Pregenerated sensors for DLX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029754Ensembl transcript IDs: ENSMUST00000031768.8, ENSMUST00000160937.9, ENSMUST00000171311.8
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACTGTGAAGGAAAATATCCTTACAGTGATGGGTTTCCAGAACACTaGCACAAAAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: DCEGKYPYSDGFPEH*HKSLSLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCTTTTGTGCCAGTGTTCTGGAAACCCATCACTGTAAGGATATTTTCCTTCACAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR-3UTR GCA 90 bp | AACACTGGCACAAAAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGCTGCCATGTTTGTaGAGATTCTTCTGCCGGTGG | + |
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Preference number: 2 (lower is better) Translates to: NTGTKASLSLSLSLSLSLMLPCL*RFFCRW Trigger: CCACCGGCAGAAGAATCTGCACAAACATGGCAGCAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCTTTTGTGCCAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGGTCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCAGTCCTGGATCCTCCTTaGCTCCTTCAGAAGCTCCGT | + |
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Preference number: 2 (lower is better) Translates to: LGLSSFQFRVWRWVMQRAVLDPP*LLQKLR Trigger: ACGGAGCTTCTGAAGGAGGCAAGGAGGATCCAGGAC...TGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGACCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR-3UTR GCA 90 bp | TCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCATCTTTTTGTGCAGATTCTTCTaGCGGTGGAGAATGTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SFFFPVQSLEVGYAKSIFLCRFF*RWRMSV Trigger: TACAGACATTCTCCACCGGCAGAAGAATCTGCACAA...AAAGATGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCATCTTTAAAATATCCTTACAGTaGTGGGTTTCCAGAACACTG | + |
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Preference number: 2 (lower is better) Translates to: SFFFPVQSLEVGYAKSIFKISLQ*WVSRTL Trigger: CAGTGTTCTGGAAACCCATCACTGTAAGGATATTTT...AAAGATGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCATCTTGTCATTCCTGATCATTaGATTTTGAAAAGACATGCA | + |
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Preference number: 2 (lower is better) Translates to: VFLLSSSEFGGGLCKEHLVIPDH*ILKRHA Trigger: TGCATGTCTTTTCAAAATGCAATGATCAGGAATGAC...AAGATGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCATCTTTGGAAGAAAGCAAGGATaGAAAGATAGGCAAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: SFFFPVQSLEVGYAKSIFGRKQG*KDRQEI Trigger: TATTTCTTGCCTATCTTTCCATCCTTGCTTTCTTCC...AAAGATGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR CCA 72 bp | CAATGCTTAGGCTGTTTGGCAGATACAACAGAGTCCTaGATCCTCCTTGCCTCCTTCAGAAGCTCCGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: QCLGCLADTTES*ILLASFRSSVG Trigger: GCCTACGGAGCTTCTGAAGGAGGCAAGGAGGATCCAGGACTCTGTTGTATCTGCCAAACAGCCTAAGCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR CCA 72 bp | GGAAAATATCCTTACAGTGATGGGTTTCCAGAACACTaGCACAAAAGCCTCTCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: GKYPYSDGFPEH*HKSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGGCTTTTGTGCCAGTGTTCTGGAAACCCATCACTGTAAGGATATTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR-3UTR CAA 90 bp | GTCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCATCTTAAAATGCTGCCATGTTaGTGCAGATTCTTCTGCCGG | + |
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Preference number: 3 (lower is better) Translates to: VFLLSSSEFGGGLCKEHLKMLPC*CRFFCR Trigger: CCGGCAGAAGAATCTGCACAAACATGGCAGCATTTT...AAGATGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR-3UTR CAA 90 bp | CTTGGTCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCACCTCTCAGTCTCAGATaGGTAAATAAAAATCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LGLSSFQFRVWRWVMQRAPLSLR*VNKNPG Trigger: TCCTGGATTTTTATTTACCAATCTGAGACTGAGAGG...TGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGACCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR-3UTR CAA 90 bp | TCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCATCTTTTTTGTATTAGCTGAGTaGTCATTCCTGATCATTGCA | + |
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Preference number: 3 (lower is better) Translates to: SFFFPVQSLEVGYAKSIFFVLAE*SFLIIA Trigger: TGCAATGATCAGGAATGACAACTCAGCTAATACAAA...AAAGATGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| 3UTR TCA 72 bp | GTATTAGCTGAGTTGTCATTCCTGATCATTGCATTTTaGAAAGACATGCAGTGTTTCCTTTGTGGCAATGTT | + |
