Pregenerated sensors for DLX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020871Ensembl transcript IDs: ENSMUST00000021241.8
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGAGAGCAGTTTCTTTGATCGAGGCAACAGCGAGGAGCTATGCCTaGACTGATCCTGGTAATCTGTTTGTCCCATTTCTCCTTCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: LRAVSLIEATARSYA*TDPGNLFVPFLLLG Trigger: GCCCAGAAGGAGAAATGGGACAAACAGATTACCAGGATCAGTGCAGGCATAGCTCCTCGCTGTTGCCTCGATCAAAGAAACTGCTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCCAACAACACAGACCCTGTGTCCACTTCTGGTTTTGTTCCTGGAAGGGCCAGAAGGGGAGCAGGTaGTCGGGTCCTGGGCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: GGQQHRPCVHFWFCSWKGQKGSR*SGPGLD Trigger: GTCAAGCCCAGGACCCGAGCACCTGCTCCCCTTCTG...GCCCTTCCAGGAACAAAACCAGAAGTGGACACAGGGTCTGTGTTGTTGGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR TCA 90 bp | GCTATGCCTGCACTGATCCTGGTAATCTGTTTGTCCCATTTCTCCTTCTGGGCTGGGGCTGCAGTCATTTaGAGGAGAGGGAGTGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: AMPALILVICLSHFSFWAGAAVI*RRGSGK Trigger: CTTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCC...AGCCCAGAAGGAGAAATGGGACAAACAGATTACCAGGATCAGTGCAGGCATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGGCCAACAACACAGACCCTGTGTCCACTTCTGGTTTTGTTCCTGGAAGGGGCTGTGCTTGGGGCTaGAGTCATTTGAAGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: MVANNTDPVSTSGFVPGRGCAWG*SHLKER Trigger: CCTCTCCTTCAAATGACTGCAGCCCCAAGCACAGCC...CCTTCCAGGAACAAAACCAGAAGTGGACACAGGGTCTGTGTTGTTGGCCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGGAGCTGGGGCCTTTTACATGTTAAACACTCACTCTACCACTGGGCCACCAGCCGTCCAAAGCCCCTaGTCTAACTCTCTGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: FGAGAFYMLNTHSTTGPPAVQSP*SNSLLW Trigger: CCAAAGCAGAGAGTTAGATCAGGGGCTTTGGACGGC...TGGTGGCCCAGTGGTAGAGTGAGTGTTTAACATGTAAAAGGCCCCAGCTCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCTGCAGTCATTTGAAGGAGAGGGAGTGGCAAGATTGTGGCCGTCCAAAGCTGAGAAAATCCATCTaGAGCTGGTTTCCTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: WGCSHLKEREWQDCGRPKLRKSI*SWFPLL Trigger: GAGGAGAGGAAACCAGCTCCAGATGGATTTTCTCAG...CTTTGGACGGCCACAATCTTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CCA 90 bp | GATTTGAGAGCAGTTTCTTTGATCGAGGCAACAGCGAGGAGCTATGCCTGCACTTTCTGGTTTTGTTCCTaGAAGGGCTGTCTGGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: DLRAVSLIEATARSYACTFWFCS*KGCLGP Trigger: GGGGCCCAGACAGCCCTTCCAGGAACAAAACCAGAA...AGTGCAGGCATAGCTCCTCGCTGTTGCCTCGATCAAAGAAACTGCTCTCAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGGGCTGTCTGGGCCCCCATGGTGCAGGCCAGGAATAATATTTGTTTTCAAATCCATCTGGAGCTaGTTTCCTCTCCTCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LEGLSGPPWCRPGIIFVFKSIWS*FPLLPE Trigger: TTCTGGGAGGAGAGGAAACCAGCTCCAGATGGATTT...GAAAACAAATATTATTCCTGGCCTGCACCATGGGGGCCCAGACAGCCCTTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGAGCTGGGGCCTTTTACATGTTAAACACTCACTCTACCACTGGGCCACCACCCTGTGTCCACTTCTaGTTTTGTTCCTGGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: FGAGAFYMLNTHSTTGPPPCVHF*FCSWKG Trigger: GCCCTTCCAGGAACAAAACCAGAAGTGGACACAGGG...TGGTGGCCCAGTGGTAGAGTGAGTGTTTAACATGTAAAAGGCCCCAGCTCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CCA 90 bp | GCTATGCCTGCACTGATCCTGGTAATCTGTTTGTCCCATTTCTCCTTCTGGGCTTCTAACTCTCTGCTTTaGAGAGCCAGGCTTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: AMPALILVICLSHFSFWASNSLL*RARLPH Trigger: GTGTGGAAGCCTGGCTCTCCAAAGCAGAGAGTTAGA...AGCCCAGAAGGAGAAATGGGACAAACAGATTACCAGGATCAGTGCAGGCATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR CAA 90 bp | CCGTTTAAAGCGGAGAAGCACAAGCTGCCCACAGGTCCACAAGTTTaGCTTTGGAGCTGGGGCCTTTTACATGTTAAACACTCACTCTAC | + |
