCC Trigger: GCAGCAGCTCCAGGAAGCCCTGGAAGAAGAGGTTCTCACCCGGCAGAGCCTGAGCCGCGAGCTGGAGGCCATCCGGACCGCCAACCAGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CAA 90 bp | CGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTCCTCTGGAGAAGTTCTGGTaGGCGGTCCGGATGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: RWLPALQEPGVLGTSPVPLEKFW*AVRMAS Trigger: GGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAG...AGGAACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS GCA 90 bp | AGGCTCTGCCGGGTGAGAACCTCTTCTTCCAGGGCTTCCTGGAGCTaGTGCAGCGTTACCGTGGTCTCTGCCTCAGCCACAGGGGCAGGG | + |
Preference number: 5 (lower is better) Translates to: RLCRVRTSSSRASWS*CSVTVVSASATGAG Trigger: CCCTGCCCCTGTGGCTGAGGCAGAGACCACGGTAACGCTGCAGCAGCTCCAGGAAGCCCTGGAAGAAGAGGTTCTCACCCGGCAGAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 90 bp | TCTCGGTTTCGGACCTCGGCCTCCTGTAGTTGGCTGGAGAAGTTCTaGTTGGCGGTCCGGATGGCCTCCAGCTCGCGGCTCAGGCTCTGC | + |
Preference number: 5 (lower is better) Translates to: SRFRTSASCSWLEKF*LAVRMASSSRLRLC Trigger: GCAGAGCCTGAGCCGCGAGCTGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAGCCAACTACAGGAGGCCGAGGTCCGAAACCGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS GCA 90 bp | CTCTGCCGGGTGAGAACCTCTTCTTCCAGGGCTTCCTGGAGCTGCTaGAGCGTTACCGTGGTCTCTGCCTCAGCCACAGGGGCAGGGACA | + |
Preference number: 5 (lower is better) Translates to: LCRVRTSSSRASWSC*SVTVVSASATGAGT Trigger: TGTCCCTGCCCCTGTGGCTGAGGCAGAGACCACGGTAACGCTGCAGCAGCTCCAGGAAGCCCTGGAAGAAGAGGTTCTCACCCGGCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 90 bp | ACATGCGCCTCCAGGTCTCGGTTTCGGACCTCGGCCTCCTGTAGTTaGCTGGAGAAGTTCTGGTTGGCGGTCCGGATGGCCTCCAGCTCG | + |
Preference number: 5 (lower is better) Translates to: TCASRSRFRTSASCS*LEKFWLAVRMASSS Trigger: CGAGCTGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAGCCAACTACAGGAGGCCGAGGTCCGAAACCGAGACCTGGAGGCGCATGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CAA 90 bp | CAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCTGTTATCCGCTCCCCAAACTaGCTCAGCAGCGTTAGCAGG | + |
Preference number: 5 (lower is better) Translates to: QRWLPALQEPGVLGTSPVIRSPN*LSSVSR Trigger: CCTGCTAACGCTGCTGAGCAAGTTTGGGGAGCGGAT...AACAGGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS TCA 90 bp | TCCACCCACTGCAAGAAGTCGGCCACATACTTGTCCTGGGCTAGGTaGGAGGCACCCAGCTCCTGGTGGACGCCCAGGAGAAGGTCGAGC | + |
Preference number: 5 (lower is better) Translates to: STHCKKSATYLSWAR*EAPSSWWTPRRRSS Trigger: GCTCGACCTTCTCCTGGGCGTCCACCAGGAGCTGGGTGCCTCTCACCTAGCCCAGGACAAGTATGTGGCCGACTTCTTGCAGTGGGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000122999.8 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS TCA 90 bp | CACGAAGGGCAGGCGCACCCCAAGGGGCATGTCTTCCTGCATGTCTaGCAGCGTCTCCATGGCAGTGAGCCGGTCCTCCACCACATCGAA | + |
Preference number: 5 (lower is better) Translates to: HEGQAHPKGHVFLHV*QRLHGSEPVLHHIE Trigger: TTCGATGTGGTGGAGGACCGGCTCACTGCCATGGAGACGCTGTCAGACATGCAGGAAGACATGCCCCTTGGGGTGCGCCTGCCCTTCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CAA 90 bp | CTGAGTAAAGCAAGGTCGGCGAATGCCCAGCTGCTGCAGCAGCGGTGGCTACCACTGGAGAAGTTCTGGTaGGCGGTCCGGATGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: LSKARSANAQLLQQRWLPLEKFW*AVRMAS Trigger: GGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAG...TGGTAGCCACCGCTGCTGCAGCAGCTGGGCATTCGCCGACCTTGCTTTACTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CAA 90 bp | GCAGCAGCGGTGGCTACCAGCTCTGCAGGAACCAGGGGTGCTGGGCACGAGCCCCTTCATGGCATACACTaGGCCCGTCTGTTTCATCTT | + |