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Preference number: 3 (lower is better) Translates to: VLAELSFLIIAF*KDMQCFLCGNV Trigger: AACATTGCCACAAAGGAAACACTGCATGTCTTTTCAAAATGCAATGATCAGGAATGACAACTCAGCTAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR GCA 90 bp | GTTTGGCAGATACAACAGAGTCCTGGATCCTCCTTGCCTCCTTCAGAAGCTCCGAGGGTAATGTGCGCCTaGCATGGCCGGGGAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: VWQIQQSPGSSLPPSEAPRVMCA*HGRGGL Trigger: CAGACCTCCCCGGCCATGGCAGGCGCACATTACCCT...CGGAGCTTCTGAAGGAGGCAAGGAGGATCCAGGACTCTGTTGTATCTGCCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR CCA 90 bp | CCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTCAGAAGCTCCGAATGTGCGCCTGCCATaGCCGGGGAGGTCTGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: PCLCRFFCRWRMSPSEAPNVRLP*PGRSAA Trigger: CGCAGCAGACCTCCCCGGCCATGGCAGGCGCACATT...CGGAGCTTCTGAAGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171311.8 |
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| CDS-3UTR TCA 90 bp | GTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTGGTGCTGGTGGTGGTaGTGGTGGGAGCCGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: VKMLPCLCRFFCRWRMSPWCWWW*WWEPAA Trigger: GGCGGCCGGCTCCCACCATCACCACCACCAGCACCA...AGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171311.8 |
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| CDS-3UTR GCA 90 bp | GTTTGGCAGATACAACAGAGTCCTGGATCCTCCTTGCCTCCTTCAGAAGCTCCGGGTGGTTGTAGGAGTTaGCTCCGCTCGACGCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: VWQIQQSPGSSLPPSEAPGGCRS*LRSTRR Trigger: CCTACGCGTCGAGCGGAGGCAACTCCTACAACCACC...CGGAGCTTCTGAAGGAGGCAAGGAGGATCCAGGACTCTGTTGTATCTGCCAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR CCA 90 bp | AACACTGGCACAAAAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATGTGCGCCTGCCATaGCCGGGGAGGTCTGCTGCG | + |
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Preference number: 4 (lower is better) Translates to: NTGTKASLSLSLSLSLSLNVRLP*PGRSAA Trigger: CGCAGCAGACCTCCCCGGCCATGGCAGGCGCACATT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCTTTTGTGCCAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR CCA 90 bp | ACAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCGTCCCCGCGCGTCTaGGCGGCCGCGCTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TSKNAAMFVQILLPVENVSSPRV*AAALLL Trigger: CAACAGCAGCGCGGCCGCCCAGACGCGCGGGGACGA...GACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR TCA 90 bp | CTTGGTCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCATGGTGCTGGTGGTGGTaGTGGTGGGAGCCGGCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LGLSSFQFRVWRWVMQRAWCWWW*WWEPAA Trigger: GGCGGCCGGCTCCCACCATCACCACCACCAGCACCA...TGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGACCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR GCA 90 bp | GCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTCAGAAGCTCCGGTGGTTGTAGGAGTTaGCTCCGCTCGACGCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMFVQILLPVENVSFRSSGGCRS*LRSTRR Trigger: CCTACGCGTCGAGCGGAGGCAACTCCTACAACCACC...GGAGCTTCTGAAGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171311.8 |
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| CDS-3UTR CCA 90 bp | TGTGAAGGAAAATATCCTTACAGTGATGGGTTTCCAGAACACTGGCACAAAAGCTCGTCCCCGCGCGTCTaGGCGGCCGCGCTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: CEGKYPYSDGFPEHWHKSSSPRV*AAALLL Trigger: CAACAGCAGCGCGGCCGCCCAGACGCGCGGGGACGA...GCTTTTGTGCCAGTGTTCTGGAAACCCATCACTGTAAGGATATTTTCCTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR TCA 90 bp | GCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTCAGAAGCTCCGCTGCCCGAACTCCATaGAGGCGGATTTGGACGAGT | + |
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Preference number: 4 (lower is better) Translates to: AMFVQILLPVENVSFRSSAARTP*RRIWTS Trigger: ACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGC...GGAGCTTCTGAAGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171311.8 |
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| CDS-3UTR GCA 90 bp | TGTTTGGCAGATACAACAGAGTCCTGGATCCTCCTTGCCTCCTTCAGAAGCTCCTGCTGCTGCTGCTGTTaGTGCTGCCCGAACTCCATG | + |
