RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DMAP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000009640

Ensembl transcript IDs: ENSMUST00000102687.4

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GCTGCGGCAGGGGCCCCCAGCACTCCTGCCCGAGCCAGGGCCTCGTaGCGGTGCCGCAGCATCTGTAGCTCATATTCACAGTTGGCACAG +
Preference number: 5 (lower is better)
Translates to: AAAGAPSTPARARAS*RCRSICSSYSQLAQ
Trigger: CTGTGCCAACTGTGAATATGAGCTACAGATGCTGCGGCACCGGCACGAGGCCCTGGCTCGGGCAGGAGTGCTGGGGGCCCCTGCCGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS GCA 90 bp GGGAGCCTTGCGTTCCGTGCGCCGCTGCTCTGCAGTGGTGTCTGCTaGTGTAATCAGCTTCTGCAGGTCTTGGCTGCGCTTCTCCCGCTC +
Preference number: 5 (lower is better)
Translates to: GSLAFRAPLLCSGVC*CNQLLQVLAALLPL
Trigger: GAGCGGGAGAAGCGCAGCCAAGACCTGCAGAAGCTGATTACAGCAGCAGACACCACTGCAGAGCAGCGGCGCACGGAACGCAAGGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS TCA 90 bp GGCTCAGCTCCACACCAAGTTCCAGCAGCATCTGTTCCAGCGCCTTaGTCTTCTTCTGACCCACAGAGCTGGGTAGCTTCATCCGCTGGC +
Preference number: 5 (lower is better)
Translates to: GSAPHQVPAASVPAP*SSSDPQSWVASSAG
Trigger: GCCAGCGGATGAAGCTACCCAGCTCTGTGGGTCAGAAGAAGATCAAGGCGCTGGAACAGATGCTGCTGGAACTTGGTGTGGAGCTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS TCA 90 bp GTTCCTTCCGCCGTCTCTCATGCCCAGCATCAAACACTGGTATCTTaGGATCTGTGCCTGGCACAGCCCTCACGTTGGCAAGCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: VPSAVSHAQHQTLVS*DLCLAQPSRWQAWH
Trigger: GTGCCAAGCTTGCCAACGTGAGGGCTGTGCCAGGCACAGATCTCAAGATACCAGTGTTTGATGCTGGGCATGAGAGACGGCGGAAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS TCA 90 bp ACACCAAGTTCCAGCAGCATCTGTTCCAGCGCCTTGATCTTCTTCTaGCCCACAGAGCTGGGTAGCTTCATCCGCTGGCTCCGTAGCGTG +
Preference number: 5 (lower is better)
Translates to: TPSSSSICSSALIFF*PTELGSFIRWLRSV
Trigger: CACGCTACGGAGCCAGCGGATGAAGCTACCCAGCTCTGTGGGTCAGAAGAAGATCAAGGCGCTGGAACAGATGCTGCTGGAACTTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS GCA 90 bp TTTTGGGGTAGCTTCTTCTTGGGAGCCTTGCGTTCCGTGCGCCGCTaGTCTGCAGTGGTGTCTGCTGCTGTAATCAGCTTCTGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: FWGSFFLGALRSVRR*SAVVSAAVISFCRS
Trigger: AGACCTGCAGAAGCTGATTACAGCAGCAGACACCACTGCAGAGCAGCGGCGCACGGAACGCAAGGCTCCCAAGAAGAAGCTACCCCAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CCA 90 bp CGCCGCTCGTCGCCAGTGGAAAAACATAGCGCCGTCCTTTCGAGCTaGGTTAGTAAAAGGCATCCATTTCCAAGGGCGAACCTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: RRSSPVEKHSAVLSS*VSKRHPFPRANLLG
Trigger: TCCAAGAAGGTTCGCCCTTGGAAATGGATGCCTTTTACTAACCCAGCTCGAAAGGACGGCGCTATGTTTTTCCACTGGCGACGAGCGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS TCA 90 bp AGTAAAGCAAAGCATAGACCTCCCGATGCATGCCCTCAGGCCTCTTaGAGGTCAGCGTCTCTGAGGACTTCTTGGACTTTTTCTTGTCCG +
Preference number: 5 (lower is better)
Translates to: SKAKHRPPDACPQAS*RSASLRTSWTFSCP
Trigger: CGGACAAGAAAAAGTCCAAGAAGTCCTCAGAGACGCTGACCTTCAAGAGGCCTGAGGGCATGCATCGGGAGGTCTATGCTTTGCTTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CCA 90 bp TCTCTCATGCCCAGCATCAAACACTGGTATCTTGAGATCTGTGCCTaGCACAGCCCTCACGTTGGCAAGCTTGGCACAAATGTGGTAGTA +
Preference number: 5 (lower is better)
Translates to: SLMPSIKHWYLEICA*HSPHVGKLGTNVVV
Trigger: TACTACCACATTTGTGCCAAGCTTGCCAACGTGAGGGCTGTGCCAGGCACAGATCTCAAGATACCAGTGTTTGATGCTGGGCATGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS TCA 90 bp TCCTCCACAGAACGCTTCTTGAACTGCTGGTGGTCATACCGATCGTaGATAACTACGAAGCGCAGATCAAATCGGCGGCTGAGGTCAAAT +