Preference number: 5 (lower is better) Translates to: AAAVATSSAGTRGAGHEPLHGIH*ARLFHL Trigger: AAGATGAAACAGACGGGCCAAGTGTATGCCATGAAG...GGGCTCGTGCCCAGCACCCCTGGTTCCTGCAGAGCTGGTAGCCACCGCTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 90 bp | TGTCTGCCAGCGGCAGCGACAAGTGTTCCCTGTAGTGCACAATCTTaGCATATGTCTCGGCTGTGGAGTCCGCGTAGAAGGGGGTCTGCC | + |
Preference number: 5 (lower is better) Translates to: CLPAAATSVPCSAQS*HMSRLWSPRRRGSA Trigger: GGCAGACCCCCTTCTACGCGGACTCCACAGCCGAGACATATGCCAAGATTGTGCACTACAGGGAACACTTGTCGCTGCCGCTGGCAGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CAA 90 bp | CCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCATGCTTATGGCTCTGGAGAAGTTCTGGTaGGCGGTCCGGATGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: PSLWEWDVPGNRGLMLMALEKFW*AVRMAS Trigger: GGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAG...AGCCATAAGCATGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CAA 90 bp | TCAGTGAGTCAGATAACAAGATCAATAAATACCCACACTGCTTTGGGGGAGGGGCTGGAGAAGTTCTGGTaGGCGGTCCGGATGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: SVSQITRSINTHTALGEGLEKFW*AVRMAS Trigger: GGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAG...CCCCTCCCCCAAAGCAGTGTGGGTATTTATTGATCTTGTTATCTGACTCACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS CCA 90 bp | ACAAGTGTTCCCTGTAGTGCACAATCTTGGCATATGTCTCGGCTGTaGAGTCCGCGTAGAAGGGGGTCTGCCCATAGAACATCTCATAGG | + |
Preference number: 5 (lower is better) Translates to: TSVPCSAQSWHMSRL*SPRRRGSAHRTSHR Trigger: CCTATGAGATGTTCTATGGGCAGACCCCCTTCTACGCGGACTCCACAGCCGAGACATATGCCAAGATTGTGCACTACAGGGAACACTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS-3UTR CAA 90 bp | GGCAGACCAGAAGTATTTTATTCGCAAGGGTCGGGAGTGGAGGTCGTAGGTGGGCTTCATGGCATACACTaGGCCCGTCTGTTTCATCTT | + |
Preference number: 5 (lower is better) Translates to: GRPEVFYSQGSGVEVVGGLHGIH*ARLFHL Trigger: AAGATGAAACAGACGGGCCAAGTGTATGCCATGAAG...CCCACCTACGACCTCCACTCCCGACCCTTGCGAATAAAATACTTCTGGTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CAA 90 bp | GTCTTGCTGATCCATCACTATGGGAATGGGATGTCCCTGGAAATAGGGGGCTCACTTCATGGCATACACTaGGCCCGTCTGTTTCATCTT | + |
Preference number: 5 (lower is better) Translates to: VLLIHHYGNGMSLEIGGSLHGIH*ARLFHL Trigger: AAGATGAAACAGACGGGCCAAGTGTATGCCATGAAG...TGAGCCCCCTATTTCCAGGGACATCCCATTCCCATAGTGATGGATCAGCAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS-3UTR CAA 90 bp | TCATGCTTATGGCTTGTAACTGATGGCTGGGAGAGTGAAAAAGTGAAATCGGATTCCCTTGGGGAGGATTaGGCGAGAAGCATGGGAAGG | + |
Preference number: 5 (lower is better) Translates to: SCLWLVTDGWESEKVKSDSLGED*ARSMGR Trigger: CCTTCCCATGCTTCTCGCCAAATCCTCCCCAAGGGA...ATCCGATTTCACTTTTTCACTCTCCCAGCCATCAGTTACAAGCCATAAGCATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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CDS-3UTR CAA 90 bp | TCAGTGAGTCAGATAACAAGATCAATAAATACCCACACTGCTTTGGGGGAGGGGCTTCATGGCATACACTaGGCCCGTCTGTTTCATCTT | + |
