RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMD (Mus musculus)

Ensembl gene IDs: ENSMUSG00000045103

Ensembl transcript IDs: ENSMUST00000113991.8, ENSMUST00000113992.3, ENSMUST00000114000.8, ENSMUST00000239019.2, ENSMUST00000239269.2

Found 942 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTCGTGCTGGGTTTTGTTTTCTTGGGACAGGATCTCCCTGTGGCTaGCCCAAGACTCCTTACATAGACTTGGCTGGTCTTGACTTTAAG +
Preference number: 1 (lower is better)
Translates to: TRAGFCFLGTGSPCG*PKTPYIDLAGLDFK
Trigger: CTTAAAGTCAAGACCAGCCAAGTCTATGTAAGGAGTCTTGGGCCAGCCACAGGGAGATCCTGTCCCAAGAAAACAAAACCCAGCACGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR GCA 90 bp GACATTTCAGCCCGTCAACTAGACCAGAGAGTTTGGAGACGCTTTTaGTCTCAAAACTTTCCAACCACTGTGCCTTCTCACCCACAATCC +
Preference number: 1 (lower is better)
Translates to: DISARQLDQRVWRRF*SQNFPTTVPSHPQS
Trigger: GGATTGTGGGTGAGAAGGCACAGTGGTTGGAAAGTTTTGAGAGCAAAAGCGTCTCCAAACTCTCTGGTCTAGTTGACGGGCTGAAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR GCA 90 bp AGAGAGTTTGGAGACGCTTTTGCTCTCAAAACTTTCCAACCACTGTaGCTTCTCACCCACAATCCTGTGTGGAGTTACTTGCAGGGAAAC +
Preference number: 1 (lower is better)
Translates to: REFGDAFALKTFQPL*LLTHNPVWSYLQGN
Trigger: GTTTCCCTGCAAGTAACTCCACACAGGATTGTGGGTGAGAAGGCACAGTGGTTGGAAAGTTTTGAGAGCAAAAGCGTCTCCAAACTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR GCA 90 bp ACACTGGAATTAGCACACAGCATATGCATCAAGTACATATACTCGTaGTGGGTTTTGTTTTCTTGGGACAGGATCTCCCTGTGGCTGGCC +
Preference number: 1 (lower is better)
Translates to: TLELAHSICIKYIYS*WVLFSWDRISLWLA
Trigger: GGCCAGCCACAGGGAGATCCTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTGTGTGCTAATTCCAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR GCA 90 bp CTTCTCACCCACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATaGAAAGGAGACAAATGCAGTTCATGGGCTTCTGGACTGATATTC +
Preference number: 1 (lower is better)
Translates to: LLTHNPVWSYLQGNQ*KGDKCSSWASGLIF
Trigger: GAATATCAGTCCAGAAGCCCATGAACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTGGGTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CCA 90 bp GCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCATGGGCTTCTaGACTGATATTCACCAGGGTCACAATGTGATTGGGTTACTTTCT +
Preference number: 1 (lower is better)
Translates to: AGKPMQRRQMQFMGF*TDIHQGHNVIGLLS
Trigger: AGAAAGTAACCCAATCACATTGTGACCCTGGTGAATATCAGTCCAGAAGCCCATGAACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CCA 90 bp TGCATTTGTTTAGACATTTCAGCCCGTCAACTAGACCAGAGAGTTTaGAGACGCTTTTGCTCTCAAAACTTTCCAACCACTGTGCCTTCT +
Preference number: 1 (lower is better)
Translates to: CICLDISARQLDQRV*RRFCSQNFPTTVPS
Trigger: AGAAGGCACAGTGGTTGGAAAGTTTTGAGAGCAAAAGCGTCTCCAAACTCTCTGGTCTAGTTGACGGGCTGAAATGTCTAAACAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR TCA 90 bp TGCAGTTCATGGGCTTCTGGACTGATATTCACCAGGGTCACAATGTaGTTGGGTTACTTTCTTAACAGTAATCCTAAGTCTTGCAGCATT +
Preference number: 1 (lower is better)
Translates to: CSSWASGLIFTRVTM*LGYFLNSNPKSCSI
Trigger: AATGCTGCAAGACTTAGGATTACTGTTAAGAAAGTAACCCAATCACATTGTGACCCTGGTGAATATCAGTCCAGAAGCCCATGAACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR TCA 90 bp GAAACCAATGCAAAGGAGACAAATGCAGTTCATGGGCTTCTGGACTaGTATTCACCAGGGTCACAATGTGATTGGGTTACTTTCTTAACA +
Preference number: 1 (lower is better)
Translates to: ETNAKETNAVHGLLD*YSPGSQCDWVTFLT
Trigger: TGTTAAGAAAGTAACCCAATCACATTGTGACCCTGGTGAATATCAGTCCAGAAGCCCATGAACTGCATTTGTCTCCTTTGCATTGGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CCA 90 bp ATGAATCCTCTAGCTCTCAGTGGAAAGTTTAAAACTAGAAACATCTaGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTT +
Preference number: 1 (lower is better)
Translates to: MNPLALSGKFKTRNI*SPRQYFSVAVVSWL
Trigger: AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACTGAGAGCTAGAGGATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CCA 90 bp AAGCTCTTCCTAGCAGTCCTTAGCTTTCTGTTGCACTTTTTCTCCTaGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACT +
Preference number: 1 (lower is better)
Translates to: KLFLAVLSFLLHFFS*FNDLHLFRHFSPST
Trigger: AGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAAGGACTGCTAGGAAGAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR GCA 90 bp TTAAATCTTGGTGAAAACAAATCCTTGGATAAAGAAAATGCCCAGTaGCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCA +
Preference number: 1 (lower is better)
Translates to: LNLGENKSLDKENAQ*HIKEREREKARPEP
Trigger: TGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGGGCATTTTCTTTATCCAAGGATTTGTTTTCACCAAGATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CAA 90 bp AGACATTTCAGCCCGTCAACTAGACCAGAGAGTTTGGAGACGCTTTaGCTCTCAAAACTTTCCAACCACTGTGCCTTCTCACCCACAATC +
Preference number: 2 (lower is better)
Translates to: RHFSPSTRPESLETL*LSKLSNHCAFSPTI
Trigger: GATTGTGGGTGAGAAGGCACAGTGGTTGGAAAGTTTTGAGAGCAAAAGCGTCTCCAAACTCTCTGGTCTAGTTGACGGGCTGAAATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTATAGATGTATAAAATaGAAGCCCATAGCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCYRCIK*KPIASP
Trigger: GGGGCTGGCTATGGGCTTTCATTTTATACATCTATA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCCACCCACTTCAGGTTaGGTTTATGAAGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: PVPHKGERERESKTRTKFPPTSG*VYEEGR
Trigger: TCTGCCCTCTTCATAAACTCAACCTGAAGTGGGTGG...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCATGGGCTTCTGGACTaGTATTCACCAGGGTCACAA +
Preference number: 2 (lower is better)
Translates to: PVPHKGERERESKTRTKFHGLLD*YSPGSQ
Trigger: TTGTGACCCTGGTGAATATCAGTCCAGAAGCCCATG...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTGCAAAACAATGTGCTaGCTCAGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTCKTMC*LSVCVC
Trigger: ACACACACACACACTGAGGCAGCACATTGTTTTGCA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCCTTCTTCATCTGTCATaGCTGAAACTAAGGACTCCA +
Preference number: 2 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLLHLS*LKLRTP
Trigger: TGGAGTCCTTAGTTTCAGTCATGACAGATGAAGAAG...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTGCAAAACAATGTGCTaGCTCAGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCCKTMC*LSVCVC
Trigger: ACACACACACACACTGAGGCAGCACATTGTTTTGCA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CAA 90 bp TTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGACCAGAGAGTTaGGAGACGCTTTTGCTCTCAAAACTTTCCAACCACTGTGCCTTC +
Preference number: 2 (lower is better)
Translates to: LHLFRHFSPSTRPES*ETLLLSKLSNHCAF
Trigger: GAAGGCACAGTGGTTGGAAAGTTTTGAGAGCAAAAGCGTCTCCAAACTCTCTGGTCTAGTTGACGGGCTGAAATGTCTAAACAAATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCGCAGATAAGCCCAGATaGCTAGAAGCAATTTCCATT +
Preference number: 2 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCADKPR*LEAISI
Trigger: AATGGAAATTGCTTCTAGTCATCTGGGCTTATCTGC...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTGCAAAGGAGACAAATaGAGTTCATGGGCTTCTGGA +
Preference number: 2 (lower is better)
Translates to: PVPHKGERERESKTRTKFCKGDK*SSWASG
Trigger: TCCAGAAGCCCATGAACTGCATTTGTCTCCTTTGCA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGGTAGTCTCCTGGCTTTaGGCTCCAGGGAAAATTCAC +
Preference number: 2 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMVVSWL*APGKIH
Trigger: GTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTAC...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTGCAGATAAGCCCAGATaGCTAGAAGCAATTTCCATT +
Preference number: 2 (lower is better)
Translates to: ILCGVTCRETNAKETNAVADKPR*LEAISI
Trigger: AATGGAAATTGCTTCTAGTCATCTGGGCTTATCTGC...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTACCCCAAAACCAAAGTaGGGTAGAAATAGCATGAGA +
Preference number: 2 (lower is better)
Translates to: PVPHKGERERESKTRTKFTPKPK*GRNSMR
Trigger: TCTCATGCTATTTCTACCTCACTTTGGTTTTGGGGT...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGTTTGGAGACGCTTTTaGTCTCAAAACTTTCCAACC +
Preference number: 2 (lower is better)
Translates to: PVPHKGERERESKTRTKFVWRRF*SQNFPT
Trigger: GGTTGGAAAGTTTTGAGAGCAAAAGCGTCTCCAAAC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGGTAGTCTCCTGGCTTTaGGCTCCAGGGAAAATTCAC +
Preference number: 2 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKVVSWL*APGKIH
Trigger: GTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTAC...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CAA 90 bp ATATTCATCCATTCTTTTACAGAGTTGTTGCTCCCCTCATATAAATaGACTGAGGAGCCGCAACCTTTAGCTCCTACCATCTTCCTCCTA +
Preference number: 2 (lower is better)
Translates to: IFIHSFTELLLPSYK*TEEPQPLAPTIFLL
Trigger: TAGGAGGAAGATGGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAACTCTGTAAAAGAATGGATGAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CAA 90 bp CTTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTaGTTTAGACATTTCAGCCCGTCAACTAGACCAGAGAGTTTGGAG +
Preference number: 2 (lower is better)
Translates to: LSFLLHFFSWFNDLH*FRHFSPSTRPESLE
Trigger: CTCCAAACTCTCTGGTCTAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CAA 90 bp TGTATATTCTTAAGAGTTCTTGAATACATAAAGCAGGGCATGACCTaGCAGTCCCAGCTATTTCAGAGGCTAAGGCAGGATGGAACACTT +
Preference number: 2 (lower is better)
Translates to: CIFLRVLEYIKQGMT*QSQLFQRLRQDGTL
Trigger: AAGTGTTCCATCCTGCCTTAGCCTCTGAAATAGCTGGGACTGCAAGGTCATGCCCTGCTTTATGTATTCAAGAACTCTTAAGAATATACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCCACCCACTTCAGGTTaGGTTTATGAAGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDPPTSG*VYEEGR
Trigger: TCTGCCCTCTTCATAAACTCAACCTGAAGTGGGTGG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACCACCCACTTCAGGTTaGGTTTATGAAGAGGGCAGA +
Preference number: 2 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSPPTSG*VYEEGR
Trigger: TCTGCCCTCTTCATAAACTCAACCTGAAGTGGGTGG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACAGGACTCCATCGCTCTaGCCAAATCATCTGCCATGT +
Preference number: 2 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDRTPSL*PNHLPC
Trigger: ACATGGCAGATGATTTGGGCAGAGCGATGGAGTCCT...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGAGGACTCCATCGCTCTaGCCAAATCATCTGCCATGT +
Preference number: 2 (lower is better)
Translates to: VESLKLETSGALDNILVWRTPSL*PNHLPC
Trigger: ACATGGCAGATGATTTGGGCAGAGCGATGGAGTCCT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTGCAAAACAATGTGCTaGCTCAGTGTGTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: CHIKEREREKARPEPNFNCKTMC*LSVCVC
Trigger: ACACACACACACACTGAGGCAGCACATTGTTTTGCA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACAGTTCATGGGCTTCTaGACTGATATTCACCAGGGT +
Preference number: 2 (lower is better)
Translates to: FSPGSMTCICLDISARQLQFMGF*TDIHQG
Trigger: ACCCTGGTGAATATCAGTCCAGAAGCCCATGAACTG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGCTCAAAAGAGCAATATaGAGCAGTCATTTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKLKRAI*SSHLVG
Trigger: CCCCACCAAATGACTGCTTCATATTGCTCTTTTGAG...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACTCAAAAGAGCAATATaGAGCAGTCATTTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: FSPGSMTCICLDISARQLLKRAI*SSHLVG
Trigger: CCCCACCAAATGACTGCTTCATATTGCTCTTTTGAG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTTCAGGTTGAGTTTATaGAGAGGGCAGAACAATTTA +
Preference number: 2 (lower is better)
Translates to: ILCGVTCRETNAKETNAVFRLSL*RGQNNL
Trigger: TAAATTGTTCTGCCCTCTTCATAAACTCAACCTGAA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTTCAGGTTGAGTTTATaGAGAGGGCAGAACAATTTA +
Preference number: 2 (lower is better)
Translates to: PVPHKGERERESKTRTKFFRLSL*RGQNNL
Trigger: TAAATTGTTCTGCCCTCTTCATAAACTCAACCTGAA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATACCCCAAAACCAAAGTaGGGTAGAAATAGCATGAGA +
Preference number: 2 (lower is better)
Translates to: CHIKEREREKARPEPNFNTPKPK*GRNSMR
Trigger: TCTCATGCTATTTCTACCTCACTTTGGTTTTGGGGT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTTGCAGGGAAACCAATaGAAAGGAGACAAATGCAGT +
Preference number: 2 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMLQGNQ*KGDKCS
Trigger: ACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTAGTCTCCTGGCTTTaGGCTCCAGGGAAAATTCAC +
Preference number: 2 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVVVSWL*APGKIH
Trigger: GTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTAC...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGGGTCACAATGTGATTaGGTTACTTTCTTAACAGTA +
Preference number: 2 (lower is better)
Translates to: PVPHKGERERESKTRTKFGSQCD*VTFLTV
Trigger: TACTGTTAAGAAAGTAACCCAATCACATTGTGACCC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCTGTGTGGAGTTACTTaGAGGGAAACCAATGCAAAG +
Preference number: 2 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLCGVT*RETNAK
Trigger: CTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGCTTCCTCCTACTGTCTaGGAGTTAAAAATGTCATCT +
Preference number: 2 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMLPPTV*ELKMSS
Trigger: AGATGACATTTTTAACTCCCAGACAGTAGGAGGAAG...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCAGTTCATGGGCTTCTaGACTGATATTCACCAGGGT +
Preference number: 2 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFQFMGF*TDIHQG
Trigger: ACCCTGGTGAATATCAGTCCAGAAGCCCATGAACTG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACTAGACCAGAGAGTTTaGAGACGCTTTTGCTCTCAA +
Preference number: 2 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSLDQRV*RRFCSQ
Trigger: TTGAGAGCAAAAGCGTCTCCAAACTCTCTGGTCTAG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCTAAGAAGAAGAAACTaGCATGAGAGGAGTAAAGCT +
Preference number: 2 (lower is better)
Translates to: CHIKEREREKARPEPNFNLRRRN*HERSKA
Trigger: AGCTTTACTCCTCTCATGCCAGTTTCTTCTTCTTAG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCTTCTTCATCTGTCATaGCTGAAACTAAGGACTCCA +
Preference number: 2 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLLHLS*LKLRTP
Trigger: TGGAGTCCTTAGTTTCAGTCATGACAGATGAAGAAG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGCTCAAAAGAGCAATATaGAGCAGTCATTTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVLKRAI*SSHLVG
Trigger: CCCCACCAAATGACTGCTTCATATTGCTCTTTTGAG...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTATAGATGTATAAAATaGAAGCCCATAGCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDYRCIK*KPIASP
Trigger: GGGGCTGGCTATGGGCTTTCATTTTATACATCTATA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCACCCCAAAACCAAAGTaGGGTAGAAATAGCATGAGA +
Preference number: 2 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLTPKPK*GRNSMR
Trigger: TCTCATGCTATTTCTACCTCACTTTGGTTTTGGGGT...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTGCAAAGGAGACAAATaGAGTTCATGGGCTTCTGGA +
Preference number: 2 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFCKGDK*SSWASG
Trigger: TCCAGAAGCCCATGAACTGCATTTGTCTCCTTTGCA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCATTGCAGGGAAACCAATaGAAAGGAGACAAATGCAGT +
Preference number: 2 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSLQGNQ*KGDKCS
Trigger: ACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAA...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCGTTTGGAGACGCTTTTaGTCTCAAAACTTTCCAACC +
Preference number: 2 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLVWRRF*SQNFPT
Trigger: GGTTGGAAAGTTTTGAGAGCAAAAGCGTCTCCAAAC...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGATTTCCATTAGGAAGTaGCAAGAACATTTGAAGAAG +
Preference number: 2 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQISIRK*QEHLKK
Trigger: CTTCTTCAAATGTTCTTGCCACTTCCTAATGGAAAT...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGGTGAAAACAAATCCTTaGATAAAGAAAATGCCCAGT +
Preference number: 2 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQVKTNP*IKKMPS
Trigger: ACTGGGCATTTTCTTTATCCAAGGATTTGTTTTCAC...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTATAGATGTATAAAATaGAAGCCCATAGCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFYRCIK*KPIASP
Trigger: GGGGCTGGCTATGGGCTTTCATTTTATACATCTATA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACTTCCTCCTACTGTCTaGGAGTTAAAAATGTCATCT +
Preference number: 2 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSLPPTV*ELKMSS
Trigger: AGATGACATTTTTAACTCCCAGACAGTAGGAGGAAG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGGGTCACAATGTGATTaGGTTACTTTCTTAACAGTA +
Preference number: 2 (lower is better)
Translates to: FSPGSMTCICLDISARQLGSQCD*VTFLTV
Trigger: TACTGTTAAGAAAGTAACCCAATCACATTGTGACCC...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGATTTCCATTAGGAAGTaGCAAGAACATTTGAAGAAG +
Preference number: 2 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKISIRK*QEHLKK
Trigger: CTTCTTCAAATGTTCTTGCCACTTCCTAATGGAAAT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCCAACAGTAGGAAGTTaGATATATCAGCCAACAAAT +
Preference number: 2 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFPTVGS*IYQPTN
Trigger: ATTTGTTGGCTGATATATTCAACTTCCTACTGTTGG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTTCAGGTTGAGTTTATaGAGAGGGCAGAACAATTTA +
Preference number: 2 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFFRLSL*RGQNNL
Trigger: TAAATTGTTCTGCCCTCTTCATAAACTCAACCTGAA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGACAATGATGATACATaGCATGTGATGATTATGCTT +
Preference number: 2 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSDNDDT*HVMIML
Trigger: AAGCATAATCATCACATGGCATGTATCATCATTGTC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR GCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCGACAATGATGATACATaGCATGTGATGATTATGCTT +
Preference number: 2 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLDNDDT*HVMIML
Trigger: AAGCATAATCATCACATGGCATGTATCATCATTGTC...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR CCA 72 bp AGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTTaGGCTCCAGGGAAAATTCACTCTTGCCCAAGCAGA +
Preference number: 3 (lower is better)
Translates to: RQYFSVAVVSWL*APGKIHSCPSR
Trigger: TCTGCTTGGGCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAAATATTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCAGGGAAAATTCACTCTaGCCCAAGCAGATAAGCCCA +
Preference number: 3 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTRENSL*PKQISP
Trigger: TGGGCTTATCTGCTTGGGCAAGAGTGAATTTTCCCT...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGGGAAAATTCACTCTaGCCCAAGCAGATAAGCCCA +
Preference number: 3 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCRENSL*PKQISP
Trigger: TGGGCTTATCTGCTTGGGCAAGAGTGAATTTTCCCT...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CCA 72 bp CCAATGCAAAGGAGACAAATGCAGTTCATGGGCTTCTaGACTGATATTCACCAGGGTCACAATGTGATTGGG +
Preference number: 3 (lower is better)
Translates to: PMQRRQMQFMGF*TDIHQGHNVIG
Trigger: CCCAATCACATTGTGACCCTGGTGAATATCAGTCCAGAAGCCCATGAACTGCATTTGTCTCCTTTGCATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR TCA 72 bp GCAAAGGAGACAAATGCAGTTCATGGGCTTCTGGACTaGTATTCACCAGGGTCACAATGTGATTGGGTTACT +
Preference number: 3 (lower is better)
Translates to: AKETNAVHGLLD*YSPGSQCDWVT
Trigger: AGTAACCCAATCACATTGTGACCCTGGTGAATATCAGTCCAGAAGCCCATGAACTGCATTTGTCTCCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR TCA 72 bp CATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATaGTCATTCATCTATCCTCTCCCCTCAACAGTCCCC +
Preference number: 3 (lower is better)
Translates to: HIIVPCSNSFSL*SFIYPLPSTVP
Trigger: GGGGACTGTTGAGGGGAGAGGATAGATGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR TCA 72 bp CTCCATGACTGCAATTACAGTTCTCCTATGGTGAGATaGAAGGCAGAAGAATCCCTAAAAGCTTGCAGGACA +
Preference number: 3 (lower is better)
Translates to: LHDCNYSSPMVR*KAEESLKACRT
Trigger: TGTCCTGCAAGCTTTTAGGGATTCTTCTGCCTTTCATCTCACCATAGGAGAACTGTAATTGCAGTCATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR CCA 72 bp AAGCATGATTCCCTGAGTTTAAATCCCCAAGATACATaGAAAGCCTGGTGTAGGTACTCCATGACTGCAATT +
Preference number: 3 (lower is better)
Translates to: KHDSLSLNPQDT*KAWCRYSMTAI
Trigger: AATTGCAGTCATGGAGTACCTACACCAGGCTTTCCATGTATCTTGGGGATTTAAACTCAGGGAATCATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR CAA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCCCAACAGTAGGAAGTaGAATATATCAGCCAACAAA +
Preference number: 3 (lower is better)
Translates to: PVPHKGERERESKTRTKFPNSRK*NISANK
Trigger: TTTGTTGGCTGATATATTCAACTTCCTACTGTTGGG...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CAA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGGTCCTTAGCTTTCTGTaGCACTTTTTCTCCTGGTTC +
Preference number: 3 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMVLSFL*HFFSWF
Trigger: GAACCAGGAGAAAAAGTGCAACAGAAAGCTAAGGAC...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR TCA 72 bp TGGGCTTCTGGACTGATATTCACCAGGGTCACAATGTaGTTGGGTTACTTTCTTAACAGTAATCCTAAGTCT +
Preference number: 3 (lower is better)
Translates to: WASGLIFTRVTM*LGYFLNSNPKS
Trigger: AGACTTAGGATTACTGTTAAGAAAGTAACCCAATCACATTGTGACCCTGGTGAATATCAGTCCAGAAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR GCA 72 bp GGTGAAAACAAATCCTTGGATAAAGAAAATGCCCAGTaGCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGA +
Preference number: 3 (lower is better)
Translates to: GENKSLDKENAQ*HIKEREREKAR
Trigger: TCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGGGCATTTTCTTTATCCAAGGATTTGTTTTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCTCCCCTCATATAAATaGACTGAGGAGCCGCAACCT +
Preference number: 3 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFLPSYK*TEEPQP
Trigger: AGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCATTCTTTTACAGAGTaGTTGCTCCCCTCATATAAA +
Preference number: 3 (lower is better)
Translates to: ILCGVTCRETNAKETNAVHSFTE*LLPSYK
Trigger: TTTATATGAGGGGAGCAACAACTCTGTAAAAGAATG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGTCCTGGTTCAATGACTaGCATTTGTTTAGACATTTC +
Preference number: 3 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQSWFND*HLFRHF
Trigger: GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGA...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR TCA 72 bp ACATTTTGTAAATTGAAAGGGAAATATCTCCACGGATaGGATGGCTCAGTGGGTAAAGTGCTTGCCATACAA +
Preference number: 3 (lower is better)
Translates to: TFCKLKGKYLHG*DGSVGKVLAIQ
Trigger: TTGTATGGCAAGCACTTTACCCACTGAGCCATCTCATCCGTGGAGATATTTCCCTTTCAATTTACAAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR CCA 72 bp CTAGCAGTCCTTAGCTTTCTGTTGCACTTTTTCTCCTaGTTCAATGACTTGCATTTGTTTAGACATTTCAGC +
Preference number: 3 (lower is better)
Translates to: LAVLSFLLHFFS*FNDLHLFRHFS
Trigger: GCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAAGGACTGCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTCCTGGTTCAATGACTaGCATTTGTTTAGACATTTC +
Preference number: 3 (lower is better)
Translates to: CHIKEREREKARPEPNFNSWFND*HLFRHF
Trigger: GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR GCA 72 bp GTGTCAGAAATAATGGCTTTCATTATGACACTGTCATaGATACATATCATTGTGCCTTGCTCAAATTCCTTC +
Preference number: 3 (lower is better)
Translates to: VSEIMAFIMTLS*IHIIVPCSNSF
Trigger: GAAGGAATTTGAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATTTCTGACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCCCAACAGTAGGAAGTaGAATATATCAGCCAACAAA +
Preference number: 3 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFPNSRK*NISANK
Trigger: TTTGTTGGCTGATATATTCAACTTCCTACTGTTGGG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR-3UTR CAA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCATCCTGGTTCAATGACTaGCATTTGTTTAGACATTTC +
Preference number: 3 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSSWFND*HLFRHF
Trigger: GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGA...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR TCA 72 bp AACAACAACAAAACCACCCACTTCAGGTTGAGTTTATaGAGAGGGCAGAACAATTTAGTTGTAATTATAGAG +
Preference number: 3 (lower is better)
Translates to: NNNKTTHFRLSL*RGQNNLVVIIE
Trigger: CTCTATAATTACAACTAAATTGTTCTGCCCTCTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAGCTTCAGCCTGGGGCTaGTCCAGGAGCTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAASAWG*SRSCLS
Trigger: ACTGAGACAGCTCCTGGAGCAGCCCCAGGCTGAAGC...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCGCATCCCTGGGACTCTaGGGAGAGGTGGGCATCATC +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCASLGL*GEVGII
Trigger: GATGATGCCCACCTCTCCTCAGAGTCCCAGGGATGC...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAAGCCACACCATAGACTaGGGTTCCAGGCGCATCCAG +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRASHTID*GSRRIQ
Trigger: CTGGATGCGCCTGGAACCCCAGTCTATGGTGTGGCT...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTCATCGTGTGAAAGCTaGGGGGACGAGGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCSSCES*GDEAGA
Trigger: TGCGCCTGCCTCGTCCCCCCAGCTTTCACACGATGA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR CAA 72 bp TCTCCCTGTGGCTGGCCCAAGACTCCTTACATAGACTaGGCTGGTCTTGACTTTAAGGTGACCCTCCCGCCT +
Preference number: 4 (lower is better)
Translates to: SPCGWPKTPYID*AGLDFKVTLPP
Trigger: AGGCGGGAGGGTCACCTTAAAGTCAAGACCAGCCAAGTCTATGTAAGGAGTCTTGGGCCAGCCACAGGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAGTTCTGACAACAGCTTaGCGCTGCCCAATGCCATCC +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAVLTTA*RCPMPS
Trigger: GGATGGCATTGGGCAGCGTCAAGCTGTTGTCAGAAC...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCGCTGGTCATTTTGCTTaGGGTTGTGCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCAGHFA*GCAGPG
Trigger: CCCTGGACCAGCACAACCTCAAGCAAAATGACCAGC...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCCTCTCCCAGGGACCCTaGACTGAAGTGGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCLSQGP*TEVERK
Trigger: CTTCCTTTCCACTTCAGTTCAGGGTCCCTGGGAGAG...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGCAGCAGCCACTCTGTaGAAGACGGGCAGCCACACC +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLAAATL*KTGSHT
Trigger: GGTGTGGCTGCCCGTCTTGCACAGAGTGGCTGCTGC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCGCAGCAGCCACTCTGTaGAAGACGGGCAGCCACACC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCAAATL*KTGSHT
Trigger: GGTGTGGCTGCCCGTCTTGCACAGAGTGGCTGCTGC...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCACCTGTGCTTGTGTCCTaGGGAGGACTCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAPVLVS*GGLRRS
Trigger: AGATCTTCTGAGTCCTCCCCAGGACACAAGCACAGG...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTCATCGTGTGAAAGCTaGGGGGACGAGGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTSSCES*GDEAGA
Trigger: TGCGCCTGCCTCGTCCCCCCAGCTTTCACACGATGA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATTGCATTCAGTGTTCTaGCAACAGCTTGACGCTGCC +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRALHSVF*QQLDAA
Trigger: GGCAGCGTCAAGCTGTTGTCAGAACACTGAATGCAA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTGTCCCATTCAGCGTTaGCCTCTTCAGCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCCPIQR*PLQPAF
Trigger: GAAAGCAGGCTGAAGAGGTCAACGCTGAATGGGACA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATCATCGGCAGCTTCCTaGAGTTCCTGGAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRASSAAS*SSWSLS
Trigger: TGAAAGACTCCAGGAACTTCAGGAAGCTGCCGATGA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCCTGAGTTGGCTCCACTaGCATTGCGGCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLSWLH*HCGPIL
Trigger: GAGAATGGGGCCGCAATGGCAGTGGAGCCAACTCAG...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAACTTGGCTTGATGCTTaGCAGTTTCAGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRATWLDA*QFQQQP
Trigger: TGGCTGCTGCTGAAACTGCCAAGCATCAAGCCAAGT...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCAGGAGGAGATGGCAGTaGAGACAGGCCTTTATGCTC +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCRRRWQ*RQAFML
Trigger: GAGCATAAAGGCCTGTCTCCACTGCCATCTCCTCCT...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCCCTGTGCTTGTGTCCTaGGGAGGACTCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCPVLVS*GGLRRS
Trigger: AGATCTTCTGAGTCCTCCCCAGGACACAAGCACAGG...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATGTGTCCTCTCTCATTaGCTTTCCGGGGGCATTTCT +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRACVLSH*LSGGIS
Trigger: AGAAATGCCCCCGGAAAGCCAATGAGAGAGGACACA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCGAGGAGATCCCCCACTaGCTGCCAGGATCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTEEIPH*LPGSLD
