Pregenerated sensors for DMC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022429Ensembl transcript IDs: ENSMUST00000023065.8, ENSMUST00000229408.2, ENSMUST00000230011.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATAAGCAGCAAGAAGCAGTCTGTACCAATTCCCCACCTACTCCTTaGCATCCCCGATCCCTCCAGCGGTTATTGCGAAGGTGGCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: NKQQEAVCTNSPPTP*HPRSLQRLLRRWLH Trigger: ATGAAGCCACCTTCGCAATAACCGCTGGAGGGATCGGGGATGCCAAGGAGTAGGTGGGGAATTGGTACAGACTGCTTCTTGCTGCTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR TCA 90 bp | GGTGATTACAAACAGCTCATGTATACTCCAAGCTTTCACCTCACATaGGCTCTCTTGGGGAACAGCACCCAGTTCTCAGTCCCAGCACCA | + |
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Preference number: 1 (lower is better) Translates to: GDYKQLMYTPSFHLT*ALLGNSTQFSVPAP Trigger: TGGTGCTGGGACTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAGTATACATGAGCTGTTTGTAATCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR CCA 90 bp | TCTGTGTGCTCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTaGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATG | + |
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Preference number: 1 (lower is better) Translates to: SVCSMAYFSRQKEGH*VPLPQYLTGTFMHM Trigger: CATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGAGCACACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR TCA 90 bp | TTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTCCCCAATACCTaGCAGGCACATTTATGCATATGTGTCTATCAAGTAATTCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LVGRRKGTGYPFPNT*QAHLCICVYQVIQE Trigger: TTCTTGAATTACTTGATAGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR-3UTR TCA 90 bp | CACATGAGCTCTCTTGGGGAACAGCACCCAGTTCTCAGTCCCAGCACCATAGTCCCAAGAAATGCTGGATaGGAAGTCTGGGGTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: HMSSLGEQHPVLSPSTIVPRNAG*EVWGWG Trigger: CCCCCAACCCCAGACTTCTCATCCAGCATTTCTTGG...GACTATGGTGCTGGGACTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGCACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGAGCTTTCACCTCACATaGGCTCTCTTGGGGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: RALGTPSPIPDRHIYAYVSFHLT*ALLGNS Trigger: GCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCT...CACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR-3UTR GCA 90 bp | GAACAGCACCCAGTTCTCAGTCCCAGCACCATAGTCATTGGTGCTATGCCCCAACTATGCCCCAAGAAATaGTGGATGAGAAGTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: EQHPVLSPSTIVIGAMPQLCPKK*WMRSLG Trigger: CCCCAGACTTCTCATCCAGCATTTCTTGGGGCATAG...TTGGGGCATAGCACCAATGACTATGGTGCTGGGACTGAGAACTGGGTGCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR-3UTR TCA 90 bp | TGTATACTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTCTTGTTGTGGAAGCGTaGGCCAGAATGTGTCCACCA | + |
|
Preference number: 2 (lower is better) Translates to: CILQAFTSHELSWGTAPSLVVEA*ARMCPP Trigger: TGGTGGACACATTCTGGCTCACGCTTCCACAACAAG...ACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAGTATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGCACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGCTATGCCCCAAGAAATaGTGGATGAGAAGTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RALGTPSPIPDRHIYAYVLCPKK*WMRSLG Trigger: CCCCAGACTTCTCATCCAGCATTTCTTGGGGCATAG...CACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTGCTCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTTCACATGAGCTCTCTTaGGGAACAGCACCCAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: VCSMAYFSRQKEGHWVPLSHELS*GTAPSS Trigger: AGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGA...AAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGAGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR CAA 90 bp | TCTTGGCGATCCTCAGTTCTCCTCTTCCCTTGCGCAAGCTTATTCTaGTTGTGGAAGCGTGAGCCAGAATGTGTCCACCAATGGGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: SWRSSVLLFPCASLF*LWKREPECVHQWVF Trigger: AAAAACCCATTGGTGGACACATTCTGGCTCACGCTTCCACAACAAGAATAAGCTTGCGCAAGGGAAGAGGAGAACTGAGGATCGCCAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGGTTGTGGGGAAGATGATACATATCTGAGCTCCTTTGAATTTCTGTGTGCTCTATGCCCCAAGAAATaGTGGATGAGAAGTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GGCGEDDTYLSSFEFLCALCPKK*WMRSLG Trigger: CCCCAGACTTCTCATCCAGCATTTCTTGGGGCATAG...AGCACACAGAAATTCAAAGGAGCTCAGATATGTATCATCTTCCCCACAACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTTGTGGGGAAGATGATACATATCTGAGCTCCTTTGAATTTCTGTGTGCTTGCCCCAAGAAATGCTaGATGAGAAGTCTGGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GGCGEDDTYLSSFEFLCACPKKC*MRSLGL Trigger: CAACCCCAGACTTCTCATCCAGCATTTCTTGGGGCA...AGCACACAGAAATTCAAAGGAGCTCAGATATGTATCATCTTCCCCACAACCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR-3UTR CCA 90 bp | TCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTCCCCAAGGTCATAGTTGCTCCTaGATCTGCAGTCATTTGATT | + |
