Pregenerated sensors for DMAC2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054894Ensembl transcript IDs: ENSMUST00000021372.6, ENSMUST00000220460.2, ENSMUST00000220916.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATAGCAAAATTAGAATCTAACAAACACACATTCTTGTTTGAAGCAGATGGGGAGAGCAATGCAGGAGCTTaGGCAAGTATGCAAATCCCG | + |
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Preference number: 2 (lower is better) Translates to: IAKLESNKHTFLFEADGESNAGA*ASMQIP Trigger: CGGGATTTGCATACTTGCTCAAGCTCCTGCATTGCT...CTCCCCATCTGCTTCAAACAAGAATGTGTGTTTGTTAGATTCTAATTTTGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGCAAAATTAGAATCTAACAAACACACATTCTTGTTTGAAGCAGATGGGGAGGTGAGTCAGTACCTGTaGTTTCAGGTTTCAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: IAKLESNKHTFLFEADGEVSQYL*FQVSEL Trigger: CAGTTCTGAAACCTGAAAGCACAGGTACTGACTCAC...CTCCCCATCTGCTTCAAACAAGAATGTGTGTTTGTTAGATTCTAATTTTGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGCAAAATTAGAATCTAACAAACACACATTCTTGTTTGAAGCAGATGGGGAGCTAGGAATGCAGCAATaGAGGAGCTTGAGCAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: IAKLESNKHTFLFEADGELGMQQ*RSLSKY Trigger: ATACTTGCTCAAGCTCCTGCATTGCTGCATTCCTAG...CTCCCCATCTGCTTCAAACAAGAATGTGTGTTTGTTAGATTCTAATTTTGCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| 3UTR GCA 72 bp | ACTAGGAATGCAGCAATGCAGGAGCTTGAGCAAGTATaGAAATCCCGGGAAGCCATACAGCCCGCAGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: TRNAAMQELEQV*KSREAIQPAAL Trigger: GAGAGCTGCGGGCTGTATGGCTTCCCGGGATTTGCATACTTGCTCAAGCTCCTGCATTGCTGCATTCCTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR TCA 90 bp | CTTCCTGACATCCATTCTCCATTTCTGAATCATTTTCACAGTTCTATTGGTGACCAGGGCCAACATCCCTaGGGCGTTCATAATCTACTT | + |
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Preference number: 4 (lower is better) Translates to: LPDIHSPFLNHFHSSIGDQGQHP*GVHNLL Trigger: AAGTAGATTATGAACGCCTCAGGGATGTTGGCCCTG...GTCACCAATAGAACTGTGAAAATGATTCAGAAATGGAGAATGGATGTCAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR TCA 90 bp | ATAGCAAAATTAGAATCTAACAAACACACATTCTTGTTTGAAGCAGATGGGGAGTCTAGGCCCACCATGTaGTCCAAGCCAATGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: IAKLESNKHTFLFEADGESRPTM*SKPMSM Trigger: CATGGACATTGGCTTGGATCACATGGTGGGCCTAGA...CTCCCCATCTGCTTCAAACAAGAATGTGTGTTTGTTAGATTCTAATTTTGCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR GCA 90 bp | CTTCCTGACATCCATTCTCCATTTCTGAATCATTTTCACAGTTCTATTGGTGACTTCCAGAGAAGGCAGTaGTGTCTTAAAGACTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LPDIHSPFLNHFHSSIGDFQRRQ*CLKDLG Trigger: GCCCAAGTCTTTAAGACAGCACTGCCTTCTCTGGAA...GTCACCAATAGAACTGTGAAAATGATTCAGAAATGGAGAATGGATGTCAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR GCA 90 bp | ATAGCAAAATTAGAATCTAACAAACACACATTCTTGTTTGAAGCAGATGGGGAGTTCCAGAGAAGGCAGTaGTGTCTTAAAGACTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IAKLESNKHTFLFEADGEFQRRQ*CLKDLG Trigger: GCCCAAGTCTTTAAGACAGCACTGCCTTCTCTGGAA...CTCCCCATCTGCTTCAAACAAGAATGTGTGTTTGTTAGATTCTAATTTTGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR GCA 90 bp | CTTCCTGACATCCATTCTCCATTTCTGAATCATTTTCACAGTTCTATTGGTGACATCGGTGGCATCAATTaGTTGAATCTTGTATCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LPDIHSPFLNHFHSSIGDIGGIN*LNLVSV Trigger: GACAGATACAAGATTCAAGCAATTGATGCCACCGAT...GTCACCAATAGAACTGTGAAAATGATTCAGAAATGGAGAATGGATGTCAGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR CCA 90 bp | CTTCCTGACATCCATTCTCCATTTCTGAATCATTTTCACAGTTCTATTGGTGACGCTGTCTTAAAGACTTaGGCAAGGTATTCTTTATCT | + |