Trigger: ATCAAGGGATCCTGGCAGCCAGTGGGGGATCTCCTC...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCACACAGAGAGGGACATTaGCCAGATTGTTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAHREGH*PDCCAL
Trigger: AAGAGCACAACAATCTGGTCAATGTCCCTCTCTGTG...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGCATCCCTGGGACTCTaGGGAGAGGTGGGCATCATC +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFASLGL*GEVGII
Trigger: GATGATGCCCACCTCTCCTCAGAGTCCCAGGGATGC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTCGGAGCAGCATAGGCTaGCTGCTATCTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLRSSIG*LLSDLC
Trigger: GCAGAGGTCAGATAGCAGTCAGCCTATGCTGCTCCG...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCACTCACCCATAGATTCTaGAGTTTGACTGCCAACCAC +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRALTHRF*SLTANH
Trigger: GTGGTTGGCAGTCAAACTTCAGAATCTATGGGTGAG...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATGGATAATTACGTGTTaGCTGTCGAACCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAWIITC*LSNPAQ
Trigger: CTGAGCTGGGTTCGACAGTCAACACGTAATTATCCA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAGCTGAGGGTGGAGCGTaGGCTATTACACTATTTACA +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAAEGGA*AITLFT
Trigger: TGTAAATAGTGTAATAGCTCACGCTCCACCCTCAGC...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTCTCTGCCAATCAGCTaGGCGCAGGTTCAATTTGTC +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCSLPIS*AQVQFV
Trigger: GACAAATTGAACCTGCGCTCAGCTGATTGGCAGAGA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTGCTGCCAGGATCCCTTaGTCACCTCAGCTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVAARIP*SPQLGA
Trigger: TGCGCCAAGCTGAGGTGATCAAGGGATCCTGGCAGC...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATCGGCTCAATGTTACTaGCCCCAAAGGAAGCAACTT +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRASAQCY*PQRKQL
Trigger: AAGTTGCTTCCTTTGGGGGCAGTAACATTGAGCCGA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAATTCTGAAGTTTGACTaGCAACCACTCGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAILKFD*QPLGAA
Trigger: TGCTGCTCCGAGTGGTTGGCAGTCAAACTTCAGAAT...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTAGATCCCCCACTGGCTaGCAGGATCCCTTGATCACC +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLRSPTG*QDPLIT
Trigger: GGTGATCAAGGGATCCTGGCAGCCAGTGGGGGATCT...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCGTGTGGAATCAGAGGTaGCAACATAAGCAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCVWNQR*QHKQPV
Trigger: CACAGGCTGCTTATGTTGCCACCTCTGATTCCACAC...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATGTGGAGTCCACCTTTaGGCGCATGTCATTCATTTC +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRACGVHL*AHVIHF
Trigger: GAAATGAATGACATGCGCCCAAAGGTGGACTCCACA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTTGATCACCTCAGCTTaGCGCAACTTGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCLITSA*RNLRSS
Trigger: ACTGGACCTCAAGTTGCGCCAAGCTGAGGTGATCAA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCGAGGAGATCCCCCACTaGCTGCCAGGATCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCEEIPH*LPGSLD
Trigger: ATCAAGGGATCCTGGCAGCCAGTGGGGGATCTCCTC...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTCATCGTGTGAAAGCTaGGGGGACGAGGCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVSSCES*GDEAGA
Trigger: TGCGCCTGCCTCGTCCCCCCAGCTTTCACACGATGA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGCTGGTCATTTTGCTTaGGGTTGTGCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLAGHFA*GCAGPG
Trigger: CCCTGGACCAGCACAACCTCAAGCAAAATGACCAGC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCCTGCAAATCGACGGTTaGGCTCAGAGATTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLQIDG*AQRFGA
Trigger: AGCCCCAAATCTCTGAGCTCAACCGTCGATTTGCAG...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGCCGCCAGCGCTTGCTaGGCTGGATCTGAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNAASAC*AGSELA
Trigger: AGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAGATCTTCCAAAGTGCTaGGGTTATAAGGTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRADLPKC*GYKVRA
Trigger: AGCTCTCACCTTATAACCTCAGCACTTTGGAAGATC...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCCAGGGACCCTGAACTaGAGTGGAAAGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCPGTLN*SGKEVL
Trigger: CAGCACTTCCTTTCCACTTCAGTTCAGGGTCCCTGG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTTTTGCTTGAGGTTGTaGTGGTCCAGGGCATCACAT +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCFCLRL*WSRASH
Trigger: ATGTGATGCCCTGGACCAGCACAACCTCAAGCAAAA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCGGAGACAGGCCTTTATaGTCATGCTGCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTGDRPL*SCCCFR
Trigger: CCTGAAGCAGCAGCATGAGCATAAAGGCCTGTCTCC...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTGGTCTTCCAGGATTTaGATCCTGGCTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTWSSRI*ILASRR
Trigger: ACGCCTGGAAGCCAGGATGCAAATCCTGGAAGACCA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCCTTCTTCTAACCCTGTaGTTGTGTCCTGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLLLTL*LCPGED
Trigger: GTCCTCCCCAGGACACAAGCACAGGGTTAGAAGAAG...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTTTCTGCCAGCTCTTTaGAGATGTCGTGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTFLPAL*RCRATA
Trigger: TGCGGTGGCACGACATCTGCAAAGAGCTGGCAGAAA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTCCCTGTGGGCTTCATaGAGCTGTCTGACACGGTCC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVSLWAS*SCLTRS
Trigger: GGACCGTGTCAGACAGCTGCATGAAGCCCACAGGGA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTAGCCACACCATAGACTaGGGTTCCAGGCGCATCCAG +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVSHTID*GSRRIQ
Trigger: CTGGATGCGCCTGGAACCCCAGTCTATGGTGTGGCT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGGCATCCCTGGGACTCTaGGGAGAGGTGGGCATCATC +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMASLGL*GEVGII
Trigger: GATGATGCCCACCTCTCCTCAGAGTCCCAGGGATGC...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTAGGCTGACTGCTATCTaGCCTCTGCAGAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFRLTAI*PLQRGG
Trigger: TCCACCTCTCTGCAGAGGTCAGATAGCAGTCAGCCT...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAGTAACACTCTTCAAGTaGGCCTTCTGTTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAVTLFK*AFCFSI
Trigger: GATTGAGAAACAGAAGGCTCACTTGAAGAGTGTTAC...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCTGCAAATCGACGGTTaGGCTCAGAGATTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCLQIDG*AQRFGA
Trigger: AGCCCCAAATCTCTGAGCTCAACCGTCGATTTGCAG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGCCGCCAGCGCTTGCTaGGCTGGATCTGAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLAASAC*AGSELA
Trigger: AGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGC...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTAGCCACAGAAGCAGGTaGTCCAGCTGCTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFSHRSR*SSCSSS
Trigger: GCTTGAAGAGCAGCTGGATCACCTGCTTCTGTGGCT...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTAGCCACAGAAGCAGGTaGTCCAGCTGCTCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVSHRSR*SSCSSS
Trigger: GCTTGAAGAGCAGCTGGATCACCTGCTTCTGTGGCT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGCCGAGTGACATTCTaGGCTCTTTCTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCSRVTF*ALSSGG
Trigger: GCCTCCTGAAGAAAGAGCTCAGAATGTCACTCGGCT...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGGGGCACTTTGTTTGGTaGGATGGCTCTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQGHFVW*DGSLPG
Trigger: CCCTGGGAGAGAGCCATCTCACCAAACAAAGTGCCC...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGGCAGCAGCCACTCTGTaGAAGACGGGCAGCCACACC +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKAAATL*KTGSHT
Trigger: GGTGTGGCTGCCCGTCTTGCACAGAGTGGCTGCTGC...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGGAGACAGGCCTTTATaGTCATGCTGCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLGDRPL*SCCCFR
Trigger: CCTGAAGCAGCAGCATGAGCATAAAGGCCTGTCTCC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCTTCTTCTAACCCTGTaGTTGTGTCCTGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCLLLTL*LCPGED
Trigger: GTCCTCCCCAGGACACAAGCACAGGGTTAGAAGAAG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTTGACCTCTTCAGCCTaGTTTCGTAGGAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCLTSSA*FRRSRV
Trigger: CACTCGGCTCCTACGAAAGCAGGCTGAAGAGGTCAA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCAAGGTGAGAGCTGAATaGCCAGTGTGGTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTKVRAE*PVWSAD
Trigger: ATCAGCTGACCACACTGGGCATTCAGCTCTCACCTT...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGTCCCTGTGGGCTTCATaGAGCTGTCTGACACGGTCC +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQSLWAS*SCLTRS
Trigger: GGACCGTGTCAGACAGCTGCATGAAGCCCACAGGGA...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCAAGCAAAGGGCCTTCTaGAGCCTTCTGAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTKQRAF*SLLSFM
Trigger: CATGAAGCTCAGAAGGCTCCAGAAGGCCCTTTGCTT...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATGCAATACTCTACCATaGGGTAGTGCATTTTATGGC +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRACNTLP*GSAFYG
Trigger: GCCATAAAATGCACTACCCCATGGTAGAGTATTGCA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCAAGGAAATCAAGATCTaGGCAGGACTACGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTKEIKI*AGLRGW
Trigger: CCAGCCTCGTAGTCCTGCCCAGATCTTGATTTCCTT...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTGTGAAAGAACCCTTTaGTTGGCATCCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTCERTL*LASFPW
Trigger: CCAGGGGAAGGATGCCAACCAAAGGGTTCTTTCACA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTTGAGCTCAGAGATTTaGGGCTCTACTACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCLSSEI*GSTTFL
Trigger: CAGGAAAGTAGTAGAGCCCCAAATCTCTGAGCTCAA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTCTGCTTCTGAACTGCTaGGAAATCACCACCGATGGG +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLLLLNC*EITTDG
Trigger: CCCATCGGTGGTGATTTCCCAGCAGTTCAGAAGCAG...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGTGGAAAGGAAGTGCTaGGATGCAGGACCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLVERKC*DAGPKS
Trigger: GGACTTTGGTCCTGCATCCCAGCACTTCCTTTCCAC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR CAA 72 bp AGCCCGTCAACTAGACCAGAGAGTTTGGAGACGCTTTaGCTCTCAAAACTTTCCAACCACTGTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SPSTRPESLETL*LSKLSNHCAFS
Trigger: TGAGAAGGCACAGTGGTTGGAAAGTTTTGAGAGCAAAAGCGTCTCCAAACTCTCTGGTCTAGTTGACGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CAA 72 bp TATGGTGAGATGAAAGGCAGAAGAATCCCTAAAAGCTaGCAGGACACCCCACCTGGCATCCAAAGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: YGEMKGRRIPKS*QDTPPGIQSGE
Trigger: TTCACCACTTTGGATGCCAGGTGGGGTGTCCTGCAAGCTTTTAGGGATTCTTCTGCCTTTCATCTCACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGAGGCTGACTGCTATCTaGCCTCTGCAGAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQRLTAI*PLQRGG
Trigger: TCCACCTCTCTGCAGAGGTCAGATAGCAGTCAGCCT...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGCGGAGCAGCATAGGCTaGCTGCTATCTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMRSSIG*LLSDLC
Trigger: GCAGAGGTCAGATAGCAGTCAGCCTATGCTGCTCCG...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCACGAGTAATCCAACTGTaGAGTTCAGTTATATCGACA +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRARVIQL*SSVIST
Trigger: TGTCGATATAACTGAACTTCACAGTTGGATTACTCG...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCCTTCTACTCTGGAGGTaGCAGCTATCCAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLLLWR*QLSSYC
Trigger: ACAGTAACTGGATAGCTGTCACCTCCAGAGTAGAAG...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTTGCTGAGCTGGATCTaGGTTGGCTCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFLLSWI*VGSTAI
Trigger: AATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATCCTTGTACATTCTATaGAGTTTTTCCCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRASLYIL*SFSPWK
Trigger: TTTCCAGGGGGAAAAACTTCATAGAATGTACAAGGA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTACACTTATCTGCCGTTaGCGGAGGTCTTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVTLICR*RRSLAN
Trigger: GTTGGCCAAAGACCTCCGTCAACGGCAGATAAGTGT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGTTTCATCAGCTCTCTaGCTCCCCTGGAGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLVSSAL*LPWSLL
Trigger: TAGAAGACTCCAGGGGAGTCAGAGAGCTGATGAAAC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTGGTCTTCCAGGATTTaGATCCTGGCTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFWSSRI*ILASRR
Trigger: ACGCCTGGAAGCCAGGATGCAAATCCTGGAAGACCA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCTGCTATCTGACCTCTaGAGAGAGGTGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVLLSDL*REVEGE
Trigger: CTCTCCTTCCACCTCTCTGCAGAGGTCAGATAGCAG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGTTGAAGTCTGCCAGTaGAGGTACCTCCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLVEVCQ*RYLQQQ
Trigger: TTGCTGTTGGAGGTACCTGCACTGGCAGACTTCAAC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCGATCTTCTTTTGGATTaGATCTACTGTGTGAGGACC +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCDLLLD*IYCVRT
Trigger: GGTCCTCACACAGTAGATGCAATCCAAAAGAAGATC...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATAGATCCCCCACTGGCTaGCAGGATCCCTTGATCACC +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNRSPTG*QDPLIT
Trigger: GGTGATCAAGGGATCCTGGCAGCCAGTGGGGGATCT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTAAGCAAAGGGCCTTCTaGAGCCTTCTGAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLKQRAF*SLLSFM
Trigger: CATGAAGCTCAGAAGGCTCCAGAAGGCCCTTTGCTT...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATTATTATTGGCAAATTaGAAGCAGCTCCTGACACTC +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRALLLAN*KQLLTL
Trigger: GAGTGTCAGGAGCTGCTTCCAATTTGCCAATAATAA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGAGCCACACCATAGACTaGGGTTCCAGGCGCATCCAG +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMSHTID*GSRRIQ
Trigger: CTGGATGCGCCTGGAACCCCAGTCTATGGTGTGGCT...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTAGGCGTCCTTTGTGTTaGCGCAGTAGCTTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVRRPLC*RSSLAS
Trigger: TGAGGCTAAGCTACTGCGCCAACACAAAGGACGCCT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCCTGTGCTTGTGTCCTaGGGAGGACTCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVPVLVS*GGLRRS
Trigger: AGATCTTCTGAGTCCTCCCCAGGACACAAGCACAGG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTTGTGTCCTCTCTCATTaGCTTTCCGGGGGCATTTCT +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLCVLSH*LSGGIS
Trigger: AGAAATGCCCCCGGAAAGCCAATGAGAGAGGACACA...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTGTTTTAGAATTCCCTaGCGCAGGGGCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTCFRIP*RRGNSS
Trigger: AGAAGAGTTGCCCCTGCGCCAGGGAATTCTAAAACA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCTGCTTCTGAACTGCTaGGAAATCACCACCGATGGG +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFLLLNC*EITTDG
Trigger: CCCATCGGTGGTGATTTCCCAGCAGTTCAGAAGCAG...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGACCCTGAACTGAAGTaGAAAGGAAGTGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLDPELK*KGSAGM
Trigger: CATCCCAGCACTTCCTTTCCACTTCAGTTCAGGGTC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAAAATCATCTGCCATGTaGAAAAGGCTTCCTACATTG +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAKSSAM*KRLPTL
Trigger: CAATGTAGGAAGCCTTTTCCACATGGCAGATGATTT...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS-3UTR TCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTATACGCGGAGAACCTaGCATTATTCAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTYTRRT*HYSGQL
Trigger: TAGCTGACCTGAATAATGTCAGGTTCTCCGCGTATA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGGCTGGTCATTTTGCTTaGGGTTGTGCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMAGHFA*GCAGPG
Trigger: CCCTGGACCAGCACAACCTCAAGCAAAATGACCAGC...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGCATCCCTGGGACTCTaGGGAGAGGTGGGCATCATC +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWASLGL*GEVGII
Trigger: GATGATGCCCACCTCTCCTCAGAGTCCCAGGGATGC...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCATAGATTCTGAAGTTTaGCTGCCAACCACTCGGAGC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCIDSEV*LPTTRS
Trigger: GCTCCGAGTGGTTGGCAGTCAAACTTCAGAATCTAT...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTTCTCTAGTTACTTTTaGAGATGTCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCFSSYF*RCPGQH
Trigger: ATGTTGCCCAGGACATCTTCAAAAGTAACTAGAGAA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCATTTGGGTTCTCCTCTaGATGATGCATCAGATTTTC +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCIWVLL*MMHQIF
Trigger: GAAAATCTGATGCATCATTCAGAGGAGAACCCAAAT...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTCTTCTACTCTGGAGGTaGCAGCTATCCAGTTACTGT +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLLLLWR*QLSSYC
Trigger: ACAGTAACTGGATAGCTGTCACCTCCAGAGTAGAAG...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGCTGCCAGGATCCCTTaGTCACCTCAGCTTGGCGCA +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWAARIP*SPQLGA
Trigger: TGCGCCAAGCTGAGGTGATCAAGGGATCCTGGCAGC...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTTTTTGCTTGAGGTTGTaGTGGTCCAGGGCATCACAT +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLFCLRL*WSRASH
Trigger: ATGTGATGCCCTGGACCAGCACAACCTCAAGCAAAA...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCGTTGAACTTGCCACTTaGTTGAAAAGGTATCTGTAC +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCVELAT*LKRYLY
Trigger: GTACAGATACCTTTTCAAGCAAGTGGCAAGTTCAAC...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTCGGCTCAATGTTACTaGCCCCAAAGGAAGCAACTT +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCSAQCY*PQRKQL
Trigger: AAGTTGCTTCCTTTGGGGGCAGTAACATTGAGCCGA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCGCAGCAGCCACTCTGTaGAAGACGGGCAGCCACACC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFAAATL*KTGSHT
Trigger: GGTGTGGCTGCCCGTCTTGCACAGAGTGGCTGCTGC...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGCTTCAGCCTGGGGCTaGTCCAGGAGCTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWASAWG*SRSCLS
Trigger: ACTGAGACAGCTCCTGGAGCAGCCCCAGGCTGAAGC...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACGCTTCAGCCTGGGGCTaGTCCAGGAGCTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDASAWG*SRSCLS
Trigger: ACTGAGACAGCTCCTGGAGCAGCCCCAGGCTGAAGC...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCGCTTCAGCCTGGGGCTaGTCCAGGAGCTGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLASAWG*SRSCLS
Trigger: ACTGAGACAGCTCCTGGAGCAGCCCCAGGCTGAAGC...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGGGGCCTGAGCTGATCTaGTGGCATCTTGCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQGPELI*WHLAVF
Trigger: GAAAACTGCAAGATGCCAGCAGATCAGCTCAGGCCC...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATGTGTCATCCACTCATaGATCTCTGATAGATCTTTT +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRACVIHS*ISDRSF
Trigger: AAAAGATCTATCAGAGATGCATGAGTGGATGACACA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTAGCTTGCCTGCGCACTaGATTCAGCTCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVSLPAH*IQLLFL
Trigger: AAGAAAGAGGAGCTGAATGCAGTGCGCAGGCAAGCT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACTGAGTTGGCTCCACTaGCATTGCGGCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLLSWLH*HCGPIL
Trigger: GAGAATGGGGCCGCAATGGCAGTGGAGCCAACTCAG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTAAGCAAAGGGCCTTCTaGAGCCTTCTGAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVKQRAF*SLLSFM
Trigger: CATGAAGCTCAGAAGGCTCCAGAAGGCCCTTTGCTT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTTATTATTGGCAAATTaGAAGCAGCTCCTGACACTC +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCLLLAN*KQLLTL
Trigger: GAGTGTCAGGAGCTGCTTCCAATTTGCCAATAATAA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATTTTTGACCTGCCAGTaGAGGATTATATTCCAAATC +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAFLTCQ*RIIFQI
Trigger: GATTTGGAATATAATCCTCCACTGGCAGGTCAAAAA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCAGCTTTCCACCAACTaGGAGGAAAGTTTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCQLSTN*EESFFQ
Trigger: CTGGAAGAAACTTTCCTCCCAGTTGGTGGAAAGCTG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCAAAGAACCCTTTGGTTaGCATCCTTCCCCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTKEPFG*HPSPGY
Trigger: ATAACCAGGGGAAGGATGCCAACCAAAGGGTTCTTT...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTCTCAGGTAAAGCTCTaGAGACCTTTATCCACTGGA +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTSQVKL*RPLSTG
Trigger: TCCAGTGGATAAAGGTCTCCAGAGCTTTACCTGAGA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTTGGAGATCTTGCCATaGTTTCATCAGCTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLEILP*FHQLSD
Trigger: GTCAGAGAGCTGATGAAACCATGGCAAGATCTCCAA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGGTGGAAAGGAAGTGCTaGGATGCAGGACCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQVERKC*DAGPKS
Trigger: GGACTTTGGTCCTGCATCCCAGCACTTCCTTTCCAC...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTTATACGCGGAGAACCTaGCATTATTCAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLYTRRT*HYSGQL
Trigger: TAGCTGACCTGAATAATGTCAGGTTCTCCGCGTATA...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCCTTCTGGAGCCTTCTaGGCTTCATGGCAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNPSGAF*ASWQSY
Trigger: ATAGGACTGCCATGAAGCTCAGAAGGCTCCAGAAGG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGGCATCACATGCAGCTaGCAGGCTCAAGAGATCCAA +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNGITCS*QAQEIQ
Trigger: TTGGATCTCTTGAGCCTGTCAGCTGCATGTGATGCC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCCTCAGTCTATGTAACTaGGACTCCAGCTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLSLCN*DSSCLL
Trigger: CAATAAACAGCTGGAGTCTCAGTTACATAGACTGAG...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACGGAGCAGCATAGGCTaGCTGCTATCTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSRSSIG*LLSDLC
Trigger: GCAGAGGTCAGATAGCAGTCAGCCTATGCTGCTCCG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCTCACCCATAGATTCTaGAGTTTGACTGCCAACCAC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVLTHRF*SLTANH
Trigger: GTGGTTGGCAGTCAAACTTCAGAATCTATGGGTGAG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTCTCGTGCTATGGCATTaGCTTTTTCTTGCAAGTCTG +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLLVLWH*LFLASL
Trigger: CAGACTTGCAAGAAAAAGTCAATGCCATAGCACGAG...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGCACCAGGGCCTGAGCTaGTCTGCTGGCATCTTGCAG +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVHQGLS*SAGILQ
Trigger: CTGCAAGATGCCAGCAGATCAGCTCAGGCCCTGGTG...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCCAACTGCTTGTCAATaGATTCAAGCGACTCCTGAA +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCPTACQ*IQATPE
Trigger: TTCAGGAGTCGCTTGAATTCATTGACAAGCAGTTGG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGAGATTCACCCCCTGCTaGATTTCAGCCTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMRFTPC*ISASSG
Trigger: ACCACTGGAGGCTGAAATTCAGCAGGGGGTGAATCT...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATAGATTCACCCCCTGCTaGATTTCAGCCTCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNRFTPC*ISASSG
Trigger: ACCACTGGAGGCTGAAATTCAGCAGGGGGTGAATCT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTGTCCCATTCAGCGTTaGCCTCTTCAGCCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMCPIQR*PLQPAF
Trigger: GAAAGCAGGCTGAAGAGGTCAACGCTGAATGGGACA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCAGCTTGGCGCAACTTaGGGTCCAGTTCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLQLGAT*GPVHRQ
Trigger: CTGCCGATGAACTGGACCTCAAGTTGCGCCAAGCTG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACTTGCAGAGAGTCAATaGGGAGATCCCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLLAESQ*GDPPLA
Trigger: AGCCAGTGGGGGATCTCCTCATTGACTCTCTGCAAG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGATCTTCCAAAGTGCTaGGGTTATAAGGTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLDLPKC*GYKVRA
Trigger: AGCTCTCACCTTATAACCTCAGCACTTTGGAAGATC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACCAGGGACCCTGAACTaGAGTGGAAAGGAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLPGTLN*SGKEVL
Trigger: CAGCACTTCCTTTCCACTTCAGTTCAGGGTCCCTGG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTCGGCTCAATGTTACTaGCCCCAAAGGAAGCAACTT +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFSAQCY*PQRKQL
Trigger: AAGTTGCTTCCTTTGGGGGCAGTAACATTGAGCCGA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCTGCTATCTGACCTCTaGAGAGAGGTGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNLLSDL*REVEGE
Trigger: CTCTCCTTCCACCTCTCTGCAGAGGTCAGATAGCAG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGCTGCTATCTGACCTCTaGAGAGAGGTGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMLLSDL*REVEGE
Trigger: CTCTCCTTCCACCTCTCTGCAGAGGTCAGATAGCAG...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCTTCTTCTAACCCTGTaGTTGTGTCCTGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNLLLTL*LCPGED
Trigger: GTCCTCCCCAGGACACAAGCACAGGGTTAGAAGAAG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAAGATTCATTTGTTCTTaGACTTCAGCTTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRARFICS*TSASSS
Trigger: AGATGAAGAAGCTGAAGTGCAAGAACAAATGAATCT...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTTCCAAAGCAGCTGTTaGATGATCACCGCTGGATTC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVFQSSC*MITAGF
Trigger: GAATCCAGCGGTGATCATGCAACAGCTGCTTTGGAA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCCATCTGCAGATATTTaGCCATCGATCTCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFPSADI*PSISQY
Trigger: GTACTGGGAGATCGATGGGCAAATATCTGCAGATGG...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCTGAGGCATTTGAGCTaGATCCACCTTGTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFLRHLS*IHLVSD
Trigger: ATCACTGACAAGGTGGATGCAGCTCAAATGCCTCAG...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTCTGTGAGAAATAGCTaGAAATCGACGGTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCSVRNS*KSTVEL
Trigger: GAGCTCAACCGTCGATTTGCAGCTATTTCTCACAGA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGAAACTGAGCAAAATTaGTCTCAATTTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLETEQN*SQFAAS
Trigger: GCTGGCGGCAAATTGAGAGCAATTTTGCTCAGTTTC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTTTCTGCCAGCTCTTTaGAGATGTCGTGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNFLPAL*RCRATA
Trigger: TGCGGTGGCACGACATCTGCAAAGAGCTGGCAGAAA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATAGCTCGGTTGAAGTCTaGCAGTGCAGGTACCTCCAA +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNSSVEV*QCRYLQ
Trigger: TTGGAGGTACCTGCACTGGCAGACTTCAACCGAGCT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGGTCTTTGGCCAACTaGTTGGTTTCTGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCRSLAN*LVSVIF
Trigger: GAAGATCACAGAAACCAAGCAGTTGGCCAAAGACCT...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCCGAAGAAGTTTCAGTaGCAAATCATTTGCCACGTC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCPKKFQ*QIICHV
Trigger: GACGTGGCAAATGATTTGGCACTGAAACTTCTTCGG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTTGACCTCTTCAGCCTaGTTTCGTAGGAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNLTSSA*FRRSRV
Trigger: CACTCGGCTCCTACGAAAGCAGGCTGAAGAGGTCAA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTGCTTGAGGTTGTGCTaGTCCAGGGCATCACATGCA +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMCLRLC*SRASHA
Trigger: TGCATGTGATGCCCTGGACCAGCACAACCTCAAGCA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTGCAATACTCTACCATaGGGTAGTGCATTTTATGGC +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTCNTLP*GSAFYG
Trigger: GCCATAAAATGCACTACCCCATGGTAGAGTATTGCA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATAGGCGTCCTTTGTGTTaGCGCAGTAGCTTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNRRPLC*RSSLAS