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Preference number: 2 (lower is better) Translates to: PFKAEKHKLPTGPQV*LWSWGLLHVKHSLY Trigger: GTAGAGTGAGTGTTTAACATGTAAAAGGCCCCAGCTCCAAAGCAAAACTTGTGGACCTGTGGGCAGCTTGTGCTTCTCCGCTTTAAACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCCATTTCTCCTTCTGGGCTTCCAACAATGTGTGCAGGTGAACTTGTTAGGTCCTGATCTAACTCTCTaGTTTGGAGAGCCAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: VPFLLLGFQQCVQVNLLGPDLTL*FGEPGF Trigger: GAAGCCTGGCTCTCCAAAGCAGAGAGTTAGATCAGG...ACCTAACAAGTTCACCTGCACACATTGTTGGAAGCCCAGAAGGAGAAATGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CCA 90 bp | GCTATGCCTGCACTGATCCTGGTAATCTGTTTGTCCCATTTCTCCTTCTGGGCTGTTTTCTTCCTGGTTTaGATCCTAGGGCTGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: AMPALILVICLSHFSFWAVFFLV*ILGLCL Trigger: CAAGCACAGCCCTAGGATCCAAACCAGGAAGAAAAC...AGCCCAGAAGGAGAAATGGGACAAACAGATTACCAGGATCAGTGCAGGCATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR CAA 90 bp | GGAATAATATTTGTTTTCTTCCTGGTTTGGATCCTAGGGCTGTGCTaGGGGCTGCAGTCATTTGAAGGAGAGGGAGTGGCAAGATTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GIIFVFFLVWILGLC*GLQSFEGEGVARLW Trigger: CCACAATCTTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCAAGCACAGCCCTAGGATCCAAACCAGGAAGAAAACAAATATTATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTAAGGATGGAGAGTCGTGGGCCTAGGCTCTTAATACATACTGTTGAATTACAGGTCCACAAGTTTTaGTTTGGAGCTGGGGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: VLRMESRGPRLLIHTVELQVHKF*FGAGAF Trigger: AAAGGCCCCAGCTCCAAAGCAAAACTTGTGGACCTG...TAATTCAACAGTATGTATTAAGAGCCTAGGCCCACGACTCTCCATCCTTAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CCA 90 bp | GCTATGCCTGCACTGATCCTGGTAATCTGTTTGTCCCATTTCTCCTTCTGGGCTGCTATCAATTCAAAATaGGTAGATATGGCGCTAGAG | + |
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Preference number: 2 (lower is better) Translates to: AMPALILVICLSHFSFWAAINSK*VDMALE Trigger: CTCTAGCGCCATATCTACCCATTTTGAATTGATAGC...AGCCCAGAAGGAGAAATGGGACAAACAGATTACCAGGATCAGTGCAGGCATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCCATTTCTCCTTCTGGGCTTCCAACAATGTGTGCAGGTGAACTTGTTAGGTGGACGATTAAGCCCATaGCTATCAATTCAAAATGGG | + |
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Preference number: 2 (lower is better) Translates to: VPFLLLGFQQCVQVNLLGGRLSP*LSIQNG Trigger: CCCATTTTGAATTGATAGCCATGGGCTTAATCGTCC...ACCTAACAAGTTCACCTGCACACATTGTTGGAAGCCCAGAAGGAGAAATGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTATCAATTCAAAATGGGTAGATATGGCGCTAGAGAGCCGTTTAAAGCGGGTTTTGCTTTGGAGCTaGGGCCTTTTACATGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: MAINSKWVDMALESRLKRVLLWS*GLLHVK Trigger: TTTAACATGTAAAAGGCCCCAGCTCCAAAGCAAAAC...CCGCTTTAAACGGCTCTCTAGCGCCATATCTACCCATTTTGAATTGATAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CAA 90 bp | TGCTTGGGGCTGCAGTCATTTGAAGGAGAGGGAGTGGCAAGATTGTGGCCGTCCGCTCGGGTCCTGGGCTaGACAGGAGGGCTGAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: CLGLQSFEGEGVARLWPSARVLG*TGGLKS Trigger: AGACTTCAGCCCTCCTGTCAAGCCCAGGACCCGAGC...GGACGGCCACAATCTTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGTGGCCAACAACACAGACCCTGTGTCCACTTCTGGTTTTGTTCCTGGAAGGGAGGGAGTGGCAAGATaGTGGCCGTCCAAAGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: MVANNTDPVSTSGFVPGREGVAR*WPSKAP Trigger: AGGGGCTTTGGACGGCCACAATCTTGCCACTCCCTC...CCTTCCAGGAACAAAACCAGAAGTGGACACAGGGTCTGTGTTGTTGGCCACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR TCA 72 bp | AGAGGGAGTGGCAAGATTGTGGCCGTCCAAAGCCCCTaGTCTAACTCTCTGCTTTGGAGAGCCAGGCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: RGSGKIVAVQSP*SNSLLWRARLP Trigger: TGGAAGCCTGGCTCTCCAAAGCAGAGAGTTAGATCAGGGGCTTTGGACGGCCACAATCTTGCCACTCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR TCA 72 bp | TTGGATCCTAGGGCTGTGCTTGGGGCTGCAGTCATTTaGAGGAGAGGGAGTGGCAAGATTGTGGCCGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: LDPRAVLGAAVI*RRGSGKIVAVQ Trigger: TTGGACGGCCACAATCTTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCAAGCACAGCCCTAGGATCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR GCA 72 bp | GCGCTAGAGAGCCGTTTAAAGCGGAGAAGCACAAGCTaGCCACAGGTCCACAAGTTTTGCTTTGGAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ALESRLKRRSTS*PQVHKFCFGAG Trigger: CCCAGCTCCAAAGCAAAACTTGTGGACCTGTGGGCAGCTTGTGCTTCTCCGCTTTAAACGGCTCTCTAGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR GCA 72 bp | AGATTGTGGCCGTCCAAAGCCCCTGATCTAACTCTCTaGTTTGGAGAGCCAGGCTTCCACACCATTCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: RLWPSKAPDLTL*FGEPGFHTILS Trigger: GGAAAGAATGGTGTGGAAGCCTGGCTCTCCAAAGCAGAGAGTTAGATCAGGGGCTTTGGACGGCCACAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR CCA 72 bp | TCTCCTTCGGTGTCTTGTCTTCTGAGAAAATCCATCTaGAGCTGGTTTCCTCTCCTCCCAGAAGGGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SPSVSCLLRKSI*SWFPLLPEGEQ Trigger: CTGCTCCCCTTCTGGGAGGAGAGGAAACCAGCTCCAGATGGATTTTCTCAGAAGACAAGACACCGAAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGTGGCCAACAACACAGACCCTGTGTCCACTTCTGGTTTTGTTCCTGGAAGGATCCTAGGGCTGTGCTaGGGGCTGCAGTCATTTGAA | + |
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Preference number: 3 (lower is better) Translates to: MVANNTDPVSTSGFVPGRILGLC*GLQSFE Trigger: TTCAAATGACTGCAGCCCCAAGCACAGCCCTAGGAT...CCTTCCAGGAACAAAACCAGAAGTGGACACAGGGTCTGTGTTGTTGGCCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CAA 90 bp | GTCCCATTTCTCCTTCTGGGCTTCCAACAATGTGTGCAGGTGAACTTGTTAGGTTGGGGCTGCAGTCATTaGAAGGAGAGGGAGTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: VPFLLLGFQQCVQVNLLGWGCSH*KEREWQ Trigger: TTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCA...ACCTAACAAGTTCACCTGCACACATTGTTGGAAGCCCAGAAGGAGAAATGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR CCA 72 bp | CTGCAGTCATTTGAAGGAGAGGGAGTGGCAAGATTGTaGCCGTCCAAAGCCCCTGATCTAACTCTCTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LQSFEGEGVARL*PSKAPDLTLCF Trigger: AAAGCAGAGAGTTAGATCAGGGGCTTTGGACGGCCACAATCTTGCCACTCCCTCTCCTTCAAATGACTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CAA 90 bp | GTCCCATTTCTCCTTCTGGGCTTCCAACAATGTGTGCAGGTGAACTTGTTAGGTTGTCCACTTCTGGTTTaGTTCCTGGAAGGGCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: VPFLLLGFQQCVQVNLLGCPLLV*FLEGLS Trigger: AGACAGCCCTTCCAGGAACAAAACCAGAAGTGGACA...ACCTAACAAGTTCACCTGCACACATTGTTGGAAGCCCAGAAGGAGAAATGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR CCA 72 bp | AAGCTGCCCACAGGTCCACAAGTTTTGCTTTGGAGCTaGGGCCTTTTACATGTTAAACACTCACTCTACCAC | + |
