Pregenerated sensors for DMAC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057229Ensembl transcript IDs: ENSMUST00000077338.12, ENSMUST00000085953.5, ENSMUST00000126925.8
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGCCAGGATCAATCACAGTTGATAGGAGTGCCAGGGGAAGCTGCTaGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTGCCCTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: APGSITVDRSARGSC*PPNSLGAGQVLPSL Trigger: CAGGGAGGGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTGTGATTGATCCTGGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR CCA 90 bp | CAGTTGATAGGAGTGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTaGGTGCTGGGCAAGTGCTGCCCTCCCTGCTACACTCTAAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: QLIGVPGEAAGHPTA*VLGKCCPPCYTLKS Trigger: GGACTTTAGAGTGTAGCAGGGAGGGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR GCA 90 bp | GAAACGGTGGAGCCGCATGCAGCTGTCACAGCATGGAGGGCTGTCTaGCCAGGCAACAGATGTTTGCCAGTTGCAGGCTGCAGTCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: ETVEPHAAVTAWRAV*PGNRCLPVAGCSQP Trigger: TGGCTGACTGCAGCCTGCAACTGGCAAACATCTGTTGCCTGGGCAGACAGCCCTCCATGCTGTGACAGCTGCATGCGGCTCCACCGTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR GCA 90 bp | GCTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTGCCCTCCCTaGTACACTCTAAAGTCCCCGCACAGGTCTCTTTACTTTGGATTC | + |
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Preference number: 1 (lower is better) Translates to: AGHPTAWVLGKCCPP*YTLKSPHRSLYFGF Trigger: GAATCCAAAGTAAAGAGACCTGTGCGGGGACTTTAGAGTGTAGCAGGGAGGGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR TCA 90 bp | AGTCCGTGTAGGCCAGCAGTGTCTCATGTCAGCCACAGTTCCTGCTaGTGTGTATGGGCAGAGTTTGGGGGAAACGGTGGAGCCGCATGC | + |
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Preference number: 1 (lower is better) Translates to: SPCRPAVSHVSHSSC*CVWAEFGGNGGAAC Trigger: GCATGCGGCTCCACCGTTTCCCCCAAACTCTGCCCATACACATCAGCAGGAACTGTGGCTGACATGAGACACTGCTGGCCTACACGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR GCA 90 bp | TGGAGGGCTGTCTGCCCAGGCAACAGATGTTTGCCAGTTGCAGGCTaGAGTCAGCCAGTCCTGACTCAGTCTTCTTATCTTCCCATGCTG | + |
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Preference number: 1 (lower is better) Translates to: WRAVCPGNRCLPVAG*SQPVLTQSSYLPML Trigger: CAGCATGGGAAGATAAGAAGACTGAGTCAGGACTGGCTGACTGCAGCCTGCAACTGGCAAACATCTGTTGCCTGGGCAGACAGCCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR TCA 90 bp | AGGAAATGGCTACGGTTATTTGGCCGGATCCATTCCTCCTTGTCCTaGAACTTCACTGCGCCTCCCTGCTTCAGGATGAAGACAGCACCT | + |
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Preference number: 1 (lower is better) Translates to: RKWLRLFGRIHSSLS*NFTAPPCFRMKTAP Trigger: AGGTGCTGTCTTCATCCTGAAGCAGGGAGGCGCAGTGAAGTTTCAGGACAAGGAGGAATGGATCCGGCCAAATAACCGTAGCCATTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| 3UTR TCA 90 bp | GCCAGTCCTGACTCAGTCTTCTTATCTTCCCATGCTGCTCCGTGCTaGATGAGCTACACCAGAAGCCAGACTGTGAGAAGACTTCAGACT | + |
|
Preference number: 1 (lower is better) Translates to: ASPDSVFLSSHAAPC*MSYTRSQTVRRLQT Trigger: AGTCTGAAGTCTTCTCACAGTCTGGCTTCTGGTGTAGCTCATTCAGCACGGAGCAGCATGGGAAGATAAGAAGACTGAGTCAGGACTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR TCA 90 bp | ATTCCTCCTTGTCCTGAAACTTCACTGCGCCTCCCTGCTTCAGGATaGAGACAGCACCTGCAACATACGGGCCATATTTCTCCTGGATGT | + |
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Preference number: 1 (lower is better) Translates to: IPPCPETSLRLPASG*RQHLQHTGHISPGC Trigger: ACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTGAAGCAGGGAGGCGCAGTGAAGTTTCAGGACAAGGAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTGGGCAAGTGCTGCCCTCCCTGCTACACTCTAAAGTCCCCGCACAGGTCCCAGAAGCCAGACTGTaGGAAGACTTCAGACTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GAGQVLPSLLHSKVPAQVPEARL*EDFRLS Trigger: GGAGAGTCTGAAGTCTTCTCACAGTCTGGCTTCTGG...GACCTGTGCGGGGACTTTAGAGTGTAGCAGGGAGGGCAGCACTTGCCCAGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR CAA 90 bp | GCAGCTGTCACAGCATGGAGGGCTGTCTGCCCAGGCAACAGATGTTaGCCAGTTGCAGGCTGCAGTCAGCCAGTCCTGACTCAGTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: AAVTAWRAVCPGNRC*PVAGCSQPVLTQSS Trigger: AGAAGACTGAGTCAGGACTGGCTGACTGCAGCCTGCAACTGGCAAACATCTGTTGCCTGGGCAGACAGCCCTCCATGCTGTGACAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR CCA 90 bp | ACTCTAAAGTCCCCGCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGGCAGCTGTCACAGCATaGAGGGCTGTCTGCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: TLKSPHRSLYFGFSPAVVAAVTA*RAVCPG Trigger: GCCTGGGCAGACAGCCCTCCATGCTGTGACAGCTGC...CACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGACTTTAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR CCA 90 bp | TTTCCACAGTGTATTGGGTTCATGACAGAGCCACCGGAAACATGGGCGCCAGGACAACAGCCTGGGTGCTaGGCAAGTGCTGCCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: FPQCIGFMTEPPETWAPGQQPGC*ASAALP Trigger: AGGGAGGGCAGCACTTGCCCAGCACCCAGGCTGTTG...TCCTGGCGCCCATGTTTCCGGTGGCTCTGTCATGAACCCAATACACTGTGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR TCA 90 bp | CACAGCATGGAGGGCTGTCTGCCCAGGCAACAGATGTTTGCCAGTTGCAGGCTGCCAGAAGCCAGACTGTaGGAAGACTTCAGACTCTCC | + |
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Preference number: 2 (lower is better) Translates to: HSMEGCLPRQQMFASCRLPEARL*EDFRLS Trigger: GGAGAGTCTGAAGTCTTCTCACAGTCTGGCTTCTGG...CAGCCTGCAACTGGCAAACATCTGTTGCCTGGGCAGACAGCCCTCCATGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR CCA 90 bp | TCCCCGCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGCCAGAAAGAGTTTGGGGGAAACGGTaGAGCCGCATGCAGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: SPHRSLYFGFSPAVVPERVWGKR*SRMQLS Trigger: TGACAGCTGCATGCGGCTCCACCGTTTCCCCCAAAC...TCTTTCTGGCACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR GCA 90 bp | GCCACTGGCATCCACAGCCTCCACAGGCACATTCTGGAACTTCTGAATCTCGGCTTCACTGCGCCTCCCTaGTTCAGGATGAAGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: ATGIHSLHRHILELLNLGFTAPP*FRMKTA Trigger: TGCTGTCTTCATCCTGAAGCAGGGAGGCGCAGTGAA...GCCGAGATTCAGAAGTTCCAGAATGTGCCTGTGGAGGCTGTGGATGCCAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| 3UTR-3UTR GCA 90 bp | GCCACTGGCATCCACAGCCTCCACAGGCACATTCTGGAACTTCTGAATCTCGGCGTCCTGAAACTTCACTaGGCCTCCCTGCTTCAGGAT | + |