Trigger: TGAGGCTAAGCTACTGCGCCAACACAAAGGACGCCT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCCTGTGCTTGTGTCCTaGGGAGGACTCAGAAGATCT +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNPVLVS*GGLRRS
Trigger: AGATCTTCTGAGTCCTCCCCAGGACACAAGCACAGG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCGATGGACTTCTTGTCTaGATAAGTGGTAGCAACATC +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTDGLLV*ISGSNI
Trigger: GATGTTGCTACCACTTATCCAGACAAGAAGTCCATC...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTTTCCACTTCTTGAATaGCTTCAATGCTCACTTGTT +
Preference number: 4 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCFPLLE*LQCSLV
Trigger: AACAAGTGAGCATTGAAGCCATTCAAGAAGTGGAAA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTGTGGAGTCCACCTTTaGGCGCATGTCATTCATTTC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVCGVHL*AHVIHF
Trigger: GAAATGAATGACATGCGCCCAAAGGTGGACTCCACA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCTGCTTGGTCACGTGTaGAGTCCACCTTTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLLLGHV*SPPLGA
Trigger: TGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACTGCTTGGTCACGTGTaGAGTCCACCTTTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSLLGHV*SPPLGA
Trigger: TGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTGTTTTAGAATTCCCTaGCGCAGGGGCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVCFRIP*RRGNSS
Trigger: AGAAGAGTTGCCCCTGCGCCAGGGAATTCTAAAACA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGCGTCCTGTAGGACATTaGCAGTTGTTTCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQRPVGH*QLFLLP
Trigger: CGGAAGCAGAAACAACTGCCAATGTCCTACAGGACG...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGCTGGTCATTTTGCTTaGGGTTGTGCTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSAGHFA*GCAGPG
Trigger: CCCTGGACCAGCACAACCTCAAGCAAAATGACCAGC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCAACTTGCCACTTGCTTaGAAAGGTATCTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTNLPLA*KGICTC
Trigger: ACAAGTACAGATACCTTTTCAAGCAAGTGGCAAGTT...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTATGTTACACTTGGCTTaGTGCTTGGCAGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVMLHLA*CLAVSA
Trigger: TGCTGAAACTGCCAAGCATCAAGCCAAGTGTAACAT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTTGTTCAATGCGTGAATaGGTATCATCGTGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLCSMRE*VSSCES
Trigger: GCTTTCACACGATGATACTCATTCACGCATTGAACA...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTCTCAGTCTATGTAACTaGGACTCCAGCTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLLSLCN*DSSCLL
Trigger: CAATAAACAGCTGGAGTCTCAGTTACATAGACTGAG...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCGGAGCAGCATAGGCTaGCTGCTATCTGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFRSSIG*LLSDLC
Trigger: GCAGAGGTCAGATAGCAGTCAGCCTATGCTGCTCCG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTGGCATTTCTTCCTCTTaGACTAGGGAAGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVGISSS*TREGVV
Trigger: AACAACTCCTTCCCTAGTTCAAGAGGAAGAAATGCC...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACCCGCAGTGCCTTGTTaGCATTGTTCAGGGCATGAA +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLPAVPC*HCSGHE
Trigger: TTCATGCCCTGAACAATGTCAACAAGGCACTGCGGG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTATTGCTGAGCTGGATCTaGGTTGGCTCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLLLSWI*VGSTAI
Trigger: AATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAA...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACGTTCTGACAACAGCTTaGCGCTGCCCAATGCCATCC +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDVLTTA*RCPMPS
Trigger: GGATGGCATTGGGCAGCGTCAAGCTGTTGTCAGAAC...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATACTAGAGTAACAGTCTaGCTGGCAGAGGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNTRVTV*LAEAPV
Trigger: TACTGGAGCCTCTGCCAGTCAGACTGTTACTCTAGT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAACACTTATCTGCCGTTaGCGGAGGTCTTTGGCCAAC +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLTLICR*RRSLAN
Trigger: GTTGGCCAAAGACCTCCGTCAACGGCAGATAAGTGT...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGCAGCTTGGCGCAACTTaGGGTCCAGTTCATCGGCAG +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVQLGAT*GPVHRQ
Trigger: CTGCCGATGAACTGGACCTCAAGTTGCGCCAAGCTG...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACCCAGTGTGGTCAGCTaGTGTGCAAGGTCATTGACA +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLPSVVS*CARSLT
Trigger: TGTCAATGACCTTGCACATCAGCTGACCACACTGGG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCTCTCCCAGGGACCCTaGACTGAAGTGGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLLSQGP*TEVERK
Trigger: CTTCCTTTCCACTTCAGTTCAGGGTCCCTGGGAGAG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCGGGCACTTTGTTTGGTaGGATGGCTCTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFGHFVW*DGSLPG
Trigger: CCCTGGGAGAGAGCCATCTCACCAAACAAAGTGCCC...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCAGGCGATCATATTCTaGTTGCAGATTCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCQAIIF*LQIPVF
Trigger: GAAAACAGGAATCTGCAAGCAGAATATGATCGCCTG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGGGAGACAGGCCTTTATaGTCATGCTGCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKGDRPL*SCCCFR
Trigger: CCTGAAGCAGCAGCATGAGCATAAAGGCCTGTCTCC...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGGAGACAGGCCTTTATaGTCATGCTGCTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLGDRPL*SCCCFR
Trigger: CCTGAAGCAGCAGCATGAGCATAAAGGCCTGTCTCC...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGATTCTGAAGTTTGACTaGCAACCACTCGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQILKFD*QPLGAA
Trigger: TGCTGCTCCGAGTGGTTGGCAGTCAAACTTCAGAAT...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCCTTGAATGGCTTCAATaGTCACTTGTTGTGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLEWLQ*SLVVAK
Trigger: TTTTGCCACAACAAGTGAGCATTGAAGCCATTCAAG...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTTTTCTGAACTTCTCTaGTTTTTCTCGTGCTATGGC +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTFSELL*FFSCYG
Trigger: GCCATAGCACGAGAAAAAGCAGAGAAGTTCAGAAAA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTTCCATTCAGCCTGGTaGACAGCCATTGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNFHSAW*TAIGSW
Trigger: CCAACTACCAATGGCTGTGCACCAGGCTGAATGGAA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGTTTGCCATCAATTTTaGTGCTTGGTCACGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFVCHQF*CLVTCG
Trigger: TCCACACGTGACCAAGCAGCAAAATTGATGGCAAAC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGATGGAGGTGGCACTTTaGAAGGCTGCTGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMMEVAL*KAAVFF
Trigger: GAAGAAGACAGCAGCCTTGCAAAGTGCCACCTCCAT...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTGTTCTTTTAGCTGCTaGTCATCTCCAAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCCSFSC*SSPSGV
Trigger: TACTCCACTTGGAGATGAGCAGCAGCTAAAAGAACA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCTCTGTTCCAAATCTTaGAGTGTTGCCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCLCSKS*SVAFCL
Trigger: CAAACAGAAGGCAACACTGCAAGATTTGGAACAGAG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTATTCTGCTTCTGAACTaGTGGGAAATCACCACCGAT +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVILLLN*WEITTD
Trigger: ATCGGTGGTGATTTCCCAGCAGTTCAGAAGCAGAAT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGAAGCAAAGGGCCTTCTaGAGCCTTCTGAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMKQRAF*SLLSFM
Trigger: CATGAAGCTCAGAAGGCTCCAGAAGGCCCTTTGCTT...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGAGCCACACCATAGACTaGGGTTCCAGGCGCATCCAG +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVSHTID*GSRRIQ
Trigger: CTGGATGCGCCTGGAACCCCAGTCTATGGTGTGGCT...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTGCAATACTCTACCATaGGGTAGTGCATTTTATGGC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCCNTLP*GSAFYG
Trigger: GCCATAAAATGCACTACCCCATGGTAGAGTATTGCA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGAGGCGTCCTTTGTGTTaGCGCAGTAGCTTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKRRPLC*RSSLAS
Trigger: TGAGGCTAAGCTACTGCGCCAACACAAAGGACGCCT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGTTGCTTTCTGACTGCTaGATCCACGTCCTGATGCTA +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQLLSDC*IHVLML
Trigger: TAGCATCAGGACGTGGATCCAGCAGTCAGAAAGCAA...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGTTCTGTCTCCAGTCTaGATGCAAACTCAAGTTCAG +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFVLSPV*MQTQVQ
Trigger: CTGAACTTGAGTTTGCATCCAGACTGGAGACAGAAC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTGCCCAATGCCATCCTaGAGTTCCTTAAGATACCAT +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFCPMPS*SSLRYH
Trigger: ATGGTATCTTAAGGAACTCCAGGATGGCATTGGGCA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGAGCTCCCGAAGTAAATaGTTTACAGCCTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQSSRSK*FTASHS
Trigger: TGAGTGGGAGGCTGTAAACCATTTACTTCGGGAGCT...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTATGAGTTCTTCCAATTaGGGGCGTCTCTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFMSSSN*GRLCSK
Trigger: TTTGGAACAGAGACGCCCCCAATTGGAAGAACTCAT...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGTTGACGGAGGTCTTTaGCCAACTGCTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNVDGGL*PTAWFL
Trigger: CAGAAACCAAGCAGTTGGCCAAAGACCTCCGTCAAC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCGTCCTGTAGGACATTaGCAGTTGTTTCTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNRPVGH*QLFLLP
Trigger: CGGAAGCAGAAACAACTGCCAATGTCCTACAGGACG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGCAGGAGGCAGTTCTCTaGGCTCCTGGTAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKQEAVL*APGRVS
Trigger: AGAAACTCTACCAGGAGCCCAGAGAACTGCCTCCTG...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACGGACCAAAGTCCCTGTaGGCTTCATGCAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDGPKSL*ASCSCL
Trigger: CAGACAGCTGCATGAAGCCCACAGGGACTTTGGTCC...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGCTTTGTTTGGTGAGATaGCTCTCTCCCAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKLCLVR*LSPRDP
Trigger: AGGGTCCCTGGGAGAGAGCCATCTCACCAAACAAAG...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR CAA 72 bp CATTCTTTTACAGAGTTGTTGCTCCCCTCATATAAATaGACTGAGGAGCCGCAACCTTTAGCTCCTACCATC +
Preference number: 4 (lower is better)
Translates to: HSFTELLLPSYK*TEEPQPLAPTI
Trigger: GATGGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAACTCTGTAAAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CAA 72 bp TTTAGACATTTCAGCCCGTCAACTAGACCAGAGAGTTaGGAGACGCTTTTGCTCTCAAAACTTTCCAACCAC +
Preference number: 4 (lower is better)
Translates to: FRHFSPSTRPES*ETLLLSKLSNH
Trigger: GTGGTTGGAAAGTTTTGAGAGCAAAAGCGTCTCCAAACTCTCTGGTCTAGTTGACGGGCTGAAATGTCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACGGCATCACATGCAGCTaGCAGGCTCAAGAGATCCAA +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDGITCS*QAQEIQ
Trigger: TTGGATCTCTTGAGCCTGTCAGCTGCATGTGATGCC...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAACTTGCCACTTGCTTaGAAAGGTATCTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCNLPLA*KGICTC
Trigger: ACAAGTACAGATACCTTTTCAAGCAAGTGGCAAGTT...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCTCAGTCTATGTAACTaGGACTCCAGCTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFLSLCN*DSSCLL
Trigger: CAATAAACAGCTGGAGTCTCAGTTACATAGACTGAG...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGGCTGACTGCTATCTaGCCTCTGCAGAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFRLTAI*PLQRGG
Trigger: TCCACCTCTCTGCAGAGGTCAGATAGCAGTCAGCCT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCTGTGTTAGGGATGGTTaGGTGGTGGTGACAGCCTGT +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLCVRDG*VVVTAC
Trigger: ACAGGCTGTCACCACCACTCAACCATCCCTAACACA...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTTTTTCTTGCAAGTCTaGGATGTTGCCTTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCFFLQV*DVAFFS
Trigger: CGAAAAGAAGGCAACATCTCAGACTTGCAAGAAAAA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTGCAACATCAATTTGTaGAAGAACCCTTTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVCNINL*KNPLVG
Trigger: GCCAACCAAAGGGTTCTTTCACAAATTGATGTTGCA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTTTTCCACTTCAGACTTaGCTTCACTCAGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLFPLQT*LHSGFY
Trigger: ATAAAAGCCTGAGTGAAGTCAAGTCTGAAGTGGAAA...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGTAACACTCTTCAAGTaGGCCTTCTGTTTCTCAATC +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFVTLFK*AFCFSI
Trigger: GATTGAGAAACAGAAGGCTCACTTGAAGAGTGTTAC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTCCTTGTACATTCTATaGAGTTTTTCCCCCTGGAAA +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCSLYIL*SFSPWK
Trigger: TTTCCAGGGGGAAAAACTTCATAGAATGTACAAGGA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCACCATCACTCTCTGTaGTTTTATAACTCGATCAAG +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCHHHSL*FYNSIK
Trigger: CTTGATCGAGTTATAAAATCACAGAGAGTGATGGTG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCAAACAAGAAGTTCCTaGAGAGAAAGATGCAAACGC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVQTRSS*RERCKR
Trigger: GCGTTTGCATCTTTCTCTTCAGGAACTTCTTGTTTG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCTTGCAGAGAGTCAATaGGGAGATCCCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFLAESQ*GDPPLA
Trigger: AGCCAGTGGGGGATCTCCTCATTGACTCTCTGCAAG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTAAACAGTTAATTATCTaGAGGATATCCATGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLKQLII*RISMGW
Trigger: CCAGCCCATGGATATCCTGCAGATAATTAACTGTTT...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCGTTGAACTTGCCACTTaGTTGAAAAGGTATCTGTAC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCVELAT*LKRYLY
Trigger: GTACAGATACCTTTTCAAGCAAGTGGCAAGTTCAAC...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCAGGCGATCATATTCTaGTTGCAGATTCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVQAIIF*LQIPVF
Trigger: GAAAACAGGAATCTGCAAGCAGAATATGATCGCCTG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTGGTCTTCCAGGATTTaGATCCTGGCTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDWSSRI*ILASRR
Trigger: ACGCCTGGAAGCCAGGATGCAAATCCTGGAAGACCA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTGGTCTTCCAGGATTTaGATCCTGGCTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWWSSRI*ILASRR
Trigger: ACGCCTGGAAGCCAGGATGCAAATCCTGGAAGACCA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCTGCTATCTGACCTCTaGAGAGAGGTGGAAGGAGAG +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLLSDL*REVEGE
Trigger: CTCTCCTTCCACCTCTCTGCAGAGGTCAGATAGCAG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGATTCTGAAGTTTGACTaGCAACCACTCGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMILKFD*QPLGAA
Trigger: TGCTGCTCCGAGTGGTTGGCAGTCAAACTTCAGAAT...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCTTCTTCTAACCCTGTaGTTGTGTCCTGGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLLLTL*LCPGED
Trigger: GTCCTCCCCAGGACACAAGCACAGGGTTAGAAGAAG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTATGACAATAACTCATaGCAACATGCCCAAACTTCT +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTYDNNS*QHAQTS
Trigger: AGAAGTTTGGGCATGTTGGCATGAGTTATTGTCATA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGGATTTCCTCAGGTCCTaGAGGAACATTTTCCATGGT +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQDFLRS*RNIFHG
Trigger: ACCATGGAAAATGTTCCTGCAGGACCTGAGGAAATC...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGGTGGTCACCGCGGTTTaGCATCAATTTTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKVVTAV*HQFCCL
Trigger: CAAGCAGCAAAATTGATGGCAAACCGCGGTGACCAC...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAAAATTGCTCTCAATTTaGCGCCAGCGCTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLKLLSI*RQRLLS
Trigger: GCTCAGCAAGCGCTGGCGGCAAATTGAGAGCAATTT...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAATGGAGGTGGCACTTTaGAAGGCTGCTGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLMEVAL*KAAVFF
Trigger: GAAGAAGACAGCAGCCTTGCAAAGTGCCACCTCCAT...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGTTGAAGTCTGCCAGTaGAGGTACCTCCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLVEVCQ*RYLQQQ
Trigger: TTGCTGTTGGAGGTACCTGCACTGGCAGACTTCAAC...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTATTGGCAGTTGTTTCTaGTTCCGTAATCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVIGSCF*FRNPGK
Trigger: CTTTCCTGGATTACGGAAGCAGAAACAACTGCCAAT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGTGTGGTCAGCTGATGTaGAAGGTCATTGACACGATT +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQCGQLM*KVIDTI
Trigger: AATCGTGTCAATGACCTTGCACATCAGCTGACCACA...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGGAAGTGGAAAGGAAGTaGTGGGATGCAGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKEVERK*WDAGPK
Trigger: CTTTGGTCCTGCATCCCAGCACTTCCTTTCCACTTC...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGAGGACTCCATCGCTCTaGCCAAATCATCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKRTPSL*PNHLPC
Trigger: ACATGGCAGATGATTTGGGCAGAGCGATGGAGTCCT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS-3UTR CCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGAGGATATCCATGGGCTaGTCATTTTGCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQRISMG*SFCLRL
Trigger: CAACCTCAAGCAAAATGACCAGCCCATGGATATCCT...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAAAGGAAATCAAGATCTaGGCAGGACTACGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLKEIKI*AGLRGW
Trigger: CCAGCCTCGTAGTCCTGCCCAGATCTTGATTTCCTT...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGAGGAGGAGATGGCAGTaGAGACAGGCCTTTATGCTC +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWRRRWQ*RQAFML
Trigger: GAGCATAAAGGCCTGTCTCCACTGCCATCTCCTCCT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCAGGAGGAGATGGCAGTaGAGACAGGCCTTTATGCTC +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLRRRWQ*RQAFML
Trigger: GAGCATAAAGGCCTGTCTCCACTGCCATCTCCTCCT...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAAGGCGTCCTTTGTGTTaGCGCAGTAGCTTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSRRPLC*RSSLAS
Trigger: TGAGGCTAAGCTACTGCGCCAACACAAAGGACGCCT...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGGTGGAAGTTCCTCTTaGGCATGTTTTACCATGATT +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFGGSSS*ACFTMI
Trigger: AATCATGGTAAAACATGCCCAAGAGGAACTTCCACC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCTTTTGAGGAGGTGGTaGTGGAAGTTCCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLLRRW*WKFLLG
Trigger: GCCCAAGAGGAACTTCCACCACCACCTCCTCAAAAG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGATTTCCTGGGCAGACTaGATACTCTGTTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQISWAD*ILCSSN
Trigger: GTTGCTTGAACAGAGTATCCAGTCTGCCCAGGAAAT...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCCTGTTCAACACTCTTaGTTTCCAATGCAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVPVQHS*FPMQAN
Trigger: ATTTGCCTGCATTGGAAACCAAGAGTGTTGAACAGG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGACTACTTTCCTGCAGTaGTCACCGCGGTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWTTFLQ*SPRFAI
Trigger: GATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACACTACTTTCCTGCAGTaGTCACCGCGGTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDTTFLQ*SPRFAI
Trigger: GATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGT...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCCTTTTCCATGGAGGTaGCACTTTGCAAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLPFPWR*HFARLL
Trigger: CAGCAGCCTTGCAAAGTGCCACCTCCATGGAAAAGG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACCTTTTCCATGGAGGTaGCACTTTGCAAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSPFPWR*HFARLL
Trigger: CAGCAGCCTTGCAAAGTGCCACCTCCATGGAAAAGG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTTTATCTTGCTCTTCTaGCCTTATGGGAGCACTTAC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVFILLF*PYGSTY
Trigger: GTAAGTGCTCCCATAAGGCCAGAAGAGCAAGATAAA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGAGACCTTTATCCACTaGAGATTTGTCTGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFETFIH*RFVCLS
Trigger: GCTCAAACAGACAAATCTCCAGTGGATAAAGGTCTC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCGGTCCTGCCTGACTTaGTTGGTTATAAATTTCCAA +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVRSCLT*LVINFQ
Trigger: TTGGAAATTTATAACCAACCAAGTCAGGCAGGACCG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACAGGAGGCAGTTCTCTaGGCTCCTGGTAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSQEAVL*APGRVS
Trigger: AGAAACTCTACCAGGAGCCCAGAGAACTGCCTCCTG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGACCAAAGTCCCTGTaGGCTTCATGCAGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVGPKSL*ASCSCL
Trigger: CAGACAGCTGCATGAAGCCCACAGGGACTTTGGTCC...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACTTTGTTTGGTGAGATaGCTCTCTCCCAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSLCLVR*LSPRDP
Trigger: AGGGTCCCTGGGAGAGAGCCATCTCACCAAACAAAG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR CAA 72 bp CTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTaGTTTAGACATTTCAGCCCGTCAACTAGACCAGAG +
Preference number: 4 (lower is better)
Translates to: LLHFFSWFNDLH*FRHFSPSTRPE
Trigger: CTCTGGTCTAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
3UTR CAA 72 bp GGAGTAAAGCTCTTCCTAGCAGTCCTTAGCTTTCTGTaGCACTTTTTCTCCTGGTTCAATGACTTGCATTTG +
Preference number: 4 (lower is better)
Translates to: GVKLFLAVLSFL*HFFSWFNDLHL
Trigger: CAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAAGGACTGCTAGGAAGAGCTTTACTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTATACGCGGAGAACCTaGCATTATTCAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMYTRRT*HYSGQL
Trigger: TAGCTGACCTGAATAATGTCAGGTTCTCCGCGTATA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGCATCACATGCAGCTaGCAGGCTCAAGAGATCCAA +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVGITCS*QAQEIQ
Trigger: TTGGATCTCTTGAGCCTGTCAGCTGCATGTGATGCC...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACACAGAGAGGGACATTaGCCAGATTGTTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLHREGH*PDCCAL
Trigger: AAGAGCACAACAATCTGGTCAATGTCCCTCTCTGTG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTAACTTGCCACTTGCTTaGAAAGGTATCTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFNLPLA*KGICTC
Trigger: ACAAGTACAGATACCTTTTCAAGCAAGTGGCAAGTT...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGATAGATTCTGAAGTTTaGCTGCCAACCACTCGGAGC +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKIDSEV*LPTTRS
Trigger: GCTCCGAGTGGTTGGCAGTCAAACTTCAGAATCTAT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGGCATTTCTTCCTCTTaGACTAGGGAAGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNGISSS*TREGVV
Trigger: AACAACTCCTTCCCTAGTTCAAGAGGAAGAAATGCC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGACATTGTTCAGGGCATaGACTCTTGTAGATCCCTTT +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQTLFRA*TLVDPF
Trigger: AAAGGGATCTACAAGAGTTCATGCCCTGAACAATGT...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAAACAGGTCGGGCCTGTaGCTATGGATAAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSNRSGL*LWIRAF
Trigger: GAATGCTCTTATCCATAGTCACAGGCCCGACCTGTT...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTTCTTCAACATCATTTaGAATCTCTCCTTGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFFFNII*NLSLCS
Trigger: CGAGCACAAGGAGAGATTTCAAATGATGTTGAAGAA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCATCTTGCAGTTTTCTaGACTTCTCTGCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVHLAVF*TSLLFL
Trigger: GAGAAAAAGCAGAGAAGTTCAGAAAACTGCAAGATG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACAGAGAGTTTGCTTTCTaGCTGCTGGATCCACGTCCT +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDREFAF*LLDPRP
Trigger: AGGACGTGGATCCAGCAGTCAGAAAGCAAACTCTCT...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTTTGAGTCTTCGAAACTaGGCAAAATTGCTCTCAATT +
Preference number: 4 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLLSLRN*AKLLSI
Trigger: AATTGAGAGCAATTTTGCTCAGTTTCGAAGACTCAA...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAACTAGAGTAACAGTCTaGCTGGCAGAGGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSTRVTV*LAEAPV
Trigger: TACTGGAGCCTCTGCCAGTCAGACTGTTACTCTAGT...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTACTGCTTGGTTTCTGTaGTCTTCTTTTGGATTGCAT +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVTAWFL*SSFGLH
Trigger: ATGCAATCCAAAAGAAGATCACAGAAACCAAGCAGT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCGTTTCATCAGCTCTCTaGCTCCCCTGGAGTCTTCTA +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLVSSAL*LPWSLL
Trigger: TAGAAGACTCCAGGGGAGTCAGAGAGCTGATGAAAC...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCGAAGTTCACTCCACTTaGAATTCATGTTATCCAAAC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCEVHST*NSCYPN
Trigger: GTTTGGATAACATGAATTTCAAGTGGAGTGAACTTC...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCGAGTGACATTCTaGGCTCTTTCTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFSRVTF*ALSSGG
Trigger: GCCTCCTGAAGAAAGAGCTCAGAATGTCACTCGGCT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCATCTCTGCCAATCAGCTaGGCGCAGGTTCAATTTGTC +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSSLPIS*AQVQFV
Trigger: GACAAATTGAACCTGCGCTCAGCTGATTGGCAGAGA...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCATCATCGGCAGCTTCCTaGAGTTCCTGGAGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSSSAAS*SSWSLS
Trigger: TGAAAGACTCCAGGAACTTCAGGAAGCTGCCGATGA...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTTGACTTTTTCAAGGTaGTCTTGCAGAGAGTCAATG +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVLTFSR*SCRESM
Trigger: CATTGACTCTCTGCAAGATCACCTTGAAAAAGTCAA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCCCAGTGTGGTCAGCTaGTGTGCAAGGTCATTGACA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFPSVVS*CARSLT
Trigger: TGTCAATGACCTTGCACATCAGCTGACCACACTGGG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTTGACCAGATTGTTGTaGTCTTGCTCCAGACGATCA +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNLTRLL*SCSRRS
Trigger: TGATCGTCTGGAGCAAGAGCACAACAATCTGGTCAA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGTTGAACTTGCCACTTaGTTGAAAAGGTATCTGTAC +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFVELAT*LKRYLY
Trigger: GTACAGATACCTTTTCAAGCAAGTGGCAAGTTCAAC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGCAGGCGATCATATTCTaGTTGCAGATTCCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQQAIIF*LQIPVF
Trigger: GAAAACAGGAATCTGCAAGCAGAATATGATCGCCTG...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAAGGCGTTTTCCATCCTaGAGGTCACTGAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSRRFPS*RSLKRL
Trigger: CAACCTCTTCAGTGACCTGCAGGATGGAAAACGCCT...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTGAAAGTTTCTTCCAGTaGCCCTCAATCTCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVESFFQ*PSISSN
Trigger: ATTTGAAGAGATTGAGGGGCACTGGAAGAAACTTTC...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCGCTCTACTACTTTCCTaGAGTGGTCACCGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFALLLS*SGHRGL
Trigger: CAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAGC...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCTCTACTACTTTCCTaGAGTGGTCACCGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVALLLS*SGHRGL
Trigger: CAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAGC...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGAGCTTGCCTGCGCACTaGATTCAGCTCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWSLPAH*IQLLFL
Trigger: AAGAAAGAGGAGCTGAATGCAGTGCGCAGGCAAGCT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTTTTCCTTATACAAATaGTGCCCTTTCGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCFSLYK*CPFDKS
Trigger: GCTTTTGTCGAAAGGGCAGCATTTGTATAAGGAAAA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCTCGGTTGAAGTCTaGCAGTGCAGGTACCTCCAA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFSSVEV*QCRYLQ