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Preference number: 4 (lower is better) Translates to: CLADTTESWILLASFRSSCCCCC*CCPNSM Trigger: CATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCA...GGAGCTTCTGAAGGAGGCAAGGAGGATCCAGGACTCTGTTGTATCTGCCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR TCA 90 bp | AACACTGGCACAAAAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTGCCCGAACTCCATaGAGGCGGATTTGGACGAGT | + |
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Preference number: 4 (lower is better) Translates to: NTGTKASLSLSLSLSLSLAARTP*RRIWTS Trigger: ACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCTTTTGTGCCAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR GCA 90 bp | TGTTTGGCAGATACAACAGAGTCCTGGATCCTCCTTGCCTCCTTCAGAAGCTCCTGCTGCTGCTGTTGCTaGTGCCCGAACTCCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: CLADTTESWILLASFRSSCCCCC*CPNSMK Trigger: CTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCA...GGAGCTTCTGAAGGAGGCAAGGAGGATCCAGGACTCTGTTGTATCTGCCAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR GCA 90 bp | ATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTCAGAATGCTGCTGCTGCTGTTaGTGCTGCCCGAACTCCATG | + |
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Preference number: 4 (lower is better) Translates to: MLPCLCRFFCRWRMSPSECCCCC*CCPNSM Trigger: CATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCA...TTCTGAAGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171311.8 |
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| CDS-3UTR GCA 90 bp | ACAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCAGGGTAATGTGCGCCTaGCATGGCCGGGGAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: TSKNAAMFVQILLPVENVRVMCA*HGRGGL Trigger: CAGACCTCCCCGGCCATGGCAGGCGCACATTACCCT...GACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR GCA 90 bp | CAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTTCTGGGCGGCCGCGCTaGTGTTGTGGTAGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: QVKMLPCLCRFFCRWRMSSGRPR*CCGRTG Trigger: TCCAGTCCTACCACAACAGCAGCGCGGCCGCCCAGA...AGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR GCA 90 bp | AATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTCAGATGCTGCTGCTGTTGCTaGTGCCCGAACTCCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: NAAMFVQILLPVENVSFRCCCCC*CPNSMK Trigger: CTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCA...TCTGAAGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171311.8 |
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| CDS-3UTR GCA 90 bp | ATTAAACAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGATCTGGGCGGCCGCGCTaGTGTTGTGGTAGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: IKQVKMLPCLCRFFCRWRSGRPR*CCGRTG Trigger: TCCAGTCCTACCACAACAGCAGCGCGGCCGCCCAGA...TCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTGTTTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR CCA 90 bp | ACAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCGATTTGGACGAGTCCTaGCCTTCCAAGCCGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: TSKNAAMFVQILLPVENVDLDES*PSKPSA Trigger: GGCTGACGGCTTGGAAGGCCAGGACTCGTCCAAATC...GACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR GCA 90 bp | AATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTCAGAATCATCTGTGGTCTCTaGATGGTGTCCTGGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: NAAMFVQILLPVENVSFRIICGL*MVSWCG Trigger: ACCACACCAGGACACCATGCAGAGACCACAGATGAT...TCTGAAGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031768.8 ENSMUST00000171311.8 |
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| CDS-3UTR CCA 90 bp | CAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTGGGGTCACTCTCGTGTaGGTTACTACCCTGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: QVKMLPCLCRFFCRWRMSGVTLV*VTTLLQ Trigger: CTGAAGCAGGGTAGTAACCCACACGAGAGTGACCCC...AGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031768.8 ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR CCA 90 bp | ACAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCGGGGTCACTCTCGTGTaGGTTACTACCCTGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TSKNAAMFVQILLPVENVGVTLV*VTTLLQ Trigger: CTGAAGCAGGGTAGTAACCCACACGAGAGTGACCCC...GACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031768.8 ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR CCA 90 bp | AAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTCACTCTGCATGGTGTCCTaGTGTGGTGAGGAATACCAG | + |