Preference number: 5 (lower is better)
Translates to: SSTERFLNCWWSYRS*ITTKRRSNRRLRSN
Trigger: ATTTGACCTCAGCCGCCGATTTGATCTGCGCTTCGTAGTTATTCACGATCGGTATGACCACCAGCAGTTCAAGAAGCGTTCTGTGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS GCA 72 bp GGGGCCCCCAGCACTCCTGCCCGAGCCAGGGCCTCGTaGCGGTGCCGCAGCATCTGTAGCTCATATTCACAG +
Preference number: 6 (lower is better)
Translates to: GAPSTPARARAS*RCRSICSSYSQ
Trigger: CTGTGAATATGAGCTACAGATGCTGCGGCACCGGCACGAGGCCCTGGCTCGGGCAGGAGTGCTGGGGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS GCA 72 bp GCGTTCCGTGCGCCGCTGCTCTGCAGTGGTGTCTGCTaGTGTAATCAGCTTCTGCAGGTCTTGGCTGCGCTT +
Preference number: 6 (lower is better)
Translates to: AFRAPLLCSGVC*CNQLLQVLAAL
Trigger: AAGCGCAGCCAAGACCTGCAGAAGCTGATTACAGCAGCAGACACCACTGCAGAGCAGCGGCGCACGGAACGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CCA 72 bp GGTGGGGTCCAGACCAAGTCCAGATTCAGACACTGTTaGCTCAGCAGAAGCCGGGGTTGGTCCCACTGCTGC +
Preference number: 6 (lower is better)
Translates to: GGVQTKSRFRHC*LSRSRGWSHCC
Trigger: GCAGCAGTGGGACCAACCCCGGCTTCTGCTGAGCCAACAGTGTCTGAATCTGGACTTGGTCTGGACCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CAA 90 bp TGGTATCCTTGGTGGGGTCCAGACCAAGTCCAGATTCAGACACTGTaGGCTCAGCAGAAGCCGGGGTTGGTCCCACTGCTGCTGCGGCAG +
Preference number: 6 (lower is better)
Translates to: WYPWWGPDQVQIQTL*AQQKPGLVPLLLRQ
Trigger: CTGCCGCAGCAGCAGTGGGACCAACCCCGGCTTCTGCTGAGCCAACAGTGTCTGAATCTGGACTTGGTCTGGACCCCACCAAGGATACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CAA 72 bp TGGTGGGGTCCAGACCAAGTCCAGATTCAGACACTGTaGGCTCAGCAGAAGCCGGGGTTGGTCCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: WWGPDQVQIQTL*AQQKPGLVPLL
Trigger: CAGCAGTGGGACCAACCCCGGCTTCTGCTGAGCCAACAGTGTCTGAATCTGGACTTGGTCTGGACCCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CAA 90 bp CGCTGGCTCCGTAGCGTGACACCTGCCGACTTAAAATCTGGAAACTaGATGCCTGCAGTCTCAGGGACAGCCGGCTTCTCAGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: RWLRSVTPADLKSGN*MPAVSGTAGFSASF
Trigger: GAAGGAGGCTGAGAAGCCGGCTGTCCCTGAGACTGCAGGCATCAAGTTTCCAGATTTTAAGTCGGCAGGTGTCACGCTACGGAGCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS GCA 72 bp AGCTTCTTCTTGGGAGCCTTGCGTTCCGTGCGCCGCTaGTCTGCAGTGGTGTCTGCTGCTGTAATCAGCTTC +
Preference number: 6 (lower is better)
Translates to: SFFLGALRSVRR*SAVVSAAVISF
Trigger: GAAGCTGATTACAGCAGCAGACACCACTGCAGAGCAGCGGCGCACGGAACGCAAGGCTCCCAAGAAGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS TCA 72 bp TCCAGCAGCATCTGTTCCAGCGCCTTGATCTTCTTCTaGCCCACAGAGCTGGGTAGCTTCATCCGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SSSICSSALIFF*PTELGSFIRWL
Trigger: GAGCCAGCGGATGAAGCTACCCAGCTCTGTGGGTCAGAAGAAGATCAAGGCGCTGGAACAGATGCTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CAA 72 bp CGCCGTCTCTCATGCCCAGCATCAAACACTGGTATCTaGAGATCTGTGCCTGGCACAGCCCTCACGTTGGCA +
Preference number: 6 (lower is better)
Translates to: RRLSCPASNTGI*RSVPGTALTLA
Trigger: TGCCAACGTGAGGGCTGTGCCAGGCACAGATCTCAAGATACCAGTGTTTGATGCTGGGCATGAGAGACGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CAA 90 bp TGTTCCTTCCGCCGTCTCTCATGCCCAGCATCAAACACTGGTATCTaGAGATCTGTGCCTGGCACAGCCCTCACGTTGGCAAGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: CSFRRLSCPASNTGI*RSVPGTALTLASLA