Trigger: TTGGAGGTACCTGCACTGGCAGACTTCAACCGAGCT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATAGGTCTTTGGCCAACTaGTTGGTTTCTGTGATCTTC +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNRSLAN*LVSVIF
Trigger: GAAGATCACAGAAACCAAGCAGTTGGCCAAAGACCT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTCTCCTTGGAGATCTTaGCATGGTTTCATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMSPWRS*HGFISS
Trigger: AGAGCTGATGAAACCATGGCAAGATCTCCAAGGAGA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCCACTGGTCAGAACTTaGTTCCAAATGGGACCTAAT +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNPLVRT*FQMGPN
Trigger: ATTAGGTCCCATTTGGAAGCAAGTTCTGACCAGTGG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCAAGGTGAGAGCTGAATaGCCAGTGTGGTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLKVRAE*PVWSAD
Trigger: ATCAGCTGACCACACTGGGCATTCAGCTCTCACCTT...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGAAGTGGAAAGGAAGTaGTGGGATGCAGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSEVERK*WDAGPK
Trigger: CTTTGGTCCTGCATCCCAGCACTTCCTTTCCACTTC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGAGGATATCCATGGGCTaGTCATTTTGCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMRISMG*SFCLRL
Trigger: CAACCTCAAGCAAAATGACCAGCCCATGGATATCCT...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTCTCAGGTTTATTATTaGCAAATTGGAAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVSQVYY*QIGSSS
Trigger: GGAGCTGCTTCCAATTTGCCAATAATAAACCTGAGA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCACTTGGCTTGATGCTTaGCAGTTTCAGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLTWLDA*QFQQQP
Trigger: TGGCTGCTGCTGAAACTGCCAAGCATCAAGCCAAGT...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCCTGAATCCAATGATTaGACACTCCTTACAGATGTT +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFPESND*TLLTDV
Trigger: AACATCTGTAAGGAGTGTCCAATCATTGGATTCAGG...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGAAGGAAATCAAGATCTaGGCAGGACTACGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWKEIKI*AGLRGW
Trigger: CCAGCCTCGTAGTCCTGCCCAGATCTTGATTTCCTT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGGAGGAGATGGCAGTaGAGACAGGCCTTTATGCTC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFRRRWQ*RQAFML
Trigger: GAGCATAAAGGCCTGTCTCCACTGCCATCTCCTCCT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGCATGTTCCAGTCTTTaGGTGGCTGAGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWACSSL*VAECCE
Trigger: TTCACAGCACTCAGCCACCCAAAGACTGGAACATGC...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGTTGAGGAGGTGGTGGTaGAAGTTCCTCTTGGGCATG +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVLRRWW*KFLLGM
Trigger: CATGCCCAAGAGGAACTTCCACCACCACCTCCTCAA...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATATTTCCTGGGCAGACTaGATACTCTGTTCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNISWAD*ILCSSN
Trigger: GTTGCTTGAACAGAGTATCCAGTCTGCCCAGGAAAT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTTGGCATCCTTCCCCTaGTTATGTTTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVLASFP*LCFFIS
Trigger: AGAAATGAAGAAACATAACCAGGGGAAGGATGCCAA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTTGGCATCCTTCCCCTaGTTATGTTTCTTCATTTCT +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFLASFP*LCFFIS
Trigger: AGAAATGAAGAAACATAACCAGGGGAAGGATGCCAA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCATGTGAAAGAACCCTTTaGTTGGCATCCTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSCERTL*LASFPW
Trigger: CCAGGGGAAGGATGCCAACCAAAGGGTTCTTTCACA...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCAATTTCAGCCTCCAGTaGTTCAAGCAATTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTNFSLQ*FKQFLY
Trigger: ATACAAAAATTGCTTGAACCACTGGAGGCTGAAATT...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCTGCTCATCTCCAAGTaGAGTAATAGCAATGTTATC +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFLLISK*SNSNVI
Trigger: GATAACATTGCTATTACTCCACTTGGAGATGAGCAG...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACGTTGACGGAGGTCTTTaGCCAACTGCTTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDVDGGL*PTAWFL
Trigger: CAGAAACCAAGCAGTTGGCCAAAGACCTCCGTCAAC...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCTTGATCACCTCAGCTTaGCGCAACTTGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLLITSA*RNLRSS
Trigger: ACTGGACCTCAAGTTGCGCCAAGCTGAGGTGATCAA...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGACCCTGAACTGAAGTaGAAAGGAAGTGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSDPELK*KGSAGM
Trigger: CATCCCAGCACTTCCTTTCCACTTCAGTTCAGGGTC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCACAGAGAGGGACATTaGCCAGATTGTTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLHREGH*PDCCAL
Trigger: AAGAGCACAACAATCTGGTCAATGTCCCTCTCTGTG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTAACTGTCTTGGGATTTaGATAGAATCATGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVNCLGI*IESCRR
Trigger: TCTTCTGCATGATTCTATTCAAATCCCAAGACAGTT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCATCCACCTTGTCAGTaGTATAAGCTGCCAACTGCT +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWHPPCQ*YKLPTA
Trigger: AGCAGTTGGCAGCTTATATCACTGACAAGGTGGATG...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACATCCACCTTGTCAGTaGTATAAGCTGCCAACTGCT +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSHPPCQ*YKLPTA
Trigger: AGCAGTTGGCAGCTTATATCACTGACAAGGTGGATG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTGCAACATCAATTTGTaGAAGAACCCTTTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMCNINL*KNPLVG
Trigger: GCCAACCAAAGGGTTCTTTCACAAATTGATGTTGCA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCAGGCAAATGCATCTTaGCTTCATCTAAAATCATCT +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVQANAS*LHLKSS
Trigger: AGATGATTTTAGATGAAGTCAAGATGCATTTGCCTG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTATTCTCAATCTCTTTTTaGGTAGCCTTTCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLFSISF*VAFPQA
Trigger: TGCCTGGGGAAAGGCTACTCAAAAAGAGATTGAGAA...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGTTGCATTCAGTGTTCTaGCAACAGCTTGACGCTGCC +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVLHSVF*QQLDAA
Trigger: GGCAGCGTCAAGCTGTTGTCAGAACACTGAATGCAA...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTCCGCTTGTTTACCGTaGACTGTTACTTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKSACLP*TVTSIS
Trigger: GGAGATTGAAGTAACAGTTCACGGTAAACAAGCGGA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGTTGACTTTTTCAAGGTaGTCTTGCAGAGAGTCAATG +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQLTFSR*SCRESM
Trigger: CATTGACTCTCTGCAAGATCACCTTGAAAAAGTCAA...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCATTTTGCTTGAGGTTGTaGTGGTCCAGGGCATCACAT +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSFCLRL*WSRASH
Trigger: ATGTGATGCCCTGGACCAGCACAACCTCAAGCAAAA...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCTTTGGGTGGCTGAGTaGTGTGAAACCACACTATTC +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWLWVAE*CETTLF
Trigger: GAATAGTGTGGTTTCACAGCACTCAGCCACCCAAAG...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACGAGTTGACCCTGACCTaGTCCTGTTCTAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDELTLT*SCSRSS
Trigger: AGAAGATCTAGAACAGGAGCAGGTCAGGGTCAACTC...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAAAAGGCCACAAAGTCTaGATCCAGAAACATTGGCCC +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSKGHKV*IQKHWP
Trigger: GGGCCAATGTTTCTGGATGCAGACTTTGTGGCCTTT...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTCCAATGCAGGCAAATaGATCTTGACTTCATCTAAA +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVSNAGK*ILTSSK
Trigger: TTTAGATGAAGTCAAGATGCATTTGCCTGCATTGGA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAAATTGCTCTCAATTTaGCGCCAGCGCTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFKLLSI*RQRLLS
Trigger: GCTCAGCAAGCGCTGGCGGCAAATTGAGAGCAATTT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGAAACTGAGCAAAATTaGTCTCAATTTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLETEQN*SQFAAS
Trigger: GCTGGCGGCAAATTGAGAGCAATTTTGCTCAGTTTC...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGGCACTTTGCAAGGCTaGTGTCTTCTTCTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLGTLQG*CLLLVN
Trigger: ATTCACAAGAAGAAGACAGCAGCCTTGCAAAGTGCC...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGAGTTGTTCTTTTAGCTaGTGCTCATCTCCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMSCSFS*CSSPSG
Trigger: TCCACTTGGAGATGAGCAGCAGCTAAAAGAACAACT...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGCCACTGGTCAGAACTTaGTTCCAAATGGGACCTAAT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKPLVRT*FQMGPN
Trigger: ATTAGGTCCCATTTGGAAGCAAGTTCTGACCAGTGG...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATAGTCCTTCCAAAGGCTaGTCTGTCAGAAATATTCTC +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNSPSKG*SVRNIL
Trigger: GAGAATATTTCTGACAGAGCAGCCTTTGGAAGGACT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGAGGATATCCATGGGCTaGTCATTTTGCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKRISMG*SFCLRL
Trigger: CAACCTCAAGCAAAATGACCAGCCCATGGATATCCT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTTCACCCAACTGTCTTaGGATTTGAATAGAATCATG +
Preference number: 4 (lower is better)
Translates to: PVPHKGERERESKTRTKFFTQLS*DLNRIM
Trigger: CATGATTCTATTCAAATCCCAAGACAGTTGGGTGAA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGACTTGGCTTGATGCTTaGCAGTTTCAGCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVTWLDA*QFQQQP
Trigger: TGGCTGCTGCTGAAACTGCCAAGCATCAAGCCAAGT...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCGTTCCAGTCTTTGGGTaGCTGAGTGCTGTGAAACCA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFVPVFG*LSAVKP
Trigger: TGGTTTCACAGCACTCAGCCACCCAAAGACTGGAAC...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCAAGTGACTTGTCTCTaGGAGCTTCCAAATGCTGTG +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLQVTCL*ELPNAV
Trigger: CACAGCATTTGGAAGCTCCCAGAGACAAGTCACTTG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGATAGGGTGGTAGACTaGGTTTTCAACAAGTTTTCG +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNDRVVD*VFNKFS
Trigger: CGAAAACTTGTTGAAAACCCAGTCTACCACCCTATC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACTGAAGGTGCTTTCTTaGCCATCTCCTTCACAGTGT +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSLKVLS*PSPSQC
Trigger: ACACTGTGAAGGAGATGGCCAAGAAAGCACCTTCAG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAATTTCAGCCTCCAGTaGTTCAAGCAATTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCNFSLQ*FKQFLY
Trigger: ATACAAAAATTGCTTGAACCACTGGAGGCTGAAATT...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCTTTCACCTTTTCCATaGAGGTGGCACTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLSPFP*RWHFAR
Trigger: CCTTGCAAAGTGCCACCTCCATGGAAAAGGTGAAAG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACTTTCACCTTTTCCATaGAGGTGGCACTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSLSPFP*RWHFAR
Trigger: CCTTGCAAAGTGCCACCTCCATGGAAAAGGTGAAAG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTGCCCAATGCCATCCTaGAGTTCCTTAAGATACCAT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKCPMPS*SSLRYH
Trigger: ATGGTATCTTAAGGAACTCCAGGATGGCATTGGGCA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGCTCTTCTGGCCTTATaGGAGCACTTACAAGTACTG +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSALLAL*EHLQVL
Trigger: CAGTACTTGTAAGTGCTCCCATAAGGCCAGAAGAGC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGCACTGGCTGAGTGCTTaGTTTTTCCTTATACAAATG +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQHWLSA*FFLIQM
Trigger: CATTTGTATAAGGAAAAACCAAGCACTCAGCCAGTG...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGTAGAAGCCTCCATCTaGTATTCAGATCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNVEASI*YSDLPK
Trigger: CTTTGGAAGATCTGAATACCAGATGGAGGCTTCTAC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGGTAGAAGCCTCCATCTaGTATTCAGATCTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMVEASI*YSDLPK
Trigger: CTTTGGAAGATCTGAATACCAGATGGAGGCTTCTAC...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGAACTTGCCACTTGCTTaGAAAGGTATCTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMNLPLA*KGICTC
Trigger: ACAAGTACAGATACCTTTTCAAGCAAGTGGCAAGTT...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATGTTACACTTGGCTTaGTGCTTGGCAGTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDMLHLA*CLAVSA
Trigger: TGCTGAAACTGCCAAGCATCAAGCCAAGTGTAACAT...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTGTTCAATGCGTGAATaGGTATCATCGTGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKCSMRE*VSSCES
Trigger: GCTTTCACACGATGATACTCATTCACGCATTGAACA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGATAGATTCTGAAGTTTaGCTGCCAACCACTCGGAGC +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVIDSEV*LPTTRS
Trigger: GCTCCGAGTGGTTGGCAGTCAAACTTCAGAATCTAT...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGCTCACCCATAGATTCTaGAGTTTGACTGCCAACCAC +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVLTHRF*SLTANH
Trigger: GTGGTTGGCAGTCAAACTTCAGAATCTATGGGTGAG...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCTCACCCATAGATTCTaGAGTTTGACTGCCAACCAC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFLTHRF*SLTANH
Trigger: GTGGTTGGCAGTCAAACTTCAGAATCTATGGGTGAG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCCAAGAGTGAGTTTATaGTTTCCATCCACTATGTCA +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNPRVSL*FPSTMS
Trigger: TGACATAGTGGATGGAAATCATAAACTCACTCTTGG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTGTTGTGGCAAAACTTaGAAGAGTGATGTGATGTAC +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNCCGKT*KSDVMY
Trigger: GTACATCACATCACTCTTTCAAGTTTTGCCACAACA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGGAGCTGACAATCTGTTaGCTTCATCCTTACAAATTT +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQELTIC*LHPYKF
Trigger: AAATTTGTAAGGATGAAGTCAACAGATTGTCAGCTC...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACCAACTGCTTGTCAATaGATTCAAGCGACTCCTGAA +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSPTACQ*IQATPE
Trigger: TTCAGGAGTCGCTTGAATTCATTGACAAGCAGTTGG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGCAGGCAAATGCATCTTaGCTTCATCTAAAATCATCT +
Preference number: 4 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQQANAS*LHLKSS
Trigger: AGATGATTTTAGATGAAGTCAAGATGCATTTGCCTG...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGGAGACCTCAAATCCTTaGGAGCATTATGTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMETSNP*EHYVLS
Trigger: AGACAAAACATAATGCTCTCAAGGATTTGAGGTCTC...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGCTGTCTTCTTCTTGTaGATAATATCAATCCGACCT +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNAVFFL*IISIRP
Trigger: AGGTCGGATTGATATTATTCACAAGAAGAAGACAGC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCTTCCTCTTCACTGGCTaGGTGCTTGGTTTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLFLFTG*VLGFSL
Trigger: TAAGGAAAAACCAAGCACTCAGCCAGTGAAGAGGAA...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTTCCTCTTCACTGGCTaGGTGCTTGGTTTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWFLFTG*VLGFSL
Trigger: TAAGGAAAAACCAAGCACTCAGCCAGTGAAGAGGAA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGATTGCATCTACTGTGTaGGGACCTTCTTTCCATGAG +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWIASTV*GPSFHE
Trigger: CTCATGGAAAGAAGGTCCTCACACAGTAGATGCAAT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGATATCATTCTGCTTCTaGACTGCTGGGAAATCACCA +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKISFCF*TAGKSP
Trigger: TGGTGATTTCCCAGCAGTTCAGAAGCAGAATGATAT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTATACATTGTGTCCTCTTaGACTAGGGAAGGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLYIVSS*TREGVV
Trigger: AACAACTCCTTCCCTAGTTCAAGAGGACACAATGTA...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGCTTCTTCATCTGTCATaGCTGAAACTAAGGACTCCA +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKLLHLS*LKLRTP
Trigger: TGGAGTCCTTAGTTTCAGTCATGACAGATGAAGAAG...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTTTTGCTTGAGGTTGTaGTGGTCCAGGGCATCACAT +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFFCLRL*WSRASH
Trigger: ATGTGATGCCCTGGACCAGCACAACCTCAAGCAAAA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTTGACCAGATTGTTGTaGTCTTGCTCCAGACGATCA +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWLTRLL*SCSRRS
Trigger: TGATCGTCTGGAGCAAGAGCACAACAATCTGGTCAA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTCGGCTCAATGTTACTaGCCCCAAAGGAAGCAACTT +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFSAQCY*PQRKQL
Trigger: AAGTTGCTTCCTTTGGGGGCAGTAACATTGAGCCGA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCATTCTGAAGTTTGACTaGCAACCACTCGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFILKFD*QPLGAA
Trigger: TGCTGCTCCGAGTGGTTGGCAGTCAAACTTCAGAAT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTCACTGTTGGTTTGCTaGAATCCAGCCATGATAGTT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKSLLVC*NPAMIV
Trigger: AACTATCATGGCTGGATTGCAGCAAACCAACAGTGA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCATTAACACCCTCATTTaGCATCTGTTCCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFINTLI*HLFHQG
Trigger: GCCCTGGTGGAACAGATGGCAAATGAGGGTGTTAAT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGCTGAGGCATTTGAGCTaGATCCACCTTGTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVLRHLS*IHLVSD
Trigger: ATCACTGACAAGGTGGATGCAGCTCAAATGCCTCAG...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGTTTGCCATCAATTTTaGTGCTTGGTCACGTGTGGA +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSVCHQF*CLVTCG
Trigger: TCCACACGTGACCAAGCAGCAAAATTGATGGCAAAC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTATATCTGAGTTAAACTaGTCCAATTCCTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: ILCGVTCRETNAKETNAVISELN*SNSFKG
Trigger: TCCTTTGAAGGAATTGGAGCAGTTTAACTCAGATAT...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTCTCCTTGGAGATCTTaGCATGGTTTCATCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWSPWRS*HGFISS
Trigger: AGAGCTGATGAAACCATGGCAAGATCTCCAAGGAGA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGAGTCCTTCCAAAGGCTaGTCTGTCAGAAATATTCTC +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKSPSKG*SVRNIL
Trigger: GAGAATATTTCTGACAGAGCAGCCTTTGGAAGGACT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGTCTGCCCAAATCATCTaGCATGTGGAAAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVSAQII*HVEKAS
Trigger: GGAAGCCTTTTCCACATGGCAGATGATTTGGGCAGA...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTTATTATTGGCAAATTaGAAGCAGCTCCTGACACTC +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMLLLAN*KQLLTL
Trigger: GAGTGTCAGGAGCTGCTTCCAATTTGCCAATAATAA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTCTCAGGTTTATTATTaGCAAATTGGAAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMSQVYY*QIGSSS
Trigger: GGAGCTGCTTCCAATTTGCCAATAATAAACCTGAGA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTGCATCCAGAAACATTaGCCCCTGTCCCTTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWCIQKH*PLSLFF
Trigger: AAAGAAAAGGGACAGGGGCCAATGTTTCTGGATGCA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGTAGCTCTTTCTCTTTaGCCCTCACACCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSVALSL*PSHHQR
Trigger: TCTTTGATGGTGTGAGGGCCAAAGAGAAAGAGCTAC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCTGTTCTTCTAGCTTTTaGCAGCTTTCCACCAACTGG +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLCSSSF*QLSTNW
Trigger: CCAGTTGGTGGAAAGCTGCCAAAAGCTAGAAGAACA...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAAAAGAACCCTTTGGTTaGCATCCTTCCCCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSKEPFG*HPSPGY
Trigger: ATAACCAGGGGAAGGATGCCAACCAAAGGGTTCTTT...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTTGAGCTCAGAGATTTaGGGCTCTACTACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLSSEI*GSTTFL
Trigger: CAGGAAAGTAGTAGAGCCCCAAATCTCTGAGCTCAA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCGCTCTTCTGGCCTTATaGGAGCACTTACAAGTACTG +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFALLAL*EHLQVL
Trigger: CAGTACTTGTAAGTGCTCCCATAAGGCCAGAAGAGC...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGAGACCTTTATCCACTaGAGATTTGTCTGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLETFIH*RFVCLS
Trigger: GCTCAAACAGACAAATCTCCAGTGGATAAAGGTCTC...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTCTCAGGTAAAGCTCTaGAGACCTTTATCCACTGGA +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWSQVKL*RPLSTG
Trigger: TCCAGTGGATAAAGGTCTCCAGAGCTTTACCTGAGA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGAGCTCCCGAAGTAAATaGTTTACAGCCTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVSSRSK*FTASHS
Trigger: TGAGTGGGAGGCTGTAAACCATTTACTTCGGGAGCT...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATGAGTTCTTCCAATTaGGGGCGTCTCTGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDMSSSN*GRLCSK
Trigger: TTTGGAACAGAGACGCCCCCAATTGGAAGAACTCAT...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTTGGAGATCTTGCCATaGTTTCATCAGCTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLEILP*FHQLSD
Trigger: GTCAGAGAGCTGATGAAACCATGGCAAGATCTCCAA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR CAA 72 bp AGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTaGCATTTGTTTAGACATTTCAGCCCGTCAACTAGA +
Preference number: 4 (lower is better)
Translates to: SFLLHFFSWFND*HLFRHFSPSTR
Trigger: TCTAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTATACGCGGAGAACCTaGCATTATTCAGGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFYTRRT*HYSGQL
Trigger: TAGCTGACCTGAATAATGTCAGGTTCTCCGCGTATA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCATGTTCAATGCGTGAATaGGTATCATCGTGTGAAAGC +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSCSMRE*VSSCES
Trigger: GCTTTCACACGATGATACTCATTCACGCATTGAACA...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCTCAGTCTATGTAACTaGGACTCCAGCTGTTTATTG +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLSLCN*DSSCLL
Trigger: CAATAAACAGCTGGAGTCTCAGTTACATAGACTGAG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGCTTGAAAGAGTGATGTaGTGTACATTAAGATGGACT +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMLERVM*CTLRWT
Trigger: AGTCCATCTTAATGTACATCACATCACTCTTTCAAG...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGAACATTTCCACTTCTTaGATGGCTTCAATGCTCACT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKNISTS*MASMLT
Trigger: AGTGAGCATTGAAGCCATTCAAGAAGTGGAAATGTT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTTTCTGGCATATTTCTaGAGGTGCTTTCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWFLAYF*RCFLGH
Trigger: ATGGCCAAGAAAGCACCTTCAGAAATATGCCAGAAA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCGCCAATAGACGAATCTaGTTTGGGTTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFANRRI*FGFSSE
Trigger: TTCAGAGGAGAACCCAAATCAGATTCGTCTATTGGC...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACATTCCTTCAACTGCTaGTCTCTTCGTCAATTCTGT +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSHSFNC*SLRQFC
Trigger: ACAGAATTGACGAAGAGATCAGCAGTTGAAGGAATG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTTCTCAATCTCTTTTTaGGTAGCCTTTCCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFFSISF*VAFPQA
Trigger: TGCCTGGGGAAAGGCTACTCAAAAAGAGATTGAGAA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGGAGACCTCAAATCCTTaGGAGCATTATGTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKETSNP*EHYVLS
Trigger: AGACAAAACATAATGCTCTCAAGGATTTGAGGTCTC...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTCTTCATGGAGAGTGTaGATTTGTGCAAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKSSWRV*ICAKLS
Trigger: ACTCAACTTTGCACAAATTCACACTCTCCATGAAGA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTATCTTCATGGAGAGTGTaGATTTGTGCAAAGTTGAGT +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLSSWRV*ICAKLS
Trigger: ACTCAACTTTGCACAAATTCACACTCTCCATGAAGA...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGGCTGTCTTCTTCTTGTaGATAATATCAATCCGACCT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKAVFFL*IISIRP
Trigger: AGGTCGGATTGATATTATTCACAAGAAGAAGACAGC...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGCTAAAATCTTTTAAGTaGACCTCAAGCTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMLKSFK*TSSSPC
Trigger: ACAAGGAGAGCTTGAGGTTCACTTAAAAGATTTTAG...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTCCGCTTGTTTACCGTaGACTGTTACTTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFSACLP*TVTSIS
Trigger: GGAGATTGAAGTAACAGTTCACGGTAAACAAGCGGA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGATTGCATCTACTGTGTaGGGACCTTCTTTCCATGAG +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVIASTV*GPSFHE
Trigger: CTCATGGAAAGAAGGTCCTCACACAGTAGATGCAAT...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGACTGCTTGGTTTCTGTaGTCTTCTTTTGGATTGCAT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKTAWFL*SSFGLH
Trigger: ATGCAATCCAAAAGAAGATCACAGAAACCAAGCAGT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACAAACAAGAAGTTCCTaGAGAGAAAGATGCAAACGC +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSQTRSS*RERCKR
Trigger: GCGTTTGCATCTTTCTCTTCAGGAACTTCTTGTTTG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAATATCATTCTGCTTCTaGACTGCTGGGAAATCACCA +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSISFCF*TAGKSP
Trigger: TGGTGATTTCCCAGCAGTTCAGAAGCAGAATGATAT...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTTGACCAGATTGTTGTaGTCTTGCTCCAGACGATCA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFLTRLL*SCSRRS
Trigger: TGATCGTCTGGAGCAAGAGCACAACAATCTGGTCAA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACGATCTGCTGGCATCTTaGAGTTTTCTGAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDDLLAS*SFLNFS
Trigger: AGAGAAGTTCAGAAAACTGCAAGATGCCAGCAGATC...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAAGGTACAGAGAGTTTaGTTTCTGACTGCTGGATCC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFKVQRV*FLTAGS
Trigger: GGATCCAGCAGTCAGAAAGCAAACTCTCTGTACCTT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGCACTTTGCAAGGCTaGTGTCTTCTTCTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVGTLQG*CLLLVN
Trigger: ATTCACAAGAAGAAGACAGCAGCCTTGCAAAGTGCC...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCATGTTCTTTTAGCTGCTaGTCATCTCCAAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSCSFSC*SSPSGV
Trigger: TACTCCACTTGGAGATGAGCAGCAGCTAAAAGAACA...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCTCTGTTCCAAATCTTaGAGTGTTGCCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLCSKS*SVAFCL
Trigger: CAAACAGAAGGCAACACTGCAAGATTTGGAACAGAG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGATCTTCTTTTGGATTaGATCTACTGTGTGAGGACC +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSDLLLD*IYCVRT
Trigger: GGTCCTCACACAGTAGATGCAATCCAAAAGAAGATC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCCGAAGAAGTTTCAGTaGCAAATCATTTGCCACGTC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFPKKFQ*QIICHV
Trigger: GACGTGGCAAATGATTTGGCACTGAAACTTCTTCGG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAATTGGCAGTTGTTTCTaGTTCCGTAATCCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSIGSCF*FRNPGK
Trigger: CTTTCCTGGATTACGGAAGCAGAAACAACTGCCAAT...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCATTCTGCTTCTGAACTaGTGGGAAATCACCACCGAT +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFILLLN*WEITTD
Trigger: ATCGGTGGTGATTTCCCAGCAGTTCAGAAGCAGAAT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGTGTGGTCAGCTGATGTaGAAGGTCATTGACACGATT +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVCGQLM*KVIDTI
Trigger: AATCGTGTCAATGACCTTGCACATCAGCTGACCACA...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGAGGATATCCATGGGCTaGTCATTTTGCTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVRISMG*SFCLRL
Trigger: CAACCTCAAGCAAAATGACCAGCCCATGGATATCCT...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTTCACCCAACTGTCTTaGGATTTGAATAGAATCATG +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMFTQLS*DLNRIM