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Preference number: 2 (lower is better) Translates to: SMAYFSRQKEGHWVPLPQGHSCS*ICSHLI Trigger: AATCAAATGACTGCAGATCCAGGAGCAACTATGACC...TTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR-3UTR CCA 90 bp | GAACAGCACCCAGTTCTCAGTCCCAGCACCATAGTCATTGGTGCTATGCCCCAACTGCAGTCATTTGATTaGTCACAAAAACAGCAACAT | + |
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Preference number: 2 (lower is better) Translates to: EQHPVLSPSTIVIGAMPQLQSFD*SQKQQH Trigger: ATGTTGCTGTTTTTGTGACCAATCAAATGACTGCAG...TTGGGGCATAGCACCAATGACTATGGTGCTGGGACTGAGAACTGGGTGCTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAATTCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAAGAAGCAAGCTTATTCTTGTTGTaGAAGCGTGAGCCAGAATGT | + |
|
Preference number: 2 (lower is better) Translates to: VNSRLLPTSPAPNKQQEASLFLL*KREPEC Trigger: ACATTCTGGCTCACGCTTCCACAACAAGAATAAGCT...TGCTTCTTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGAATTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTTGTGGGGAAGATGATACATATCTGAGCTCCTTTGAATTTCTGTGTGCTCGGTTATTGCGAAGGTaGCTTCATTTTCAGGCATCT | + |
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Preference number: 2 (lower is better) Translates to: GGCGEDDTYLSSFEFLCARLLRR*LHFQAS Trigger: AGATGCCTGAAAATGAAGCCACCTTCGCAATAACCG...AGCACACAGAAATTCAAAGGAGCTCAGATATGTATCATCTTCCCCACAACCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTCTTATTGTAAAGATGCATGTGAAGGCCACCAGGGTGATTACAAACAGCAGTTGCTCCTGGATCTaGAGTCATTTGATTGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: SPLIVKMHVKATRVITNSSCSWI*SHLIGH Trigger: GTGACCAATCAAATGACTGCAGATCCAGGAGCAACT...GCTGTTTGTAATCACCCTGGTGGCCTTCACATGCATCTTTACAATAAGAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTCTTATTGTAAAGATGCATGTGAAGGCCACCAGGGTGATTACAAACAGCATATCTGAGCTCCTTTaGATTTCTGTGTGCTCAATG | + |
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Preference number: 2 (lower is better) Translates to: SPLIVKMHVKATRVITNSISELL*ISVCSM Trigger: CATTGAGCACACAGAAATTCAAAGGAGCTCAGATAT...GCTGTTTGTAATCACCCTGGTGGCCTTCACATGCATCTTTACAATAAGAGGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR CCA 72 bp | CAAGAAGCAGTCTGTACCAATTCCCCACCTACTCCTTaGCATCCCCGATCCCTCCAGCGGTTATTGCGAAGG | + |
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Preference number: 3 (lower is better) Translates to: QEAVCTNSPPTP*HPRSLQRLLRR Trigger: CCTTCGCAATAACCGCTGGAGGGATCGGGGATGCCAAGGAGTAGGTGGGGAATTGGTACAGACTGCTTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR-3UTR CAA 90 bp | TGTATACTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTTCGCCCAGGCCAGTTTaGATAATTGGGCATGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: CILQAFTSHELSWGTAPSSPRPV*IIGHGS Trigger: GCTACCATGCCCAATTATCAAAACTGGCCTGGGCGA...ACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAGTATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR CCA 72 bp | TGTATACTCCAAGCTTTCACCTCACATGAGCTCTCTTaGGGAACAGCACCCAGTTCTCAGTCCCAGCACCAT | + |
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Preference number: 3 (lower is better) Translates to: CILQAFTSHELS*GTAPSSQSQHH Trigger: ATGGTGCTGGGACTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAGTATACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR CCA 72 bp | CTTCATTTTCAGGCATCTCGGGGCTGTCATAAATCTTaGCGATCCTCAGTTCTCCTCTTCCCTTGCGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: LHFQASRGCHKS*RSSVLLFPCAS Trigger: GCTTGCGCAAGGGAAGAGGAGAACTGAGGATCGCCAAGATTTATGACAGCCCCGAGATGCCTGAAAATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR CCA 72 bp | TCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTaGGTACCCCTTCCCCAATACCTGACAGGCACATTT | + |
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Preference number: 3 (lower is better) Translates to: SMAYFSRQKEGH*VPLPQYLTGTF Trigger: AAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR CCA 72 bp | GTTCTCCTCTTCCCTTGCGCAAGCTTATTCTTGTTGTaGAAGCGTGAGCCAGAATGTGTCCACCAATGGGTT | + |
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Preference number: 3 (lower is better) Translates to: VLLFPCASLFLL*KREPECVHQWV Trigger: AACCCATTGGTGGACACATTCTGGCTCACGCTTCCACAACAAGAATAAGCTTGCGCAAGGGAAGAGGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR-3UTR CAA 90 bp | GAACAGCACCCAGTTCTCAGTCCCAGCACCATAGTCATTGGTGCTATGCCCCAATGGATCTGCAGTCATTaGATTGGTCACAAAAACAGC | + |