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Preference number: 2 (lower is better) Translates to: ATGIHSLHRHILELLNLGVLKLH*ASLLQD Trigger: ATCCTGAAGCAGGGAGGCGCAGTGAAGTTTCAGGAC...GCCGAGATTCAGAAGTTCCAGAATGTGCCTGTGGAGGCTGTGGATGCCAGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| 3UTR-3UTR TCA 90 bp | TCACAGTTGATAGGAGTGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTGGGTGTGGGACTCCCACATTTaGAGGTGCTCATCAGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: SQLIGVPGEAAGHPTAWVWDSHI*RCSSVN Trigger: ATTTACTGATGAGCACCTTCAAATGTGGGAGTCCCA...CACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR TCA 90 bp | CGCCAGGATCAATCACAGTTGATAGGAGTGCCAGGGGAAGCTGCTGGCCACCCATGGGACTCCCACATTTaGAGGTGCTCATCAGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: RQDQSQLIGVPGEAAGHPWDSHI*RCSSVN Trigger: ATTTACTGATGAGCACCTTCAAATGTGGGAGTCCCA...TGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTGTGATTGATCCTGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR CCA 90 bp | GCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGCCAGAAAGAGAATAGTTTGGGGGAAACGGTaGAGCCGCATGCAGCTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: AQVSLLWILSGGRARKRIVWGKR*SRMQLS Trigger: TGACAGCTGCATGCGGCTCCACCGTTTCCCCCAAAC...TATTCTCTTTCTGGCACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR GCA 90 bp | GCCACTGGCATCCACAGCCTCCACAGGCACATTCTGGAACTTCTGAATCTCGGCGATGAAGACAGCACCTaGAACATACGGGCCATATTT | + |
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Preference number: 2 (lower is better) Translates to: ATGIHSLHRHILELLNLGDEDST*NIRAIF Trigger: AAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATC...GCCGAGATTCAGAAGTTCCAGAATGTGCCTGTGGAGGCTGTGGATGCCAGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCCGCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGCCAGAAAGATCATCAGTAAATCAATaGGTAATGCCATGGGGCTCG | + |
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Preference number: 2 (lower is better) Translates to: SPHRSLYFGFSPAVVPERSSVNQ*VMPWGS Trigger: CGAGCCCCATGGCATTACCCATTGATTTACTGATGA...TCTTTCTGGCACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR GCA 72 bp | GCTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTaGCCTCCCTGCTACACTCTAAAGTCCCCGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: AGHPTAWVLGKC*PPCYTLKSPHR Trigger: CCTGTGCGGGGACTTTAGAGTGTAGCAGGGAGGGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR GCA 72 bp | GCTGCTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTaGTGCCCTCCCTGCTACACTCTAAAGTCCCCGCAC | + |
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Preference number: 3 (lower is better) Translates to: AAGHPTAWVLGK*CPPCYTLKSPH Trigger: GTGCGGGGACTTTAGAGTGTAGCAGGGAGGGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTGCCCCAGGCAACAGATGTTaGCCAGTTGCAGGCTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: CQGKLLATQQPGCWASAAPGNRC*PVAGCS Trigger: ACTGCAGCCTGCAACTGGCAAACATCTGTTGCCTGG...GGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR GCA 72 bp | GTATGGGCAGAGTTTGGGGGAAACGGTGGAGCCGCATaGAGCTGTCACAGCATGGAGGGCTGTCTGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: VWAEFGGNGGAA*SCHSMEGCLPR Trigger: CCTGGGCAGACAGCCCTCCATGCTGTGACAGCTGCATGCGGCTCCACCGTTTCCCCCAAACTCTGCCCATAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR CAA 90 bp | CATCTCCATCTGGGGGTGGGGTGGGCGGACACACTGGGACTCCCACATTTGAAGGTGTATGGGCAGAGTTaGGGGGAAACGGTGGAGCCG | + |
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Preference number: 3 (lower is better) Translates to: HLHLGVGWADTLGLPHLKVYGQS*GETVEP Trigger: CGGCTCCACCGTTTCCCCCAAACTCTGCCCATACAC...CTTCAAATGTGGGAGTCCCAGTGTGTCCGCCCACCCCACCCCCAGATGGAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR CCA 72 bp | GGGGAAACGGTGGAGCCGCATGCAGCTGTCACAGCATaGAGGGCTGTCTGCCCAGGCAACAGATGTTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: GETVEPHAAVTA*RAVCPGNRCLP Trigger: TGGCAAACATCTGTTGCCTGGGCAGACAGCCCTCCATGCTGTGACAGCTGCATGCGGCTCCACCGTTTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR GCA 72 bp | GGATCAATCACAGTTGATAGGAGTGCCAGGGGAAGCTaGTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: GSITVDRSARGS*WPPNSLGAGQV Trigger: CACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTGTGATTGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR CCA 72 bp | CTGCTGATGTGTATGGGCAGAGTTTGGGGGAAACGGTaGAGCCGCATGCAGCTGTCACAGCATGGAGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LLMCMGRVWGKR*SRMQLSQHGGL Trigger: CAGCCCTCCATGCTGTGACAGCTGCATGCGGCTCCACCGTTTCCCCCAAACTCTGCCCATACACATCAGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR CCA 72 bp | TCAATCACAGTTGATAGGAGTGCCAGGGGAAGCTGCTaGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SITVDRSARGSC*PPNSLGAGQVL Trigger: CAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTGTGATTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGATGTGTATGGGCAGAGTTTGGGGGAAACGGTGGAGCCGCATGCAGCTGTCCCAGGCAACAGATGTTaGCCAGTTGCAGGCTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: ADVYGQSLGETVEPHAAVPGNRC*PVAGCS Trigger: ACTGCAGCCTGCAACTGGCAAACATCTGTTGCCTGG...GACAGCTGCATGCGGCTCCACCGTTTCCCCCAAACTCTGCCCATACACATCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR-3UTR CAA 90 bp | TCCCCGCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGCCAGAAAGAGTGTATGGGCAGAGTTaGGGGGAAACGGTGGAGCCG | + |
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Preference number: 3 (lower is better) Translates to: SPHRSLYFGFSPAVVPERVYGQS*GETVEP Trigger: CGGCTCCACCGTTTCCCCCAAACTCTGCCCATACAC...TCTTTCTGGCACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR TCA 72 bp | AGGCCAGCAGTGTCTCATGTCAGCCACAGTTCCTGCTaGTGTGTATGGGCAGAGTTTGGGGGAAACGGTGGA | + |
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Preference number: 3 (lower is better) Translates to: RPAVSHVSHSSC*CVWAEFGGNGG Trigger: TCCACCGTTTCCCCCAAACTCTGCCCATACACATCAGCAGGAACTGTGGCTGACATGAGACACTGCTGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR TCA 72 bp | GATGTTTGCCAGTTGCAGGCTGCAGTCAGCCAGTCCTaGCTCAGTCTTCTTATCTTCCCATGCTGCTCCGTG | + |
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Preference number: 3 (lower is better) Translates to: DVCQLQAAVSQS*LSLLIFPCCSV Trigger: CACGGAGCAGCATGGGAAGATAAGAAGACTGAGTCAGGACTGGCTGACTGCAGCCTGCAACTGGCAAACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR TCA 72 bp | CTACGGTTATTTGGCCGGATCCATTCCTCCTTGTCCTaGAACTTCACTGCGCCTCCCTGCTTCAGGATGAAG | + |