Trigger: CATGATTCTATTCAAATCCCAAGACAGTTGGGTGAA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTTATTATTGGCAAATTaGAAGCAGCTCCTGACACTC +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKLLLAN*KQLLTL
Trigger: GAGTGTCAGGAGCTGCTTCCAATTTGCCAATAATAA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTCTCAGGTTTATTATTaGCAAATTGGAAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKSQVYY*QIGSSS
Trigger: GGAGCTGCTTCCAATTTGCCAATAATAAACCTGAGA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACCTGAATCCAATGATTaGACACTCCTTACAGATGTT +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLPESND*TLLTDV
Trigger: AACATCTGTAAGGAGTGTCCAATCATTGGATTCAGG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTGCAATACTCTACCATaGGGTAGTGCATTTTATGGC +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDCNTLP*GSAFYG
Trigger: GCCATAAAATGCACTACCCCATGGTAGAGTATTGCA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACGAATCTTTTCACTGTTaGTTTGCTGCAATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDESFHC*FAAIQP
Trigger: TGGCTGGATTGCAGCAAACCAACAGTGAAAAGATTC...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTTGCATGATCACCGCTaGATTCATCAACCACTACTA +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWLHDHR*IHQPLL
Trigger: TAGTAGTGGTTGATGAATCCAGCGGTGATCATGCAA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTCTGATAGATCTTTTTaGAGGCTTACGGTTTTATCC +
Preference number: 4 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMSDRSF*RLTVLS
Trigger: GGATAAAACCGTAAGCCTCCAAAAAGATCTATCAGA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAACAGCCATTGGTAGTTaGTGGTCAGAGTTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSTAIGS*WSEFQV
Trigger: AACTTGAAACTCTGACCACCAACTACCAATGGCTGT...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGATTTTCCATTCAGCCTaGTGCACAGCCATTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVIFHSA*CTAIGS
Trigger: ACTACCAATGGCTGTGCACCAGGCTGAATGGAAAAT...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGACTTTTCAATTTCCTaGGCAGACTGGATACTCTGT +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWDFSIS*ADWILC
Trigger: ACAGAGTATCCAGTCTGCCCAGGAAATTGAAAAGTC...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCCTGTTCAACACTCTTaGTTTCCAATGCAGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDPVQHS*FPMQAN
Trigger: ATTTGCCTGCATTGGAAACCAAGAGTGTTGAACAGG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGCTGCTCATCTCCAAGTaGAGTAATAGCAATGTTATC +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKLLISK*SNSNVI
Trigger: GATAACATTGCTATTACTCCACTTGGAGATGAGCAG...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTTTATCTTGCTCTTCTaGCCTTATGGGAGCACTTAC +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWFILLF*PYGSTY
Trigger: GTAAGTGCTCCCATAAGGCCAGAAGAGCAAGATAAA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCGGTCCTGCCTGACTTaGTTGGTTATAAATTTCCAA +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLRSCLT*LVINFQ
Trigger: TTGGAAATTTATAACCAACCAAGTCAGGCAGGACCG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAAACTGTCTTGGGATTTaGATAGAATCATGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLNCLGI*IESCRR
Trigger: TCTTCTGCATGATTCTATTCAAATCCCAAGACAGTT...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTTTTCATCACATTTTTaGCCTGCCAGTGGAGGATTA +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDFSSHF*PASGGL
Trigger: TAATCCTCCACTGGCAGGTCAAAAATGTGATGAAAA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR TCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGCATTCCTTCAACTGCTaGTCTCTTCGTCAATTCTGT +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVHSFNC*SLRQFC
Trigger: ACAGAATTGACGAAGAGATCAGCAGTTGAAGGAATG...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTTGAGTCTTCGAAACTaGGCAAAATTGCTCTCAATT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKLSLRN*AKLLSI
Trigger: AATTGAGAGCAATTTTGCTCAGTTTCGAAGACTCAA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTTGAGAGACTTTTTCTaGAGTTCACTCCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKLRDFF*SSLHLK
Trigger: TTTCAAGTGGAGTGAACTTCAGAAAAAGTCTCTCAA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGTTGAACTTGCCACTTaGTTGAAAAGGTATCTGTAC +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWVELAT*LKRYLY
Trigger: GTACAGATACCTTTTCAAGCAAGTGGCAAGTTCAAC...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCTCTTTCAAAGAACTTTaGAGAGCCTGTAATTTCCCG +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLSFKEL*RACNFP
Trigger: CGGGAAATTACAGGCTCTGCAAAGTTCTTTGAAAGA...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTATCCAATGCAGGCAAATaGATCTTGACTTCATCTAAA +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLSNAGK*ILTSSK
Trigger: TTTAGATGAAGTCAAGATGCATTTGCCTGCATTGGA...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGAATAGCAATGTTATCTaGTTCTTCCAGCCACAAAAC +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKNSNVI*FFQPQN
Trigger: GTTTTGTGGCTGGAAGAAGCAGATAACATTGCTATT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGAGTTGTTCTTTTAGCTaGTGCTCATCTCCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVSCSFS*CSSPSG
Trigger: TCCACTTGGAGATGAGCAGCAGCTAAAAGAACAACT...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTTTTGTAAGACAGATTaGGTAGCTTTCGAGCACTCA +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDFCKTD*VAFEHS
Trigger: TGAGTGCTCGAAAGCTACGCAATCTGTCTTACAAAA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTTCACCCAACTGTCTTaGGATTTGAATAGAATCATG +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKFTQLS*DLNRIM
Trigger: CATGATTCTATTCAAATCCCAAGACAGTTGGGTGAA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTCTCAGGTTTATTATTaGCAAATTGGAAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWSQVYY*QIGSSS
Trigger: GGAGCTGCTTCCAATTTGCCAATAATAAACCTGAGA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTTTTCTATGCCTAACTaGCATTTTGCAATGTTGAAG +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNFSMPN*HFAMLK
Trigger: CTTCAACATTGCAAAATGCCAGTTAGGCATAGAAAA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCTTTTGAAGATGTCCTaGGCAACATTTCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLLLKMS*ATFPLL
Trigger: AAGAAGTGGAAATGTTGCCCAGGACATCTTCAAAAG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTATCTGACAGATATTTCTaGCATATTTCTGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: FSPGSMTCICLDISARQLSDRYF*HISEGA
Trigger: AGCACCTTCAGAAATATGCCAGAAATATCTGTCAGA...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCGACTTTTCAATTTCCTaGGCAGACTGGATACTCTGT +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFDFSIS*ADWILC
Trigger: ACAGAGTATCCAGTCTGCCCAGGAAATTGAAAAGTC...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGACGTTGTTCAAAATTaGCTGGTTTTTGGAATAATC +
Preference number: 4 (lower is better)
Translates to: CHIKEREREKARPEPNFNDVVQN*LVFGII
Trigger: GATTATTCCAAAAACCAGCCAATTTTGAACAACGTC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGGTTCATCAAGCTCTTTaGGATTTTCTGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKVHQAL*DFLSAF
Trigger: AAAAGCAGACAGAAAATCCCAAAGAGCTTGATGAAC...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGAACTGTCTTGGGATTTaGATAGAATCATGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWNCLGI*IESCRR
Trigger: TCTTCTGCATGATTCTATTCAAATCCCAAGACAGTT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTTTCCACTTCAGACTTaGCTTCACTCAGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFFPLQT*LHSGFY
Trigger: ATAAAAGCCTGAGTGAAGTCAAGTCTGAAGTGGAAA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTTTTTCTGTACAATTTaGCGTCCGGTTTTAATCACC +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWFFCTI*RPVLIT
Trigger: GGTGATTAAAACCGGACGTCAAATTGTACAGAAAAA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCTTTTTCTGTACAATTTaGCGTCCGGTTTTAATCACC +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLFFCTI*RPVLIT
Trigger: GGTGATTAAAACCGGACGTCAAATTGTACAGAAAAA...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCTAAAATCTTTTAAGTaGACCTCAAGCTCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLLKSFK*TSSSPC
Trigger: ACAAGGAGAGCTTGAGGTTCACTTAAAAGATTTTAG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGCACCATCACTCTCTGTaGTTTTATAACTCGATCAAG +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVHHHSL*FYNSIK
Trigger: CTTGATCGAGTTATAAAATCACAGAGAGTGATGGTG...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGAAGTTCACTCCACTTaGAATTCATGTTATCCAAAC +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWEVHST*NSCYPN
Trigger: GTTTGGATAACATGAATTTCAAGTGGAGTGAACTTC...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATCACATTTTTGACCTaGCAGTGGAGGATTATATTC +
Preference number: 4 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDITFLT*QWRIIF
Trigger: GAATATAATCCTCCACTGGCAGGTCAAAAATGTGAT...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTTTTCACTGTTGGTTTaGTGCAATCCAGCCATGATA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFFSLLV*CNPAMI
Trigger: TATCATGGCTGGATTGCAGCAAACCAACAGTGAAAA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCTCTGCTTTTTCTCGTaGTATGGCATTGACTTTTTC +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFLCFFS*YGIDFF
Trigger: GAAAAAGTCAATGCCATAGCACGAGAAAAAGCAGAG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCAATAGCAATGTTATCTaGTTCTTCCAGCCACAAAAC +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLNSNVI*FFQPQN
Trigger: GTTTTGTGGCTGGAAGAAGCAGATAACATTGCTATT...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGTCTTCACTGGCTGAGTaGTTGGTTTTTCCTTATACA +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVSSLAE*LVFPYT
Trigger: TGTATAAGGAAAAACCAAGCACTCAGCCAGTGAAGA...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTCTTCACTGGCTGAGTaGTTGGTTTTTCCTTATACA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFSSLAE*LVFPYT
Trigger: TGTATAAGGAAAAACCAAGCACTCAGCCAGTGAAGA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCCTGAATCCAATGATTaGACACTCCTTACAGATGTT +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFPESND*TLLTDV
Trigger: AACATCTGTAAGGAGTGTCCAATCATTGGATTCAGG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCGTTCATCAAGCTCTTTaGGATTTTCTGTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLVHQAL*DFLSAF
Trigger: AAAAGCAGACAGAAAATCCCAAAGAGCTTGATGAAC...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCACTGGCTGAGTGCTTaGTTTTTCCTTATACAAATG +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFHWLSA*FFLIQM
Trigger: CATTTGTATAAGGAAAAACCAAGCACTCAGCCAGTG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAACTGTCTTGGGATTTaGATAGAATCATGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFNCLGI*IESCRR
Trigger: TCTTCTGCATGATTCTATTCAAATCCCAAGACAGTT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR TCA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTGTTCTAGATCTTCTTaGAGCACCTTATGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFCSRSS*STLCCC
Trigger: ACAACAACATAAGGTGCTTCAAGAAGATCTAGAACA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCAAGAAGTTTTTCTATaGCTAACTGGCATTTTGCAA +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWQEVFL*LTGILQ
Trigger: TTGCAAAATGCCAGTTAGGCATAGAAAAACTTCTTG...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR GCA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGATATCTGAGTTAAACTaGTCCAATTCCTTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: VESLKLETSGALDNILVWISELN*SNSFKG
Trigger: TCCTTTGAAGGAATTGGAGCAGTTTAACTCAGATAT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR GCA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGTTTTCCTTATACAAATaGTGCCCTTTCGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVFSLYK*CPFDKS
Trigger: GCTTTTGTCGAAAGGGCAGCATTTGTATAAGGAAAA...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CCA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGACGTTGTTCAAAATTaGCTGGTTTTTGGAATAATC +
Preference number: 4 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSDVVQN*LVFGII
Trigger: GATTATTCCAAAAACCAGCCAATTTTGAACAACGTC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
3UTR CAA 72 bp CATTATGACACTGTCATGCATACATATCATTGTGCCTaGCTCAAATTCCTTCTCACTATGATCATTCATCTA +
Preference number: 4 (lower is better)
Translates to: HYDTVMHTYHCA*LKFLLTMIIHL
Trigger: TAGATGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp AATTTGCCGCCAGCGCTTGCTGAGCTGGATCTGAGTTGGCTCCACTaGCATTGCGGCCCCATTCTCAGACAAGCCCTCAGCTTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: NLPPALAELDLSWLH*HCGPILRQALSLPA
Trigger: CGCAGGCAAGCTGAGGGCTTGTCTGAGAATGGGGCCGCAATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGCAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 90 bp ATTGCTCTCAATTTGCCGCCAGCGCTTGCTGAGCTGGATCTGAGTTaGCTCCACTGCCATTGCGGCCCCATTCTCAGACAAGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: IALNLPPALAELDLS*LHCHCGPILRQALS
Trigger: GCTGAGGGCTTGTCTGAGAATGGGGCCGCAATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGCAAATTGAGAGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp GCAAAATTGCTCTCAATTTGCCGCCAGCGCTTGCTGAGCTGGATCTaGGTTGGCTCCACTGCCATTGCGGCCCCATTCTCAGACAAGCCC +
Preference number: 5 (lower is better)
Translates to: AKLLSICRQRLLSWI*VGSTAIAAPFSDKP
Trigger: GGGCTTGTCTGAGAATGGGGCCGCAATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGCAAATTGAGAGCAATTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 90 bp ACTGAAGTGGAAAGGAAGTGCTGGGATGCAGGACCAAAGTCCCTGTaGGCTTCATGCAGCTGTCTGACACGGTCCTCCACAGCCACCTGT +
Preference number: 5 (lower is better)
Translates to: TEVERKCWDAGPKSL*ASCSCLTRSSTATC
Trigger: ACAGGTGGCTGTGGAGGACCGTGTCAGACAGCTGCATGAAGCCCACAGGGACTTTGGTCCTGCATCCCAGCACTTCCTTTCCACTTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp GGCTCCACTGCCATTGCGGCCCCATTCTCAGACAAGCCCTCAGCTTaGCTGCGCACTGCATTCAGCTCCTCTTTCTTCTTCTGCAATTCA +
Preference number: 5 (lower is better)
Translates to: GSTAIAAPFSDKPSA*LRTAFSSSFFFCNS
Trigger: TGAATTGCAGAAGAAGAAAGAGGAGCTGAATGCAGTGCGCAGGCAAGCTGAGGGCTTGTCTGAGAATGGGGCCGCAATGGCAGTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 90 bp TGGTCTTCCAGGATTTGCATCCTGGCTTCCAGGCGTCCTTTGTGTTaGCGCAGTAGCTTAGCCTCAGCAATGAGCTCAGCATCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: WSSRICILASRRPLC*RSSLASAMSSASLG
Trigger: TCCCAGGGATGCTGAGCTCATTGCTGAGGCTAAGCTACTGCGCCAACACAAAGGACGCCTGGAAGCCAGGATGCAAATCCTGGAAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CCA 90 bp CCAGGGGCACGGTCAGGCTGCTTTGTCCTCAGCTCCCGAAGTAAATaGTTTACAGCCTCCCACTCAGACCTCAGATCTTCTAACTTCCTC +
Preference number: 5 (lower is better)
Translates to: PGARSGCFVLSSRSK*FTASHSDLRSSNFL
Trigger: GAGGAAGTTAGAAGATCTGAGGTCTGAGTGGGAGGCTGTAAACCATTTACTTCGGGAGCTGAGGACAAAGCAGCCTGACCGTGCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATCAGCTTGGCGCAACTaGAGGTCCAGTTCATCGGCA +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRASAWRN*RSSSSA
Trigger: TGCCGATGAACTGGACCTCAAGTTGCGCCAAGCTGA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp GTCATTTTGCTTGAGGTTGTGCTGGTCCAGGGCATCACATGCAGCTaGCAGGCTCAAGAGATCCAAGCAAAGGGCCTTCTGGAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: VILLEVVLVQGITCS*QAQEIQAKGLLEPS
Trigger: AGAAGGCTCCAGAAGGCCCTTTGCTTGGATCTCTTGAGCCTGTCAGCTGCATGTGATGCCCTGGACCAGCACAACCTCAAGCAAAATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS TCA 90 bp TTCGAAACTGAGCAAAATTGCTCTCAATTTGCCGCCAGCGCTTGCTaGGCTGGATCTGAGTTGGCTCCACTGCCATTGCGGCCCCATTCT +
Preference number: 5 (lower is better)
Translates to: FETEQNCSQFAASAC*AGSELAPLPLRPHS
Trigger: AGAATGGGGCCGCAATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGCAAATTGAGAGCAATTTTGCTCAGTTTCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 90 bp CGACGGTTGAGCTCAGAGATTTGGGGCTCTACTACTTTCCTGCAGTaGTCACCGCGGTTTGCCATCAATTTTGCTGCTTGGTCACGTGTG +
Preference number: 5 (lower is better)
Translates to: RRLSSEIWGSTTFLQ*SPRFAINFAAWSRV
Trigger: CACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAGCCCCAAATCTCTGAGCTCAACCGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCCTTGATCACCTCAGCTaGGCGCAACTTGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCLDHLS*AQLEVQ
Trigger: CTGGACCTCAAGTTGCGCCAAGCTGAGGTGATCAAG...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp CTCTACTACTTTCCTGCAGTGGTCACCGCGGTTTGCCATCAATTTTaGTGCTTGGTCACGTGTGGAGTCCACCTTTGGGCGCATGTCATT +
Preference number: 5 (lower is better)
Translates to: LYYFPAVVTAVCHQF*CLVTCGVHLWAHVI
Trigger: AATGACATGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp AGAGATTTGGGGCTCTACTACTTTCCTGCAGTGGTCACCGCGGTTTaGCATCAATTTTGCTGCTTGGTCACGTGTGGAGTCCACCTTTGG +
Preference number: 5 (lower is better)
Translates to: RDLGLYYFPAVVTAV*HQFCCLVTCGVHLW
Trigger: CCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAGCCCCAAATCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATCATTTTGCTTGAGGTaGTGCTGGTCCAGGGCATCA +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRASFCLR*CWSRAS
Trigger: TGATGCCCTGGACCAGCACAACCTCAAGCAAAATGA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAGGTTTGCCATCAATTTaGCTGCTTGGTCACGTGTGG +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAGLPSI*LLGHVW
Trigger: CCACACGTGACCAAGCAGCAAAATTGATGGCAAACC...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTTGGCTCCACTGCCATaGCGGCCCCATTCTCAGACA +
Preference number: 5 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLAPLP*RPHSQT
Trigger: TGTCTGAGAATGGGGCCGCAATGGCAGTGGAGCCAA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAAAAATTGCTCTCAATTaGCCGCCAGCGCTTGCTGAG +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAKIALN*PPALAE
Trigger: CTCAGCAAGCGCTGGCGGCAAATTGAGAGCAATTTT...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCGAGCGCAGGTTCAATTaGTCCCATTCAGCGTTGACC +
Preference number: 5 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCERRFN*SHSALT
Trigger: GGTCAACGCTGAATGGGACAAATTGAACCTGCGCTC...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCACGGGAGTTTCCATGTaGTCCCCCTCTAACACAGTC +
Preference number: 5 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCTGVSM*SPSNTV
Trigger: GACTGTGTTAGAGGGGGACAACATGGAAACTCCCGT...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp ACAGTTTCCTTAGTAACCACAGATTGTGTCACTAGAGTAACAGTCTaGCTGGCAGAGGCTCCAGTAGTGCTCAGTCCAGGGGCACGGTCA +
Preference number: 5 (lower is better)
Translates to: TVSLVTTDCVTRVTV*LAEAPVVLSPGARS
Trigger: TGACCGTGCCCCTGGACTGAGCACTACTGGAGCCTCTGCCAGTCAGACTGTTACTCTAGTGACACAATCTGTGGTTACTAAGGAAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 90 bp ACTTTCCTGCAGTGGTCACCGCGGTTTGCCATCAATTTTGCTGCTTaGTCACGTGTGGAGTCCACCTTTGGGCGCATGTCATTCATTTCA +
Preference number: 5 (lower is better)
Translates to: TFLQWSPRFAINFAA*SRVESTFGRMSFIS
Trigger: TGAAATGAATGACATGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCGCTTCCAGGCGTCCTTaGTGTTGGCGCAGTAGCTTA +
Preference number: 5 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTASRRP*CWRSSL
Trigger: TAAGCTACTGCGCCAACACAAAGGACGCCTGGAAGC...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAGACTCCAGCTGTTTATaGTGGTCTTCCAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRADSSCL*WSSRIC
Trigger: GCAAATCCTGGAAGACCACAATAAACAGCTGGAGTC...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAGAACTAGGGAAGGAGTaGTTGAGTTGCTCCATCACT +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAELGKE*LSCSIT
Trigger: AGTGATGGAGCAACTCAACAACTCCTTCCCTAGTTC...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCACAGCTAGAGGTGAAGTaGATGACGTTAACCTGTGGA +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAQLEVK*MTLTCG
Trigger: TCCACAGGTTAACGTCATCAACTTCACCTCTAGCTG...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTCACGGTCAGGCTGCTTaGTCCTCAGCTCCCGAAGTA +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLHGQAA*SSAPEV
Trigger: TACTTCGGGAGCTGAGGACAAAGCAGCCTGACCGTG...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAAGATTCGTTTCCATGTaGTCCCCCTCTAACACAGTC +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRARFVSM*SPSNTV
Trigger: GACTGTGTTAGAGGGGGACAACATGGAAACGAATCT...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS GCA 90 bp TCAGGAGGAGATGGCAGTGGAGACAGGCCTTTATGCTCATGCTGCTaGTTCAGGCGATCATATTCTGCTTGCAGATTCCTGTTTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SGGDGSGDRPLCSCC*FRRSYSACRFLFSS
Trigger: GGAAGAAAACAGGAATCTGCAAGCAGAATATGATCGCCTGAAGCAGCAGCATGAGCATAAAGGCCTGTCTCCACTGCCATCTCCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp CAATTCCCTCTTGAAGGCCCTATGTATATCATTCTGCTTCTGAACTaGTGGGAAATCACCACCGATGGGTGCCTGACGGCTCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: QFPLEGPMYIILLLN*WEITTDGCLTAQFI
Trigger: GATGAACTGAGCCGTCAGGCACCCATCGGTGGTGATTTCCCAGCAGTTCAGAAGCAGAATGATATACATAGGGCCTTCAAGAGGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp TCAGGAGGAGATGGCAGTGGAGACAGGCCTTTATGCTCATGCTGCTaGTTCAGGCGATCATATTCTGCTTGCAGATTCGTTTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: SGGDGSGDRPLCSCC*FRRSYSACRFVSML
Trigger: CAACATGGAAACGAATCTGCAAGCAGAATATGATCGCCTGAAGCAGCAGCATGAGCATAAAGGCCTGTCTCCACTGCCATCTCCTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS CCA 90 bp AGTGGTCACCGCGGTTTGCCATCAATTTTGCTGCTTGGTCACGTGTaGAGTCCACCTTTGGGCGCATGTCATTCATTTCAGCCTTTAAAC +
Preference number: 5 (lower is better)
Translates to: SGHRGLPSILLLGHV*SPPLGACHSFQPLN
Trigger: GTTTAAAGGCTGAAATGAATGACATGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 90 bp TTCCCTCTTGAAGGCCCTATGTATATCATTCTGCTTCTGAACTGCTaGGAAATCACCACCGATGGGTGCCTGACGGCTCAGTTCATCATC +
Preference number: 5 (lower is better)
Translates to: FPLEGPMYIILLLNC*EITTDGCLTAQFII
Trigger: GATGATGAACTGAGCCGTCAGGCACCCATCGGTGGTGATTTCCCAGCAGTTCAGAAGCAGAATGATATACATAGGGCCTTCAAGAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGGCTGGTCATTTTGCTaGAGGTTGTGCTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLGWSFC*RLCWSR
Trigger: CCTGGACCAGCACAACCTCAAGCAAAATGACCAGCC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCCATGGGCTGGTCATTTaGCTTGAGGTTGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTHGLVI*LEVVLV
Trigger: GACCAGCACAACCTCAAGCAAAATGACCAGCCCATG...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCGCTTCCAGGCGTCCTTaGTGTTGGCGCAGTAGCTTA +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCASRRP*CWRSSL
Trigger: TAAGCTACTGCGCCAACACAAAGGACGCCTGGAAGC...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAAGGTCACTGAAGAGGTaGTCTATGTGTTGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRARSLKR*SMCCFP
Trigger: TGGAAAGCAACACATAGACAACCTCTTCAGTGACCT...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCGTTGAGCTCAGAGATTaGGGGCTCTACTACTTTCCT +
Preference number: 5 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCVELRD*GLYYFP
Trigger: AGGAAAGTAGTAGAGCCCCAAATCTCTGAGCTCAAC...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCACGGTCAGGCTGCTTaGTCCTCAGCTCCCGAAGTA +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVHGQAA*SSAPEV
Trigger: TACTTCGGGAGCTGAGGACAAAGCAGCCTGACCGTG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTCTACTGGCCAGAAGTaGATCAGAGTAACGGGAGTT +
Preference number: 5 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCSTGQK*IRVTGV
Trigger: AACTCCCGTTACTCTGATCAACTTCTGGCCAGTAGA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAAAAAGGCTTCCTACATaGTGTCCTCTTGAACTAGGG +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAKRLPT*CPLELG
Trigger: CCCTAGTTCAAGAGGACACAATGTAGGAAGCCTTTT...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS TCA 90 bp CTTTCAGCATTAACACCCTCATTTGCCATCTGTTCCACCAGGGCCTaGGCTGATCTGCTGGCATCTTGCAGTTTTCTGAACTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LSALTPSFAICSTRA*ADLLASCSFLNFSA
Trigger: AGCAGAGAAGTTCAGAAAACTGCAAGATGCCAGCAGATCAGCTCAGGCCCTGGTGGAACAGATGGCAAATGAGGGTGTTAATGCTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 90 bp TTTCAATTTCTCCTTGGAGATCTTGCCATGGTTTCATCAGCTCTCTaGCTCCCCTGGAGTCTTCTAGGAGCTTCTCCTTACGGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: FQFLLGDLAMVSSAL*LPWSLLGASPYGKR
Trigger: ACGCTTCCCGTAAGGAGAAGCTCCTAGAAGACTCCAGGGGAGTCAGAGAGCTGATGAAACCATGGCAAGATCTCCAAGGAGAAATTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp CCACCTGTAGAAGCCTCCATCTGGTATTCAGATCTTCCAAAGTGCTaGGGTTATAAGGTGAGAGCTGAATGCCCAGTGTGGTCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: PPVEASIWYSDLPKC*GYKVRAECPVWSAD
Trigger: ATCAGCTGACCACACTGGGCATTCAGCTCTCACCTTATAACCTCAGCACTTTGGAAGATCTGAATACCAGATGGAGGCTTCTACAGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp TGCCCTGTAAGGCCTTCCAAGAGGTCTAGGAGGCGTTTTCCATCCTaGAGGTCACTGAAGAGGTTGTCTATGTGTTGCTTTCCAAACTTA +
Preference number: 5 (lower is better)
Translates to: CPVRPSKRSRRRFPS*RSLKRLSMCCFPNL
Trigger: TAAGTTTGGAAAGCAACACATAGACAACCTCTTCAGTGACCTGCAGGATGGAAAACGCCTCCTAGACCTCTTGGAAGGCCTTACAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTCATGGGCTGGTCATTTaGCTTGAGGTTGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLHGLVI*LEVVLV
Trigger: GACCAGCACAACCTCAAGCAAAATGACCAGCCCATG...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCACAGATTGTTGTGCTCTaGCTCCAGACGATCATAAAT +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAQIVVL*LQTIIN
Trigger: ATTTATGATCGTCTGGAGCAAGAGCACAACAATCTG...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGCTTCCAGGCGTCCTTaGTGTTGGCGCAGTAGCTTA +
Preference number: 5 (lower is better)
Translates to: PVPHKGERERESKTRTKFASRRP*CWRSSL
Trigger: TAAGCTACTGCGCCAACACAAAGGACGCCTGGAAGC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCTTCTAACCCTGTGCTaGTGTCCTGGGGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVLLTLC*CPGEDS
Trigger: TGAGTCCTCCCCAGGACACAAGCACAGGGTTAGAAG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCTTCTAACCCTGTGCTaGTGTCCTGGGGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: PVPHKGERERESKTRTKFLLTLC*CPGEDS
Trigger: TGAGTCCTCCCCAGGACACAAGCACAGGGTTAGAAG...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCATGGCATTTTGCAATGTaGAAGGCATGTTCCAGTCTT +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAWHFAM*KACSSL
Trigger: AAGACTGGAACATGCCTTCAACATTGCAAAATGCCA...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTCCTGTTCAACACTCTaGGTTTCCAATGCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCSCSTL*VSNAGK
Trigger: TTTGCCTGCATTGGAAACCAAGAGTGTTGAACAGGA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTGCTGCAAATCGACGGTaGAGCTCAGAGATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVAANRR*SSEIWG
Trigger: GCCCCAAATCTCTGAGCTCAACCGTCGATTTGCAGC...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTTGTTCTGACAACAGCTaGACGCTGCCCAATGCCATC +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLCSDNS*TLPNAI
Trigger: GATGGCATTGGGCAGCGTCAAGCTGTTGTCAGAACA...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTTGTCCCATTCAGCGTaGACCTCTTCAGCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLSHSA*TSSACF
Trigger: AAAGCAGGCTGAAGAGGTCAACGCTGAATGGGACAA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGGGCTGCCAGGATCCCTaGATCACCTCAGCTTGGCGC +
Preference number: 5 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKGCQDP*ITSAWR
Trigger: GCGCCAAGCTGAGGTGATCAAGGGATCCTGGCAGCC...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp GATCTTCTTTTGGATTGCATCTACTGTGTGAGGACCTTCTTTCCATaGGTCAAGCTTGCCTCTGACCTGTCCTATGACCTGTTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: DLLLDCIYCVRTFFP*VKLASDLSYDLFGF
Trigger: GAAGCCGAACAGGTCATAGGACAGGTCAGAGGCAAGCTTGACTCATGGAAAGAAGGTCCTCACACAGTAGATGCAATCCAAAAGAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCCAGATTGTTGTGCTCTaGCTCCAGACGATCATAAAT +
Preference number: 5 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCQIVVL*LQTIIN
Trigger: ATTTATGATCGTCTGGAGCAAGAGCACAACAATCTG...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGGGACATTGACCAGATaGTTGTGCTCTTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLGTLTR*LCSCSR
Trigger: TCTGGAGCAAGAGCACAACAATCTGGTCAATGTCCC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCGGGACATTGACCAGATaGTTGTGCTCTTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCGTLTR*LCSCSR
Trigger: TCTGGAGCAAGAGCACAACAATCTGGTCAATGTCCC...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCACAACTGTCTTGGGATTaGAATAGAATCATGCAGAAG +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAQLSWD*NRIMQK