Preference number: 5 (lower is better) Translates to: SVSQITRSINTHTALGEGLHGIH*ARLFHL Trigger: AAGATGAAACAGACGGGCCAAGTGTATGCCATGAAG...CCCCTCCCCCAAAGCAGTGTGGGTATTTATTGATCTTGTTATCTGACTCACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 |
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CDS GCA 72 bp | GCGGTCCGGATGGCCTCCAGCTCGCGGCTCAGGCTCTaGCGGGTGAGAACCTCTTCTTCCAGGGCTTCCTGG | + |
Preference number: 6 (lower is better) Translates to: AVRMASSSRLRL*RVRTSSSRASW Trigger: CCAGGAAGCCCTGGAAGAAGAGGTTCTCACCCGGCAGAGCCTGAGCCGCGAGCTGGAGGCCATCCGGACCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CAA 90 bp | CGGTTTCGGACCTCGGCCTCCTGTAGTTGGCTGGAGAAGTTCTGGTaGGCGGTCCGGATGGCCTCCAGCTCGCGGCTCAGGCTCTGCCGG | + |
Preference number: 6 (lower is better) Translates to: RFRTSASCSWLEKFW*AVRMASSSRLRLCR Trigger: CCGGCAGAGCCTGAGCCGCGAGCTGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAGCCAACTACAGGAGGCCGAGGTCCGAAACCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 72 bp | CCTCGGCCTCCTGTAGTTGGCTGGAGAAGTTCTGGTTaGCGGTCCGGATGGCCTCCAGCTCGCGGCTCAGGC | + |
Preference number: 6 (lower is better) Translates to: PRPPVVGWRSSG*RSGWPPARGSG Trigger: GCCTGAGCCGCGAGCTGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAGCCAACTACAGGAGGCCGAGG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 72 bp | CGGACCTCGGCCTCCTGTAGTTGGCTGGAGAAGTTCTaGTTGGCGGTCCGGATGGCCTCCAGCTCGCGGCTC | + |
Preference number: 6 (lower is better) Translates to: RTSASCSWLEKF*LAVRMASSSRL Trigger: GAGCCGCGAGCTGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAGCCAACTACAGGAGGCCGAGGTCCG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS TCA 72 bp | GGATGGCCTCCAGCTCGCGGCTCAGGCTCTGCCGGGTaGGAACCTCTTCTTCCAGGGCTTCCTGGAGCTGCT | + |
Preference number: 6 (lower is better) Translates to: GWPPARGSGSAG*EPLLPGLPGAA Trigger: AGCAGCTCCAGGAAGCCCTGGAAGAAGAGGTTCTCACCCGGCAGAGCCTGAGCCGCGAGCTGGAGGCCATCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CAA 72 bp | ACCTCGGCCTCCTGTAGTTGGCTGGAGAAGTTCTGGTaGGCGGTCCGGATGGCCTCCAGCTCGCGGCTCAGG | + |
Preference number: 6 (lower is better) Translates to: TSASCSWLEKFW*AVRMASSSRLR Trigger: CCTGAGCCGCGAGCTGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAGCCAACTACAGGAGGCCGAGGT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS TCA 72 bp | CAGGCGCACCCCAAGGGGCATGTCTTCCTGCATGTCTaGCAGCGTCTCCATGGCAGTGAGCCGGTCCTCCAC | + |
Preference number: 6 (lower is better) Translates to: QAHPKGHVFLHV*QRLHGSEPVLH Trigger: GTGGAGGACCGGCTCACTGCCATGGAGACGCTGTCAGACATGCAGGAAGACATGCCCCTTGGGGTGCGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS GCA 72 bp | ACGAAGGGCAGGCGCACCCCAAGGGGCATGTCTTCCTaGATGTCTGACAGCGTCTCCATGGCAGTGAGCCGG | + |
Preference number: 6 (lower is better) Translates to: TKGRRTPRGMSS*MSDSVSMAVSR Trigger: CCGGCTCACTGCCATGGAGACGCTGTCAGACATGCAGGAAGACATGCCCCTTGGGGTGCGCCTGCCCTTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CAA 90 bp | CCCCCGCTCACCATGGCAGTGAGCCGGTCCTCCACCACATCGAAATaGCATGTGTCCGTGGCACCCTCGAAGTCTGCCCCACCTCGACCT | + |
Preference number: 6 (lower is better) Translates to: PPLTMAVSRSSTTSK*HVSVAPSKSAPPRP Trigger: AGGTCGAGGTGGGGCAGACTTCGAGGGTGCCACGGACACATGCAATTTCGATGTGGTGGAGGACCGGCTCACTGCCATGGTGAGCGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108474.2 |