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Preference number: 3 (lower is better) Translates to: LRLFGRIHSSLS*NFTAPPCFRMK Trigger: CTTCATCCTGAAGCAGGGAGGCGCAGTGAAGTTTCAGGACAAGGAGGAATGGATCCGGCCAAATAACCGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| 3UTR TCA 72 bp | GCATCCACAGCCTCCACAGGCACATTCTGGAACTTCTaGATCTCGGCGAGGAAATGGCTACGGTTATTTGGC | + |
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Preference number: 3 (lower is better) Translates to: ASTASTGTFWNF*ISARKWLRLFG Trigger: GCCAAATAACCGTAGCCATTTCCTCGCCGAGATTCAGAAGTTCCAGAATGTGCCTGTGGAGGCTGTGGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| 3UTR GCA 72 bp | GTCTGCCCAGGCAACAGATGTTTGCCAGTTGCAGGCTaGAGTCAGCCAGTCCTGACTCAGTCTTCTTATCTT | + |
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Preference number: 3 (lower is better) Translates to: VCPGNRCLPVAG*SQPVLTQSSYL Trigger: AAGATAAGAAGACTGAGTCAGGACTGGCTGACTGCAGCCTGCAACTGGCAAACATCTGTTGCCTGGGCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR GCA 72 bp | CACTGCGCCTCCCTGCTTCAGGATGAAGACAGCACCTaGAACATACGGGCCATATTTCTCCTGGATGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: HCASLLQDEDST*NIRAIFLLDVS Trigger: ACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTGAAGCAGGGAGGCGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| 3UTR TCA 72 bp | TGTCCTGAAACTTCACTGCGCCTCCCTGCTTCAGGATaGAGACAGCACCTGCAACATACGGGCCATATTTCT | + |
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Preference number: 3 (lower is better) Translates to: CPETSLRLPASG*RQHLQHTGHIS Trigger: AGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTGAAGCAGGGAGGCGCAGTGAAGTTTCAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| 3UTR TCA 72 bp | GACTCAGTCTTCTTATCTTCCCATGCTGCTCCGTGCTaGATGAGCTACACCAGAAGCCAGACTGTGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: DSVFLSSHAAPC*MSYTRSQTVRR Trigger: TCTTCTCACAGTCTGGCTTCTGGTGTAGCTCATTCAGCACGGAGCAGCATGGGAAGATAAGAAGACTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR CCA 72 bp | CTACACTCTAAAGTCCCCGCACAGGTCTCTTTACTTTaGATTCTCTCCGGCGGTCGTGCCAGAAAGAGAATA | + |
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Preference number: 3 (lower is better) Translates to: LHSKVPAQVSLL*ILSGGRARKRI Trigger: TATTCTCTTTCTGGCACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGACTTTAGAGTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| 3UTR GCA 72 bp | ACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTaGCAGAAAGAGAATATTTTCTCAAATACTCATCTC | + |
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Preference number: 3 (lower is better) Translates to: TGLFTLDSLRRS*QKENIFSNTHL Trigger: GAGATGAGTATTTGAGAAAATATTCTCTTTCTGGCACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS-3UTR TCA 90 bp | TGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTGCCGGCAAGGCCCCGTTCTaGGATTCTGGGGCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: CQGKLLATQQPGCWASAAGKAPF*DSGAAS Trigger: GCTGGCTGCCCCAGAATCTCAGAACGGGGCCTTGCC...GGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS-3UTR CCA 90 bp | TGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTGCCACCAGTCGTCCAGGTTaGGGCAGCGCTGCAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: CQGKLLATQQPGCWASAATSRPG*GSAAGT Trigger: TGTCCCTGCAGCGCTGCCCCAACCTGGACGACTGGT...GGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS-3UTR CCA 90 bp | TGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTGCCAGCCTGCGGAGGTTCTaGAGGTGGTGGAGGCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: CQGKLLATQQPGCWASAASLRRF*RWWRQA Trigger: TGCCTGCCTCCACCACCTCCAGAACCTCCGCAGGCT...GGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS-3UTR GCA 90 bp | TGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTGCCGCCAGCGAGAGCTCCTaGAGTGAGCCAGCCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQGKLLATQQPGCWASAAASESS*SEPANR Trigger: CCTATTGGCTGGCTCACTGCAGGAGCTCTCGCTGGC...GGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | CATCTCCATCTGGGGGTGGGGTGGGCGGACACACTGGGACTCCCACATTTGAAGAGGTTGGGGCAGCGCTaGAGGGACAGGGACCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLHLGVGWADTLGLPHLKRLGQR*RDRDRS Trigger: GCTGCGGTCCCTGTCCCTGCAGCGCTGCCCCAACCT...CTTCAAATGTGGGAGTCCCAGTGTGTCCGCCCACCCCACCCCCAGATGGAGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTGCCCTGAGATGTCCAGCCTaGGGAGGTTCTGGAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CQGKLLATQQPGCWASAALRCPA*GGSGGG Trigger: ACCACCTCCAGAACCTCCGCAGGCTGGACATCTCAG...GGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | CATCTGGGGGTGGGGTGGGCGGACACACTGGGACTCCCACATTTGAAGGTGCTCGGATGCGCCTGGCTCTaGCATTCCATTCTCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HLGVGWADTLGLPHLKVLGCAWL*HSILGR Trigger: GCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCC...GAGCACCTTCAAATGTGGGAGTCCCAGTGTGTCCGCCCACCCCACCCCCAGATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | TCACAGTTGATAGGAGTGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTGGGTGCCACCAGGATCTGAGTaGGACCTGGGTGGGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLIGVPGEAAGHPTAWVPPGSE*DLGGTR Trigger: CCGTGTCCCACCCAGGTCTCACTCAGATCCTGGTGG...CACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | CATCTCCATCTGGGGGTGGGGTGGGCGGACACACTGGGACTCCCACATTTGAAGACCAGTCGTCCAGGTTaGGGCAGCGCTGCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HLHLGVGWADTLGLPHLKTSRPG*GSAAGT Trigger: TGTCCCTGCAGCGCTGCCCCAACCTGGACGACTGGT...CTTCAAATGTGGGAGTCCCAGTGTGTCCGCCCACCCCACCCCCAGATGGAGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | CGCCAGGATCAATCACAGTTGATAGGAGTGCCAGGGGAAGCTGCTGGCCACCCACGGAGGTTCTGGAGGTaGTGGAGGCAGGCAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RQDQSQLIGVPGEAAGHPRRFWR*WRQARP Trigger: GGGCCTTGCCTGCCTCCACCACCTCCAGAACCTCCG...TGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTGTGATTGATCCTGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | CAGCCACAGTTCCTGCTGATGTGTATGGGCAGAGTTTGGGGGAAACGGTGGAGCCACGGCAGGGAGGTCTaGGATGTCCAGCCTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPQFLLMCMGRVWGKRWSHGREV*DVQPAE Trigger: CTCCGCAGGCTGGACATCTCAGACCTCCCTGCCGTG...GCTCCACCGTTTCCCCCAAACTCTGCCCATACACATCAGCAGGAACTGTGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | CGCCAGGATCAATCACAGTTGATAGGAGTGCCAGGGGAAGCTGCTGGCCACCCACCACCAGGATCTGAGTaGGACCTGGGTGGGACACGG | + |