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Preference number: 3 (lower is better) Translates to: EQHPVLSPSTIVIGAMPQWICSH*IGHKNS Trigger: GCTGTTTTTGTGACCAATCAAATGACTGCAGATCCA...TTGGGGCATAGCACCAATGACTATGGTGCTGGGACTGAGAACTGGGTGCTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR TCA 72 bp | AAACAGCTCATGTATACTCCAAGCTTTCACCTCACATaGGCTCTCTTGGGGAACAGCACCCAGTTCTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: KQLMYTPSFHLT*ALLGNSTQFSV Trigger: GACTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAGTATACATGAGCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGATGTAAATTCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAATGCGCAAGCTTATTCTaGTTGTGGAAGCGTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: QDVNSRLLPTSPAPNKQQCASLF*LWKREP Trigger: TGGCTCACGCTTCCACAACAAGAATAAGCTTGCGCA...TTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGAATTTACATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR GCA 72 bp | GGGATCAGCCTGAAAGGTCATAGTTGCTCCTGGATCTaGAGTCATTTGATTGGTCACAAAAACAGCAACATT | + |
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Preference number: 3 (lower is better) Translates to: GISLKGHSCSWI*SHLIGHKNSNI Trigger: AATGTTGCTGTTTTTGTGACCAATCAAATGACTGCAGATCCAGGAGCAACTATGACCTTTCAGGCTGATCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR CAA 72 bp | GCAAGAAGCAGTCTGTACCAATTCCCCACCTACTCCTaGGCATCCCCGATCCCTCCAGCGGTTATTGCGAAG | + |
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Preference number: 4 (lower is better) Translates to: ARSSLYQFPTYS*ASPIPPAVIAK Trigger: CTTCGCAATAACCGCTGGAGGGATCGGGGATGCCAAGGAGTAGGTGGGGAATTGGTACAGACTGCTTCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| CDS-3UTR TCA 90 bp | GCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTCCCCAATACCTGCCTGTTCCTGGAAGTTaGGCTGTCACACAGAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: AYFSRQKEGHWVPLPQYLPVPGS*AVTQRV Trigger: TACCCTCTGTGTGACAGCTCAACTTCCAGGAACAGG...CAGGTATTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
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| CDS-3UTR TCA 90 bp | CTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTTCTCAGCTTCATGGTCTACGTTaGAGCGGTCAGCAATGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LQAFTSHELSWGTAPSSQLHGLR*SGQQCP Trigger: GGGACATTGCTGACCGCTTCAACGTAGACCATGAAG...CTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
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| CDS-3UTR TCA 90 bp | TCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTCCCCAACTTCTGAGAGGCCTTTaGCATTGCAGAGGGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SMAYFSRQKEGHWVPLPQLLRGL*HCRGLF Trigger: GAAGAGCCCTCTGCAATGTCAAAGGCCTCTCAGAAG...TTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR TCA 90 bp | GTGTGCTCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTGATAATCTTTCCACCTaGGTAGCCGCCTGTTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VCSMAYFSRQKEGHWVPLDNLST*VAACSW Trigger: CCAGGAACAGGCGGCTACTCAGGTGGAAAGATTATC...AAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGAGCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
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| CDS-3UTR TCA 90 bp | GAACAGCACCCAGTTCTCAGTCCCAGCACCATAGTCATTGGTGCTATGCCCCAAATTCCCCACGGCCACTaGAATCCACTCGAAAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: EQHPVLSPSTIVIGAMPQIPHGH*NPLEKV Trigger: CACTTTTTCGAGTGGATTTCAGTGGCCGTGGGGAAT...TTGGGGCATAGCACCAATGACTATGGTGCTGGGACTGAGAACTGGGTGCTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CCA 90 bp | TCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTCCCCAAGTAGCCGCCTGTTCCTaGAAGTTGAGCTGTCACACA | + |
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Preference number: 4 (lower is better) Translates to: SMAYFSRQKEGHWVPLPQVAACS*KLSCHT Trigger: TGTGTGACAGCTCAACTTCCAGGAACAGGCGGCTAC...TTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
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| CDS-3UTR TCA 90 bp | CTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCTATCCTTGTTGTGGAAGCGTaGGCCAGAATGTGTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: LGTPSPIPDRHIYAYVSILVVEA*ARMCPP Trigger: TGGTGGACACATTCTGGCTCACGCTTCCACAACAAG...GATAGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CCA 90 bp | CAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAAGAAGCAGTCTGTAAGTCGTGACAACATCTaGGCCAATTTTTGCTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: QGCFPLLQPLISSKKQSVSRDNI*ANFCWR Trigger: ACGCCAGCAAAAATTGGCCCAGATGTTGTCACGACT...TACAGACTGCTTCTTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| 3UTR CAA 72 bp | TCAGTTCTCCTCTTCCCTTGCGCAAGCTTATTCTTGTaGTGGAAGCGTGAGCCAGAATGTGTCCACCAATGG | + |
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Preference number: 4 (lower is better) Translates to: SVLLFPCASLFL*WKREPECVHQW Trigger: CCATTGGTGGACACATTCTGGCTCACGCTTCCACAACAAGAATAAGCTTGCGCAAGGGAAGAGGAGAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| 3UTR CAA 72 bp | TCCTCAGTTCTCCTCTTCCCTTGCGCAAGCTTATTCTaGTTGTGGAAGCGTGAGCCAGAATGTGTCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: SSVLLFPCASLF*LWKREPECVHQ Trigger: TTGGTGGACACATTCTGGCTCACGCTTCCACAACAAGAATAAGCTTGCGCAAGGGAAGAGGAGAACTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