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Preference number: 4 (lower is better) Translates to: KMLPCLCRFFCRWRMSPSLCMVS*CGEEYQ Trigger: CTGGTATTCCTCACCACACCAGGACACCATGCAGAG...TGAAGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031768.8 ENSMUST00000171311.8 |
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| CDS-3UTR CCA 90 bp | AAACAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGGATTTGGACGAGTCCTaGCCTTCCAAGCCGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KQVKMLPCLCRFFCRWRMDLDES*PSKPSA Trigger: GGCTGACGGCTTGGAAGGCCAGGACTCGTCCAAATC...CATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR CCA 90 bp | TCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCATCTTTGGGGTCACTCTCGTGTaGGTTACTACCCTGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SFFFPVQSLEVGYAKSIFGVTLV*VTTLLQ Trigger: CTGAAGCAGGGTAGTAACCCACACGAGAGTGACCCC...AAAGATGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR GCA 90 bp | AAACAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGATCATCTGTGGTCTCTaGATGGTGTCCTGGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: KQVKMLPCLCRFFCRWRMIICGL*MVSWCG Trigger: ACCACACCAGGACACCATGCAGAGACCACAGATGAT...CATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031768.8 ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR CCA 90 bp | ATTAAACAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGACTCTGCATGGTGTCCTaGTGTGGTGAGGAATACCAG | + |
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Preference number: 4 (lower is better) Translates to: IKQVKMLPCLCRFFCRWRLCMVS*CGEEYQ Trigger: CTGGTATTCCTCACCACACCAGGACACCATGCAGAG...TCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTGTTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031768.8 ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR GCA 90 bp | ATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTCAGAATGTGGGTTACTACCCTaGTTCAGCAATTTCTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: MLPCLCRFFCRWRMSPSECGLLP*FSNFLN Trigger: GTTTAAGAAATTGCTGAAGCAGGGTAGTAACCCACA...TTCTGAAGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031768.8 ENSMUST00000171311.8 |
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| CDS-3UTR GCA 90 bp | CTTGGTCTTTCTTCTTTCCAGTTCAGAGTTTGGAGGTGGGTTATGCAAAGAGCATGTGGGTTACTACCCTaGTTCAGCAATTTCTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: LGLSSFQFRVWRWVMQRACGLLP*FSNFLN Trigger: GTTTAAGAAATTGCTGAAGCAGGGTAGTAACCCACA...TGCTCTTTGCATAACCCACCTCCAAACTCTGAACTGGAAAGAAGAAAGACCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR GCA 90 bp | CAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTTGTGGGTTACTACCCTaGTTCAGCAATTTCTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: QVKMLPCLCRFFCRWRMSCGLLP*FSNFLN Trigger: GTTTAAGAAATTGCTGAAGCAGGGTAGTAACCCACA...AGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031768.8 ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| 3UTR CAA 72 bp | AGAGTTTGGAGGTGGGTTATGCAAAGAGCATCTTTCTaGTTGCTGTTACTGTTTGTATTAGCTGAGTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RVWRWVMQRASF*LLLLFVLAELS Trigger: TGACAACTCAGCTAATACAAACAGTAACAGCAACAAGAAAGATGCTCTTTGCATAACCCACCTCCAAACTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS GCA 90 bp | CGCCGCCGCGGCCGAGTGCAAGCAGTGCAGAGGGTAATGTGCGCCTaGCATGGCCGGGGAGGTCTGCTGCGAGTGCGGCTGCGGCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: RRRGRVQAVQRVMCA*HGRGGLLRVRLRRR Trigger: CCGCCGCCGCAGCCGCACTCGCAGCAGACCTCCCCGGCCATGGCAGGCGCACATTACCCTCTGCACTGCTTGCACTCGGCCGCGGCGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 90 bp | GGCTCATGTAGGGGTAGGCGGCGAGCGATCGGTGGTTGTAGGAGTTaGCTCCGCTCGACGCGTAGGGCGAGCCGTGGTGGTGGTGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: GSCRGRRRAIGGCRS*LRSTRRASRGGGAG Trigger: ACCAGCACCACCACCACGGCTCGCCCTACGCGTCGAGCGGAGGCAACTCCTACAACCACCGATCGCTCGCCGCCTACCCCTACATGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS TCA 90 bp | GCTGCTGTTGTTGCTGCTGCTGCTGTTGCTGCTGCCCGAACTCCATaGAGGCGGATTTGGACGAGTCCTGGCCTTCCAAGCCGTCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: AAVVAAAAVAAARTP*RRIWTSPGLPSRQP Trigger: TGGCTGACGGCTTGGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 90 bp | GGCTGCTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGTTGTTaGTGCTGCTGCTGTTGCTGCTGCCCGAACTCCATGAAGGCGGAT | + |