Trigger: CTTCTGCATGATTCTATTCAAATCCCAAGACAGTTG...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTAAGACCCGCAGTGCCTaGTTGACATTGTTCAGGGCA +
Preference number: 5 (lower is better)
Translates to: PVPHKGERERESKTRTKFKTRSA*LTLFRA
Trigger: TGCCCTGAACAATGTCAACAAGGCACTGCGGGTCTT...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAATTACCAACAAGTCCTaGATGAGATGTCAGATCCAT +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAITNKS*MRCQIH
Trigger: ATGGATCTGACATCTCATCAAGGACTTGTTGGTAAT...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCAGCAGGCAAATGCATCTaGACTTCATCTAAAATCATC +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRAAGKCI*TSSKII
Trigger: GATGATTTTAGATGAAGTCAAGATGCATTTGCCTGC...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTGGTCACCGCGGTTaGCCATCAATTTTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCSGHRG*PSILLL
Trigger: AAGCAGCAAAATTGATGGCAAACCGCGGTGACCACT...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTAGTGGTCACCGCGGTTaGCCATCAATTTTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLSGHRG*PSILLL
Trigger: AAGCAGCAAAATTGATGGCAAACCGCGGTGACCACT...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCGTTGAGCTCAGAGATTaGGGGCTCTACTACTTTCCT +
Preference number: 5 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTVELRD*GLYYFP
Trigger: AGGAAAGTAGTAGAGCCCCAAATCTCTGAGCTCAAC...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp GATAAGGTACAGAGAGTTTGCTTTCTGACTGCTGGATCCACGTCCTaGTGCTACTCATTGTCTCCTGATAGCGCATTGGTGGTAAAGTGT +
Preference number: 5 (lower is better)
Translates to: DKVQRVCFLTAGSTS*CYSLSPDSALVVKC
Trigger: ACACTTTACCACCAATGCGCTATCAGGAGACAATGAGTAGCATCAGGACGTGGATCCAGCAGTCAGAAAGCAAACTCTCTGTACCTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 90 bp CGGCTCAGTTCATCATCTTTCAGCTGTAGCCAAACAAGAAGTTCCTaGAGAGAAAGATGCAAACGCTTCCACTGGTCAGAACTTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RLSSSSFSCSQTRSS*RERCKRFHWSELAS
Trigger: GGAAGCAAGTTCTGACCAGTGGAAGCGTTTGCATCTTTCTCTTCAGGAACTTCTTGTTTGGCTACAGCTGAAAGATGATGAACTGAGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp CCATCGATCTCCCAGTACCTTAAGTTGTTCTTCCAAAGCAGCTGTTaGATGATCACCGCTGGATTCATCAACCACTACTACCATGTGAGT +
Preference number: 5 (lower is better)
Translates to: PSISQYLKLFFQSSC*MITAGFINHYYHVS
Trigger: ACTCACATGGTAGTAGTGGTTGATGAATCCAGCGGTGATCATGCAACAGCTGCTTTGGAAGAACAACTTAAGGTACTGGGAGATCGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS GCA 90 bp ATCATCAGCAGAATAGTCCCGAAGAAGTTTCAGTGCCAAATCATTTaGCACGTCTACACTTATCTGCCGTTGACGGAGGTCTTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: IISRIVPKKFQCQII*HVYTYLPLTEVFGQ
Trigger: TTGGCCAAAGACCTCCGTCAACGGCAGATAAGTGTAGACGTGGCAAATGATTTGGCACTGAAACTTCTTCGGGACTATTCTGCTGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 90 bp GATTTACTTCCGTCTCCATCAATGAACTGTCAAGTGACTTGTCTCTaGGAGCTTCCAAATGCTGTGAAGGATAGGGGCTCTGTGTGGAAT +
Preference number: 5 (lower is better)
Translates to: DLLPSPSMNCQVTCL*ELPNAVKDRGSVWN
Trigger: ATTCCACACAGAGCCCCTATCCTTCACAGCATTTGGAAGCTCCCAGAGACAAGTCACTTGACAGTTCATTGATGGAGACGGAAGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS CCA 90 bp TATGTATATCATTCTGCTTCTGAACTGCTGGGAAATCACCACCGATaGGTGCCTGACGGCTCAGTTCATCATCTTTCAGCTGTAGCCAAA +
Preference number: 5 (lower is better)
Translates to: YVYHSASELLGNHHR*VPDGSVHHLSAVAK
Trigger: TTTGGCTACAGCTGAAAGATGATGAACTGAGCCGTCAGGCACCCATCGGTGGTGATTTCCCAGCAGTTCAGAAGCAGAATGATATACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCTTTATTATTGGCAAATaGGAAGCAGCTCCTGACACT +
Preference number: 5 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCFIIGK*EAAPDT
Trigger: AGTGTCAGGAGCTGCTTCCAATTTGCCAATAATAAA...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCTTCTAACCCTGTGCTaGTGTCCTGGGGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNLLTLC*CPGEDS
Trigger: TGAGTCCTCCCCAGGACACAAGCACAGGGTTAGAAG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTCTGAAGGTGCTTTCTaGGCCATCTCCTTCACAGTG +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVSEGAF*AISFTV
Trigger: CACTGTGAAGGAGATGGCCAAGAAAGCACCTTCAGA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCATAGACGAATCTGATTaGGGTTCTCCTCTGAATGAT +
Preference number: 5 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCIDESD*GSPLND
Trigger: ATCATTCAGAGGAGAACCCAAATCAGATTCGTCTAT...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAATGAGTTCTTCCAATaGGGGGCGTCTCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCNEFFQ*GASLFQ
Trigger: TTGGAACAGAGACGCCCCCAATTGGAAGAACTCATT...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATGTGCTGCCTCAGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTCGTGCACTTCCAGCCATTGTGTaGAATCCTTTAACATTTCAT +
Preference number: 5 (lower is better)
Translates to: NVLPQCVCVCVCVWWVRALPAIV*NPLTFH
Trigger: ATGAAATGTTAAAGGATTCAACACAATGGCTGGAAG...TGCACGAACCCACCACACACACACACACACACACACACACTGAGGCAGCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTTCCATGAGTCAAGCTaGCCTCTGACCTGTCCTATG +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVFHESS*PLTCPM
Trigger: CATAGGACAGGTCAGAGGCAAGCTTGACTCATGGAA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCGGCTGCCAGGATCCCTaGATCACCTCAGCTTGGCGC +
Preference number: 5 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFGCQDP*ITSAWR
Trigger: GCGCCAAGCTGAGGTGATCAAGGGATCCTGGCAGCC...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGACGGGAGTTTCCATGTaGTCCCCCTCTAACACAGTC +
Preference number: 5 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQTGVSM*SPSNTV
Trigger: GACTGTGTTAGAGGGGGACAACATGGAAACTCCCGT...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTAGTGTGGCGGTAGTCTCCTGGCTTTGGGCTCCAGGGAAAATTCACTCTTGCCTGTTCAAGCAACTTTaGTTTCCTCACAGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: FSVAVVSWLWAPGKIHSCLFKQL*FPHSLF
Trigger: AAAAAGGCTGTGAGGAAACAAAAGTTGCTTGAACAG...GCAAGAGTGAATTTTCCCTGGAGCCCAAAGCCAGGAGACTACCGCCACACTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239269.2
CDS GCA 90 bp ATCCCACTGAGTGTTAAGCTCTCTAAGTTCTGTCTCCAGTCTGGATaGAAACTCAAGTTCAGCTTCACTCTTTATCTTCTGCCCACCTTC +
Preference number: 5 (lower is better)
Translates to: IPLSVKLSKFCLQSG*KLKFSFTLYLLPTF
Trigger: GAAGGTGGGCAGAAGATAAAGAGTGAAGCTGAACTTGAGTTTGCATCCAGACTGGAGACAGAACTTAGAGAGCTTAACACTCAGTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS CCA 90 bp GAGTTCAGAATCCACAGTTATCTGCCTCTTCTTTTGAGGAGGTGGTaGTGGAAGTTCCTCTTGGGCATGTTTTACCATGATTTGTTCCCT +
Preference number: 5 (lower is better)
Translates to: EFRIHSYLPLLLRRW*WKFLLGMFYHDLFP
Trigger: AGGGAACAAATCATGGTAAAACATGCCCAAGAGGAACTTCCACCACCACCTCCTCAAAAGAAGAGGCAGATAACTGTGGATTCTGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS CCA 90 bp CCTGAGTTCAGAATCCACAGTTATCTGCCTCTTCTTTTGAGGAGGTaGTGGTGGAAGTTCCTCTTGGGCATGTTTTACCATGATTTGTTC +
Preference number: 5 (lower is better)
Translates to: PEFRIHSYLPLLLRR*WWKFLLGMFYHDLF
Trigger: GAACAAATCATGGTAAAACATGCCCAAGAGGAACTTCCACCACCACCTCCTCAAAAGAAGAGGCAGATAACTGTGGATTCTGAACTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCATGGGCTGGTCATTTaGCTTGAGGTTGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNHGLVI*LEVVLV
Trigger: GACCAGCACAACCTCAAGCAAAATGACCAGCCCATG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTGAACTAGGGAAGGAGTaGTTGAGTTGCTCCATCACT +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVELGKE*LSCSIT
Trigger: AGTGATGGAGCAACTCAACAACTCCTTCCCTAGTTC...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTGTGGATAATTACGTGTaGACTGTCGAACCCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PVPHKGERERESKTRTKFVDNYV*TVEPSS
Trigger: TGAGCTGGGTTCGACAGTCAACACGTAATTATCCAC...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTCCGTTTCCATTACAGTaGTCTGTGTTAGGGATGGTT +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLPFPLQ*SVLGMV
Trigger: AACCATCCCTAACACAGACAACTGTAATGGAAACGG...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCTGTTCAAGCAACTTTaGTTTCCTCACAGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCLFKQL*FPHSLF
Trigger: GAAGAGGCTGTGAGGAAACAAAAGTTGCTTGAACAG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTTTTCTCAATCTCTTTTaGAGTAGCCTTTCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLFLNLF*SSLSPG
Trigger: GCCTGGGGAAAGGCTACTCAAAAAGAGATTGAGAAA...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGGTGTGGAGTCCACCTTaGGGCGCATGTCATTCATTT +
Preference number: 5 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQVWSPP*GACHSF
Trigger: AAATGAATGACATGCGCCCAAAGGTGGACTCCACAC...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGAGACAAGCCCTCAGCTaGCCTGCGCACTGCATTCAG +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWRQALS*PAHCIQ
Trigger: CTGAATGCAGTGCGCAGGCAAGCTGAGGGCTTGTCT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACAGACAAGCCCTCAGCTaGCCTGCGCACTGCATTCAG +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDRQALS*PAHCIQ
Trigger: CTGAATGCAGTGCGCAGGCAAGCTGAGGGCTTGTCT...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTTGGCTCCACTGCCATaGCGGCCCCATTCTCAGACA +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLAPLP*RPHSQT
Trigger: TGTCTGAGAATGGGGCCGCAATGGCAGTGGAGCCAA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCATGGAGGTGGCACTTaGCAAGGCTGCTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNHGGGT*QGCCLL
Trigger: AAGAAGACAGCAGCCTTGCAAAGTGCCACCTCCATG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCCTTTCCACATCCGCTaGTTTACCGTGAACTGTTAC +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVPFHIR*FTVNCY
Trigger: GTAACAGTTCACGGTAAACAAGCGGATGTGGAAAGG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCTCTTTGGCCAACTGCTaGGTTTCTGTGATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTSLANC*VSVIFF
Trigger: AAAGAAGATCACAGAAACCAAGCAGTTGGCCAAAGA...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGCTTGATCACCTCAGCTaGGCGCAACTTGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKLDHLS*AQLEVQ
Trigger: CTGGACCTCAAGTTGCGCCAAGCTGAGGTGATCAAG...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTCTACTGGCCAGAAGTaGATCAGAGTAACGGGAGTT +
Preference number: 5 (lower is better)
Translates to: PVPHKGERERESKTRTKFSTGQK*IRVTGV
Trigger: AACTCCCGTTACTCTGATCAACTTCTGGCCAGTAGA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp CAGGATCAAGAAGTTTTTCTATGCCTAACTGGCATTTTGCAATGTTaGAGGCATGTTCCAGTCTTTGGGTGGCTGAGTGCTGTGAAACCA +
Preference number: 5 (lower is better)
Translates to: QDQEVFLCLTGILQC*RHVPVFGWLSAVKP
Trigger: TGGTTTCACAGCACTCAGCCACCCAAAGACTGGAACATGCCTTCAACATTGCAAAATGCCAGTTAGGCATAGAAAAACTTCTTGATCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 90 bp CCAGGCAACTTCAGAATCCAAATTACTTGGCATTCCTTCAACTGCTaGTCTCTTCGTCAATTCTGTATCTGTTGCTGCCAGCCATTCTGT +
Preference number: 5 (lower is better)
Translates to: PGNFRIQITWHSFNC*SLRQFCICCCQPFC
Trigger: ACAGAATGGCTGGCAGCAACAGATACAGAATTGACGAAGAGATCAGCAGTTGAAGGAATGCCAAGTAATTTGGATTCTGAAGTTGCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp CAAAGGAATGGAGGCCTTTCCAGTCTTAATTCTGTGAGAAATAGCTaGAAATCGACGGTTGAGCTCAGAGATTTGGGGCTCTACTACTTT +
Preference number: 5 (lower is better)
Translates to: QRNGGLSSLNSVRNS*KSTVELRDLGLYYF
Trigger: AAAGTAGTAGAGCCCCAAATCTCTGAGCTCAACCGTCGATTTGCAGCTATTTCTCACAGAATTAAGACTGGAAAGGCCTCCATTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp TACTTTTCTGGTATCATCAGCAGAATAGTCCCGAAGAAGTTTCAGTaGCAAATCATTTGCCACGTCTACACTTATCTGCCGTTGACGGAG +
Preference number: 5 (lower is better)
Translates to: YFSGIISRIVPKKFQ*QIICHVYTYLPLTE
Trigger: CTCCGTCAACGGCAGATAAGTGTAGACGTGGCAAATGATTTGGCACTGAAACTTCTTCGGGACTATTCTGCTGATGATACCAGAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 90 bp TTCAGAATCCACAGTTATCTGCCTCTTCTTTTGAGGAGGTGGTGGTaGAAGTTCCTCTTGGGCATGTTTTACCATGATTTGTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: FRIHSYLPLLLRRWW*KFLLGMFYHDLFPC
Trigger: ACAAGGGAACAAATCATGGTAAAACATGCCCAAGAGGAACTTCCACCACCACCTCCTCAAAAGAAGAGGCAGATAACTGTGGATTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTCATTTTGCTTGAGGTaGTGCTGGTCCAGGGCATCA +
Preference number: 5 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMSFCLR*CWSRAS
Trigger: TGATGCCCTGGACCAGCACAACCTCAAGCAAAATGA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACATGGGCTGGTCATTTaGCTTGAGGTTGTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: FSPGSMTCICLDISARQLHGLVI*LEVVLV
Trigger: GACCAGCACAACCTCAAGCAAAATGACCAGCCCATG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGAACTTGCCACTTGCTaGAAAAGGTATCTGTACTTG +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLELATC*KRYLYL
Trigger: CAAGTACAGATACCTTTTCAAGCAAGTGGCAAGTTC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGGATGTTACACTTGGCTaGATGCTTGGCAGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQDVTLG*MLGSFS
Trigger: GCTGAAACTGCCAAGCATCAAGCCAAGTGTAACATC...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCTTCTAACCCTGTGCTaGTGTCCTGGGGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWLLTLC*CPGEDS
Trigger: TGAGTCCTCCCCAGGACACAAGCACAGGGTTAGAAG...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTAGAATCTTTTCACTGTaGGTTTGCTGCAATCCAGCC +
Preference number: 5 (lower is better)
Translates to: PVPHKGERERESKTRTKFRIFSL*VCCNPA
Trigger: GGCTGGATTGCAGCAAACCAACAGTGAAAAGATTCT...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGGAAAGAACCCTTTGGTaGGCATCCTTCCCCTGGTTA +
Preference number: 5 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMERTLW*ASFPWL
Trigger: TAACCAGGGGAAGGATGCCAACCAAAGGGTTCTTTC...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCCGTTCATCAAGCTCTTaGGGATTTTCTGTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCRSSSS*GFSVCF
Trigger: AAAGCAGACAGAAAATCCCAAAGAGCTTGATGAACG...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCACCAAGGTTTCTTTCTaGCCCAACACCATTTTCAAA +
Preference number: 5 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTTKVSF*PNTIFK
Trigger: TTTGAAAATGGTGTTGGGCAAGAAAGAAACCTTGGT...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCGCTGCAAATCGACGGTaGAGCTCAGAGATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLAANRR*SSEIWG
Trigger: GCCCCAAATCTCTGAGCTCAACCGTCGATTTGCAGC...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTCCTGCCTGACTTGGTaGGTTATAAATTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCSCLTW*VINFQL
Trigger: CAGTTGGAAATTTATAACCAACCAAGTCAGGCAGGA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTCTTTGGCCAACTGCTaGGTTTCTGTGATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCSLANC*VSVIFF
Trigger: AAAGAAGATCACAGAAACCAAGCAGTTGGCCAAAGA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCGTTTTCAATTCCCTCTaGAAGGCCCTATGTATATCA +
Preference number: 5 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTVFNSL*KALCIS
Trigger: TGATATACATAGGGCCTTCAAGAGGGAATTGAAAAC...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTTGTCCCATTCAGCGTaGACCTCTTCAGCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMLSHSA*TSSACF
Trigger: AAAGCAGGCTGAAGAGGTCAACGCTGAATGGGACAA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTCAGCTTGGCGCAACTaGAGGTCCAGTTCATCGGCA +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWSAWRN*RSSSSA
Trigger: TGCCGATGAACTGGACCTCAAGTTGCGCCAAGCTGA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCAGGTCATTGACACGATaGACATTCTCTTTAAGAGGT +
Preference number: 5 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTRSLTR*TFSLRG
Trigger: ACCTCTTAAAGAGAATGTCAATCGTGTCAATGACCT...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGCGATCATATTCTGCTaGCAGATTCGTTTCCATGTT +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLAIIFC*QIRFHV
Trigger: AACATGGAAACGAATCTGCAAGCAGAATATGATCGC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS GCA 90 bp AGCTTTTGGCAGCTTTCCACCAACTGGGAGGAAAGTTTCTTCCAGTaGCCCTCAATCTCTTCAAATTCTGACAGATATTTCTGGCATATT +
Preference number: 5 (lower is better)
Translates to: SFWQLSTNWEESFFQ*PSISSNSDRYFWHI
Trigger: AATATGCCAGAAATATCTGTCAGAATTTGAAGAGATTGAGGGGCACTGGAAGAAACTTTCCTCCCAGTTGGTGGAAAGCTGCCAAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS GCA 90 bp ATGCCCAAACTTCTTCCAAAGTTTTGCATTTTCCATTCAGCCTGGTaGACAGCCATTGGTAGTTGGTGGTCAGAGTTTCAAGTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: MPKLLPKFCIFHSAW*TAIGSWWSEFQVPF
Trigger: AAAAGGAACTTGAAACTCTGACCACCAACTACCAATGGCTGTGCACCAGGCTGAATGGAAAATGCAAAACTTTGGAAGAAGTTTGGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS GCA 90 bp CTGATGTGCAAGGTCATTGACACGATTGACATTCTCTTTAAGAGGTaGAATTTCTCCCCGAAGTGCCTTGACTTTTTCAAGGTGATCTTG +
Preference number: 5 (lower is better)
Translates to: LMCKVIDTIDILFKR*NFSPKCLDFFKVIL
Trigger: CAAGATCACCTTGAAAAAGTCAAGGCACTTCGGGGAGAAATTGCACCTCTTAAAGAGAATGTCAATCGTGTCAATGACCTTGCACATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTCATTTTGCTTGAGGTaGTGCTGGTCCAGGGCATCA +
Preference number: 5 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKSFCLR*CWSRAS
Trigger: TGATGCCCTGGACCAGCACAACCTCAAGCAAAATGA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCAGATTGTTGTGCTCTaGCTCCAGACGATCATAAAT +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVQIVVL*LQTIIN
Trigger: ATTTATGATCGTCTGGAGCAAGAGCACAACAATCTG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGACATTGACCAGATTGTaGTGCTCTTGCTCCAGACGA +
Preference number: 5 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMTLTRL*CSCSRR
Trigger: TCGTCTGGAGCAAGAGCACAACAATCTGGTCAATGT...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATACATTGACCAGATTGTaGTGCTCTTGCTCCAGACGA +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNTLTRL*CSCSRR
Trigger: TCGTCTGGAGCAAGAGCACAACAATCTGGTCAATGT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCTTCCAGGCGTCCTTaGTGTTGGCGCAGTAGCTTA +
Preference number: 5 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVASRRP*CWRSSL
Trigger: TAAGCTACTGCGCCAACACAAAGGACGCCTGGAAGC...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGGACTCCAGCTGTTTATaGTGGTCTTCCAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMDSSCL*WSSRIC
Trigger: GCAAATCCTGGAAGACCACAATAAACAGCTGGAGTC...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCTAGGGAAGGAGTTGTaGAGTTGCTCCATCACTTCT +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNLGKEL*SCSITS
Trigger: AGAAGTGATGGAGCAACTCAACAACTCCTTCCCTAG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGAACTAGGGAAGGAGTaGTTGAGTTGCTCCATCACT +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNELGKE*LSCSIT
Trigger: AGTGATGGAGCAACTCAACAACTCCTTCCCTAGTTC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGGAACTAGGGAAGGAGTaGTTGAGTTGCTCCATCACT +
Preference number: 5 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMELGKE*LSCSIT
Trigger: AGTGATGGAGCAACTCAACAACTCCTTCCCTAGTTC...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTTTCAATGCTCACTTGTaGTGGCAAAACTTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLFNAHL*WQNLKE
Trigger: CTCTTTCAAGTTTTGCCACAACAAGTGAGCATTGAA...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTGGCTTCAATGCTCACTaGTTGTGGCAAAACTTGAAA +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVGFNAH*LWQNLK
Trigger: TTTCAAGTTTTGCCACAACAAGTGAGCATTGAAGCC...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTCCATCTGCAGATATTaGCCCATCGATCTCCCAGTA +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNSICRY*PIDLPV
Trigger: TACTGGGAGATCGATGGGCAAATATCTGCAGATGGA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACTGCATCCAGAAACATaGGCCCCTGTCCCTTTTCTT +
Preference number: 5 (lower is better)
Translates to: FSPGSMTCICLDISARQLLHPET*APVPFL
Trigger: AAGAAAAGGGACAGGGGCCAATGTTTCTGGATGCAG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTCTCCTGATAGCGCATaGGTGGTAAAGTGTCAAAAA +
Preference number: 5 (lower is better)
Translates to: PVPHKGERERESKTRTKFSPDSA*VVKCQK
Trigger: TTTTTGACACTTTACCACCAATGCGCTATCAGGAGA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTATTTCCACTTCAGACTaGACTTCACTCAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLISTSD*TSLRLL
Trigger: TAAAAGCCTGAGTGAAGTCAAGTCTGAAGTGGAAAT...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGGTTTGCCATCAATTTaGCTGCTTGGTCACGTGTGG +
Preference number: 5 (lower is better)
Translates to: FSPGSMTCICLDISARQLGLPSI*LLGHVW
Trigger: CCACACGTGACCAAGCAGCAAAATTGATGGCAAACC...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTGTTCTGACAACAGCTaGACGCTGCCCAATGCCATC +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWCSDNS*TLPNAI
Trigger: GATGGCATTGGGCAGCGTCAAGCTGTTGTCAGAACA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTCTTCTGCCAGTAACTaGACTTGTTCAAGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCSSASN*TCSSCS
Trigger: AGAACAACTTGAACAAGTCAAGTTACTGGCAGAAGA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCTCACTGGCTGAGTGCTaGGTTTTTCCTTATACAAAT +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCSLAEC*VFPYTN
Trigger: ATTTGTATAAGGAAAAACCAAGCACTCAGCCAGTGA...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CCAGTGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTTCTCTGTTCCAAATCTaGCAGTGTTGCCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: PVPHKGERERESKTRTKFSLFQI*QCCLLF
Trigger: AAACAGAAGGCAACACTGCAAGATTTGGAACAGAGA...AAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTGTTGCTCCCCTCATATAAATTGACTGAGGAGCCGCAACCTTTAGCTCCTACCCTTCCAGCCATTGTGTaGAATCCTTTAACATTTCAT +
Preference number: 5 (lower is better)
Translates to: LLLPSYKLTEEPQPLAPTLPAIV*NPLTFH
Trigger: ATGAAATGTTAAAGGATTCAACACAATGGCTGGAAG...GGTAGGAGCTAAAGGTTGCGGCTCCTCAGTCAATTTATATGAGGGGAGCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTACACTTATCTGCCGTaGACGGAGGTCTTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKYTYLP*TEVFGQ
Trigger: TTGGCCAAAGACCTCCGTCAACGGCAGATAAGTGTA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGAGCGCAGGTTCAATTaGTCCCATTCAGCGTTGACC +
Preference number: 5 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSERRFN*SHSALT
Trigger: GGTCAACGCTGAATGGGACAAATTGAACCTGCGCTC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp CTGCTGAATTTCAGCCTCCAGTGGTTCAAGCAATTTTTGTATATCTaGGTTAAACTGCTCCAATTCCTTCAAAGGAATGGAGGCCTTTCC +
Preference number: 5 (lower is better)
Translates to: LLNFSLQWFKQFLYI*VKLLQFLQRNGGLS
Trigger: GGAAAGGCCTCCATTCCTTTGAAGGAATTGGAGCAGTTTAACTCAGATATACAAAAATTGCTTGAACCACTGGAGGCTGAAATTCAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp GATCATTTCATTGATGTCTTCCAGATCACCCACCATCACTCTCTGTaGTTTTATAACTCGATCAAGCAGAGACAGCCAGTCTGTAAGTTC +
Preference number: 5 (lower is better)
Translates to: DHFIDVFQITHHHSL*FYNSIKQRQPVCKF
Trigger: GAACTTACAGACTGGCTGTCTCTGCTTGATCGAGTTATAAAATCACAGAGAGTGATGGTGGGTGATCTGGAAGACATCAATGAAATGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 90 bp TCTTCAGCTTGTGTCATCCACTCATGCATCTCTGATAGATCTTTTTaGAGGCTTACGGTTTTATCCAAACCTGCCTTTAAGGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: SSACVIHSCISDRSF*RLTVLSKPAFKASF
Trigger: AAAGGAAGCCTTAAAGGCAGGTTTGGATAAAACCGTAAGCCTCCAAAAAGATCTATCAGAGATGCATGAGTGGATGACACAAGCTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAACATTGACCAGATTGTaGTGCTCTTGCTCCAGACGA +
Preference number: 5 (lower is better)
Translates to: FSPGSMTCICLDISARQLTLTRL*CSCSRR
Trigger: TCGTCTGGAGCAAGAGCACAACAATCTGGTCAATGT...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGGGACATTGACCAGATaGTTGTGCTCTTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWGTLTR*LCSCSR
Trigger: TCTGGAGCAAGAGCACAACAATCTGGTCAATGTCCC...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTTTATTATTGGCAAATaGGAAGCAGCTCCTGACACT +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVFIIGK*EAAPDT
Trigger: AGTGTCAGGAGCTGCTTCCAATTTGCCAATAATAAA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGGCGATCATATTCTGCTaGCAGATTCCTGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQAIIFC*QIPVFF
Trigger: GAAGAAAACAGGAATCTGCAAGCAGAATATGATCGC...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGCTAGGGAAGGAGTTGTaGAGTTGCTCCATCACTTCT +
Preference number: 5 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKLGKEL*SCSITS
Trigger: AGAAGTGATGGAGCAACTCAACAACTCCTTCCCTAG...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CACAATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCGAGGTTGTCTATGTGTaGCTTTCCAAACTTAGAAAA +
Preference number: 5 (lower is better)
Translates to: HNPVWSYLQGNQCKGDKCEVVYV*LSKLRK
Trigger: TTTTCTAAGTTTGGAAAGCAACACATAGACAACCTC...GCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGAACTGTCAAGTGACTaGTCTCTGGGAGCTTCCAAA +
Preference number: 5 (lower is better)
Translates to: FSPGSMTCICLDISARQLELSSD*SLGASK
Trigger: TTTGGAAGCTCCCAGAGACAAGTCACTTGACAGTTC...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCTTCCAAAGCAGCTGTaGCATGATCACCGCTGGATT +
Preference number: 5 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLLPKQL*HDHRWI
Trigger: AATCCAGCGGTGATCATGCAACAGCTGCTTTGGAAG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTGGTGGAAGTTCCTCTaGGGCATGTTTTACCATGAT +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNWWKFL*GMFYHD
Trigger: ATCATGGTAAAACATGCCCAAGAGGAACTTCCACCA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGTCTCTCACTCAGCAATaGGCAGAATTCTGTCCACCG +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWSLTQQ*AEFCPP
Trigger: CGGTGGACAGAATTCTGCCAATTGCTGAGTGAGAGA...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp AGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCGGTAGTCTCCTGGCTTGTTGAAGCCATTTTGTaGCTCTTTCAAAGAACTTTG +
Preference number: 5 (lower is better)
Translates to: RNIWSPRQYFSVAVVSWLVEAIL*LFQRTL
Trigger: CAAAGTTCTTTGAAAGAGCAACAAAATGGCTTCAAC...AAGCCAGGAGACTACCGCCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGAAAGAACCCTTTGGTaGGCATCCTTCCCCTGGTTA +
Preference number: 5 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSERTLW*ASFPWL
Trigger: TAACCAGGGGAAGGATGCCAACCAAAGGGTTCTTTC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTGCAGGCAAATGCATCTaGACTTCATCTAAAATCATC +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVAGKCI*TSSKII
Trigger: GATGATTTTAGATGAAGTCAAGATGCATTTGCCTGC...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTCCTGTTCAACACTCTaGGTTTCCAATGCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNSCSTL*VSNAGK
Trigger: TTTGCCTGCATTGGAAACCAAGAGTGTTGAACAGGA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATTTTCTCAATCTCTTTTaGAGTAGCCTTTCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNFLNLF*SSLSPG
Trigger: GCCTGGGGAAAGGCTACTCAAAAAGAGATTGAGAAA...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGCATGGAGGTGGCACTTaGCAAGGCTGCTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVHGGGT*QGCCLL
Trigger: AAGAAGACAGCAGCCTTGCAAAGTGCCACCTCCATG...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTCTTCTGCCAGTAACTaGACTTGTTCAAGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVSSASN*TCSSCS
Trigger: AGAACAACTTGAACAAGTCAAGTTACTGGCAGAAGA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTTTGATGATCATTTCATaGATGTCTTCCAGATCACCC +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVLMIIS*MSSRSP
Trigger: GGGTGATCTGGAAGACATCAATGAAATGATCATCAA...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGTCTCTGTTCCAAATCTaGCAGTGTTGCCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQSLFQI*QCCLLF
Trigger: AAACAGAAGGCAACACTGCAAGATTTGGAACAGAGA...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTTCCATGAGTCAAGCTaGCCTCTGACCTGTCCTATG +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDFHESS*PLTCPM
Trigger: CATAGGACAGGTCAGAGGCAAGCTTGACTCATGGAA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCACGGGAGTTTCCATGTaGTCCCCCTCTAACACAGTC +
Preference number: 5 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFTGVSM*SPSNTV
Trigger: GACTGTGTTAGAGGGGGACAACATGGAAACTCCCGT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGTCTACTGGCCAGAAGTaGATCAGAGTAACGGGAGTT +
Preference number: 5 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKSTGQK*IRVTGV
Trigger: AACTCCCGTTACTCTGATCAACTTCTGGCCAGTAGA...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp TTCATATTCAGTAACACTAAGATAAGGTACAGAGAGTTTGCTTTCTaGCTGCTGGATCCACGTCCTGATGCTACTCATTGTCTCCTGATA +
Preference number: 5 (lower is better)
Translates to: FIFSNTKIRYREFAF*LLDPRPDATHCLLI
Trigger: TATCAGGAGACAATGAGTAGCATCAGGACGTGGATCCAGCAGTCAGAAAGCAAACTCTCTGTACCTTATCTTAGTGTTACTGAATATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCTCATTTTGCTTGAGGTaGTGCTGGTCCAGGGCATCA +