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Preference number: 4 (lower is better) Translates to: LPDIHSPFLNHFHSSIGDAVLKT*ARYSLS Trigger: AGATAAAGAATACCTTGCCCAAGTCTTTAAGACAGC...GTCACCAATAGAACTGTGAAAATGATTCAGAAATGGAGAATGGATGTCAGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR GCA 90 bp | ATAGCAAAATTAGAATCTAACAAACACACATTCTTGTTTGAAGCAGATGGGGAGATCGGTGGCATCAATTaGTTGAATCTTGTATCTGTC | + |
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Preference number: 4 (lower is better) Translates to: IAKLESNKHTFLFEADGEIGGIN*LNLVSV Trigger: GACAGATACAAGATTCAAGCAATTGATGCCACCGAT...CTCCCCATCTGCTTCAAACAAGAATGTGTGTTTGTTAGATTCTAATTTTGCTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR TCA 90 bp | ATAGCAAAATTAGAATCTAACAAACACACATTCTTGTTTGAAGCAGATGGGGAGGTGGCATCAATTGCTTaGATCTTGTATCTGTCTATA | + |
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Preference number: 4 (lower is better) Translates to: IAKLESNKHTFLFEADGEVASIA*ILYLSI Trigger: TATAGACAGATACAAGATTCAAGCAATTGATGCCAC...CTCCCCATCTGCTTCAAACAAGAATGTGTGTTTGTTAGATTCTAATTTTGCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR TCA 90 bp | AGTTATTCTCTTCCTGACATCCATTCTCCATTTCTGAATCATTTTCACAGTTCTGTGGCATCAATTGCTTaGATCTTGTATCTGTCTATA | + |
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Preference number: 4 (lower is better) Translates to: SYSLPDIHSPFLNHFHSSVASIA*ILYLSI Trigger: TATAGACAGATACAAGATTCAAGCAATTGATGCCAC...AGAACTGTGAAAATGATTCAGAAATGGAGAATGGATGTCAGGAAGAGAATAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR GCA 90 bp | ATAGCAAAATTAGAATCTAACAAACACACATTCTTGTTTGAAGCAGATGGGGAGGGATTTTCTTTAAGCTaGAGAGCTGTCTCGAAATTT | + |
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Preference number: 4 (lower is better) Translates to: IAKLESNKHTFLFEADGEGFSLS*RAVSKF Trigger: AAATTTCGAGACAGCTCTGCAGCTTAAAGAAAATCC...CTCCCCATCTGCTTCAAACAAGAATGTGTGTTTGTTAGATTCTAATTTTGCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR CCA 90 bp | ATAGCAAAATTAGAATCTAACAAACACACATTCTTGTTTGAAGCAGATGGGGAGGCTGTCTTAAAGACTTaGGCAAGGTATTCTTTATCT | + |
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Preference number: 4 (lower is better) Translates to: IAKLESNKHTFLFEADGEAVLKT*ARYSLS Trigger: AGATAAAGAATACCTTGCCCAAGTCTTTAAGACAGC...CTCCCCATCTGCTTCAAACAAGAATGTGTGTTTGTTAGATTCTAATTTTGCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS CCA 90 bp | TGTTATAGTCGTGTAGCCACTTCTGGTGGCCACAGTAGCGTACTTTaGCTCCACACCGAAGTAGCCACTCAGATGCTGCCCTGTCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: CYSRVATSGGHSSVL*LHTEVATQMLPCQG Trigger: GCCCTGACAGGGCAGCATCTGAGTGGCTACTTCGGTGTGGAGCCAAAGTACGCTACTGTGGCCACCAGAAGTGGCTACACGACTATAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021372.6 ENSMUST00000220460.2 ENSMUST00000220916.2 |