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Preference number: 5 (lower is better) Translates to: GCCCCCCCCCCCCCC*CCCCCCCPNSMKAD Trigger: ATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 90 bp | TGCTGCTGTTGCTGCTGCTGTTGTTGCTGCTGCTGCTGTTGCTGCTaGCCGAACTCCATGAAGGCGGATTTGGACGAGTCCTGGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*PNSMKADLDESWPS Trigger: GGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 90 bp | TGCTGCTGCTGTTGCTGCTGCTGTTGTTGCTGCTGCTGCTGTTGCTaGTGCCCGAACTCCATGAAGGCGGATTTGGACGAGTCCTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*CPNSMKADLDESWP Trigger: AGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 90 bp | TGCTGCTGCTGCTGTTGCTGCTGCTGTTGTTGCTGCTGCTGCTGTTaGTGCTGCCCGAACTCCATGAAGGCGGATTTGGACGAGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*CCPNSMKADLDESW Trigger: CCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 90 bp | TGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGTTGTTGCTGCTGCTaGTGTTGCTGCTGCCCGAACTCCATGAAGGCGGATTTGGACGAG | + |
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Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*CCCCPNSMKADLDE Trigger: CTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAGCAGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS TCA 90 bp | AATACCAGTGTGAATACCCCGGCATGTAGCTGTTGGGAGGCATACTaGCGCCCTTGGCAGAGGCAGAAACGTCCCACACTGGAGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: NTSVNTPACSCWEAY*RPWQRQKRPTLEAG Trigger: CCCTGCCTCCAGTGTGGGACGTTTCTGCCTCTGCCAAGGGCGTCAGTATGCCTCCCAACAGCTACATGCCGGGGTATTCACACTGGTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031768.8 ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 90 bp | TGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGTTGTTGCTGCTaGTGCTGTTGCTGCTGCCCGAACTCCATGAAGGCGGATTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*CCCCCPNSMKADLD Trigger: GTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 90 bp | TGCTGTTGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGTTGTTGCTaGTGCTGCTGTTGCTGCTGCCCGAACTCCATGAAGGCGGATTTG | + |
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Preference number: 5 (lower is better) Translates to: CCCCCCCCCCCCCCC*CCCCCCPNSMKADL Trigger: CAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS-3UTR CAA 90 bp | GCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTCAGAAGCTCCGGCATACTGACGCCCTaGGCAGAGGCAGAAACGTCC | + |
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Preference number: 5 (lower is better) Translates to: AMFVQILLPVENVSFRSSGILTP*AEAETS Trigger: GGACGTTTCTGCCTCTGCCAAGGGCGTCAGTATGCC...GGAGCTTCTGAAGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031768.8 ENSMUST00000171311.8 |
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| CDS-3UTR CAA 90 bp | TGTTTGGCAGATACAACAGAGTCCTGGATCCTCCTTGCCTCCTTCAGAAGCTCCTCCATGAAGGCGGATTaGGACGAGTCCTGGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: CLADTTESWILLASFRSSSMKAD*DESWPS Trigger: GGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGA...GGAGCTTCTGAAGGAGGCAAGGAGGATCCAGGACTCTGTTGTATCTGCCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160937.9 |
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| CDS-3UTR CAA 90 bp | GCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTTCAGAAGCTCCTCCATGAAGGCGGATTaGGACGAGTCCTGGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: AMFVQILLPVENVSFRSSSMKAD*DESWPS Trigger: GGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGA...GGAGCTTCTGAAGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171311.8 |
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| CDS-3UTR CAA 90 bp | GTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCTCCTGGCATACTGACGCCCTaGGCAGAGGCAGAAACGTCC | + |