Preference number: 5 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFSFCLR*CWSRAS
Trigger: TGATGCCCTGGACCAGCACAACCTCAAGCAAAATGA...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGAACTTGCCACTTGCTaGAAAAGGTATCTGTACTTG +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNELATC*KRYLYL
Trigger: CAAGTACAGATACCTTTTCAAGCAAGTGGCAAGTTC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGATGTTACACTTGGCTaGATGCTTGGCAGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWDVTLG*MLGSFS
Trigger: GCTGAAACTGCCAAGCATCAAGCCAAGTGTAACATC...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGATGTTACACTTGGCTaGATGCTTGGCAGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSDVTLG*MLGSFS
Trigger: GCTGAAACTGCCAAGCATCAAGCCAAGTGTAACATC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGACTCCAGCTGTTTATaGTGGTCTTCCAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSDSSCL*WSSRIC
Trigger: GCAAATCCTGGAAGACCACAATAAACAGCTGGAGTC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACCTAGGGAAGGAGTTGTaGAGTTGCTCCATCACTTCT +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDLGKEL*SCSITS
Trigger: AGAAGTGATGGAGCAACTCAACAACTCCTTCCCTAG...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATGTTTTCATCACATTTTaGACCTGCCAGTGGAGGATT +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNVFITF*TCQWRI
Trigger: AATCCTCCACTGGCAGGTCAAAAATGTGATGAAAAC...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGACTGACTGTGATCTGTaGAGAGTAATGCATCTGGTG +
Preference number: 5 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKTDCDL*RVMHLV
Trigger: CACCAGATGCATTACTCTCAACAGATCACAGTCAGT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTGTAGCTCTTTCTCTTaGGCCCTCACACCATCAAAG +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDCSSFS*ALTPSK
Trigger: CTTTGATGGTGTGAGGGCCAAAGAGAAAGAGCTACA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGACTTCTTCCAAAGTTTaGCATTTTCCATTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQTSSKV*HFPFSL
Trigger: CAGGCTGAATGGAAAATGCAAAACTTTGGAAGAAGT...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp ATCCTGTGTGGAGTTACTTGCAGGGAAACCAATGCAAAGGAGACAAATGCAGTTCTTTTTCTGTACAATTaGACGTCCGGTTTTAATCAC +
Preference number: 5 (lower is better)
Translates to: ILCGVTCRETNAKETNAVLFLYN*TSGFNH
Trigger: GTGATTAAAACCGGACGTCAAATTGTACAGAAAAAG...AACTGCATTTGTCTCCTTTGCATTGGTTTCCCTGCAAGTAACTCCACACAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCGTGTGGAGTCCACCTTaGGGCGCATGTCATTCATTT +
Preference number: 5 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFVWSPP*GACHSF
Trigger: AAATGAATGACATGCGCCCAAAGGTGGACTCCACAC...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATATGGAGAGTGTGAATTaGTGCAAAGTTGAGTCTTCG +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNMESVN*CKVESS
Trigger: CGAAGACTCAACTTTGCACAAATTCACACTCTCCAT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAACGGTCCTGCCTGACTaGGTTGGTTATAAATTTCCA +
Preference number: 5 (lower is better)
Translates to: FSPGSMTCICLDISARQLTVLPD*VGYKFP
Trigger: TGGAAATTTATAACCAACCAAGTCAGGCAGGACCGT...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGTTGATGATCATTTCATaGATGTCTTCCAGATCACCC +
Preference number: 5 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQLMIIS*MSSRSP
Trigger: GGGTGATCTGGAAGACATCAATGAAATGATCATCAA...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCAATGAGTTCTTCCAATaGGGGGCGTCTCTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLNEFFQ*GASLFQ
Trigger: TTGGAACAGAGACGCCCCCAATTGGAAGAACTCATT...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGTTCTGTGATCTTCTTTaGGATTGCATCTACTGTGTG +
Preference number: 5 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQFCDLL*DCIYCV
Trigger: CACACAGTAGATGCAATCCAAAAGAAGATCACAGAA...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGTACACTTATCTGCCGTaGACGGAGGTCTTTGGCCAA +
Preference number: 5 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVYTYLP*TEVFGQ
Trigger: TTGGCCAAAGACCTCCGTCAACGGCAGATAAGTGTA...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp CTCATATCTTTATTGAAGTCTTCCTCTTTCAGATTCACCCCCTGCTaGATTTCAGCCTCCAGTGGTTCAAGCAATTTTTGTATATCTGAG +
Preference number: 5 (lower is better)
Translates to: LISLLKSSSFRFTPC*ISASSGSSNFCISE
Trigger: CTCAGATATACAAAAATTGCTTGAACCACTGGAGGCTGAAATTCAGCAGGGGGTGAATCTGAAAGAGGAAGACTTCAATAAAGATATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp TTTTCCATGGAGGTGGCACTTTGCAAGGCTGCTGTCTTCTTCTTGTaGATAATATCAATCCGACCTGAGATTTGTTGCAAATTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: FSMEVALCKAAVFFL*IISIRPEICCKLSF
Trigger: AAAAGACAATTTGCAACAAATCTCAGGTCGGATTGATATTATTCACAAGAAGAAGACAGCAGCCTTGCAAAGTGCCACCTCCATGGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp TCAGCCTCCAGTGGTTCAAGCAATTTTTGTATATCTGAGTTAAACTaGTCCAATTCCTTCAAAGGAATGGAGGCCTTTCCAGTCTTAATT +
Preference number: 5 (lower is better)
Translates to: SASSGSSNFCISELN*SNSFKGMEAFPVLI
Trigger: AATTAAGACTGGAAAGGCCTCCATTCCTTTGAAGGAATTGGAGCAGTTTAACTCAGATATACAAAAATTGCTTGAACCACTGGAGGCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAGAACTTGCCACTTGCTaGAAAAGGTATCTGTACTTG +
Preference number: 5 (lower is better)
Translates to: FSPGSMTCICLDISARQLELATC*KRYLYL
Trigger: CAAGTACAGATACCTTTTCAAGCAAGTGGCAAGTTC...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATCAACTGTCTTGGGATTaGAATAGAATCATGCAGAAG +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNQLSWD*NRIMQK
Trigger: CTTCTGCATGATTCTATTCAAATCCCAAGACAGTTG...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGATGTTACACTTGGCTaGATGCTTGGCAGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVDVTLG*MLGSFS
Trigger: GCTGAAACTGCCAAGCATCAAGCCAAGTGTAACATC...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGACTCCAGCTGTTTATaGTGGTCTTCCAGGATTTGC +
Preference number: 5 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVDSSCL*WSSRIC
Trigger: GCAAATCCTGGAAGACCACAATAAACAGCTGGAGTC...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCTAGGGAAGGAGTTGTaGAGTTGCTCCATCACTTCT +
Preference number: 5 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFLGKEL*SCSITS
Trigger: AGAAGTGATGGAGCAACTCAACAACTCCTTCCCTAG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGGAGATTCATTTGTTCTaGCACTTCAGCTTCTTCATC +
Preference number: 5 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMEIHLF*HFSFFI
Trigger: GATGAAGAAGCTGAAGTGCAAGAACAAATGAATCTC...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGTCTCAAGCTCCTCATaGATCAGTTCATCCATGACT +
Preference number: 5 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSVSSSS*ISSSMT
Trigger: AGTCATGGATGAACTGATCAATGAGGAGCTTGAGAC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TGCCACATAAAGGAGAGAGAGAGAGAGAAAGCAAGACCAGAACCAAATTTCAATATTTCCACTTCAGACTaGACTTCACTCAGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: CHIKEREREKARPEPNFNISTSD*TSLRLL
Trigger: TAAAAGCCTGAGTGAAGTCAAGTCTGAAGTGGAAAT...ATTGAAATTTGGTTCTGGTCTTGCTTTCTCTCTCTCTCTCTCCTTTATGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGCTTTTTCTGTACAATTaGACGTCCGGTTTTAATCAC +
Preference number: 5 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQLFLYN*TSGFNH
Trigger: GTGATTAAAACCGGACGTCAAATTGTACAGAAAAAG...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTAATGGAGAGTGTGAATTaGTGCAAAGTTGAGTCTTCG +
Preference number: 5 (lower is better)
Translates to: FSPGSMTCICLDISARQLMESVN*CKVESS
Trigger: CGAAGACTCAACTTTGCACAAATTCACACTCTCCAT...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACTTTTCAAGTTTATCTaGCTCTTCTGGCCTTATGGG +
Preference number: 5 (lower is better)
Translates to: FSPGSMTCICLDISARQLLFKFI*LFWPYG
Trigger: CCCATAAGGCCAGAAGAGCAAGATAAACTTGAAAAG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCCTTTCCACATCCGCTaGTTTACCGTGAACTGTTAC +
Preference number: 5 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFPFHIR*FTVNCY
Trigger: GTAACAGTTCACGGTAAACAAGCGGATGTGGAAAGG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CAGCATATGCATCAAGTACATATACTCGTGCTGGGTTTTGTTTTCTTGGGACAGAGTGTTGCCTTCTGTTaGATGATCATTTCATTGATG +
Preference number: 5 (lower is better)
Translates to: QHMHQVHILVLGFVFLGQSVAFC*MIISLM
Trigger: CATCAATGAAATGATCATCAAACAGAAGGCAACACT...CTGTCCCAAGAAAACAAAACCCAGCACGAGTATATGTACTTGATGCATATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp GTAGAACATTACCAACAAGTCCTTGATGAGATGTCAGATCCATCATaGATCCCTCATGAGCATGAAACTGTTCTTTCACTTCTTCAACAT +
Preference number: 5 (lower is better)
Translates to: VEHYQQVLDEMSDPS*IPHEHETVLSLLQH
Trigger: ATGTTGAAGAAGTGAAAGAACAGTTTCATGCTCATGAGGGATTCATGATGGATCTGACATCTCATCAAGGACTTGTTGGTAATGTTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 90 bp CTTCCTGTTCAACACTCTTGGTTTCCAATGCAGGCAAATGCATCTTaGCTTCATCTAAAATCATCTTACTTTCCTCTAGACGTTGTTCAA +
Preference number: 5 (lower is better)
Translates to: LPVQHSWFPMQANAS*LHLKSSYFPLDVVQ
Trigger: TTGAACAACGTCTAGAGGAAAGTAAGATGATTTTAGATGAAGTCAAGATGCATTTGCCTGCATTGGAAACCAAGAGTGTTGAACAGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 90 bp TCTGGTATTCCAACAAAAGATTTAGCCATTCTTCTACTCTGGAGGTaGCAGCTATCCAGTTACTGTTCAGAAGACTCAGTTTATCTTCTA +
Preference number: 5 (lower is better)
Translates to: SGIPTKDLAILLLWR*QLSSYCSEDSVYLL
Trigger: TAGAAGATAAACTGAGTCTTCTGAACAGTAACTGGATAGCTGTCACCTCCAGAGTAGAAGAATGGCTAAATCTTTTGTTGGAATACCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp TTCAGTCGTCACTACCATAGTTTCTTCATGGAGAGTGTGAATTTGTaGAAAGTTGAGTCTTCGAAACTGAGCAAAATTGCTCTCAATTTG +
Preference number: 5 (lower is better)
Translates to: FSRHYHSFFMESVNL*KVESSKLSKIALNL
Trigger: CAAATTGAGAGCAATTTTGCTCAGTTTCGAAGACTCAACTTTGCACAAATTCACACTCTCCATGAAGAAACTATGGTAGTGACGACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGCAGATTGTTGTGCTCTaGCTCCAGACGATCATAAAT +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWQIVVL*LQTIIN
Trigger: ATTTATGATCGTCTGGAGCAAGAGCACAACAATCTG...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGCCCGTCAACTACAACTGTCTTGGGATTaGAATAGAATCATGCAGAAG +
Preference number: 5 (lower is better)
Translates to: FSPGSMTCICLDISARQLQLSWD*NRIMQK
Trigger: CTTCTGCATGATTCTATTCAAATCCCAAGACAGTTG...TAGTTGACGGGCTGAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGGCGATCATATTCTGCTaGCAGATTCCTGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWAIIFC*QIPVFF
Trigger: GAAGAAAACAGGAATCTGCAAGCAGAATATGATCGC...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCGCGATCATATTCTGCTaGCAGATTCCTGTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLAIIFC*QIPVFF
Trigger: GAAGAAAACAGGAATCTGCAAGCAGAATATGATCGC...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGCTTTTCACTGTTGGTTaGCTGCAATCCAGCCATGAT +
Preference number: 5 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVLFTVG*LQSSHD
Trigger: ATCATGGCTGGATTGCAGCAAACCAACAGTGAAAAG...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TATGATACTCAAGTAAGAGTCCAGTACCTGGAGACAATGATGATACATGCCATGTTCAATTCTACTTCATaGAGCCACTTGTTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: YDTQVRVQYLETMMIHAMFNSTS*SHLFAF
Trigger: GAAAGCAAACAAGTGGCTCAATGAAGTAGAATTGAA...CATGGCATGTATCATCATTGTCTCCAGGTACTGGACTCTTACTTGAGTATCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCACGTTCATCAAGCTCTTaGGGATTTTCTGTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSRSSSS*GFSVCF
Trigger: AAAGCAGACAGAAAATCCCAAAGAGCTTGATGAACG...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCCTTTTCAAGTTTATCTaGCTCTTCTGGCCTTATGGG +
Preference number: 5 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLLFKFI*LFWPYG
Trigger: CCCATAAGGCCAGAAGAGCAAGATAAACTTGAAAAG...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTCCTGCCTGACTTGGTaGGTTATAAATTTCCAACTG +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDSCLTW*VINFQL
Trigger: CAGTTGGAAATTTATAACCAACCAAGTCAGGCAGGA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGACGGTCCTGCCTGACTaGGTTGGTTATAAATTTCCA +
Preference number: 5 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVTVLPD*VGYKFP
Trigger: TGGAAATTTATAACCAACCAAGTCAGGCAGGACCGT...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCATTCCAAAGCAGCCTCTaGCTCACTTACTCTTTTATG +
Preference number: 5 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSFQSSL*LTYSFM
Trigger: CATAAAAGAGTAAGTGAGCAAGAGGCTGCTTTGGAA...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTTCCAAAGCAGCCTCTaGCTCACTTACTCTTTTATG +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDFQSSL*LTYSFM
Trigger: CATAAAAGAGTAAGTGAGCAAGAGGCTGCTTTGGAA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp CGCTTTCTCTCATCTGTGATTCTTTGTTGTAAGTTGTCTCCTCTTTaGAACAATTCATTTACAGTACCCTCATTGTCTTCACTCATATCT +
Preference number: 5 (lower is better)
Translates to: RFLSSVILCCKLSPL*NNSFTVPSLSSLIS
Trigger: AGATATGAGTGAAGACAATGAGGGTACTGTAAATGAATTGTTGCAAAGAGGAGACAACTTACAACAAAGAATCACAGATGAGAGAAAGCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTTTATTATTGGCAAATaGGAAGCAGCTCCTGACACT +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDFIIGK*EAAPDT
Trigger: AGTGTCAGGAGCTGCTTCCAATTTGCCAATAATAAA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACAGTTTTTGGGTTAAATaGTCCCAACGTTGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDSFWVK*SQRCAK
Trigger: CTTTGCACAACGTTGGGACAATTTAACCCAAAAACT...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp CAACAACAACAACAACAACAACAAAACCACCCACTTCAGGTTGAGTTTATGAAGAGAGCTGACAATCTGTaGACTTCATCCTTACAAATT +
Preference number: 5 (lower is better)
Translates to: QQQQQQQQNHPLQVEFMKRADNL*TSSLQI
Trigger: AATTTGTAAGGATGAAGTCAACAGATTGTCAGCTCT...CTTCATAAACTCAACCTGAAGTGGGTGGTTTTGTTGTTGTTGTTGTTGTTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGATATTCTTCTTCAGCTaGTGTCATCCACTCATGCAT +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWIFFFS*CHPLMH
Trigger: ATGCATGAGTGGATGACACAAGCTGAAGAAGAATAT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCAGAATCCAAATTACTaGGCATTCCTTCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFQNPNY*AFLQLL
Trigger: CAGCAGTTGAAGGAATGCCAAGTAATTTGGATTCTG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AGTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGCAGAATCCAAATTACTaGGCATTCCTTCAACTGCTG +
Preference number: 5 (lower is better)
Translates to: SGKFKTRNIWSPRQYFSVQNPNY*AFLQLL
Trigger: CAGCAGTTGAAGGAATGCCAAGTAATTTGGATTCTG...CACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp GTGGAAAGTTTAAAACTAGAAACATCTGGAGCCCTAGACAATATTTTAGTGTGGACCAAGGTTTCTTTCTaGCCCAACACCATTTTCAAA +
Preference number: 5 (lower is better)
Translates to: VESLKLETSGALDNILVWTKVSF*PNTIFK
Trigger: TTTGAAAATGGTGTTGGGCAAGAAAGAAACCTTGGT...CCACACTAAAATATTGTCTAGGGCTCCAGATGTTTCTAGTTTTAAACTTTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTCACTGGCTGAGTGCTaGGTTTTTCCTTATACAAAT +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDSLAEC*VFPYTN
Trigger: ATTTGTATAAGGAAAAACCAAGCACTCAGCCAGTGA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCATTCTGTGATCTTCTTTaGGATTGCATCTACTGTGTG +
Preference number: 5 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSFCDLL*DCIYCV
Trigger: CACACAGTAGATGCAATCCAAAAGAAGATCACAGAA...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp CATGCATACATATCATTGTGCCTTGCTCAAATTCCTTCTCACTATGATCATTCAGTTTTCAATTCCCTCTaGAAGGCCCTATGTATATCA +
Preference number: 5 (lower is better)
Translates to: HAYISLCLAQIPSHYDHSVFNSL*KALCIS
Trigger: TGATATACATAGGGCCTTCAAGAGGGAATTGAAAAC...TGAATGATCATAGTGAGAAGGAATTTGAGCAAGGCACAATGATATGTATGCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACAGGTCATTGACACGATaGACATTCTCTTTAAGAGGT +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDRSLTR*TFSLRG
Trigger: ACCTCTTAAAGAGAATGTCAATCGTGTCAATGACCT...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 90 bp TCATTGAGCCACTTGTTTGCTTTCTCTAAATATGACAATAACTCATaGCAACATGCCCAAACTTCTTCCAAAGTTTTGCATTTTCCATTC +
Preference number: 5 (lower is better)
Translates to: SLSHLFAFSKYDNNS*QHAQTSSKVLHFPF
Trigger: GAATGGAAAATGCAAAACTTTGGAAGAAGTTTGGGCATGTTGGCATGAGTTATTGTCATATTTAGAGAAAGCAAACAAGTGGCTCAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCCAACTGTCTTGGGATTaGAATAGAATCATGCAGAAG +
Preference number: 5 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFQLSWD*NRIMQK
Trigger: CTTCTGCATGATTCTATTCAAATCCCAAGACAGTTG...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCATGTTTTACCATGATTaGTTCCCTTGTGGTCACCAT +
Preference number: 5 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFMFYHD*FPCGHH
Trigger: ATGGTGACCACAAGGGAACAAATCATGGTAAAACAT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS-3UTR CAA 90 bp TTAGCTTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACTCCTTAAGATACCATTaGTATTTAGCATGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: LAFCCTFSPGSMTCICLDSLRYH*YLACSQ
Trigger: CTGGGAACATGCTAAATACAAATGGTATCTTAAGGA...GTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAAGCTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp AATAATGGCTTTCATTATGACACTGTCATGCATACATATCATTGTGCCTTGCTCTCCTTAAGATACCATTaGTATTTAGCATGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: NNGFHYDTVMHTYHCALLSLRYH*YLACSQ
Trigger: CTGGGAACATGCTAAATACAAATGGTATCTTAAGGA...GAGCAAGGCACAATGATATGTATGCATGACAGTGTCATAATGAAAGCCATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS-3UTR CAA 90 bp TTTCTGTTGCACTTTTTCTCCTGGTTCAATGACTTGCATTTGTTTAGACATTTCAGTGTTGCCTTCTGTTaGATGATCATTTCATTGATG +
Preference number: 5 (lower is better)
Translates to: FLLHFFSWFNDLHLFRHFSVAFC*MIISLM
Trigger: CATCAATGAAATGATCATCAAACAGAAGGCAACACT...GAAATGTCTAAACAAATGCAAGTCATTGAACCAGGAGAAAAAGTGCAACAGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp CCAGCGCTTGCTGAGCTGGATCTGAGTTGGCTCCACTaGCATTGCGGCCCCATTCTCAGACAAGCCCTCAGC +
Preference number: 6 (lower is better)
Translates to: PALAELDLSWLH*HCGPILRQALS
Trigger: GCTGAGGGCTTGTCTGAGAATGGGGCCGCAATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAAGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp CCCACTGGCTGCCAGGATCCCTTGATCACCTCAGCTTaGCGCAACTTGAGGTCCAGTTCATCGGCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: PTGCQDPLITSA*RNLRSSSSAAS
Trigger: GGAAGCTGCCGATGAACTGGACCTCAAGTTGCGCCAAGCTGAGGTGATCAAGGGATCCTGGCAGCCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp CCCCACTGGCTGCCAGGATCCCTTGATCACCTCAGCTaGGCGCAACTTGAGGTCCAGTTCATCGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: PHWLPGSLDHLS*AQLEVQFIGSF
Trigger: GAAGCTGCCGATGAACTGGACCTCAAGTTGCGCCAAGCTGAGGTGATCAAGGGATCCTGGCAGCCAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp CTCTCAATTTGCCGCCAGCGCTTGCTGAGCTGGATCTaGGTTGGCTCCACTGCCATTGCGGCCCCATTCTCA +
Preference number: 6 (lower is better)
Translates to: LSICRQRLLSWI*VGSTAIAAPFS
Trigger: TGAGAATGGGGCCGCAATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGCAAATTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp TCTTGCAGAGAGTCAATGAGGAGATCCCCCACTGGCTaGCAGGATCCCTTGATCACCTCAGCTTGGCGCAAC +
Preference number: 6 (lower is better)
Translates to: SCRESMRRSPTG*QDPLITSAWRN
Trigger: GTTGCGCCAAGCTGAGGTGATCAAGGGATCCTGGCAGCCAGTGGGGGATCTCCTCATTGACTCTCTGCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp AATTTGCCGCCAGCGCTTGCTGAGCTGGATCTGAGTTaGCTCCACTGCCATTGCGGCCCCATTCTCAGACAA +
Preference number: 6 (lower is better)
Translates to: NLPPALAELDLS*LHCHCGPILRQ
Trigger: TTGTCTGAGAATGGGGCCGCAATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGCAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp GCAGTGGTCACCGCGGTTTGCCATCAATTTTGCTGCTaGGTCACGTGTGGAGTCCACCTTTGGGCGCATGTC +
Preference number: 6 (lower is better)
Translates to: AVVTAVCHQFCC*VTCGVHLWAHV
Trigger: GACATGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp TGGCTCCACTGCCATTGCGGCCCCATTCTCAGACAAGCCCTCAGCTaGCCTGCGCACTGCATTCAGCTCCTCTTTCTTCTTCTGCAATTC +
Preference number: 6 (lower is better)
Translates to: WLHCHCGPILRQALS*PAHCIQLLFLLLQF
Trigger: GAATTGCAGAAGAAGAAAGAGGAGCTGAATGCAGTGCGCAGGCAAGCTGAGGGCTTGTCTGAGAATGGGGCCGCAATGGCAGTGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp CTTGAGGTTGTGCTGGTCCAGGGCATCACATGCAGCTaGCAGGCTCAAGAGATCCAAGCAAAGGGCCTTCTG +
Preference number: 6 (lower is better)
Translates to: LEVVLVQGITCS*QAQEIQAKGLL
Trigger: CAGAAGGCCCTTTGCTTGGATCTCTTGAGCCTGTCAGCTGCATGTGATGCCCTGGACCAGCACAACCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS TCA 72 bp GAGCAAAATTGCTCTCAATTTGCCGCCAGCGCTTGCTaGGCTGGATCTGAGTTGGCTCCACTGCCATTGCGG +
Preference number: 6 (lower is better)
Translates to: EQNCSQFAASAC*AGSELAPLPLR
Trigger: CCGCAATGGCAGTGGAGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGCAAATTGAGAGCAATTTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp TTTCCTGCAGTGGTCACCGCGGTTTGCCATCAATTTTaGTGCTTGGTCACGTGTGGAGTCCACCTTTGGGCG +
Preference number: 6 (lower is better)
Translates to: FPAVVTAVCHQF*CLVTCGVHLWA
Trigger: CGCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp GCTGACAGGCTCAAGAGATCCAAGCAAAGGGCCTTCTaGAGCCTTCTGAGCTTCATGGCAGTCCTATACGCG +
Preference number: 6 (lower is better)
Translates to: ADRLKRSKQRAF*SLLSFMAVLYA
Trigger: CGCGTATAGGACTGCCATGAAGCTCAGAAGGCTCCAGAAGGCCCTTTGCTTGGATCTCTTGAGCCTGTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CCA 72 bp CAGTGGTCACCGCGGTTTGCCATCAATTTTGCTGCTTaGTCACGTGTGGAGTCCACCTTTGGGCGCATGTCA +
Preference number: 6 (lower is better)
Translates to: QWSPRFAINFAA*SRVESTFGRMS
Trigger: TGACATGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp CTTTCCTGCAGTGGTCACCGCGGTTTGCCATCAATTTaGCTGCTTGGTCACGTGTGGAGTCCACCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: LSCSGHRGLPSI*LLGHVWSPPLG
Trigger: GCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp TGCCATTGCGGCCCCATTCTCAGACAAGCCCTCAGCTaGCCTGCGCACTGCATTCAGCTCCTCTTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: CHCGPILRQALS*PAHCIQLLFLL
Trigger: AAGAAGAAAGAGGAGCTGAATGCAGTGCGCAGGCAAGCTGAGGGCTTGTCTGAGAATGGGGCCGCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp GGGCTCTACTACTTTCCTGCAGTGGTCACCGCGGTTTaGCATCAATTTTGCTGCTTGGTCACGTGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: GLYYFPAVVTAV*HQFCCLVTCGV
Trigger: GACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp TCTTCCAGGATTTGCATCCTGGCTTCCAGGCGTCCTTaGTGTTGGCGCAGTAGCTTAGCCTCAGCAATGAGC +
Preference number: 6 (lower is better)
Translates to: SSRICILASRRP*CWRSSLASAMS
Trigger: GCTCATTGCTGAGGCTAAGCTACTGCGCCAACACAAAGGACGCCTGGAAGCCAGGATGCAAATCCTGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CAA 72 bp GGGGCTCTACTACTTTCCTGCAGTGGTCACCGCGGTTaGCCATCAATTTTGCTGCTTGGTCACGTGTGGAGT +
Preference number: 6 (lower is better)
Translates to: GALLLSCSGHRG*PSILLLGHVWS
Trigger: ACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp TCAGCTGAGCGCAGGTTCAATTTGTCCCATTCAGCGTaGACCTCTTCAGCCTGCTTTCGTAGGAGCCGAGTG +
Preference number: 6 (lower is better)
Translates to: SAERRFNLSHSA*TSSACFRRSRV
Trigger: CACTCGGCTCCTACGAAAGCAGGCTGAAGAGGTCAACGCTGAATGGGACAAATTGAACCTGCGCTCAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp GCTCTACTACTTTCCTGCAGTGGTCACCGCGGTTTGCCATCAATTTaGCTGCTTGGTCACGTGTGGAGTCCACCTTTGGGCGCATGTCAT +
Preference number: 6 (lower is better)
Translates to: ALLLSCSGHRGLPSI*LLGHVWSPPLGACH
Trigger: ATGACATGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp GGAGGAGATGGCAGTGGAGACAGGCCTTTATGCTCATaGTGCTGCTTCAGGCGATCATATTCTGCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: GGDGSGDRPLCS*CCFRRSYSACR
Trigger: TCTGCAAGCAGAATATGATCGCCTGAAGCAGCAGCATGAGCATAAAGGCCTGTCTCCACTGCCATCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CCA 72 bp ATATCCATGGGCTGGTCATTTTGCTTGAGGTTGTGCTaGTCCAGGGCATCACATGCAGCTGACAGGCTCAAG +
Preference number: 6 (lower is better)
Translates to: ISMGWSFCLRLC*SRASHAADRLK
Trigger: CTTGAGCCTGTCAGCTGCATGTGATGCCCTGGACCAGCACAACCTCAAGCAAAATGACCAGCCCATGGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CCA 72 bp GAAATAGCTGCAAATCGACGGTTGAGCTCAGAGATTTaGGGCTCTACTACTTTCCTGCAGTGGTCACCGCGG +
Preference number: 6 (lower is better)
Translates to: EIAANRRLSSEI*GSTTFLQWSPR
Trigger: CCGCGGTGACCACTGCAGGAAAGTAGTAGAGCCCCAAATCTCTGAGCTCAACCGTCGATTTGCAGCTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp CGGTCAGGCTGCTTTGTCCTCAGCTCCCGAAGTAAATaGTTTACAGCCTCCCACTCAGACCTCAGATCTTCT +
Preference number: 6 (lower is better)
Translates to: RSGCFVLSSRSK*FTASHSDLRSS
Trigger: AGAAGATCTGAGGTCTGAGTGGGAGGCTGTAAACCATTTACTTCGGGAGCTGAGGACAAAGCAGCCTGACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp GAAGGCCCTATGTATATCATTCTGCTTCTGAACTGCTaGGAAATCACCACCGATGGGTGCCTGACGGCTCAG +
Preference number: 6 (lower is better)
Translates to: EGPMYIILLLNC*EITTDGCLTAQ
Trigger: CTGAGCCGTCAGGCACCCATCGGTGGTGATTTCCCAGCAGTTCAGAAGCAGAATGATATACATAGGGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp TTATTGTGGTCTTCCAGGATTTGCATCCTGGCTTCCAGGCGTCCTTaGTGTTGGCGCAGTAGCTTAGCCTCAGCAATGAGCTCAGCATCC +
Preference number: 6 (lower is better)
Translates to: LLWSSRICILASRRP*CWRSSLASAMSSAS
Trigger: GGATGCTGAGCTCATTGCTGAGGCTAAGCTACTGCGCCAACACAAAGGACGCCTGGAAGCCAGGATGCAAATCCTGGAAGACCACAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CAA 90 bp CAGAGATTTGGGGCTCTACTACTTTCCTGCAGTGGTCACCGCGGTTaGCCATCAATTTTGCTGCTTGGTCACGTGTGGAGTCCACCTTTG +
Preference number: 6 (lower is better)
Translates to: QRFGALLLSCSGHRG*PSILLLGHVWSPPL
Trigger: CAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAGCCCCAAATCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp GGCTTTCCGGGGGCATTTCTTCCTCTTGAACTAGGGAAGGAGTTGTaGAGTTGCTCCATCACTTCTTCTAACCCTGTGCTTGTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GFPGAFLPLELGKEL*SCSITSSNPVLVSW
Trigger: CCAGGACACAAGCACAGGGTTAGAAGAAGTGATGGAGCAACTCAACAACTCCTTCCCTAGTTCAAGAGGAAGAAATGCCCCCGGAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp TACTTTCCTGCAGTGGTCACCGCGGTTTGCCATCAATTTTGCTGCTaGGTCACGTGTGGAGTCCACCTTTGGGCGCATGTCATTCATTTC +
Preference number: 6 (lower is better)
Translates to: YFPAVVTAVCHQFCC*VTCGVHLWAHVIHF
Trigger: GAAATGAATGACATGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp CTCCTTGGAGATCTTGCCATGGTTTCATCAGCTCTCTaGCTCCCCTGGAGTCTTCTAGGAGCTTCTCCTTAC +
Preference number: 6 (lower is better)
Translates to: LLGDLAMVSSAL*LPWSLLGASPY
Trigger: GTAAGGAGAAGCTCCTAGAAGACTCCAGGGGAGTCAGAGAGCTGATGAAACCATGGCAAGATCTCCAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp TGGGGTGGTCCCAACAAGTGGTTTGGGTCTCGTGGTTaGTATAGTAGGGCACTTTGTTTGGTGAGATGGCTC +
Preference number: 6 (lower is better)
Translates to: WGGPNKWFGSRG*YSRALCLVRWL
Trigger: GAGCCATCTCACCAAACAAAGTGCCCTACTATATCAACCACGAGACCCAAACCACTTGTTGGGACCACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp GATGGCAGTGGAGACAGGCCTTTATGCTCATGCTGCTaGTTCAGGCGATCATATTCTGCTTGCAGATTCCTG +
Preference number: 6 (lower is better)
Translates to: DGSGDRPLCSCC*FRRSYSACRFL
Trigger: CAGGAATCTGCAAGCAGAATATGATCGCCTGAAGCAGCAGCATGAGCATAAAGGCCTGTCTCCACTGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp GGAGATGGCAGTGGAGACAGGCCTTTATGCTCATGCTaGTGCTTCAGGCGATCATATTCTGCTTGCAGATTC +
Preference number: 6 (lower is better)
Translates to: GDGSGDRPLCSC*CFRRSYSACRF
Trigger: GAATCTGCAAGCAGAATATGATCGCCTGAAGCAGCAGCATGAGCATAAAGGCCTGTCTCCACTGCCATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS GCA 72 bp CCAGTCTGTAAGTTCTGTCCAAGCTCGGTTGAAGTCTaGCAGTGCAGGTACCTCCAACAGCAAAGAAGATGG +
Preference number: 6 (lower is better)
Translates to: PVCKFCPSSVEV*QCRYLQQQRRW
Trigger: CCATCTTCTTTGCTGTTGGAGGTACCTGCACTGGCAGACTTCAACCGAGCTTGGACAGAACTTACAGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp CGCGGTTTGCCATCAATTTTGCTGCTTGGTCACGTGTaGAGTCCACCTTTGGGCGCATGTCATTCATTTCAG +
Preference number: 6 (lower is better)
Translates to: RGLPSILLLGHV*SPPLGACHSFQ
Trigger: CTGAAATGAATGACATGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGATGGCAAACCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp AGCTCAGAGATTTGGGGCTCTACTACTTTCCTGCAGTaGTCACCGCGGTTTGCCATCAATTTTGCTGCTTGG +
Preference number: 6 (lower is better)
Translates to: SSEIWGSTTFLQ*SPRFAINFAAW
Trigger: CCAAGCAGCAAAATTGATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAGCCCCAAATCTCTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp CATTCTGCTTCTGAACTGCTGGGAAATCACCACCGATaGGTGCCTGACGGCTCAGTTCATCATCTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: HSASELLGNHHR*VPDGSVHHLSA