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| CDS-3UTR GCA 90 bp | CCCACTTCTCCAGCCCCTAATAAGCAGCAAGAAGCAGTCTGTACCAATTCCCCAGCCATGTTAATCCCATaGTTCTGCAACAGGTCAATG | + |
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Preference number: 4 (lower is better) Translates to: PTSPAPNKQQEAVCTNSPAMLIP*FCNRSM Trigger: CATTGACCTGTTGCAGAAGCATGGGATTAACATGGC...TGGGGAATTGGTACAGACTGCTTCTTGCTGCTTATTAGGGGCTGGAGAAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR GCA 90 bp | ATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTCCCCAATACGCCATGTTAATCCCATaGTTCTGCAACAGGTCAATG | + |
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Preference number: 4 (lower is better) Translates to: MAYFSRQKEGHWVPLPQYAMLIP*FCNRSM Trigger: CATTGACCTGTTGCAGAAGCATGGGATTAACATGGC...GTATTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR GCA 90 bp | TGTATACTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTATCTGGGCCAATTTTTaGTGGCGTTCAGCCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: CILQAFTSHELSWGTAPSIWANF*WRSANS Trigger: GGAATTGGCTGAACGCCAGCAAAAATTGGCCCAGAT...ACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAGTATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR GCA 90 bp | CTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCTATCCCCTCCAGCGGTTATTaGGAAGGTGGCTTCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: LGTPSPIPDRHIYAYVSIPSSGY*EGGFIF Trigger: GAAAATGAAGCCACCTTCGCAATAACCGCTGGAGGG...GATAGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR GCA 90 bp | CACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCTACCCTCCAGCGGTTATTaGGAAGGTGGCTTCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HWVPLPQYLTGTFMHMCLPSSGY*EGGFIF Trigger: GAAAATGAAGCCACCTTCGCAATAACCGCTGGAGGG...TAGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR CCA 90 bp | TCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTCCCCAAGATTCCTCATCATCTTaGAATCCCGATTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SMAYFSRQKEGHWVPLPQDSSSS*NPDSSC Trigger: GCAGGAAGAATCGGGATTCCAAGATGATGAGGAATC...TTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAAGAAGCAGTCTGTAGATTCCTCATCATCTTaGAATCCCGATTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGCFPLLQPLISSKKQSVDSSSS*NPDSSC Trigger: GCAGGAAGAATCGGGATTCCAAGATGATGAGGAATC...TACAGACTGCTTCTTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
||
| CDS-3UTR CCA 90 bp | GCACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCTGGCTGTCATAAATCTTaGCGATCCTCAGTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGTPSPIPDRHIYAYVSGCHKS*RSSVLL Trigger: GAGGAGAACTGAGGATCGCCAAGATTTATGACAGCC...AGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCGGTTATTGCGAAGGTaGCTTCATTTTCAGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GHWVPLPQYLTGTFMHMCRLLRR*LHFQAS Trigger: AGATGCCTGAAAATGAAGCCACCTTCGCAATAACCG...ACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTTCTCAGAACAGGTCAATGTCTTaGAACAGAGATTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LQAFTSHELSWGTAPSSQNRSMS*NRDSSS Trigger: TGATGAGGAATCTCTGTTTCAAGACATTGACCTGTT...CTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCTTATTGTAAAGATGCATGTGAAGGCCACCAGGGTGATTACAAACAGCCTTGTTGTGGAAGCGTaGGCCAGAATGTGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLIVKMHVKATRVITNSLVVEA*ARMCPP Trigger: TGGTGGACACATTCTGGCTCACGCTTCCACAACAAG...GCTGTTTGTAATCACCCTGGTGGCCTTCACATGCATCTTTACAATAAGAGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCTATCATCTGGGCCAATTTTTaGTGGCGTTCAGCCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGTPSPIPDRHIYAYVSIIWANF*WRSANS Trigger: GGAATTGGCTGAACGCCAGCAAAAATTGGCCCAGAT...GATAGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCTATCTCCAGTACTGCTTCATaGTCTACGTTGAAGCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTPSPIPDRHIYAYVSISSTAS*STLKRS Trigger: TGACCGCTTCAACGTAGACCATGAAGCAGTACTGGA...GATAGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
||
| CDS-3UTR CCA 90 bp | CACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCTAAGTCGTGACAACATCTaGGCCAATTTTTGCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HWVPLPQYLTGTFMHMCLSRDNI*ANFCWR Trigger: ACGCCAGCAAAAATTGGCCCAGATGTTGTCACGACT...TAGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGGGTCATAGTTGCTCCTaGATCTGCAGTCATTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: RALGTPSPIPDRHIYAYVGHSCS*ICSHLI Trigger: AATCAAATGACTGCAGATCCAGGAGCAACTATGACC...CACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTGGTCATAGTTGCTCCTaGATCTGCAGTCATTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VCSMAYFSRQKEGHWVPLGHSCS*ICSHLI Trigger: AATCAAATGACTGCAGATCCAGGAGCAACTATGACC...AAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGAGCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCTCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTAGCTTATTCTTGTTGTaGAAGCGTGAGCCAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VCSMAYFSRQKEGHWVPLSLFLL*KREPEC Trigger: ACATTCTGGCTCACGCTTCCACAACAAGAATAAGCT...AAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGAGCACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR CCA 90 bp | TGTATACTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTCGGTTATTGCGAAGGTaGCTTCATTTTCAGGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: CILQAFTSHELSWGTAPSRLLRR*LHFQAS Trigger: AGATGCCTGAAAATGAAGCCACCTTCGCAATAACCG...ACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAGTATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR TCA 90 bp | CTCTTATTTCAAGATGTAAATTCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATCTTCTGAGAGGCCTTTaGCATTGCAGAGGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLFQDVNSRLLPTSPAPNLLRGL*HCRGLF Trigger: GAAGAGCCCTCTGCAATGTCAAAGGCCTCTCAGAAG...ATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGAATTTACATCTTGAAATAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCTTATTGTAAAGATGCATGTGAAGGCCACCAGGGTGATTACAAACAGCATTCCCCACGGCCACTaGAATCCACTCGAAAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLIVKMHVKATRVITNSIPHGH*NPLEKV Trigger: CACTTTTTCGAGTGGATTTCAGTGGCCGTGGGGAAT...GCTGTTTGTAATCACCCTGGTGGCCTTCACATGCATCTTTACAATAAGAGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR GCA 90 bp | GAACAGCACCCAGTTCTCAGTCCCAGCACCATAGTCATTGGTGCTATGCCCCAAAAAAGCTTCTGTAATTaGCATACTTTCAATGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EQHPVLSPSTIVIGAMPQKSFCN*HTFNAT Trigger: GGTGGCATTGAAAGTATGGCAATTACAGAAGCTTTT...TTGGGGCATAGCACCAATGACTATGGTGCTGGGACTGAGAACTGGGTGCTGTTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR GCA 90 bp | GTAAATTCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAAGAAGCACACGTTGTCCAGTACTaGTTCATGGTCTACGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VNSRLLPTSPAPNKQQEAHVVQY*FMVYVE Trigger: TTCAACGTAGACCATGAAGCAGTACTGGACAACGTG...TGCTTCTTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGAATTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
||
| CDS-3UTR CCA 90 bp | GCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTCCCCAATACCTGAATTTATCAAATTCCTaGCTCCCAGTAGTGATATGG | + |
|
Preference number: 4 (lower is better) Translates to: AYFSRQKEGHWVPLPQYLNLSNS*LPVVIW Trigger: CCATATCACTACTGGGAGCCAGGAATTTGATAAATT...CAGGTATTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CCA 90 bp | CTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTTCTCAGAATTTATCAAATTCCTaGCTCCCAGTAGTGATATGG | + |
|
Preference number: 4 (lower is better) Translates to: LQAFTSHELSWGTAPSSQNLSNS*LPVVIW Trigger: CCATATCACTACTGGGAGCCAGGAATTTGATAAATT...CTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CCA 90 bp | TGTATACTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTAGCTTATTCTTGTTGTaGAAGCGTGAGCCAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CILQAFTSHELSWGTAPSSLFLL*KREPEC Trigger: ACATTCTGGCTCACGCTTCCACAACAAGAATAAGCT...ACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAGTATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR GCA 90 bp | CAAGATGTAAATTCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAAGCCATGTTAATCCCATaGTTCTGCAACAGGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: QDVNSRLLPTSPAPNKQQAMLIP*FCNRSM Trigger: CATTGACCTGTTGCAGAAGCATGGGATTAACATGGC...TTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGAATTTACATCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR GCA 90 bp | AGGGCACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGAAAAGCTTCTGTAATTaGCATACTTTCAATGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RALGTPSPIPDRHIYAYVKSFCN*HTFNAT Trigger: GGTGGCATTGAAAGTATGGCAATTACAGAAGCTTTT...CACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR GCA 90 bp | TCTCCTCTTATTGTAAAGATGCATGTGAAGGCCACCAGGGTGATTACAAACAGCACTAGTATAGGCACGTaGATAGAGCACGTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLIVKMHVKATRVITNSTSIGT*IEHVVQ Trigger: CTGGACAACGTGCTCTATGCACGTGCCTATACTAGT...GCTGTTTGTAATCACCCTGGTGGCCTTCACATGCATCTTTACAATAAGAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTTATTGTAAAGATGCATGTGAAGGCCACCAGGGTGATTACAAACAGCGGCTGTCATAAATCTTaGCGATCCTCAGTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPLIVKMHVKATRVITNSGCHKS*RSSVLL Trigger: GAGGAGAACTGAGGATCGCCAAGATTTATGACAGCC...GCTGTTTGTAATCACCCTGGTGGCCTTCACATGCATCTTTACAATAAGAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR TCA 90 bp | GTAAATTCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAAGAAGCAAACAGGTCAATGTCTTaGAACAGAGATTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VNSRLLPTSPAPNKQQEANRSMS*NRDSSS