|
Preference number: 4 (lower is better) Translates to: RQDQSQLIGVPGEAAGHPPPGSE*DLGGTR Trigger: CCGTGTCCCACCCAGGTCTCACTCAGATCCTGGTGG...TGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTGTGATTGATCCTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | CATCTGGGGGTGGGGTGGGCGGACACACTGGGACTCCCACATTTGAAGGTGCTCCTGAGATGTCCAGCCTaGGGAGGTTCTGGAGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLGVGWADTLGLPHLKVLLRCPA*GGSGGG Trigger: ACCACCTCCAGAACCTCCGCAGGCTGGACATCTCAG...GAGCACCTTCAAATGTGGGAGTCCCAGTGTGTCCGCCCACCCCACCCCCAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | CATCTCCATCTGGGGGTGGGGTGGGCGGACACACTGGGACTCCCACATTTGAAGCCCGTTCTGAGATTCTaGGGCAGCCAGCCAGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLHLGVGWADTLGLPHLKPVLRF*GSQPAR Trigger: TCTCGCTGGCTGGCTGCCCCAGAATCTCAGAACGGG...CTTCAAATGTGGGAGTCCCAGTGTGTCCGCCCACCCCACCCCCAGATGGAGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | CATCTGGGGGTGGGGTGGGCGGACACACTGGGACTCCCACATTTGAAGGTGCTCTCACCAACTCACTCATaGCATGGATGCGCCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLGVGWADTLGLPHLKVLSPTHS*HGCAWL Trigger: GAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGA...GAGCACCTTCAAATGTGGGAGTCCCAGTGTGTCCGCCCACCCCACCCCCAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | GGTGCTGGGCAAGTGCTGCCCTCCCTGCTACACTCTAAAGTCCCCGCACAGGTCGGGGGTAGATGTGTCTaGAGGCTGCTTGTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GAGQVLPSLLHSKVPAQVGGRCV*RLLVWF Trigger: GAACCAGACAAGCAGCCTCCAGACACATCTACCCCC...GACCTGTGCGGGGACTTTAGAGTGTAGCAGGGAGGGCAGCACTTGCCCAGCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| 3UTR CAA 72 bp | AGCCACCGGAAACATGGGCGCCAGGATCAATCACAGTaGATAGGAGTGCCAGGGGAAGCTGCTGGCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHRKHGRQDQSQ*IGVPGEAAGHP Trigger: TGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTGTGATTGATCCTGGCGCCCATGTTTCCGGTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | TGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTGGGTGCTGGGCAAGTGCTGCCCTCCCTGTTGACTTTTaGGATCTGTTTCTGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CQGKLLATQQPGCWASAALPVDF*DLFLEQ Trigger: TTGCTCCAGAAACAGATCTCAAAAGTCAACAGGGAG...GGCAGCACTTGCCCAGCACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | GCCACTGGCATCCACAGCCTCCACAGGCACATTCTGGAACTTCTGAATCTCGGCTGGAAACCTGGGGGCTaGCCCTGGGAATCCTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ATGIHSLHRHILELLNLGWKPGG*PWESSS Trigger: GCTAGAGGATTCCCAGGGTCAGCCCCCAGGTTTCCA...GCCGAGATTCAGAAGTTCCAGAATGTGCCTGTGGAGGCTGTGGATGCCAGTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
||
| CDS-3UTR CCA 90 bp | TCCACAGTGTATTGGGTTCATGACAGAGCCACCGGAAACATGGGCGCCAGGATCAGGTTCTGGAGGTGGTaGAGGCAGGCAAGGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: STVYWVHDRATGNMGARIRFWRW*RQARPR Trigger: ACGGGGCCTTGCCTGCCTCCACCACCTCCAGAACCT...GATCCTGGCGCCCATGTTTCCGGTGGCTCTGTCATGAACCCAATACACTGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | TCACAGTTGATAGGAGTGCCAGGGGAAGCTGCTGGCCACCCAACAGCCTGGGTGTCCAGCTTGAGATTCTaGGCCCAGTCAGCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLIGVPGEAAGHPTAWVSSLRF*AQSAPR Trigger: CCTTGGAGCTGACTGGGCCCAGAATCTCAAGCTGGA...CACCCAGGCTGTTGGGTGGCCAGCAGCTTCCCCTGGCACTCCTATCAACTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | CTGCAGTCAGCCAGTCCTGACTCAGTCTTCTTATCTTCCCATGCTGCTCCGTGCATAGGTAGAGGCGGCTaGGGCACCAGTCGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSASPDSVFLSSHAAPCIGRGG*GTSRPG Trigger: ACCTGGACGACTGGTGCCTCAGCCGCCTCTACCTAT...GCACGGAGCAGCATGGGAAGATAAGAAGACTGAGTCAGGACTGGCTGACTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCATGCTGCTCCGTGCTGAATGAGCTACACCAGAAGCCAGACTGTGAGAAGGGATGCGCCTGGCTCTaGCATTCCATTCTCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FPCCSVLNELHQKPDCEKGCAWL*HSILGR Trigger: GCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCC...CTTCTCACAGTCTGGCTTCTGGTGTAGCTCATTCAGCACGGAGCAGCATGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | TCCACAGTGTATTGGGTTCATGACAGAGCCACCGGAAACATGGGCGCCAGGATCGCCAGCGAGAGCTCCTaGAGTGAGCCAGCCAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: STVYWVHDRATGNMGARIASESS*SEPANR Trigger: CCTATTGGCTGGCTCACTGCAGGAGCTCTCGCTGGC...GATCCTGGCGCCCATGTTTCCGGTGGCTCTGTCATGAACCCAATACACTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | ACTCTAAAGTCCCCGCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGAGGTTCTGGAGGTGGTaGAGGCAGGCAAGGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLKSPHRSLYFGFSPAVVRFWRW*RQARPR Trigger: ACGGGGCCTTGCCTGCCTCCACCACCTCCAGAACCT...CACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGACTTTAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | GTCTCATGTCAGCCACAGTTCCTGCTGATGTGTATGGGCAGAGTTTGGGGGAAACGGAGGTTCTGGAGGTaGTGGAGGCAGGCAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSCQPQFLLMCMGRVWGKRRFWR*WRQARP Trigger: GGGCCTTGCCTGCCTCCACCACCTCCAGAACCTCCG...TTTCCCCCAAACTCTGCCCATACACATCAGCAGGAACTGTGGCTGACATGAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | CACAGCATGGAGGGCTGTCTGCCCAGGCAACAGATGTTTGCCAGTTGCAGGCTGCTCCCTGCTTCAGGATaGAGACAGCACCTGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HSMEGCLPRQQMFASCRLLPASG*RQHLQH Trigger: ATGTTGCAGGTGCTGTCTTCATCCTGAAGCAGGGAG...CAGCCTGCAACTGGCAAACATCTGTTGCCTGGGCAGACAGCCCTCCATGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | ACTCTAAAGTCCCCGCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGATAGGTAGAGGCGGCTaGGGCACCAGTCGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLKSPHRSLYFGFSPAVVIGRGG*GTSRPG Trigger: ACCTGGACGACTGGTGCCTCAGCCGCCTCTACCTAT...CACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGACTTTAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | AAGACTTCAGACTCTCCACAGAGCCCACAAGACCCTTCAAGAGCTGGGCCACAGCACTCATGCCATGGATaGGCCTGGCTCTGCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTSDSPQSPQDPSRAGPQHSCHG*AWLCHS Trigger: GGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTG...CTGTGGCCCAGCTCTTGAAGGGTCTTGTGGGCTCTGTGGAGAGTCTGAAGTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | GCCACTGGCATCCACAGCCTCCACAGGCACATTCTGGAACTTCTGAATCTCGGCTCACCAACTCACTCATaGCATGGATGCGCCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATGIHSLHRHILELLNLGSPTHS*HGCAWL Trigger: GAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGA...GCCGAGATTCAGAAGTTCCAGAATGTGCCTGTGGAGGCTGTGGATGCCAGTGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGTCTGCCCAGGCAACAGATGTTTGCCAGTTGCAGGCTGCAGTCAGCCAGTCCTGAAACTTCACTaGGCCTCCCTGCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RAVCPGNRCLPVAGCSQPVLKLH*ASLLQD Trigger: ATCCTGAAGCAGGGAGGCGCAGTGAAGTTTCAGGAC...TGGCTGACTGCAGCCTGCAACTGGCAAACATCTGTTGCCTGGGCAGACAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| 3UTR CAA 72 bp | TCAGCCACAGTTCCTGCTGATGTGTATGGGCAGAGTTaGGGGGAAACGGTGGAGCCGCATGCAGCTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SATVPADVYGQS*GETVEPHAAVT Trigger: TGTGACAGCTGCATGCGGCTCCACCGTTTCCCCCAAACTCTGCCCATACACATCAGCAGGAACTGTGGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | TCCACAGTGTATTGGGTTCATGACAGAGCCACCGGAAACATGGGCGCCAGGATCCATTCCTCCTTGTCCTaGAACTTCACTGCGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: STVYWVHDRATGNMGARIHSSLS*NFTAPP Trigger: GGGAGGCGCAGTGAAGTTTCAGGACAAGGAGGAATG...GATCCTGGCGCCCATGTTTCCGGTGGCTCTGTCATGAACCCAATACACTGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | ACTCTAAAGTCCCCGCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGTCAGGCCCTGGTAGTTaGTGGCACAGCCACTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TLKSPHRSLYFGFSPAVVSGPGS*WHSHWH Trigger: ATGCCAGTGGCTGTGCCATCAACTACCAGGGCCTGA...CACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGACTTTAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | CTCTCCGGCGGTCGTGCCAGAAAGAGAATATTTTCTCAAATACTCATCTCCATCAGGTTGGGGCAGCGCTaGAGGGACAGGGACCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGGRARKRIFSQILISIRLGQR*RDRDRS Trigger: GCTGCGGTCCCTGTCCCTGCAGCGCTGCCCCAACCT...GATGGAGATGAGTATTTGAGAAAATATTCTCTTTCTGGCACGACCGCCGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | GGTGCTGGGCAAGTGCTGCCCTCCCTGCTACACTCTAAAGTCCCCGCACAGGTCGGGCCATATTTCTCCTaGATGTTAGTGAAGGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: GAGQVLPSLLHSKVPAQVGPYFS*MLVKDR Trigger: TCGATCCTTCACTAACATCCAGGAGAAATATGGCCC...GACCTGTGCGGGGACTTTAGAGTGTAGCAGGGAGGGCAGCACTTGCCCAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | CCAGACTGTGAGAAGACTTCAGACTCTCCACAGAGCCCACAAGACCCTTCAAGAGATCTGAGTGAGACCTaGGTGGGACACGGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDCEKTSDSPQSPQDPSRDLSET*VGHGRE Trigger: CTCCCTGCCGTGTCCCACCCAGGTCTCACTCAGATC...TCTTGAAGGGTCTTGTGGGCTCTGTGGAGAGTCTGAAGTCTTCTCACAGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | GTCTCATGTCAGCCACAGTTCCTGCTGATGTGTATGGGCAGAGTTTGGGGGAAAGATCTGAGTGAGACCTaGGTGGGACACGGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSCQPQFLLMCMGRVWGKDLSET*VGHGRE Trigger: CTCCCTGCCGTGTCCCACCCAGGTCTCACTCAGATC...TTTCCCCCAAACTCTGCCCATACACATCAGCAGGAACTGTGGCTGACATGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | CTCCGGCGGTCGTGCCAGAAAGAGAATATTTTCTCAAATACTCATCTCCATCTGCACGGCAGGGAGGTCTaGGATGTCCAGCCTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRRSCQKENIFSNTHLHLHGREV*DVQPAE Trigger: CTCCGCAGGCTGGACATCTCAGACCTCCCTGCCGTG...CAGATGGAGATGAGTATTTGAGAAAATATTCTCTTTCTGGCACGACCGCCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | CAGGATGAAGACAGCACCTGCAACATACGGGCCATATTTCTCCTGGATGTTAGTGGATGCGCCTGGCTCTaGCATTCCATTCTCGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QDEDSTCNIRAIFLLDVSGCAWL*HSILGR Trigger: GCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCC...ACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
||
| CDS-3UTR GCA 90 bp | CCAGACTGTGAGAAGACTTCAGACTCTCCACAGAGCCCACAAGACCCTTCAAGACACTCATGCCATGGATaGGCCTGGCTCTGCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PDCEKTSDSPQSPQDPSRHSCHG*AWLCHS Trigger: GGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTG...TCTTGAAGGGTCTTGTGGGCTCTGTGGAGAGTCTGAAGTCTTCTCACAGTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | ACCAGAAGCCAGACTGTGAGAAGACTTCAGACTCTCCACAGAGCCCACAAGACCTCACCAACTCACTCATaGCATGGATGCGCCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRSQTVRRLQTLHRAHKTSPTHS*HGCAWL Trigger: GAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGA...GGTCTTGTGGGCTCTGTGGAGAGTCTGAAGTCTTCTCACAGTCTGGCTTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | AAGACTTCAGACTCTCCACAGAGCCCACAAGACCCTTCAAGAGCTGGGCCACAGTTCACTGCGCCTCCCTaGTTCAGGATGAAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTSDSPQSPQDPSRAGPQFTAPP*FRMKTA Trigger: TGCTGTCTTCATCCTGAAGCAGGGAGGCGCAGTGAA...CTGTGGCCCAGCTCTTGAAGGGTCTTGTGGGCTCTGTGGAGAGTCTGAAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | TCCCCGCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGCCAGAAAGAGTCCTGAAACTTCACTaGGCCTCCCTGCTTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPHRSLYFGFSPAVVPERVLKLH*ASLLQD Trigger: ATCCTGAAGCAGGGAGGCGCAGTGAAGTTTCAGGAC...TCTTTCTGGCACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | CATCTCCATCTGGGGGTGGGGTGGGCGGACACACTGGGACTCCCACATTTGAAGGGGCCATATTTCTCCTaGATGTTAGTGAAGGATCGA | + |
|
Preference number: 4 (lower is better) Translates to: HLHLGVGWADTLGLPHLKGPYFS*MLVKDR Trigger: TCGATCCTTCACTAACATCCAGGAGAAATATGGCCC...CTTCAAATGTGGGAGTCCCAGTGTGTCCGCCCACCCCACCCCCAGATGGAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | CTTATCTTCCCATGCTGCTCCGTGCTGAATGAGCTACACCAGAAGCCAGACTGTCATTCCTCCTTGTCCTaGAACTTCACTGCGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LIFPCCSVLNELHQKPDCHSSLS*NFTAPP Trigger: GGGAGGCGCAGTGAAGTTTCAGGACAAGGAGGAATG...ACAGTCTGGCTTCTGGTGTAGCTCATTCAGCACGGAGCAGCATGGGAAGATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | AGGGCTGTCTGCCCAGGCAACAGATGTTTGCCAGTTGCAGGCTGCAGTCAGCCAGATGAAGACAGCACCTaGAACATACGGGCCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: RAVCPGNRCLPVAGCSQPDEDST*NIRAIF Trigger: AAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATC...TGGCTGACTGCAGCCTGCAACTGGCAAACATCTGTTGCCTGGGCAGACAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | CTCCGGCGGTCGTGCCAGAAAGAGAATATTTTCTCAAATACTCATCTCCATCTGAGCCTGCGGAGGTTCTaGAGGTGGTGGAGGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRRSCQKENIFSNTHLHLSLRRF*RWWRQA Trigger: TGCCTGCCTCCACCACCTCCAGAACCTCCGCAGGCT...CAGATGGAGATGAGTATTTGAGAAAATATTCTCTTTCTGGCACGACCGCCGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | GCCACTGGCATCCACAGCCTCCACAGGCACATTCTGGAACTTCTGAATCTCGGCCTCCCTGTTGACTTTTaGGATCTGTTTCTGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ATGIHSLHRHILELLNLGLPVDF*DLFLEQ Trigger: TTGCTCCAGAAACAGATCTCAAAAGTCAACAGGGAG...GCCGAGATTCAGAAGTTCCAGAATGTGCCTGTGGAGGCTGTGGATGCCAGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