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CDS CAA 90 bp | AGTCGAGGCCAGAACGGGAGTATAGGGAGTTCCCTTGGGGAGGATTaGGCGAGAAGCATGGGAAGGTGGATCCGTGGCCCGGGGACTGGG | + |
Preference number: 6 (lower is better) Translates to: SRGQNGSIGSSLGED*ARSMGRWIRGPGTG Trigger: CCCAGTCCCCGGGCCACGGATCCACCTTCCCATGCTTCTCGCCAAATCCTCCCCAAGGGAACTCCCTATACTCCCGTTCTGGCCTCGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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CDS CCA 72 bp | GGTCTCGGTTTCGGACCTCGGCCTCCTGTAGTTGGCTaGAGAAGTTCTGGTTGGCGGTCCGGATGGCCTCCA | + |
Preference number: 6 (lower is better) Translates to: GLGFGPRPPVVG*RSSGWRSGWPP Trigger: TGGAGGCCATCCGGACCGCCAACCAGAACTTCTCCAGCCAACTACAGGAGGCCGAGGTCCGAAACCGAGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 72 bp | TCCAGGTCTCGGTTTCGGACCTCGGCCTCCTGTAGTTaGCTGGAGAAGTTCTGGTTGGCGGTCCGGATGGCC | + |
Preference number: 6 (lower is better) Translates to: SRSRFRTSASCS*LEKFWLAVRMA Trigger: GGCCATCCGGACCGCCAACCAGAACTTCTCCAGCCAACTACAGGAGGCCGAGGTCCGAAACCGAGACCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 72 bp | GCCGGTCCTCCACCACATCGAAATTGCATGTGTCCGTaGCACCCTCGAAGTCTGCCCCACCTCGACCTAGCC | + |
Preference number: 6 (lower is better) Translates to: AGPPPHRNCMCP*HPRSLPHLDLA Trigger: GGCTAGGTCGAGGTGGGGCAGACTTCGAGGGTGCCACGGACACATGCAATTTCGATGTGGTGGAGGACCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108474.2 |
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CDS GCA 72 bp | GTGAGAACCTCTTCTTCCAGGGCTTCCTGGAGCTGCTaGAGCGTTACCGTGGTCTCTGCCTCAGCCACAGGG | + |
Preference number: 6 (lower is better) Translates to: VRTSSSRASWSC*SVTVVSASATG Trigger: CCCTGTGGCTGAGGCAGAGACCACGGTAACGCTGCAGCAGCTCCAGGAAGCCCTGGAAGAAGAGGTTCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS GCA 72 bp | CGGGTGAGAACCTCTTCTTCCAGGGCTTCCTGGAGCTaGTGCAGCGTTACCGTGGTCTCTGCCTCAGCCACA | + |
Preference number: 6 (lower is better) Translates to: RVRTSSSRASWS*CSVTVVSASAT Trigger: TGTGGCTGAGGCAGAGACCACGGTAACGCTGCAGCAGCTCCAGGAAGCCCTGGAAGAAGAGGTTCTCACCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS GCA 72 bp | TGCAAGTCAAGCCCTTGCAAGTCTGACACAGGCAACTaGAGGGCCTCTAGTTCCATAGGGGTGGGGTCCGGG | + |
Preference number: 6 (lower is better) Translates to: CKSSPCKSDTGN*RASSSIGVGSG Trigger: CCCGGACCCCACCCCTATGGAACTAGAGGCCCTGCAGTTGCCTGTGTCAGACTTGCAAGGGCTTGACTTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CAA 72 bp | ACCATGGCAGTGAGCCGGTCCTCCACCACATCGAAATaGCATGTGTCCGTGGCACCCTCGAAGTCTGCCCCA | + |
Preference number: 6 (lower is better) Translates to: TMAVSRSSTTSK*HVSVAPSKSAP Trigger: TGGGGCAGACTTCGAGGGTGCCACGGACACATGCAATTTCGATGTGGTGGAGGACCGGCTCACTGCCATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108474.2 |
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CDS CAA 72 bp | CAGAACGGGAGTATAGGGAGTTCCCTTGGGGAGGATTaGGCGAGAAGCATGGGAAGGTGGATCCGTGGCCCG | + |
Preference number: 6 (lower is better) Translates to: QNGSIGSSLGED*ARSMGRWIRGP Trigger: CGGGCCACGGATCCACCTTCCCATGCTTCTCGCCAAATCCTCCCCAAGGGAACTCCCTATACTCCCGTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154199.8 |