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Preference number: 5 (lower is better) Translates to: VKMLPCLCRFFCRWRMSPGILTP*AEAETS Trigger: GGACGTTTCTGCCTCTGCCAAGGGCGTCAGTATGCC...AGGAGACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031768.8 ENSMUST00000171311.8 |
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| CDS-3UTR CAA 90 bp | ACAAGTAAAAATGCTGCCATGTTTGTGCAGATTCTTCTGCCGGTGGAGAATGTCGGCATACTGACGCCCTaGGCAGAGGCAGAAACGTCC | + |
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Preference number: 5 (lower is better) Translates to: TSKNAAMFVQILLPVENVGILTP*AEAETS Trigger: GGACGTTTCTGCCTCTGCCAAGGGCGTCAGTATGCC...GACATTCTCCACCGGCAGAAGAATCTGCACAAACATGGCAGCATTTTTACTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031768.8 ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 72 bp | GGCCGAGTGCAAGCAGTGCAGAGGGTAATGTGCGCCTaGCATGGCCGGGGAGGTCTGCTGCGAGTGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GRVQAVQRVMCA*HGRGGLLRVRL Trigger: CAGCCGCACTCGCAGCAGACCTCCCCGGCCATGGCAGGCGCACATTACCCTCTGCACTGCTTGCACTCGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 72 bp | AGGGGTAGGCGGCGAGCGATCGGTGGTTGTAGGAGTTaGCTCCGCTCGACGCGTAGGGCGAGCCGTGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: RGRRRAIGGCRS*LRSTRRASRGG Trigger: ACCACCACGGCTCGCCCTACGCGTCGAGCGGAGGCAACTCCTACAACCACCGATCGCTCGCCGCCTACCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS CCA 72 bp | AGTGCAAGCAGTGCAGAGGGTAATGTGCGCCTGCCATaGCCGGGGAGGTCTGCTGCGAGTGCGGCTGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: SASSAEGNVRLP*PGRSAASAAAA Trigger: CGCCGCAGCCGCACTCGCAGCAGACCTCCCCGGCCATGGCAGGCGCACATTACCCTCTGCACTGCTTGCACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS TCA 72 bp | GTTGCTGCTGCTGCTGTTGCTGCTGCCCGAACTCCATaGAGGCGGATTTGGACGAGTCCTGGCCTTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: VAAAAVAAARTP*RRIWTSPGLPS Trigger: GCTTGGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS CAA 72 bp | TGCTGTTGCTGCTGCCCGAACTCCATGAAGGCGGATTaGGACGAGTCCTGGCCTTCCAAGCCGTCAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: CCCCCPNSMKAD*DESWPSKPSAI Trigger: GATGGCTGACGGCTTGGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS CAA 90 bp | TGCTGCTGCTGCTGTTGCTGCTGCCCGAACTCCATGAAGGCGGATTaGGACGAGTCCTGGCCTTCCAAGCCGTCAGCCATCGTAGTCATG | + |
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Preference number: 6 (lower is better) Translates to: CCCCCCCCPNSMKAD*DESWPSKPSAIVVM Trigger: CATGACTACGATGGCTGACGGCTTGGAAGGCCAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS CAA 90 bp | CTGCTGCTGCTGCTGTTGCTGCTGCTGTTGTTGCTGCTGCTGCTGTaGCTGCTGCCCGAACTCCATGAAGGCGGATTTGGACGAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LLLLLLLLLLLLLLL*LLPELHEGGFGRVL Trigger: CAGGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS TCA 72 bp | GTGAATACCCCGGCATGTAGCTGTTGGGAGGCATACTaGCGCCCTTGGCAGAGGCAGAAACGTCCCACACTG | + |
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Preference number: 6 (lower is better) Translates to: VNTPACSCWEAY*RPWQRQKRPTL Trigger: CAGTGTGGGACGTTTCTGCCTCTGCCAAGGGCGTCAGTATGCCTCCCAACAGCTACATGCCGGGGTATTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031768.8 ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 72 bp | TGCTGCTGCTGTTGTTGCTGCTGCTGCTGTTGCTGCTaGCCGAACTCCATGAAGGCGGATTTGGACGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: CCCCCCCCCCCC*PNSMKADLDES Trigger: GGACTCGTCCAAATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 72 bp | TGCTGCTGCTGTTGCTGCTGCTGTTGTTGCTGCTGCTaGTGTTGCTGCTGCCCGAACTCCATGAAGGCGGAT | + |
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Preference number: 6 (lower is better) Translates to: CCCCCCCCCCCC*CCCCPNSMKAD Trigger: ATCCGCCTTCATGGAGTTCGGGCAGCAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000160937.9 ENSMUST00000171311.8 |
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| CDS GCA 72 bp | CCCGGGAGGGGGTCACTCTCGTGTGGGTTACTACCCTaGTTCAGCAATTTCTTAAACTTAGAGCGCTTATTC | + |
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Preference number: 6 (lower is better) Translates to: PGRGSLSCGLLP*FSNFLNLERLF Trigger: GAATAAGCGCTCTAAGTTTAAGAAATTGCTGAAGCAGGGTAGTAACCCACACGAGAGTGACCCCCTCCCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031768.8 ENSMUST00000160937.9 ENSMUST00000171311.8 |
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