||
| CDS-3UTR TCA 90 bp | CAGGATGAAGACAGCACCTGCAACATACGGGCCATATTTCTCCTGGATGTTAGTAGGCAGGCCACACAGTaGAGTGTTGGAAACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QDEDSTCNIRAIFLLDVSRQATQ*SVGNLG Trigger: CCCCAGGTTTCCAACACTTCACTGTGTGGCCTGCCT...ACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
||
| CDS-3UTR CCA 90 bp | CTCTCCGGCGGTCGTGCCAGAAAGAGAATATTTTCTCAAATACTCATCTCCATCCCCGTTCTGAGATTCTaGGGCAGCCAGCCAGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSGGRARKRIFSQILISIPVLRF*GSQPAR Trigger: TCTCGCTGGCTGGCTGCCCCAGAATCTCAGAACGGG...GATGGAGATGAGTATTTGAGAAAATATTCTCTTTCTGGCACGACCGCCGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | AGTCTTCTTATCTTCCCATGCTGCTCCGTGCTGAATGAGCTACACCAGAAGCCACTCCCTGCTTCAGGATaGAGACAGCACCTGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLLIFPCCSVLNELHQKPLPASG*RQHLQH Trigger: ATGTTGCAGGTGCTGTCTTCATCCTGAAGCAGGGAG...TGGCTTCTGGTGTAGCTCATTCAGCACGGAGCAGCATGGGAAGATAAGAAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | TCCACAGTGTATTGGGTTCATGACAGAGCCACCGGAAACATGGGCGCCAGGATCGATGAAGACAGCACCTaGAACATACGGGCCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: STVYWVHDRATGNMGARIDEDST*NIRAIF Trigger: AAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATC...GATCCTGGCGCCCATGTTTCCGGTGGCTCTGTCATGAACCCAATACACTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR GCA 90 bp | GCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGCCAGAAAGAGAATATTCACTGCGCCTCCCTaGTTCAGGATGAAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQVSLLWILSGGRARKRIFTAPP*FRMKTA Trigger: TGCTGTCTTCATCCTGAAGCAGGGAGGCGCAGTGAA...TATTCTCTTTCTGGCACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | GCTGATGTGTATGGGCAGAGTTTGGGGGAAACGGTGGAGCCGCATGCAGCTGTCTTTGAGATCTGTTTCTaGAGCAAGTACTCTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ADVYGQSLGETVEPHAAVFEICF*SKYSLR Trigger: TCTGAGAGAGTACTTGCTCCAGAAACAGATCTCAAA...GACAGCTGCATGCGGCTCCACCGTTTCCCCCAAACTCTGCCCATACACATCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | AGGGCTGTCTGCCCAGGCAACAGATGTTTGCCAGTTGCAGGCTGCAGTCAGCCATTTGAGATCTGTTTCTaGAGCAAGTACTCTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAVCPGNRCLPVAGCSQPFEICF*SKYSLR Trigger: TCTGAGAGAGTACTTGCTCCAGAAACAGATCTCAAA...TGGCTGACTGCAGCCTGCAACTGGCAAACATCTGTTGCCTGGGCAGACAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | GTCTCATGTCAGCCACAGTTCCTGCTGATGTGTATGGGCAGAGTTTGGGGGAAATGGAGGCTGCTTGTCTaGTTCCAGCTTGAGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSCQPQFLLMCMGRVWGKWRLLV*FQLEIL Trigger: CAGAATCTCAAGCTGGAACCAGACAAGCAGCCTCCA...TTTCCCCCAAACTCTGCCCATACACATCAGCAGGAACTGTGGCTGACATGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | ACTCTAAAGTCCCCGCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGCTCCCTGTTGACTTTTaGGATCTGTTTCTGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLKSPHRSLYFGFSPAVVLPVDF*DLFLEQ Trigger: TTGCTCCAGAAACAGATCTCAAAAGTCAACAGGGAG...CACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGCGGGGACTTTAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | CTCTCCGGCGGTCGTGCCAGAAAGAGAATATTTTCTCAAATACTCATCTCCATCTCCAGCTTGAGATTCTaGGCCCAGTCAGCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGGRARKRIFSQILISISSLRF*AQSAPR Trigger: CCTTGGAGCTGACTGGGCCCAGAATCTCAAGCTGGA...GATGGAGATGAGTATTTGAGAAAATATTCTCTTTCTGGCACGACCGCCGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | CTCCGGCGGTCGTGCCAGAAAGAGAATATTTTCTCAAATACTCATCTCCATCTGGGGGGTAGATGTGTCTaGAGGCTGCTTGTCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRRSCQKENIFSNTHLHLGGRCV*RLLVWF Trigger: GAACCAGACAAGCAGCCTCCAGACACATCTACCCCC...CAGATGGAGATGAGTATTTGAGAAAATATTCTCTTTCTGGCACGACCGCCGGAG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | TTCCCATGCTGCTCCGTGCTGAATGAGCTACACCAGAAGCCAGACTGTGAGAAGATCGATTCTCCCTGTTaGCTTTTGAGATCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPCCSVLNELHQKPDCEKIDSPC*LLRSVS Trigger: AGAAACAGATCTCAAAAGTCAACAGGGAGAATCGAT...CTTCTCACAGTCTGGCTTCTGGTGTAGCTCATTCAGCACGGAGCAGCATGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CCA 90 bp | CTCTCCGGCGGTCGTGCCAGAAAGAGAATATTTTCTCAAATACTCATCTCCATCTGGAGGCTGCTTGTCTaGTTCCAGCTTGAGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGGRARKRIFSQILISIWRLLV*FQLEIL Trigger: CAGAATCTCAAGCTGGAACCAGACAAGCAGCCTCCA...GATGGAGATGAGTATTTGAGAAAATATTCTCTTTCTGGCACGACCGCCGGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | CTTATCTTCCCATGCTGCTCCGTGCTGAATGAGCTACACCAGAAGCCAGACTGTATCGATTCTCCCTGTTaGCTTTTGAGATCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIFPCCSVLNELHQKPDCIDSPC*LLRSVS Trigger: AGAAACAGATCTCAAAAGTCAACAGGGAGAATCGAT...ACAGTCTGGCTTCTGGTGTAGCTCATTCAGCACGGAGCAGCATGGGAAGATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR TCA 90 bp | CAGGATGAAGACAGCACCTGCAACATACGGGCCATATTTCTCCTGGATGTTAGTAACGATTCTCCCTGTTaGCTTTTGAGATCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QDEDSTCNIRAIFLLDVSNDSPC*LLRSVS Trigger: AGAAACAGATCTCAAAAGTCAACAGGGAGAATCGTT...ACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATGAAGACAGCACCTGCAACATACGGGCCATATTTCTCCTGGATGTTAGTTTTGAGATCTGTTTCTaGAGCAAGTACTCTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QDEDSTCNIRAIFLLDVSFEICF*SKYSLR Trigger: TCTGAGAGAGTACTTGCTCCAGAAACAGATCTCAAA...ACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
||
| CDS TCA 90 bp | CCAGCGAGAGCTCCTGCAGTGAGCCAGCCAATAGGTAGAGGCGGCTaGGGCACCAGTCGTCCAGGTTGGGGCAGCGCTGCAGGGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PARAPAVSQPIGRGG*GTSRPGWGSAAGTG Trigger: CCCTGTCCCTGCAGCGCTGCCCCAACCTGGACGACTGGTGCCTCAGCCGCCTCTACCTATTGGCTGGCTCACTGCAGGAGCTCTCGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS GCA 90 bp | TGTCCGGGGTCACCAACTCACTCATGCCATGGATGCGCCTGGCTCTaGCATTCCATTCTCGGGCGCCCAGGTGCAGGACCGCTCTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CPGSPTHSCHGCAWL*HSILGRPGAGPLWA Trigger: CGCCCAGAGCGGTCCTGCACCTGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGACCCCGGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077338.12 |