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CDS GCA 72 bp | ATCATCCCTCTGCAGTCGGACCTCCTTAAGCCTTGCTaGAATGGGCTCCACCCACTGCAAGAAGTCGGCCAC | + |
Preference number: 6 (lower is better) Translates to: IIPLQSDLLKPC*NGLHPLQEVGH Trigger: GTGGCCGACTTCTTGCAGTGGGTGGAGCCCATTGCAGCAAGGCTTAAGGAGGTCCGACTGCAGAGGGATGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000122999.8 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS GCA 72 bp | ACCTCCTTAAGCCTTGCTGCAATGGGCTCCACCCACTaGAAGAAGTCGGCCACATACTTGTCCTGGGCTAGG | + |
Preference number: 6 (lower is better) Translates to: TSLSLAAMGSTH*KKSATYLSWAR Trigger: CCTAGCCCAGGACAAGTATGTGGCCGACTTCTTGCAGTGGGTGGAGCCCATTGCAGCAAGGCTTAAGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000122999.8 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 72 bp | GCGGCAGCGACAAGTGTTCCCTGTAGTGCACAATCTTaGCATATGTCTCGGCTGTGGAGTCCGCGTAGAAGG | + |
Preference number: 6 (lower is better) Translates to: AAATSVPCSAQS*HMSRLWSPRRR Trigger: CCTTCTACGCGGACTCCACAGCCGAGACATATGCCAAGATTGTGCACTACAGGGAACACTTGTCGCTGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CAA 72 bp | ACCATGGCAGTGAGCCGGTCCTCCACCACATCGAAATaGCATGTGTCCGTGGCACCCTCGAAGTCTGGTGTA | + |
Preference number: 6 (lower is better) Translates to: TMAVSRSSTTSK*HVSVAPSKSGV Trigger: TACACCAGACTTCGAGGGTGCCACGGACACATGCAATTTCGATGTGGTGGAGGACCGGCTCACTGCCATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 |
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CDS CAA 72 bp | TCCATGGCAGTGAGCCGGTCCTCCACCACATCGAAATaGCATGTGTCCGTGGCACCCTCGAAGTCTGGTGTA | + |
Preference number: 6 (lower is better) Translates to: SMAVSRSSTTSK*HVSVAPSKSGV Trigger: TACACCAGACTTCGAGGGTGCCACGGACACATGCAATTTCGATGTGGTGGAGGACCGGCTCACTGCCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS GCA 72 bp | AAAATCATCCCTCTGCAGTCGGACCTCCTTAAGCCTTaGTGCAATGGGCTCCACCCACTGCAAGAAGTCGGC | + |
Preference number: 6 (lower is better) Translates to: KIIPLQSDLLKP*CNGLHPLQEVG Trigger: GCCGACTTCTTGCAGTGGGTGGAGCCCATTGCAGCAAGGCTTAAGGAGGTCCGACTGCAGAGGGATGATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000122999.8 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 72 bp | CCCTGTAGTGCACAATCTTGGCATATGTCTCGGCTGTaGAGTCCGCGTAGAAGGGGGTCTGCCCATAGAACA | + |
Preference number: 6 (lower is better) Translates to: PCSAQSWHMSRL*SPRRRGSAHRT Trigger: TGTTCTATGGGCAGACCCCCTTCTACGCGGACTCCACAGCCGAGACATATGCCAAGATTGTGCACTACAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CCA 72 bp | ATGTCCCACTTATTCATAATCTTCATGGCATACACTTaGCCCGTCTGTTTCATCTTCACCACCGCTACCTCG | + |
Preference number: 6 (lower is better) Translates to: MSHLFIIFMAYT*PVCFIFTTATS Trigger: CGAGGTAGCGGTGGTGAAGATGAAACAGACGGGCCAAGTGTATGCCATGAAGATTATGAATAAGTGGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |
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CDS CAA 72 bp | CATGTCCCACTTATTCATAATCTTCATGGCATACACTaGGCCCGTCTGTTTCATCTTCACCACCGCTACCTC | + |
Preference number: 6 (lower is better) Translates to: HVPLIHNLHGIH*ARLFHLHHRYL Trigger: GAGGTAGCGGTGGTGAAGATGAAACAGACGGGCCAAGTGTATGCCATGAAGATTATGAATAAGTGGGACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032568.14 ENSMUST00000108473.10 ENSMUST00000108474.2 ENSMUST00000154199.8 ENSMUST00000238982.2 |