Trigger: AGCTGAAAGATGATGAACTGAGCCGTCAGGCACCCATCGGTGGTGATTTCCCAGCAGTTCAGAAGCAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp AGAAATAGCTGCAAATCGACGGTTGAGCTCAGAGATTaGGGGCTCTACTACTTTCCTGCAGTGGTCACCGCG +
Preference number: 6 (lower is better)
Translates to: RNSCKSTVELRD*GLYYFPAVVTA
Trigger: CGCGGTGACCACTGCAGGAAAGTAGTAGAGCCCCAAATCTCTGAGCTCAACCGTCGATTTGCAGCTATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp AGAGACAGCCAGTCTGTAAGTTCTGTCCAAGCTCGGTaGAAGTCTGCCAGTGCAGGTACCTCCAACAGCAAA +
Preference number: 6 (lower is better)
Translates to: RDSQSVSSVQAR*KSASAGTSNSK
Trigger: TTTGCTGTTGGAGGTACCTGCACTGGCAGACTTCAACCGAGCTTGGACAGAACTTACAGACTGGCTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp TTGTGCAAAGTTGAGTCTTCGAAACTGAGCAAAATTGCTCTCAATTaGCCGCCAGCGCTTGCTGAGCTGGATCTGAGTTGGCTCCACTGC +
Preference number: 6 (lower is better)
Translates to: LCKVESSKLSKIALN*PPALAELDLSWLHC
Trigger: GCAGTGGAGCCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGCAAATTGAGAGCAATTTTGCTCAGTTTCGAAGACTCAACTTTGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp TCTTCCCCAGTTGCATTCAGTGTTCTGACAACAGCTTaGCGCTGCCCAATGCCATCCTGGAGTTCCTTAAGA +
Preference number: 6 (lower is better)
Translates to: SSPVAFSVLTTA*RCPMPSWSSLR
Trigger: TCTTAAGGAACTCCAGGATGGCATTGGGCAGCGTCAAGCTGTTGTCAGAACACTGAATGCAACTGGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp TTAGTAACCACAGATTGTGTCACTAGAGTAACAGTCTaGCTGGCAGAGGCTCCAGTAGTGCTCAGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: LVTTDCVTRVTV*LAEAPVVLSPG
Trigger: CCCTGGACTGAGCACTACTGGAGCCTCTGCCAGTCAGACTGTTACTCTAGTGACACAATCTGTGGTTACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp AGGCCTTCCAAGAGGTCTAGGAGGCGTTTTCCATCCTaGAGGTCACTGAAGAGGTTGTCTATGTGTTGCTTT +
Preference number: 6 (lower is better)
Translates to: RPSKRSRRRFPS*RSLKRLSMCCF
Trigger: AAAGCAACACATAGACAACCTCTTCAGTGACCTGCAGGATGGAAAACGCCTCCTAGACCTCTTGGAAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS GCA 72 bp GATGGCAGTGGAGACAGGCCTTTATGCTCATGCTGCTaGTTCAGGCGATCATATTCTGCTTGCAGATTCGTT +
Preference number: 6 (lower is better)
Translates to: DGSGDRPLCSCC*FRRSYSACRFV
Trigger: AACGAATCTGCAAGCAGAATATGATCGCCTGAAGCAGCAGCATGAGCATAAAGGCCTGTCTCCACTGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS CCA 72 bp CCACGGCTTCCTGTACTTTCACCTTTTCCATGGAGGTaGCACTTTGCAAGGCTGCTGTCTTCTTCTTGTGAA +
Preference number: 6 (lower is better)
Translates to: PRLPVLSPFPWR*HFARLLSSSCE
Trigger: TTCACAAGAAGAAGACAGCAGCCTTGCAAAGTGCCACCTCCATGGAAAAGGTGAAAGTACAGGAAGCCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp ATTATCTGCAGGATATCCATGGGCTGGTCATTTTGCTaGAGGTTGTGCTGGTCCAGGGCATCACATGCAGCT +
Preference number: 6 (lower is better)
Translates to: IICRISMGWSFC*RLCWSRASHAA
Trigger: AGCTGCATGTGATGCCCTGGACCAGCACAACCTCAAGCAAAATGACCAGCCCATGGATATCCTGCAGATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CAA 72 bp CCGGGGGCATTTCTTCCTCTTGAACTAGGGAAGGAGTaGTTGAGTTGCTCCATCACTTCTTCTAACCCTGTG +
Preference number: 6 (lower is better)
Translates to: PGAFLPLELGKE*LSCSITSSNPV
Trigger: CACAGGGTTAGAAGAAGTGATGGAGCAACTCAACAACTCCTTCCCTAGTTCAAGAGGAAGAAATGCCCCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp GTTGAGTCTTCGAAACTGAGCAAAATTGCTCTCAATTaGCCGCCAGCGCTTGCTGAGCTGGATCTGAGTTGG +
Preference number: 6 (lower is better)
Translates to: VESSKLSKIALN*PPALAELDLSW
Trigger: CCAACTCAGATCCAGCTCAGCAAGCGCTGGCGGCAAATTGAGAGCAATTTTGCTCAGTTTCGAAGACTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp TTCTTCCCCAGTTGCATTCAGTGTTCTGACAACAGCTaGACGCTGCCCAATGCCATCCTGGAGTTCCTTAAG +
Preference number: 6 (lower is better)
Translates to: FFPSCIQCSDNS*TLPNAILEFLK
Trigger: CTTAAGGAACTCCAGGATGGCATTGGGCAGCGTCAAGCTGTTGTCAGAACACTGAATGCAACTGGGGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp AGGAGCTTCTCCTTACGGGAAGCGTCCTGTAGGACATaGGCAGTTGTTTCTGCTTCCGTAATCCAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: RSFSLREASCRT*AVVSASVIQER
Trigger: TCTTTCCTGGATTACGGAAGCAGAAACAACTGCCAATGTCCTACAGGACGCTTCCCGTAAGGAGAAGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp AAACAGTTAATTATCTGCAGGATATCCATGGGCTGGTCATTTTGCTaGAGGTTGTGCTGGTCCAGGGCATCACATGCAGCTGACAGGCTC +
Preference number: 6 (lower is better)
Translates to: KQLIICRISMGWSFC*RLCWSRASHAADRL
Trigger: GAGCCTGTCAGCTGCATGTGATGCCCTGGACCAGCACAACCTCAAGCAAAATGACCAGCCCATGGATATCCTGCAGATAATTAACTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CAA 90 bp AATTCTGTGAGAAATAGCTGCAAATCGACGGTTGAGCTCAGAGATTaGGGGCTCTACTACTTTCCTGCAGTGGTCACCGCGGTTTGCCAT +
Preference number: 6 (lower is better)
Translates to: NSVRNSCKSTVELRD*GLYYFPAVVTAVCH
Trigger: ATGGCAAACCGCGGTGACCACTGCAGGAAAGTAGTAGAGCCCCAAATCTCTGAGCTCAACCGTCGATTTGCAGCTATTTCTCACAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp GCTTCATCTATTTTTCTCTGCCAATCAGCTGAGCGCAGGTTCAATTaGTCCCATTCAGCGTTGACCTCTTCAGCCTGCTTTCGTAGGAGC +
Preference number: 6 (lower is better)
Translates to: ASSIFLCQSAERRFN*SHSALTSSACFRRS
Trigger: GCTCCTACGAAAGCAGGCTGAAGAGGTCAACGCTGAATGGGACAAATTGAACCTGCGCTCAGCTGATTGGCAGAGAAAAATAGATGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp TTGGATTGCATCTACTGTGTGAGGACCTTCTTTCCATaGGTCAAGCTTGCCTCTGACCTGTCCTATGACCTG +
Preference number: 6 (lower is better)
Translates to: LDCIYCVRTFFP*VKLASDLSYDL
Trigger: CAGGTCATAGGACAGGTCAGAGGCAAGCTTGACTCATGGAAAGAAGGTCCTCACACAGTAGATGCAATCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp GAAGCCTCCATCTGGTATTCAGATCTTCCAAAGTGCTaGGGTTATAAGGTGAGAGCTGAATGCCCAGTGTGG +
Preference number: 6 (lower is better)
Translates to: EASIWYSDLPKC*GYKVRAECPVW
Trigger: CCACACTGGGCATTCAGCTCTCACCTTATAACCTCAGCACTTTGGAAGATCTGAATACCAGATGGAGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp GGAGGCCTTTCCAGTCTTAATTCTGTGAGAAATAGCTaGAAATCGACGGTTGAGCTCAGAGATTTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: GGLSSLNSVRNS*KSTVELRDLGL
Trigger: GAGCCCCAAATCTCTGAGCTCAACCGTCGATTTGCAGCTATTTCTCACAGAATTAAGACTGGAAAGGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp GTTAATTATCTGCAGGATATCCATGGGCTGGTCATTTaGCTTGAGGTTGTGCTGGTCCAGGGCATCACATGC +
Preference number: 6 (lower is better)
Translates to: VNYLQDIHGLVI*LEVVLVQGITC
Trigger: GCATGTGATGCCCTGGACCAGCACAACCTCAAGCAAAATGACCAGCCCATGGATATCCTGCAGATAATTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CAA 90 bp TGCCACGGCTTCCTGTACTTTCACCTTTTCCATGGAGGTGGCACTTaGCAAGGCTGCTGTCTTCTTCTTGTGAATAATATCAATCCGACC +
Preference number: 6 (lower is better)
Translates to: CHGFLYFHLFHGGGT*QGCCLLLVNNINPT
Trigger: GGTCGGATTGATATTATTCACAAGAAGAAGACAGCAGCCTTGCAAAGTGCCACCTCCATGGAAAAGGTGAAAGTACAGGAAGCCGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp TATCATCAGCAGAATAGTCCCGAAGAAGTTTCAGTGCCAAATCATTaGCCACGTCTACACTTATCTGCCGTTGACGGAGGTCTTTGGCCA +
Preference number: 6 (lower is better)
Translates to: YHQQNSPEEVSVPNH*PRLHLSAVDGGLWP
Trigger: TGGCCAAAGACCTCCGTCAACGGCAGATAAGTGTAGACGTGGCAAATGATTTGGCACTGAAACTTCTTCGGGACTATTCTGCTGATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp ATGTTGAAGGCATGTTCCAGTCTTTGGGTGGCTGAGTaGTGTGAAACCACACTATTCCAATCAAACAGGTCG +
Preference number: 6 (lower is better)
Translates to: MLKACSSLWVAE*CETTLFQSNRS
Trigger: CGACCTGTTTGATTGGAATAGTGTGGTTTCACAGCACTCAGCCACCCAAAGACTGGAACATGCCTTCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS GCA 72 bp AGAATAGTCCCGAAGAAGTTTCAGTGCCAAATCATTTaGCACGTCTACACTTATCTGCCGTTGACGGAGGTC +
Preference number: 6 (lower is better)
Translates to: RIVPKKFQCQII*HVYTYLPLTEV
Trigger: GACCTCCGTCAACGGCAGATAAGTGTAGACGTGGCAAATGATTTGGCACTGAAACTTCTTCGGGACTATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp TTCAAATTCTGGGCAGCAGTAATGAGTTCTTCCAATTaGGGGCGTCTCTGTTCCAAATCTTGCAGTGTTGCC +
Preference number: 6 (lower is better)
Translates to: FKFWAAVMSSSN*GRLCSKSCSVA
Trigger: GGCAACACTGCAAGATTTGGAACAGAGACGCCCCCAATTGGAAGAACTCATTACTGCTGCCCAGAATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp CCCAAAGGAAGCAACTTCACCCAACTGTCTTGGGATTaGAATAGAATCATGCAGAAGAAGACCCAGCCTACG +
Preference number: 6 (lower is better)
Translates to: PKGSNFTQLSWD*NRIMQKKTQPT
Trigger: CGTAGGCTGGGTCTTCTTCTGCATGATTCTATTCAAATCCCAAGACAGTTGGGTGAAGTTGCTTCCTTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CAA 72 bp GGGGCATTTCTTCCTCTTGAACTAGGGAAGGAGTTGTaGAGTTGCTCCATCACTTCTTCTAACCCTGTGCTT +
Preference number: 6 (lower is better)
Translates to: GAFLPLELGKEL*SCSITSSNPVL
Trigger: AAGCACAGGGTTAGAAGAAGTGATGGAGCAACTCAACAACTCCTTCCCTAGTTCAAGAGGAAGAAATGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp TCAATTTTGCTGCTTGGTCACGTGTGGAGTCCACCTTaGGGCGCATGTCATTCATTTCAGCCTTTAAACGCT +
Preference number: 6 (lower is better)
Translates to: SILLLGHVWSPP*GACHSFQPLNA
Trigger: AGCGTTTAAAGGCTGAAATGAATGACATGCGCCCAAAGGTGGACTCCACACGTGACCAAGCAGCAAAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp CAGAATAGTCCCGAAGAAGTTTCAGTGCCAAATCATTaGCCACGTCTACACTTATCTGCCGTTGACGGAGGT +
Preference number: 6 (lower is better)
Translates to: QNSPEEVSVPNH*PRLHLSAVDGG
Trigger: ACCTCCGTCAACGGCAGATAAGTGTAGACGTGGCAAATGATTTGGCACTGAAACTTCTTCGGGACTATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp ATTTTTCTCTGCCAATCAGCTGAGCGCAGGTTCAATTaGTCCCATTCAGCGTTGACCTCTTCAGCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: IFLCQSAERRFN*SHSALTSSACF
Trigger: AAAGCAGGCTGAAGAGGTCAACGCTGAATGGGACAAATTGAACCTGCGCTCAGCTGATTGGCAGAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp TCCCAGTACCTTAAGTTGTTCTTCCAAAGCAGCTGTTaGATGATCACCGCTGGATTCATCAACCACTACTAC +
Preference number: 6 (lower is better)
Translates to: SQYLKLFFQSSC*MITAGFINHYY
Trigger: GTAGTAGTGGTTGATGAATCCAGCGGTGATCATGCAACAGCTGCTTTGGAAGAACAACTTAAGGTACTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS GCA 72 bp AACAATCCAGCGGTCTTCAGTCCATCTGCAGATATTTaGCCATCGATCTCCCAGTACCTTAAGTTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: NNPAVFSPSADI*PSISQYLKLFF
Trigger: GAAGAACAACTTAAGGTACTGGGAGATCGATGGGCAAATATCTGCAGATGGACTGAAGACCGCTGGATTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS CCA 72 bp TGGCATTTTGCAATGTTGAAGGCATGTTCCAGTCTTTaGGTGGCTGAGTGCTGTGAAACCACACTATTCCAA +
Preference number: 6 (lower is better)
Translates to: WHFAMLKACSSL*VAECCETTLFQ
Trigger: TTGGAATAGTGTGGTTTCACAGCACTCAGCCACCCAAAGACTGGAACATGCCTTCAACATTGCAAAATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS CCA 72 bp CACAGTTATCTGCCTCTTCTTTTGAGGAGGTGGTGGTaGAAGTTCCTCTTGGGCATGTTTTACCATGATTTG +
Preference number: 6 (lower is better)
Translates to: HSYLPLLLRRWW*KFLLGMFYHDL
Trigger: CAAATCATGGTAAAACATGCCCAAGAGGAACTTCCACCACCACCTCCTCAAAAGAAGAGGCAGATAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS CCA 72 bp ATCCACAGTTATCTGCCTCTTCTTTTGAGGAGGTGGTaGTGGAAGTTCCTCTTGGGCATGTTTTACCATGAT +
Preference number: 6 (lower is better)
Translates to: IHSYLPLLLRRW*WKFLLGMFYHD
Trigger: ATCATGGTAAAACATGCCCAAGAGGAACTTCCACCACCACCTCCTCAAAAGAAGAGGCAGATAACTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS CCA 72 bp GCTCCTCCTGTTTCATTTAATTGTTTTAGAATTCCCTaGCGCAGGGGCAACTCTTCTGCCAGTAACTTGACT +
Preference number: 6 (lower is better)
Translates to: APPVSFNCFRIP*RRGNSSASNLT
Trigger: AGTCAAGTTACTGGCAGAAGAGTTGCCCCTGCGCCAGGGAATTCTAAAACAATTAAATGAAACAGGAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp TTTCAAATTCTGGGCAGCAGTAATGAGTTCTTCCAATaGGGGGCGTCTCTGTTCCAAATCTTGCAGTGTTGC +
Preference number: 6 (lower is better)
Translates to: FQILGSSNEFFQ*GASLFQILQCC
Trigger: GCAACACTGCAAGATTTGGAACAGAGACGCCCCCAATTGGAAGAACTCATTACTGCTGCCCAGAATTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp CCTACATTGTGTCCTCTTGAACTAGGGAAGGAGTTGTaGAGTTGCTCCATCACTTCTTCTAACCCTGTGCTT +
Preference number: 6 (lower is better)
Translates to: PTLCPLELGKEL*SCSITSSNPVL
Trigger: AAGCACAGGGTTAGAAGAAGTGATGGAGCAACTCAACAACTCCTTCCCTAGTTCAAGAGGACACAATGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS CAA 72 bp CTTCCTACATTGTGTCCTCTTGAACTAGGGAAGGAGTaGTTGAGTTGCTCCATCACTTCTTCTAACCCTGTG +
Preference number: 6 (lower is better)
Translates to: LPTLCPLELGKE*LSCSITSSNPV
Trigger: CACAGGGTTAGAAGAAGTGATGGAGCAACTCAACAACTCCTTCCCTAGTTCAAGAGGACACAATGTAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239019.2
CDS TCA 72 bp AAGACCCGCAGTGCCTTGTTGACATTGTTCAGGGCATaGACTCTTGTAGATCCCTTTTCTTTTGGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: KTRSALLTLFRA*TLVDPFSFGSF
Trigger: AAAACTGCCAAAAGAAAAGGGATCTACAAGAGTTCATGCCCTGAACAATGTCAACAAGGCACTGCGGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp AGTACCTTAAGTTGTTCTTCCAAAGCAGCTGTTGCATaGTCACCGCTGGATTCATCAACCACTACTACCATG +
Preference number: 6 (lower is better)
Translates to: STLSCSSKAAVA*SPLDSSTTTTM
Trigger: CATGGTAGTAGTGGTTGATGAATCCAGCGGTGATCATGCAACAGCTGCTTTGGAAGAACAACTTAAGGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp GCTGCCAACTGCTTGTCAATGAATTCAAGCGACTCCTaGATTAAGTGCAAGGACTTTTCAATTTCCTGGGCA +
Preference number: 6 (lower is better)
Translates to: AANCLSMNSSDS*IKCKDFSISWA
Trigger: TGCCCAGGAAATTGAAAAGTCCTTGCACTTAATTCAGGAGTCGCTTGAATTCATTGACAAGCAGTTGGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp AACTGGTTTCTAATAGGAGAGAGCCACAGAAGCAGGTaGTCCAGCTGCTCTTCAAGCTGCCTAAAATCTTTT +
Preference number: 6 (lower is better)
Translates to: NWFLIGESHRSR*SSCSSSCLKSF
Trigger: AAAAGATTTTAGGCAGCTTGAAGAGCAGCTGGATCACCTGCTTCTGTGGCTCTCTCCTATTAGAAACCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp ATTGATGTCTTCCAGATCACCCACCATCACTCTCTGTaGTTTTATAACTCGATCAAGCAGAGACAGCCAGTC +
Preference number: 6 (lower is better)
Translates to: IDVFQITHHHSL*FYNSIKQRQPV
Trigger: GACTGGCTGTCTCTGCTTGATCGAGTTATAAAATCACAGAGAGTGATGGTGGGTGATCTGGAAGACATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp CAGCTTTCCACCAACTGGGAGGAAAGTTTCTTCCAGTaGCCCTCAATCTCTTCAAATTCTGACAGATATTTC +
Preference number: 6 (lower is better)
Translates to: QLSTNWEESFFQ*PSISSNSDRYF
Trigger: GAAATATCTGTCAGAATTTGAAGAGATTGAGGGGCACTGGAAGAAACTTTCCTCCCAGTTGGTGGAAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS GCA 72 bp CTTCTTCCAAAGTTTTGCATTTTCCATTCAGCCTGGTaGACAGCCATTGGTAGTTGGTGGTCAGAGTTTCAA +
Preference number: 6 (lower is better)
Translates to: LLPKFCIFHSAW*TAIGSWWSEFQ
Trigger: TTGAAACTCTGACCACCAACTACCAATGGCTGTGCACCAGGCTGAATGGAAAATGCAAAACTTTGGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS GCA 72 bp ACCTCAGATCTTCTAACTTCCTCTTCACTGGCTGAGTaGTTGGTTTTTCCTTATACAAATGCTGCCCTTTCG +
Preference number: 6 (lower is better)
Translates to: TSDLLTSSSLAE*LVFPYTNAALS
Trigger: CGAAAGGGCAGCATTTGTATAAGGAAAAACCAAGCACTCAGCCAGTGAAGAGGAAGTTAGAAGATCTGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp AGAGCAGCTTCAATCTCAGGTTTATTATTGGCAAATTaGAAGCAGCTCCTGACACTCGGCTCAATGTTACTG +
Preference number: 6 (lower is better)
Translates to: RAASISGLLLAN*KQLLTLGSMLL
Trigger: CAGTAACATTGAGCCGAGTGTCAGGAGCTGCTTCCAATTTGCCAATAATAAACCTGAGATTGAAGCTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CCA 72 bp CTGTTTGAGCTTCTTTTCAAGTTTATCTTGCTCTTCTaGCCTTATGGGAGCACTTACAAGTACTGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LFELLFKFILLF*PYGSTYKYCSS
Trigger: GGAGGAGCAGTACTTGTAAGTGCTCCCATAAGGCCAGAAGAGCAAGATAAACTTGAAAAGAAGCTCAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp GAGAGCAGCTTCAATCTCAGGTTTATTATTGGCAAATaGGAAGCAGCTCCTGACACTCGGCTCAATGTTACT +
Preference number: 6 (lower is better)
Translates to: ESSFNLRFIIGK*EAAPDTRLNVT
Trigger: AGTAACATTGAGCCGAGTGTCAGGAGCTGCTTCCAATTTGCCAATAATAAACCTGAGATTGAAGCTGCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000113991.8
ENSMUST00000113992.3
ENSMUST00000114000.8
ENSMUST00000239019.2
ENSMUST00000239269.2
CDS CAA 72 bp GACTGTCGAACCCAGCTCAGAAGAATCTTTTCACTGTaGGTTTGCTGCAATCCAGCCATGATAGTTTTCATC +
Preference number: 6 (lower is better)
Translates to: DCRTQLRRIFSL*VCCNPAMIVFI
Trigger: GATGAAAACTATCATGGCTGGATTGCAGCAAACCAACAGTGAAAAGATTCTTCTGAGCTGGGTTCGACAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS CAA 72 bp TTCCTGGGCAGACTGGATACTCTGTTCAAGCAACTTTaGTTTCCTCACAGCCTTTTTGTAAGACAGATTGCG +
Preference number: 6 (lower is better)
Translates to: FLGRLDTLFKQL*FPHSLFVRQIA
Trigger: CGCAATCTGTCTTACAAAAAGGCTGTGAGGAAACAAAAGTTGCTTGAACAGAGTATCCAGTCTGCCCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239269.2
CDS CAA 90 bp TTGAATTATTTCTTCCCCAGTTGCATTCAGTGTTCTGACAACAGCTaGACGCTGCCCAATGCCATCCTGGAGTTCCTTAAGATACCATTT +
Preference number: 6 (lower is better)
Translates to: LNYFFPSCIQCSDNS*TLPNAILEFLKIPF
Trigger: AAATGGTATCTTAAGGAACTCCAGGATGGCATTGGGCAGCGTCAAGCTGTTGTCAGAACACTGAATGCAACTGGGGAAGAAATAATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp AGTAACACTAAGATAAGGTACAGAGAGTTTGCTTTCTaGCTGCTGGATCCACGTCCTGATGCTACTCATTGT +
Preference number: 6 (lower is better)
Translates to: SNTKIRYREFAF*LLDPRPDATHC
Trigger: ACAATGAGTAGCATCAGGACGTGGATCCAGCAGTCAGAAAGCAAACTCTCTGTACCTTATCTTAGTGTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp GATGCATCAGATTTTCAAGAGATTCTAGCACTTCAGTaGTTTCCTCAGGTCCTGCAGGAACATTTTCCATGG +
Preference number: 6 (lower is better)
Translates to: DASDFQEILALQ*FPQVLQEHFPW
Trigger: CCATGGAAAATGTTCCTGCAGGACCTGAGGAAATCACTGAAGTGCTAGAATCTCTTGAAAATCTGATGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp GAGGTGGCACTTTGCAAGGCTGCTGTCTTCTTCTTGTaGATAATATCAATCCGACCTGAGATTTGTTGCAAA +
Preference number: 6 (lower is better)
Translates to: EVALCKAAVFFL*IISIRPEICCK
Trigger: TTTGCAACAAATCTCAGGTCGGATTGATATTATTCACAAGAAGAAGACAGCAGCCTTGCAAAGTGCCACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp TCATCATCTTTCAGCTGTAGCCAAACAAGAAGTTCCTaGAGAGAAAGATGCAAACGCTTCCACTGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: SSSFSCSQTRSS*RERCKRFHWSE
Trigger: TTCTGACCAGTGGAAGCGTTTGCATCTTTCTCTTCAGGAACTTCTTGTTTGGCTACAGCTGAAAGATGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp TCCTGGGCAACATTTCCACTTCTTGAATGGCTTCAATaGTCACTTGTTGTGGCAAAACTTGAAAGAGTGATG +
Preference number: 6 (lower is better)
Translates to: SWATFPLLEWLQ*SLVVAKLERVM
Trigger: CATCACTCTTTCAAGTTTTGCCACAACAAGTGAGCATTGAAGCCATTCAAGAAGTGGAAATGTTGCCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS CAA 72 bp AGGAGGCGTTTTCCATCCTGCAGGTCACTGAAGAGGTaGTCTATGTGTTGCTTTCCAAACTTAGAAAATTGT +
Preference number: 6 (lower is better)
Translates to: RRRFPSCRSLKR*SMCCFPNLENC
Trigger: ACAATTTTCTAAGTTTGGAAAGCAACACATAGACAACCTCTTCAGTGACCTGCAGGATGGAAAACGCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS CAA 72 bp TTCCTGTACTTTCACCTTTTCCATGGAGGTGGCACTTaGCAAGGCTGCTGTCTTCTTCTTGTGAATAATATC +
Preference number: 6 (lower is better)
Translates to: FLYFHLFHGGGT*QGCCLLLVNNI
Trigger: GATATTATTCACAAGAAGAAGACAGCAGCCTTGCAAAGTGCCACCTCCATGGAAAAGGTGAAAGTACAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp ATGCTGCCCTTTCGACAAAAGCCTTTCCACATCCGCTaGTTTACCGTGAACTGTTACTTCAATCTCCTTTAT +
Preference number: 6 (lower is better)
Translates to: MLPFRQKPFHIR*FTVNCYFNLLY
Trigger: ATAAAGGAGATTGAAGTAACAGTTCACGGTAAACAAGCGGATGTGGAAAGGCTTTTGTCGAAAGGGCAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp TCAGATCTTCTAACTTCCTCTTCACTGGCTGAGTGCTaGGTTTTTCCTTATACAAATGCTGCCCTTTCGACA +
Preference number: 6 (lower is better)
Translates to: SDLLTSSSLAEC*VFPYTNAALST
Trigger: TGTCGAAAGGGCAGCATTTGTATAAGGAAAAACCAAGCACTCAGCCAGTGAAGAGGAAGTTAGAAGATCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp AAGAGGTCTAGGAGGCGTTTTCCATCCTGCAGGTCACTGAAGAGGTaGTCTATGTGTTGCTTTCCAAACTTAGAAAATTGTGCATTTATC +
Preference number: 6 (lower is better)
Translates to: KRSRRRFPSCRSLKR*SMCCFPNLENCAFI
Trigger: GATAAATGCACAATTTTCTAAGTTTGGAAAGCAACACATAGACAACCTCTTCAGTGACCTGCAGGATGGAAAACGCCTCCTAGACCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp TCTTTGGCCCTCACACCATCAAAGATGTGGTTAAAATaGTTAGTAAAGGCCACAAAGTCTGCATCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: SLALTPSKMWLK*LVKATKSASRN
Trigger: GTTTCTGGATGCAGACTTTGTGGCCTTTACTAATCATTTTAACCACATCTTTGATGGTGTGAGGGCCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp TCTTGGCCATCTCCTTCACAGTGTCACTCAGATAGTTaGAGCCATTTTGTTGCTCTTTCAAAGAACTTTGCA +
Preference number: 6 (lower is better)
Translates to: SWPSPSQCHSDS*SHFVALSKNFA
Trigger: TGCAAAGTTCTTTGAAAGAGCAACAAAATGGCTTCAACTATCTGAGTGACACTGTGAAGGAGATGGCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp TTCAGAATCCAAATTACTTGGCATTCCTTCAACTGCTaGTCTCTTCGTCAATTCTGTATCTGTTGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: FRIQITWHSFNC*SLRQFCICCCQ
Trigger: CTGGCAGCAACAGATACAGAATTGACGAAGAGATCAGCAGTTGAAGGAATGCCAAGTAATTTGGATTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp AGTGTTAAGCTCTCTAAGTTCTGTCTCCAGTCTGGATaGAAACTCAAGTTCAGCTTCACTCTTTATCTTCTG +
Preference number: 6 (lower is better)
Translates to: SVKLSKFCLQSG*KLKFSFTLYLL
Trigger: CAGAAGATAAAGAGTGAAGCTGAACTTGAGTTTGCATCCAGACTGGAGACAGAACTTAGAGAGCTTAACACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS GCA 72 bp AAGAGAAAGATGCAAACGCTTCCACTGGTCAGAACTTaGTTCCAAATGGGACCTAATGTTGAGAGACTTTTT +
Preference number: 6 (lower is better)
Translates to: KRKMQTLPLVRT*FQMGPNVERLF
Trigger: AAAAAGTCTCTCAACATTAGGTCCCATTTGGAAGCAAGTTCTGACCAGTGGAAGCGTTTGCATCTTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS GCA 72 bp AAGGTCATTGACACGATTGACATTCTCTTTAAGAGGTaGAATTTCTCCCCGAAGTGCCTTGACTTTTTCAAG +
Preference number: 6 (lower is better)
Translates to: KVIDTIDILFKR*NFSPKCLDFFK
Trigger: CTTGAAAAAGTCAAGGCACTTCGGGGAGAAATTGCACCTCTTAAAGAGAATGTCAATCGTGTCAATGACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp CTTCAACTGCTGATCTCTTCGTCAATTCTGTATCTGTaGCTGCCAGCCATTCTGTTAAGACATTCATTTCCT +
Preference number: 6 (lower is better)
Translates to: LQLLISSSILYL*LPAILLRHSFP
Trigger: AGGAAATGAATGTCTTAACAGAATGGCTGGCAGCAACAGATACAGAATTGACGAAGAGATCAGCAGTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp TTGGCATTCCTTCAACTGCTGATCTCTTCGTCAATTCTGTATCTGTaGCTGCCAGCCATTCTGTTAAGACATTCATTTCCTTTCTCATCT +
Preference number: 6 (lower is better)
Translates to: LAFLQLLISSSILYL*LPAILLRHSFPFSS
Trigger: AGATGAGAAAGGAAATGAATGTCTTAACAGAATGGCTGGCAGCAACAGATACAGAATTGACGAAGAGATCAGCAGTTGAAGGAATGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp TGTTACTTCAATCTCCTTTATGTCAAACGGTCCTGCCTGACTTGGTaGGTTATAAATTTCCAACTGGTTTCTAATAGGAGAGAGCCACAG +
Preference number: 6 (lower is better)
Translates to: CYFNLLYVKRSCLTW*VINFQLVSNRREPQ
Trigger: CTGTGGCTCTCTCCTATTAGAAACCAGTTGGAAATTTATAACCAACCAAGTCAGGCAGGACCGTTTGACATAAAGGAGATTGAAGTAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp TACCAACAAGTCCTTGATGAGATGTCAGATCCATCATaGATCCCTCATGAGCATGAAACTGTTCTTTCACTT +
Preference number: 6 (lower is better)
Translates to: YQQVLDEMSDPS*IPHEHETVLSL
Trigger: AAGTGAAAGAACAGTTTCATGCTCATGAGGGATTCATGATGGATCTGACATCTCATCAAGGACTTGTTGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp CTCTGTAATACAGCTTCTGAACGAGTAATCCAACTGTaGAGTTCAGTTATATCGACATCCAACCTTTTCCTG +
Preference number: 6 (lower is better)
Translates to: LCNTASERVIQL*SSVISTSNLFL
Trigger: CAGGAAAAGGTTGGATGTCGATATAACTGAACTTCACAGTTGGATTACTCGTTCAGAAGCTGTATTACAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp CTTCATATCATAATGAAAGTGTCGCCATTTTTCAACTaGTCTGTCGAATCGCCCTTGTCGTTCCTTGTACAT +
Preference number: 6 (lower is better)
Translates to: LHIIMKVSPFFN*SVESPLSFLVH
Trigger: ATGTACAAGGAACGACAAGGGCGATTCGACAGATCAGTTGAAAAATGGCGACACTTTCATTATGATATGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp ATTAAGTGCAAGGACTTTTCAATTTCCTGGGCAGACTaGATACTCTGTTCAAGCAACTTTTGTTTCCTCACA +
Preference number: 6 (lower is better)
Translates to: IKCKDFSISWAD*ILCSSNFCFLT
Trigger: TGTGAGGAAACAAAAGTTGCTTGAACAGAGTATCCAGTCTGCCCAGGAAATTGAAAAGTCCTTGCACTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp TTCATTCAACTGTTGTCTCCTGTTCTGCAGCTGTTCTaGAACCTCATCCCACTGAATCTGAATTCTTTCAAT +
Preference number: 6 (lower is better)
Translates to: FIQLLSPVLQLF*NLIPLNLNSFN
Trigger: ATTGAAAGAATTCAGATTCAGTGGGATGAGGTTCAAGAACAGCTGCAGAACAGGAGACAACAGTTGAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp ATTGTGATAGATATCTGTGTGAGTTTCAATTTCTCCTaGGAGATCTTGCCATGGTTTCATCAGCTCTCTGAC +
Preference number: 6 (lower is better)
Translates to: IVIDICVSFNFS*EILPWFHQLSD
Trigger: GTCAGAGAGCTGATGAAACCATGGCAAGATCTCCAAGGAGAAATTGAAACTCACACAGATATCTATCACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp TCCCCTGGTTATGTTTCTTCATTTCTTCTAAACTTATCTCATGACTaGTCAAATCTGATTGGATTTTCTGGGCTTCCTGAGGCATTTGAG +
Preference number: 6 (lower is better)
Translates to: SPGYVSSFLLNLSHD*SNLIGFSGLPEAFE
Trigger: CTCAAATGCCTCAGGAAGCCCAGAAAATCCAATCAGATTTGACAAGTCATGAGATAAGTTTAGAAGAAATGAAGAAACATAACCAGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp ACTTCCTGTTCAACACTCTTGGTTTCCAATGCAGGCAAATGCATCTaGACTTCATCTAAAATCATCTTACTTTCCTCTAGACGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: TSCSTLLVSNAGKCI*TSSKIILLSSRRCS
Trigger: TGAACAACGTCTAGAGGAAAGTAAGATGATTTTAGATGAAGTCAAGATGCATTTGCCTGCATTGGAAACCAAGAGTGTTGAACAGGAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp ATCTTCAGTCGTCACTACCATAGTTTCTTCATGGAGAGTGTGAATTaGTGCAAAGTTGAGTCTTCGAAACTGAGCAAAATTGCTCTCAAT +
Preference number: 6 (lower is better)
Translates to: IFSRHYHSFFMESVN*CKVESSKLSKIALN
Trigger: ATTGAGAGCAATTTTGCTCAGTTTCGAAGACTCAACTTTGCACAAATTCACACTCTCCATGAAGAAACTATGGTAGTGACGACTGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp TGTTCCAAATCTTGCAGTGTTGCCTTCTGTTTGATGATCATTTCATaGATGTCTTCCAGATCACCCACCATCACTCTCTGTGATTTTATA +
Preference number: 6 (lower is better)
Translates to: CSKSCSVAFCLMIIS*MSSRSPTITLCDFI
Trigger: TATAAAATCACAGAGAGTGATGGTGGGTGATCTGGAAGACATCAATGAAATGATCATCAAACAGAAGGCAACACTGCAAGATTTGGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp TGCTCACTTGTTGTGGCAAAACTTGAAAGAGTGATGTaGTGTACATTAAGATGGACTTCTTGTCTGGATAAG +
Preference number: 6 (lower is better)
Translates to: CSLVVAKLERVM*CTLRWTSCLDK
Trigger: CTTATCCAGACAAGAAGTCCATCTTAATGTACATCACATCACTCTTTCAAGTTTTGCCACAACAAGTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp TTCAGCCTCCAGTGGTTCAAGCAATTTTTGTATATCTaGGTTAAACTGCTCCAATTCCTTCAAAGGAATGGA +
Preference number: 6 (lower is better)
Translates to: FSLQWFKQFLYI*VKLLQFLQRNG
Trigger: TCCATTCCTTTGAAGGAATTGGAGCAGTTTAACTCAGATATACAAAAATTGCTTGAACCACTGGAGGCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp TTCAATCTCCTTTATGTCAAACGGTCCTGCCTGACTTaGTTGGTTATAAATTTCCAACTGGTTTCTAATAGG +
Preference number: 6 (lower is better)
Translates to: FNLLYVKRSCLT*LVINFQLVSNR
Trigger: CCTATTAGAAACCAGTTGGAAATTTATAACCAACCAAGTCAGGCAGGACCGTTTGACATAAAGGAGATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp CGTCACTACCATAGTTTCTTCATGGAGAGTGTGAATTaGTGCAAAGTTGAGTCTTCGAAACTGAGCAAAATT +
Preference number: 6 (lower is better)
Translates to: RHYHSFFMESVN*CKVESSKLSKI
Trigger: AATTTTGCTCAGTTTCGAAGACTCAACTTTGCACAAATTCACACTCTCCATGAAGAAACTATGGTAGTGACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 72 bp AATCTCCTTTATGTCAAACGGTCCTGCCTGACTTGGTaGGTTATAAATTTCCAACTGGTTTCTAATAGGAGA +
Preference number: 6 (lower is better)
Translates to: NLLYVKRSCLTW*VINFQLVSNRR
Trigger: TCTCCTATTAGAAACCAGTTGGAAATTTATAACCAACCAAGTCAGGCAGGACCGTTTGACATAAAGGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CAA 90 bp TTACTGTTCAGAAGACTCAGTTTATCTTCTACCAAGGTTTCTTTCTaGCCCAACACCATTTTCAAAGACTCTCCTAATTCTGTAACACTC +
Preference number: 6 (lower is better)
Translates to: LLFRRLSLSSTKVSF*PNTIFKDSPNSVTL
Trigger: GAGTGTTACAGAATTAGGAGAGTCTTTGAAAATGGTGTTGGGCAAGAAAGAAACCTTGGTAGAAGATAAACTGAGTCTTCTGAACAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS TCA 72 bp GTCACTGACTTATTTTTCAGTGCCGAAAGTAGATCTTaGTTGAGTGAACTTAGTTTTTCCATGGTTGGCTTT +
Preference number: 6 (lower is better)
Translates to: VTDLFFSAESRS*LSELSFSMVGF
Trigger: AAAGCCAACCATGGAAAAACTAAGTTCACTCAATCAAGATCTACTTTCGGCACTGAAAAATAAGTCAGTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000114000.8
CDS TCA 72 bp GCTTCCAAATGGGACCTAATGTTGAGAGACTTTTTCTaGAGTTCACTCCACTTGAAATTCATGTTATCCAAA +
Preference number: 6 (lower is better)
Translates to: ASKWDLMLRDFF*SSLHLKFMLSK
Trigger: TTTGGATAACATGAATTTCAAGTGGAGTGAACTTCAGAAAAAGTCTCTCAACATTAGGTCCCATTTGGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2
CDS CCA 72 bp CTTTCCTCTAGACGTTGTTCAAAATTGGCTGGTTTTTaGAATAATCGAAATTTCATGGAGACATCTTGTAAT +
Preference number: 6 (lower is better)
Translates to: LSSRRCSKLAGF*NNRNFMETSCN
Trigger: ATTACAAGATGTCTCCATGAAATTTCGATTATTCCAAAAACCAGCCAATTTTGAACAACGTCTAGAGGAAAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000114000.8
ENSMUST00000239269.2