Trigger: TGCCAAGCTTGCCAACGTGAGGGCTGTGCCAGGCACAGATCTCAAGATACCAGTGTTTGATGCTGGGCATGAGAGACGGCGGAAGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CCA 72 bp TTCCTTCCGCCGTCTCTCATGCCCAGCATCAAACACTaGTATCTTGAGATCTGTGCCTGGCACAGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: FLPPSLMPSIKH*YLEICAWHSPH
Trigger: GTGAGGGCTGTGCCAGGCACAGATCTCAAGATACCAGTGTTTGATGCTGGGCATGAGAGACGGCGGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS TCA 72 bp CCACACCAAGTTCCAGCAGCATCTGTTCCAGCGCCTTaGTCTTCTTCTGACCCACAGAGCTGGGTAGCTTCA +
Preference number: 6 (lower is better)
Translates to: PHQVPAASVPAP*SSSDPQSWVAS
Trigger: TGAAGCTACCCAGCTCTGTGGGTCAGAAGAAGATCAAGGCGCTGGAACAGATGCTGCTGGAACTTGGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS GCA 72 bp GACACCTGCCGACTTAAAATCTGGAAACTTGATGCCTaGAGTCTCAGGGACAGCCGGCTTCTCAGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: DTCRLKIWKLDA*SLRDSRLLSLL
Trigger: AAGGAGGCTGAGAAGCCGGCTGTCCCTGAGACTGCAGGCATCAAGTTTCCAGATTTTAAGTCGGCAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CCA 72 bp GATCTGTGCCTGGCACAGCCCTCACGTTGGCAAGCTTaGCACAAATGTGGTAGTACCTCTCTTTCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: DLCLAQPSRWQA*HKCGSTSLSGP
Trigger: AGGACCTGAAAGAGAGGTACTACCACATTTGTGCCAAGCTTGCCAACGTGAGGGCTGTGCCAGGCACAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CAA 72 bp GTGAGGGGTGCACCCACGACATCAATGATGGTATCCTaGGTGGGGTCCAGACCAAGTCCAGATTCAGACACT +
Preference number: 6 (lower is better)
Translates to: VRGAPTTSMMVS*VGSRPSPDSDT
Trigger: AGTGTCTGAATCTGGACTTGGTCTGGACCCCACCAAGGATACCATCATTGATGTCGTGGGTGCACCCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CAA 90 bp GAATTGGGTGTGAGGGGTGCACCCACGACATCAATGATGGTATCCTaGGTGGGGTCCAGACCAAGTCCAGATTCAGACACTGTTGGCTCA +
Preference number: 6 (lower is better)
Translates to: ELGVRGAPTTSMMVS*VGSRPSPDSDTVGS
Trigger: TGAGCCAACAGTGTCTGAATCTGGACTTGGTCTGGACCCCACCAAGGATACCATCATTGATGTCGTGGGTGCACCCCTCACACCCAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS TCA 72 bp TCTGTAGCTCATATTCACAGTTGGCACAGGCCTGCTTaGGCTCGTAGAGTAACACCAGGTCGCTCCGCAACT +
Preference number: 6 (lower is better)
Translates to: SVAHIHSWHRPA*ARRVTPGRSAT
Trigger: AGTTGCGGAGCGACCTGGTGTTACTCTACGAGCTCAAGCAGGCCTGTGCCAACTGTGAATATGAGCTACAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CCA 72 bp CCCAGCATCAAACACTGGTATCTTGAGATCTGTGCCTaGCACAGCCCTCACGTTGGCAAGCTTGGCACAAAT +
Preference number: 6 (lower is better)
Translates to: PSIKHWYLEICA*HSPHVGKLGTN
Trigger: ATTTGTGCCAAGCTTGCCAACGTGAGGGCTGTGCCAGGCACAGATCTCAAGATACCAGTGTTTGATGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS TCA 72 bp GAACGCTTCTTGAACTGCTGGTGGTCATACCGATCGTaGATAACTACGAAGCGCAGATCAAATCGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: ERFLNCWWSYRS*ITTKRRSNRRL
Trigger: CAGCCGCCGATTTGATCTGCGCTTCGTAGTTATTCACGATCGGTATGACCACCAGCAGTTCAAGAAGCGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CCA 72 bp TCGCCAGTGGAAAAACATAGCGCCGTCCTTTCGAGCTaGGTTAGTAAAAGGCATCCATTTCCAAGGGCGAAC +
Preference number: 6 (lower is better)
Translates to: SPVEKHSAVLSS*VSKRHPFPRAN
Trigger: GTTCGCCCTTGGAAATGGATGCCTTTTACTAACCCAGCTCGAAAGGACGGCGCTATGTTTTTCCACTGGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4
CDS CAA 72 bp TTAGTAAAAGGCATCCATTTCCAAGGGCGAACCTTCTaGGACCCCAGTTTCGCCTTCACTGTCCGATACCCC +
Preference number: 6 (lower is better)
Translates to: LVKGIHFQGRTF*DPSFAFTVRYP
Trigger: GGGGTATCGGACAGTGAAGGCGAAACTGGGGTCCAAGAAGGTTCGCCCTTGGAAATGGATGCCTTTTACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102687.4