||
| CDS CCA 90 bp | GACTGCTGTCCGGGGTCACCAACTCACTCATGCCATGGATGCGCCTaGCTCTGCCATTCCATTCTCGGGCGCCCAGGTGCAGGACCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DCCPGSPTHSCHGCA*LCHSILGRPGAGPL Trigger: GAGCGGTCCTGCACCTGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGACCCCGGACAGCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077338.12 |
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| CDS GCA 90 bp | TCTCCCGACTGCTGTCCGGGGTCACCAACTCACTCATGCCATGGATaGGCCTGGCTCTGCCATTCCATTCTCGGGCGCCCAGGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SPDCCPGSPTHSCHG*AWLCHSILGRPGAG Trigger: TCCTGCACCTGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGACCCCGGACAGCAGTCGGGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
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| CDS CCA 90 bp | GGTTCTGGAGGTGGTGGAGGCAGGCAAGGCCCCGTTCTGAGATTCTaGGGCAGCCAGCCAGCGAGAGCTCCTGCAGTGAGCCAGCCAATA | + |
|
Preference number: 5 (lower is better) Translates to: GSGGGGGRQGPVLRF*GSQPARAPAVSQPI Trigger: TATTGGCTGGCTCACTGCAGGAGCTCTCGCTGGCTGGCTGCCCCAGAATCTCAGAACGGGGCCTTGCCTGCCTCCACCACCTCCAGAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS CCA 90 bp | GACTGCTGTCCGGGGTCACCAACTCACTCATGCCATGGATGCGCCTaGCTCTGCCATTCCATTCTCGGGCGCCCAGGTGCAGGACGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DCCPGSPTHSCHGCA*LCHSILGRPGAGRA Trigger: TGCACGTCCTGCACCTGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGACCCCGGACAGCAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085953.5 |
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| CDS TCA 90 bp | GCTCCAAGGACCTCACAGTGGGGCAACATCTCTTCCACCAGGATCTaGGTGAGACCTGGGTGGGACACGGCAGGGAGGTCTGAGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: APRTSQWGNISSTRI*VRPGWDTAGRSEMS Trigger: GGACATCTCAGACCTCCCTGCCGTGTCCCACCCAGGTCTCACTCAGATCCTGGTGGAAGAGATGTTGCCCCACTGTGAGGTCCTTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS GCA 90 bp | TTCTTTTCTTCTCCCGACTGCTGTCCGGGGTCACCAACTCACTCATaGCATGGATGCGCCTGGCTCTGCCATTCCATTCTCGGGCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FFSSPDCCPGSPTHS*HGCAWLCHSILGRP Trigger: TGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGACCCCGGACAGCAGTCGGGAGAAGAAAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
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| CDS CCA 90 bp | GTAGATGTGTCTGGAGGCTGCTTGTCTGGTTCCAGCTTGAGATTCTaGGCCCAGTCAGCTCCAAGGACCTCACAGTGGGGCAACATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VDVSGGCLSGSSLRF*AQSAPRTSQWGNIS Trigger: AGAGATGTTGCCCCACTGTGAGGTCCTTGGAGCTGACTGGGCCCAGAATCTCAAGCTGGAACCAGACAAGCAGCCTCCAGACACATCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS GCA 90 bp | AATGATCTGAGAGGAACTGCAACAGCGTTCTTTTCTTCTCCCGACTaGTGTCCGGGGTCACCAACTCACTCATGCCATGGATGCGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NDLRGTATAFFSSPD*CPGSPTHSCHGCAW Trigger: CCAGGCGCATCCATGGCATGAGTGAGTTGGTGACCCCGGACAGCAGTCGGGAGAAGAAAAGAACGCTGTTGCAGTTCCTCTCAGATCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
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| CDS-3UTR CAA 90 bp | CAGGATGAAGACAGCACCTGCAACATACGGGCCATATTTCTCCTGGATGTTAGTCCACACAGTGAAGTGTaGGAAACCTGGGGGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QDEDSTCNIRAIFLLDVSPHSEV*ETWGLT Trigger: GGTCAGCCCCCAGGTTTCCAACACTTCACTGTGTGG...ACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| CDS GCA 90 bp | CTGAAACTTCACTGCGCCTCCCTGCTTCAGGATGAAGACAGCACCTaGAACATACGGGCCATATTTCTCCTGGATGTTAGTGAAGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: LKLHCASLLQDEDST*NIRAIFLLDVSEGS Trigger: CGATCCTTCACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTGAAGCAGGGAGGCGCAGTGAAGTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS-3UTR CAA 90 bp | GCACAGGTCTCTTTACTTTGGATTCTCTCCGGCGGTCGTGCCAGAAAGAGAATATTGTCTGGTTCCAGCTaGAGATTCTGGGCCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AQVSLLWILSGGRARKRILSGSS*RFWAQS Trigger: TGACTGGGCCCAGAATCTCAAGCTGGAACCAGACAA...TATTCTCTTTCTGGCACGACCGCCGGAGAGAATCCAAAGTAAAGAGACCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS TCA 90 bp | CTGGAGCAAGTACTCTCTCAGAGTCTGGATGTCCTGGAAATGATCTaGGAGGAACTGCAACAGCGTTCTTTTCTTCTCCCGACTGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LEQVLSQSLDVLEMI*EELQQRSFLLPTAV Trigger: GACAGCAGTCGGGAGAAGAAAAGAACGCTGTTGCAGTTCCTCTCAGATCATTTCCAGGACATCCAGACTCTGAGAGAGTACTTGCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
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| CDS-3UTR CAA 90 bp | TTTCCACAGTGTATTGGGTTCATGACAGAGCCACCGGAAACATGGGCGCCAGGAGATCGATTCTCCCTGTaGACTTTTGAGATCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FPQCIGFMTEPPETWAPGDRFSL*TFEICF Trigger: GAAACAGATCTCAAAAGTCAACAGGGAGAATCGATC...TCCTGGCGCCCATGTTTCCGGTGGCTCTGTCATGAACCCAATACACTGTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS-3UTR CAA 90 bp | CTCTCCGGCGGTCGTGCCAGAAAGAGAATATTTTCTCAAATACTCATCTCCATCTTGTCTGGTTCCAGCTaGAGATTCTGGGCCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSGGRARKRIFSQILISILSGSS*RFWAQS Trigger: TGACTGGGCCCAGAATCTCAAGCTGGAACCAGACAA...GATGGAGATGAGTATTTGAGAAAATATTCTCTTTCTGGCACGACCGCCGGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS TCA 90 bp | TGTTTCTGGAGCAAGTACTCTCTCAGAGTCTGGATGTCCTGGAAATaGTCTGAGAGGAACTGCAACAGCGTTCTTTTCTTCTCCCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: CFWSKYSLRVWMSWK*SERNCNSVLFFSRL Trigger: CAGTCGGGAGAAGAAAAGAACGCTGTTGCAGTTCCTCTCAGATCATTTCCAGGACATCCAGACTCTGAGAGAGTACTTGCTCCAGAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
||