Trigger: TGATGAGGAATCTCTGTTTCAAGACATTGACCTGTT...TGCTTCTTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGAATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR TCA 90 bp | CTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCTATCAACAGGTCAATGTCTTaGAACAGAGATTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LGTPSPIPDRHIYAYVSINRSMS*NRDSSS Trigger: TGATGAGGAATCTCTGTTTCAAGACATTGACCTGTT...GATAGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR GCA 90 bp | CTCTTATTTCAAGATGTAAATTCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAGTTGCTCCTGGATCTaGAGTCATTTGATTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFQDVNSRLLPTSPAPNSCSWI*SHLIGH Trigger: GTGACCAATCAAATGACTGCAGATCCAGGAGCAACT...ATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGAATTTACATCTTGAAATAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CCA 90 bp | TGTAAAGATGCATGTGAAGGCCACCAGGGTGATTACAAACAGCTCATGTATACTGATTCCTCATCATCTTaGAATCCCGATTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CKDACEGHQGDYKQLMYTDSSSS*NPDSSC Trigger: GCAGGAAGAATCGGGATTCCAAGATGATGAGGAATC...AGTATACATGAGCTGTTTGTAATCACCCTGGTGGCCTTCACATGCATCTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR CCA 90 bp | ACATATCTGAGCTCCTTTGAATTTCTGTGTGCTCAATGGCTTACTTTAGTAGGCGTCCCGAAGGCGATCTaGACGGAAAGTATTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TYLSSFEFLCAQWLTLVGVPKAI*TESIFC Trigger: ACAGAAAATACTTTCCGTCCAGATCGCCTTCGGGAC...GCCTACTAAAGTAAGCCATTGAGCACACAGAAATTCAAAGGAGCTCAGATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCTATCCTGCAGTCATTTGATTaGTCACAAAAACAGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LGTPSPIPDRHIYAYVSILQSFD*SQKQQH Trigger: ATGTTGCTGTTTTTGTGACCAATCAAATGACTGCAG...GATAGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR GCA 90 bp | CAAGATGTAAATTCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAATTGCCATACTTTCAATaGCACCTCCTAGTAATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QDVNSRLLPTSPAPNKQQLPYFQ*HLLVIY Trigger: ATAAATTACTAGGAGGTGGCATTGAAAGTATGGCAA...TTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGAATTTACATCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAAGATGCATGTGAAGGCCACCAGGGTGATTACAAACAGCTCATGTATACTTTGCCATACTTTCAATaGCACCTCCTAGTAATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CKDACEGHQGDYKQLMYTLPYFQ*HLLVIY Trigger: ATAAATTACTAGGAGGTGGCATTGAAAGTATGGCAA...AGTATACATGAGCTGTTTGTAATCACCCTGGTGGCCTTCACATGCATCTTTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CAA 90 bp | CTCGGGGCTGTCATAAATCTTGGCGATCCTCAGTTCTCCTCTTCCCTTGCGCAAGCTTCTGAGAGGCCTTaGACATTGCAGAGGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGAVINLGDPQFSSSLAQASERP*TLQRAL Trigger: AAGAGCCCTCTGCAATGTCAAAGGCCTCTCAGAAGC...TTGCGCAAGGGAAGAGGAGAACTGAGGATCGCCAAGATTTATGACAGCCCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000230011.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAAGAAGCAGTCTGTGCCTGTTCCTGGAAGTaGAGCTGTCACACAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRLLPTSPAPNKQQEAVCACSWK*SCHTEG Trigger: ACCCTCTGTGTGACAGCTCAACTTCCAGGAACAGGC...ACAGACTGCTTCTTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTTCTCAGGCTTCATGGTCTACGTaGAAGCGGTCAGCAATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQAFTSHELSWGTAPSSQASWST*KRSAMS Trigger: GGACATTGCTGACCGCTTCAACGTAGACCATGAAGC...CTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
||
| CDS TCA 90 bp | CACGTGCATAGAGCACGTTGTCCAGTACTGCTTCATGGTCTACGTTaGAGCGGTCAGCAATGTCCCGAAGGCGATCTGGACGGAAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HVHRARCPVLLHGLR*SGQQCPEGDLDGKY Trigger: ATACTTTCCGTCCAGATCGCCTTCGGGACATTGCTGACCGCTTCAACGTAGACCATGAAGCAGTACTGGACAACGTGCTCTATGCACGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
||
| CDS GCA 90 bp | ATGCTCACTAGTATAGGCACGTGCATAGAGCACGTTGTCCAGTACTaGTTCATGGTCTACGTTGAAGCGGTCAGCAATGTCCCGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MLTSIGTCIEHVVQY*FMVYVEAVSNVPKA Trigger: CGCCTTCGGGACATTGCTGACCGCTTCAACGTAGACCATGAAGCAGTACTGGACAACGTGCTCTATGCACGTGCCTATACTAGTGAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
||
| CDS-3UTR CAA 90 bp | GAACAGCACCCAGTTCTCAGTCCCAGCACCATAGTCATTGGTGCTATGCCCCAAGAGAGGCCTTTGACATaGCAGAGGGCTCTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EQHPVLSPSTIVIGAMPQERPLT*QRALLV Trigger: AACAAGAAGAGCCCTCTGCAATGTCAAAGGCCTCTC...TTGGGGCATAGCACCAATGACTATGGTGCTGGGACTGAGAACTGGGTGCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
||
| CDS-3UTR CAA 90 bp | GGGCACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTGCTTCTGAGAGGCCTTaGACATTGCAGAGGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GHWVPLPQYLTGTFMHMCASERP*TLQRAL Trigger: AAGAGCCCTCTGCAATGTCAAAGGCCTCTCAGAAGC...ACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAAGAAGCAGTCTGTAGCTTCTGAGAGGCCTTaGACATTGCAGAGGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QGCFPLLQPLISSKKQSVASERP*TLQRAL Trigger: AAGAGCCCTCTGCAATGTCAAAGGCCTCTCAGAAGC...TACAGACTGCTTCTTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