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| CDS TCA 90 bp | TTTCAACATGCTCTAGGCCCACCATGTGATCCAAGCCAATGTCCATaGTACAAGAATCGGTGGCATCAATTGCTTGAATCTTGTATCTGT | + |
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Preference number: 5 (lower is better) Translates to: FQHALGPPCDPSQCP*YKNRWHQLLESCIC Trigger: ACAGATACAAGATTCAAGCAATTGATGCCACCGATTCTTGTATCATGGACATTGGCTTGGATCACATGGTGGGCCTAGAGCATGTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021372.6 ENSMUST00000220460.2 ENSMUST00000220916.2 |
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| CDS-3UTR CAA 90 bp | CTTCCTGACATCCATTCTCCATTTCTGAATCATTTTCACAGTTCTATTGGTGACGGTGGCATCAATTGCTaGAATCTTGTATCTGTCTAT | + |
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Preference number: 5 (lower is better) Translates to: LPDIHSPFLNHFHSSIGDGGINC*NLVSVY Trigger: ATAGACAGATACAAGATTCAAGCAATTGATGCCACC...GTCACCAATAGAACTGTGAAAATGATTCAGAAATGGAGAATGGATGTCAGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR CAA 90 bp | CTTCCTGACATCCATTCTCCATTTCTGAATCATTTTCACAGTTCTATTGGTGACAATCGGTGGCATCAATaGCTTGAATCTTGTATCTGT | + |
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Preference number: 5 (lower is better) Translates to: LPDIHSPFLNHFHSSIGDNRWHQ*LESCIC Trigger: ACAGATACAAGATTCAAGCAATTGATGCCACCGATT...GTCACCAATAGAACTGTGAAAATGATTCAGAAATGGAGAATGGATGTCAGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS CCA 90 bp | AGGTTTAATTTTAGTTCCAGAGAAGGCAGTGCTGTCTTAAAGACTTaGGCAAGGTATTCTTTATCTTTTACTCCAGGAAGATCACTTAAG | + |
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Preference number: 5 (lower is better) Translates to: RFNFSSREGSAVLKT*ARYSLSFTPGRSLK Trigger: CTTAAGTGATCTTCCTGGAGTAAAAGATAAAGAATACCTTGCCCAAGTCTTTAAGACAGCACTGCCTTCTCTGGAACTAAAATTAAACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR CAA 90 bp | AGTTATTCTCTTCCTGACATCCATTCTCCATTTCTGAATCATTTTCACAGTTCTGGTGGCATCAATTGCTaGAATCTTGTATCTGTCTAT | + |
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Preference number: 5 (lower is better) Translates to: SYSLPDIHSPFLNHFHSSGGINC*NLVSVY Trigger: ATAGACAGATACAAGATTCAAGCAATTGATGCCACC...AGAACTGTGAAAATGATTCAGAAATGGAGAATGGATGTCAGGAAGAGAATAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR CAA 90 bp | AGTTATTCTCTTCCTGACATCCATTCTCCATTTCTGAATCATTTTCACAGTTCTAATCGGTGGCATCAATaGCTTGAATCTTGTATCTGT | + |
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Preference number: 5 (lower is better) Translates to: SYSLPDIHSPFLNHFHSSNRWHQ*LESCIC Trigger: ACAGATACAAGATTCAAGCAATTGATGCCACCGATT...AGAACTGTGAAAATGATTCAGAAATGGAGAATGGATGTCAGGAAGAGAATAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS-3UTR CAA 90 bp | AGTTATTCTCTTCCTGACATCCATTCTCCATTTCTGAATCATTTTCACAGTTCTTGCTGTCTTAAAGACTaGGGCAAGGTATTCTTTATC | + |
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Preference number: 5 (lower is better) Translates to: SYSLPDIHSPFLNHFHSSCCLKD*GKVFFI Trigger: GATAAAGAATACCTTGCCCAAGTCTTTAAGACAGCA...AGAACTGTGAAAATGATTCAGAAATGGAGAATGGATGTCAGGAAGAGAATAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS TCA 72 bp | GCTCTAGGCCCACCATGTGATCCAAGCCAATGTCCATaGTACAAGAATCGGTGGCATCAATTGCTTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: ALGPPCDPSQCP*YKNRWHQLLES Trigger: AGATTCAAGCAATTGATGCCACCGATTCTTGTATCATGGACATTGGCTTGGATCACATGGTGGGCCTAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021372.6 ENSMUST00000220460.2 ENSMUST00000220916.2 |