| CDS-3UTR CAA 90 bp | CTTATCTTCCCATGCTGCTCCGTGCTGAATGAGCTACACCAGAAGCCAGACTGTGATCGATTCTCCCTGTaGACTTTTGAGATCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LIFPCCSVLNELHQKPDCDRFSL*TFEICF Trigger: GAAACAGATCTCAAAAGTCAACAGGGAGAATCGATC...ACAGTCTGGCTTCTGGTGTAGCTCATTCAGCACGGAGCAGCATGGGAAGATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS CCA 90 bp | TTCAGGATGAAGACAGCACCTGCAACATACGGGCCATATTTCTCCTaGATGTTAGTGAAGGATCGATTCTCCCTGTTGACTTTTGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: FRMKTAPATYGPYFS*MLVKDRFSLLTFEI Trigger: GATCTCAAAAGTCAACAGGGAGAATCGATCCTTCACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS-3UTR CAA 90 bp | CAGGATGAAGACAGCACCTGCAACATACGGGCCATATTTCTCCTGGATGTTAGTAAACGATTCTCCCTGTaGACTTTTGAGATCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QDEDSTCNIRAIFLLDVSKRFSL*TFEICF Trigger: GAAACAGATCTCAAAAGTCAACAGGGAGAATCGTTT...ACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
||
| CDS GCA 72 bp | CGGCTGAGGCACCAGTCGTCCAGGTTGGGGCAGCGCTaGAGGGACAGGGACCGCAGCTCCTTCAGGGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RLRHQSSRLGQR*RDRDRSSFRGK Trigger: CTTGCCCCTGAAGGAGCTGCGGTCCCTGTCCCTGCAGCGCTGCCCCAACCTGGACGACTGGTGCCTCAGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS CCA 72 bp | GGTGGTGGAGGCAGGCAAGGCCCCGTTCTGAGATTCTaGGGCAGCCAGCCAGCGAGAGCTCCTGCAGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GGGGRQGPVLRF*GSQPARAPAVS Trigger: GCTCACTGCAGGAGCTCTCGCTGGCTGGCTGCCCCAGAATCTCAGAACGGGGCCTTGCCTGCCTCCACCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS TCA 72 bp | GCTCCTGCAGTGAGCCAGCCAATAGGTAGAGGCGGCTaGGGCACCAGTCGTCCAGGTTGGGGCAGCGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: APAVSQPIGRGG*GTSRPGWGSAA Trigger: TGCAGCGCTGCCCCAACCTGGACGACTGGTGCCTCAGCCGCCTCTACCTATTGGCTGGCTCACTGCAGGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS TCA 72 bp | CTGAGTGAGACCTGGGTGGGACACGGCAGGGAGGTCTaGGATGTCCAGCCTGCGGAGGTTCTGGAGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSETWVGHGREV*DVQPAEVLEVV Trigger: CACCACCTCCAGAACCTCCGCAGGCTGGACATCTCAGACCTCCCTGCCGTGTCCCACCCAGGTCTCACTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
||
| CDS CCA 72 bp | CCGGGGTCACCAACTCACTCATGCCATGGATGCGCCTaGCTCTGCCATTCCATTCTCGGGCGCCCAGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGSPTHSCHGCA*LCHSILGRPGA Trigger: TGCACCTGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGACCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
||
| CDS GCA 72 bp | TCACCAACTCACTCATGCCATGGATGCGCCTGGCTCTaGCATTCCATTCTCGGGCGCCCAGGTGCAGGACCG | + |
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Preference number: 6 (lower is better) Translates to: SPTHSCHGCAWL*HSILGRPGAGP Trigger: CGGTCCTGCACCTGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077338.12 |
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| CDS GCA 72 bp | TGCTGTCCGGGGTCACCAACTCACTCATGCCATGGATaGGCCTGGCTCTGCCATTCCATTCTCGGGCGCCCA | + |
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Preference number: 6 (lower is better) Translates to: CCPGSPTHSCHG*AWLCHSILGRP Trigger: TGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGACCCCGGACAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
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| CDS CCA 72 bp | CGACTGCTGTCCGGGGTCACCAACTCACTCATGCCATaGATGCGCCTGGCTCTGCCATTCCATTCTCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RLLSGVTNSLMP*MRLALPFHSRA Trigger: CGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGACCCCGGACAGCAGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
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| CDS GCA 72 bp | TCACCAACTCACTCATGCCATGGATGCGCCTGGCTCTaGCATTCCATTCTCGGGCGCCCAGGTGCAGGACGT | + |
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Preference number: 6 (lower is better) Translates to: SPTHSCHGCAWL*HSILGRPGAGR Trigger: ACGTCCTGCACCTGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085953.5 |
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| CDS TCA 72 bp | ACCTCACAGTGGGGCAACATCTCTTCCACCAGGATCTaGGTGAGACCTGGGTGGGACACGGCAGGGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: TSQWGNISSTRI*VRPGWDTAGRS Trigger: AGACCTCCCTGCCGTGTCCCACCCAGGTCTCACTCAGATCCTGGTGGAAGAGATGTTGCCCCACTGTGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS GCA 72 bp | TCTCCCGACTGCTGTCCGGGGTCACCAACTCACTCATaGCATGGATGCGCCTGGCTCTGCCATTCCATTCTC | + |
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Preference number: 6 (lower is better) Translates to: SPDCCPGSPTHS*HGCAWLCHSIL Trigger: GAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCATGAGTGAGTTGGTGACCCCGGACAGCAGTCGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
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| CDS TCA 72 bp | GCAGGCCACACAGTGAAGTGTTGGAAACCTGGGGGCTaGCCCTGGGAATCCTCTAGCATTGACAAACGATTC | + |
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Preference number: 6 (lower is better) Translates to: AGHTVKCWKPGG*PWESSSIDKRF Trigger: GAATCGTTTGTCAATGCTAGAGGATTCCCAGGGTCAGCCCCCAGGTTTCCAACACTTCACTGTGTGGCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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| CDS TCA 72 bp | GTACTCTCTCAGAGTCTGGATGTCCTGGAAATGATCTaGGAGGAACTGCAACAGCGTTCTTTTCTTCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: VLSQSLDVLEMI*EELQQRSFLLP Trigger: CGGGAGAAGAAAAGAACGCTGTTGCAGTTCCTCTCAGATCATTTCCAGGACATCCAGACTCTGAGAGAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
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| CDS TCA 72 bp | AGCAAGTACTCTCTCAGAGTCTGGATGTCCTGGAAATaGTCTGAGAGGAACTGCAACAGCGTTCTTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SKYSLRVWMSWK*SERNCNSVLFF Trigger: GAAGAAAAGAACGCTGTTGCAGTTCCTCTCAGATCATTTCCAGGACATCCAGACTCTGAGAGAGTACTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 ENSMUST00000126925.8 |
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| CDS CAA 72 bp | TTCTCCTGGATGTTAGTGAAGGATCGATTCTCCCTGTaGACTTTTGAGATCTGTTTCTGGAGCAAGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: FSWMLVKDRFSL*TFEICFWSKYS Trigger: AGAGTACTTGCTCCAGAAACAGATCTCAAAAGTCAACAGGGAGAATCGATCCTTCACTAACATCCAGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077338.12 ENSMUST00000085953.5 |
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| CDS CAA 72 bp | TGGGAATCCTCTAGCATTGACAAACGATTCTCCCTGTaGACTTTTGAGATCTGTTTCTGGAGCAAGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: WESSSIDKRFSL*TFEICFWSKYS Trigger: AGAGTACTTGCTCCAGAAACAGATCTCAAAAGTCAACAGGGAGAATCGTTTGTCAATGCTAGAGGATTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126925.8 |
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