||
| CDS-3UTR CAA 90 bp | CATGAGCTCTCTTGGGGAACAGCACCCAGTTCTCAGTCCCAGCACCATAGTCATCATCTGGGCCAATTTTaGCTGGCGTTCAGCCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: HELSWGTAPSSQSQHHSHHLGQF*LAFSQF Trigger: GAATTGGCTGAACGCCAGCAAAAATTGGCCCAGATG...ATGACTATGGTGCTGGGACTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTTCTCAGCATCTGGGCCAATTTTaGCTGGCGTTCAGCCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LQAFTSHELSWGTAPSSQHLGQF*LAFSQF Trigger: GAATTGGCTGAACGCCAGCAAAAATTGGCCCAGATG...CTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
||
| CDS-3UTR CAA 90 bp | GAACAGCACCCAGTTCTCAGTCCCAGCACCATAGTCATTGGTGCTATGCCCCAATGCGCAAGCTTATTCTaGTTGTGGAAGCGTGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: EQHPVLSPSTIVIGAMPQCASLF*LWKREP Trigger: TGGCTCACGCTTCCACAACAAGAATAAGCTTGCGCA...TTGGGGCATAGCACCAATGACTATGGTGCTGGGACTGAGAACTGGGTGCTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CAA 90 bp | TCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTCCCCAAGAGAGGCCTTTGACATaGCAGAGGGCTCTTCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SMAYFSRQKEGHWVPLPQERPLT*QRALLV Trigger: AACAAGAAGAGCCCTCTGCAATGTCAAAGGCCTCTC...TTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR CAA 90 bp | GCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTCCCCAATACCTGGCAAGCTTATTCTTGTaGTGGAAGCGTGAGCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: AYFSRQKEGHWVPLPQYLASLFL*WKREPE Trigger: TTCTGGCTCACGCTTCCACAACAAGAATAAGCTTGC...CAGGTATTGGGGAAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CAA 90 bp | GTGTGCTCAATGGCTTACTTTAGTAGGCAGAAGGAAGGGCACTGGGTACCCCTTTGCGCAAGCTTATTCTaGTTGTGGAAGCGTGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VCSMAYFSRQKEGHWVPLCASLF*LWKREP Trigger: TGGCTCACGCTTCCACAACAAGAATAAGCTTGCGCA...AAGGGGTACCCAGTGCCCTTCCTTCTGCCTACTAAAGTAAGCCATTGAGCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CAA 90 bp | GGGCACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTTCCCTCCAGCGGTTATaGCGAAGGTGGCTTCATTTT | + |
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Preference number: 5 (lower is better) Translates to: GHWVPLPQYLTGTFMHMCSLQRL*RRWLHF Trigger: AAAATGAAGCCACCTTCGCAATAACCGCTGGAGGGA...ACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CAA 90 bp | CATGAGCTCTCTTGGGGAACAGCACCCAGTTCTCAGTCCCAGCACCATAGTCATAGATTCCTCATCATCTaGGAATCCCGATTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HELSWGTAPSSQSQHHSHRFLII*ESRFFL Trigger: CAGGAAGAATCGGGATTCCAAGATGATGAGGAATCT...ATGACTATGGTGCTGGGACTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR CAA 90 bp | TCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAAGAAGCAGTCTGTCCTGGTTCAATAAGCTaGTTGGCTGCCTCTTTAATC | + |
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Preference number: 5 (lower is better) Translates to: SRLLPTSPAPNKQQEAVCPGSIS*LAASLI Trigger: GATTAAAGAGGCAGCCAACAAGCTTATTGAACCAGG...ACAGACTGCTTCTTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR CAA 90 bp | TCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTTCTCAGTCCCAGCACCTCAATGATCAATAGTTaGAAAATGCCAGCTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SPHMSSLGEQHPVLSPSTSMINS*KMPASS Trigger: TGAGGAAGCTGGCATTTTCAAACTATTGATCATTGA...GGTGCTGGGACTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CAA 90 bp | TGTATACTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTCCTGGTTCAATAAGCTaGTTGGCTGCCTCTTTAATC | + |
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Preference number: 5 (lower is better) Translates to: CILQAFTSHELSWGTAPSPGSIS*LAASLI Trigger: GATTAAAGAGGCAGCCAACAAGCTTATTGAACCAGG...ACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAGTATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR CAA 90 bp | GGGCACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTTGGATCTGCAGTCATTaGATTGGTCACAAAAACAGC | + |
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Preference number: 5 (lower is better) Translates to: GHWVPLPQYLTGTFMHMCWICSH*IGHKNS Trigger: GCTGTTTTTGTGACCAATCAAATGACTGCAGATCCA...ACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CAA 90 bp | CAAGATGTAAATTCAAGGCTGCTTCCCACTTCTCCAGCCCCTAATAAGCAGCAATCCCTCCAGCGGTTATaGCGAAGGTGGCTTCATTTT | + |