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| CDS GCA 72 bp | GCCAATGTCCATGATACAAGAATCGGTGGCATCAATTaGTTGAATCTTGTATCTGTCTATAGAGCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ANVHDTRIGGIN*LNLVSVYRASW Trigger: CCAGGAAGCTCTATAGACAGATACAAGATTCAAGCAATTGATGCCACCGATTCTTGTATCATGGACATTGGC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021372.6 ENSMUST00000220460.2 ENSMUST00000220916.2 |
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| CDS TCA 72 bp | ATGTCCATGATACAAGAATCGGTGGCATCAATTGCTTaGATCTTGTATCTGTCTATAGAGCTTCCTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: MSMIQESVASIA*ILYLSIELPGS Trigger: ACTCCCAGGAAGCTCTATAGACAGATACAAGATTCAAGCAATTGATGCCACCGATTCTTGTATCATGGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021372.6 ENSMUST00000220460.2 ENSMUST00000220916.2 |
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| CDS CAA 72 bp | AATGTCCATGATACAAGAATCGGTGGCATCAATTGCTaGAATCTTGTATCTGTCTATAGAGCTTCCTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: NVHDTRIGGINC*NLVSVYRASWE Trigger: CTCCCAGGAAGCTCTATAGACAGATACAAGATTCAAGCAATTGATGCCACCGATTCTTGTATCATGGACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021372.6 ENSMUST00000220460.2 ENSMUST00000220916.2 |
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| CDS CAA 72 bp | TCTTTTACTCCAGGAAGATCACTTAAGAACAAATACTaGAGGTTCCTGAAATGTCGCAGAGCAATGACGCCA | + |
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Preference number: 6 (lower is better) Translates to: SFTPGRSLKNKY*RFLKCRRAMTP Trigger: TGGCGTCATTGCTCTGCGACATTTCAGGAACCTCAAGTATTTGTTCTTAAGTGATCTTCCTGGAGTAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS GCA 72 bp | ATCTGGAGTCACATGACCATGGGATTTTCTTTAAGCTaGAGAGCTGTCTCGAAATTTTTCCAAACATCATCA | + |
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Preference number: 6 (lower is better) Translates to: IWSHMTMGFSLS*RAVSKFFQTSS Trigger: TGATGATGTTTGGAAAAATTTCGAGACAGCTCTGCAGCTTAAAGAAAATCCCATGGTCATGTGACTCCAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021372.6 ENSMUST00000220460.2 ENSMUST00000220916.2 |
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| CDS CCA 72 bp | TTTAGTTCCAGAGAAGGCAGTGCTGTCTTAAAGACTTaGGCAAGGTATTCTTTATCTTTTACTCCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: FSSREGSAVLKT*ARYSLSFTPGR Trigger: TCTTCCTGGAGTAAAAGATAAAGAATACCTTGCCCAAGTCTTTAAGACAGCACTGCCTTCTCTGGAACTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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| CDS CAA 90 bp | TATTCTTTATCTTTTACTCCAGGAAGATCACTTAAGAACAAATACTaGAGGTTCCTGAAATGTCGCAGAGCAATGACGCCATTGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: YSLSFTPGRSLKNKY*RFLKCRRAMTPLSV Trigger: CACAGACAATGGCGTCATTGCTCTGCGACATTTCAGGAACCTCAAGTATTTGTTCTTAAGTGATCTTCCTGGAGTAAAAGATAAAGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021372.6 ENSMUST00000220916.2 |
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