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Preference number: 5 (lower is better) Translates to: QDVNSRLLPTSPAPNKQQSLQRL*RRWLHF Trigger: AAAATGAAGCCACCTTCGCAATAACCGCTGGAGGGA...TTGCTGCTTATTAGGGGCTGGAGAAGTGGGAAGCAGCCTTGAATTTACATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CAA 90 bp | CACTGGGTACCCCTTCCCCAATACCTGACAGGCACATTTATGCATATGTGTCTAAGATTCCTCATCATCTaGGAATCCCGATTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HWVPLPQYLTGTFMHMCLRFLII*ESRFFL Trigger: CAGGAAGAATCGGGATTCCAAGATGATGAGGAATCT...TAGACACATATGCATAAATGTGCCTGTCAGGTATTGGGGAAGGGGTACCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR CAA 90 bp | CTCCAAGCTTTCACCTCACATGAGCTCTCTTGGGGAACAGCACCCAGTTCTCAGTCAATGATCAATAGTTaGAAAATGCCAGCTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LQAFTSHELSWGTAPSSQSMINS*KMPASS Trigger: TGAGGAAGCTGGCATTTTCAAACTATTGATCATTGA...CTGAGAACTGGGTGCTGTTCCCCAAGAGAGCTCATGTGAGGTGAAAGCTTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTCTTATTGTAAAGATGCATGTGAAGGCCACCAGGGTGATTACAAACAGCGCAAGCTTATTCTTGTaGTGGAAGCGTGAGCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SPLIVKMHVKATRVITNSASLFL*WKREPE Trigger: TTCTGGCTCACGCTTCCACAACAAGAATAAGCTTGC...GCTGTTTGTAATCACCCTGGTGGCCTTCACATGCATCTTTACAATAAGAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 |
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| CDS TCA 90 bp | CTCCCAGTAGTGATATGGAATACCATCTTCCTCCTTTCACTGTACTaGAATGCAGTTAGGAATCCTGGTTCAATAAGCTTGTTGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LPVVIWNTIFLLSLY*NAVRNPGSISLLAA Trigger: GGCAGCCAACAAGCTTATTGAACCAGGATTCCTAACTGCATTTCAGTACAGTGAAAGGAGGAAGATGGTATTCCATATCACTACTGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR CAA 90 bp | TCTCCTCTTATTGTAAAGATGCATGTGAAGGCCACCAGGGTGATTACAAACAGCCCTGGTTCAATAAGCTaGTTGGCTGCCTCTTTAATC | + |
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Preference number: 5 (lower is better) Translates to: SPLIVKMHVKATRVITNSPGSIS*LAASLI Trigger: GATTAAAGAGGCAGCCAACAAGCTTATTGAACCAGG...GCTGTTTGTAATCACCCTGGTGGCCTTCACATGCATCTTTACAATAAGAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS-3UTR CAA 90 bp | ACATATCTGAGCTCCTTTGAATTTCTGTGTGCTCAATGGCTTACTTTAGTAGGCAGATTCCTCATCATCTaGGAATCCCGATTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: TYLSSFEFLCAQWLTLVGRFLII*ESRFFL Trigger: CAGGAAGAATCGGGATTCCAAGATGATGAGGAATCT...GCCTACTAAAGTAAGCCATTGAGCACACAGAAATTCAAAGGAGCTCAGATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS TCA 72 bp | AGAGCACGTTGTCCAGTACTGCTTCATGGTCTACGTTaGAGCGGTCAGCAATGTCCCGAAGGCGATCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: RARCPVLLHGLR*SGQQCPEGDLD Trigger: GTCCAGATCGCCTTCGGGACATTGCTGACCGCTTCAACGTAGACCATGAAGCAGTACTGGACAACGTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
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| CDS GCA 72 bp | AGTATAGGCACGTGCATAGAGCACGTTGTCCAGTACTaGTTCATGGTCTACGTTGAAGCGGTCAGCAATGTC | + |
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Preference number: 6 (lower is better) Translates to: SIGTCIEHVVQY*FMVYVEAVSNV Trigger: GACATTGCTGACCGCTTCAACGTAGACCATGAAGCAGTACTGGACAACGTGCTCTATGCACGTGCCTATACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
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| CDS CAA 90 bp | CCTGGTTCAATAAGCTTGTTGGCTGCCTCTTTAATCTTTTCCACTTaGGCTTCTGAGAGGCCTTTGACATTGCAGAGGGCTCTTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PGSISLLAASLIFST*ASERPLTLQRALLV Trigger: AACAAGAAGAGCCCTCTGCAATGTCAAAGGCCTCTCAGAAGCCAAAGTGGAAAAGATTAAAGAGGCAGCCAACAAGCTTATTGAACCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS TCA 72 bp | AGTATTTTCTGTATCGATGAAGATAATCTTTCCACCTaGGTAGCCGCCTGTTCCTGGAAGTTGAGCTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SIFCIDEDNLST*VAACSWKLSCH Trigger: GTGACAGCTCAACTTCCAGGAACAGGCGGCTACTCAGGTGGAAAGATTATCTTCATCGATACAGAAAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023065.8 |
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| CDS CAA 90 bp | TTGGCTGCCTCTTTAATCTTTTCCACTTTGGCTTCTGAGAGGCCTTaGACATTGCAGAGGGCTCTTCTTGTTGTCATTTGTATCCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LAASLIFSTLASERP*TLQRALLVVICIPL Trigger: TAAAGGGATACAAATGACAACAAGAAGAGCCCTCTGCAATGTCAAAGGCCTCTCAGAAGCCAAAGTGGAAAAGATTAAAGAGGCAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS TCA 72 bp | ATGTTAATCCCATGCTTCTGCAACAGGTCAATGTCTTaGAACAGAGATTCCTCATCATCTTGGAATCCCGAT | + |
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Preference number: 6 (lower is better) Translates to: MLIPCFCNRSMS*NRDSSSSWNPD Trigger: ATCGGGATTCCAAGATGATGAGGAATCTCTGTTTCAAGACATTGACCTGTTGCAGAAGCATGGGATTAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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| CDS CAA 72 bp | TCTTTAATCTTTTCCACTTTGGCTTCTGAGAGGCCTTaGACATTGCAGAGGGCTCTTCTTGTTGTCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLIFSTLASERP*TLQRALLVVIC Trigger: ACAAATGACAACAAGAAGAGCCCTCTGCAATGTCAAAGGCCTCTCAGAAGCCAAAGTGGAAAAGATTAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023065.8 ENSMUST00000229408.2 ENSMUST00000230011.2 |
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