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Preference number: 3 (lower is better) Translates to: KLPTGPQVLLWS*GLLHVKHSLYH Trigger: GTGGTAGAGTGAGTGTTTAACATGTAAAAGGCCCCAGCTCCAAAGCAAAACTTGTGGACCTGTGGGCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGTGGCCAACAACACAGACCCTGTGTCCACTTCTGGTTTTGTTCCTGGAAGGTTCTCCTTCGGTGTCTaGTCTTCTGAGAAAATCCAT | + |
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Preference number: 3 (lower is better) Translates to: MVANNTDPVSTSGFVPGRFSFGV*SSEKIH Trigger: ATGGATTTTCTCAGAAGACAAGACACCGAAGGAGAA...CCTTCCAGGAACAAAACCAGAAGTGGACACAGGGTCTGTGTTGTTGGCCACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR CCA 72 bp | ATATGGACGATTAAGCCCATGGCTATCAATTCAAAATaGGTAGATATGGCGCTAGAGAGCCGTTTAAAGCGG | + |
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Preference number: 3 (lower is better) Translates to: IWTIKPMAINSK*VDMALESRLKR Trigger: CCGCTTTAAACGGCTCTCTAGCGCCATATCTACCCATTTTGAATTGATAGCCATGGGCTTAATCGTCCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR TCA 90 bp | TGGGGCTGCAGTCATTTGAAGGAGAGGGAGTGGCAAGATTGTGGCCGTCCAAAGAGTTGTGCTGCCAGCTaGGCTCTCTCGGGCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: WGCSHLKEREWQDCGRPKSCAAS*ALSGRA Trigger: GGCCCTGCCCGAGAGAGCTCAGCTGGCAGCACAACT...CTTTGGACGGCCACAATCTTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR TCA 90 bp | TGCTTGGGGCTGCAGTCATTTGAAGGAGAGGGAGTGGCAAGATTGTGGCCGTCCTTACCTGGGTTTGGGTaGGTCCGAGTTGTGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CLGLQSFEGEGVARLWPSLPGFG*VRVVLP Trigger: TGGCAGCACAACTCGGACTCACCCAAACCCAGGTAA...GGACGGCCACAATCTTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR CCA 90 bp | TGGGGCTGCAGTCATTTGAAGGAGAGGGAGTGGCAAGATTGTGGCCGTCCAAAGGTGTGCTGGAAACGCTaGTTCAGGTGTTGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WGCSHLKEREWQDCGRPKVCWKR*FRCWSC Trigger: GCAGCTCCAACACCTGAACCAGCGTTTCCAGCACAC...CTTTGGACGGCCACAATCTTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR CCA 90 bp | GATTTGAGAGCAGTTTCTTTGATCGAGGCAACAGCGAGGAGCTATGCCTGCACTGTCAGGGACTGCTGCTaGGAGGGCACCAGAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: DLRAVSLIEATARSYACTVRDCC*EGTRDS Trigger: ACTGTCTCTGGTGCCCTCCCAGCAGCAGTCCCTGAC...AGTGCAGGCATAGCTCCTCGCTGTTGCCTCGATCAAAGAAACTGCTCTCAAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR CCA 90 bp | TGCTTGGGGCTGCAGTCATTTGAAGGAGAGGGAGTGGCAAGATTGTGGCCGTCCAGGTATTGGGTGTGCTaGAAACGCTGGTTCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: CLGLQSFEGEGVARLWPSRYWVC*KRWFRC Trigger: ACACCTGAACCAGCGTTTCCAGCACACCCAATACCT...GGACGGCCACAATCTTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR CCA 90 bp | TGGGGCTGCAGTCATTTGAAGGAGAGGGAGTGGCAAGATTGTGGCCGTCCAAAGTGTTGTCATAGCCACTaGAAGGCAGGGTGTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: WGCSHLKEREWQDCGRPKCCHSH*KAGCLP Trigger: AGGCAGACACCCTGCCTTCCAGTGGCTATGACAACA...CTTTGGACGGCCACAATCTTGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR GCA 90 bp | TTTGGAGCTGGGGCCTTTTACATGTTAAACACTCACTCTACCACTGGGCCACCACATCATCTGAGGCAGTaGCAGCACATCTGGGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: FGAGAFYMLNTHSTTGPPHHLRQ*QHIWGA Trigger: CGCTCCCCAGATGTGCTGGCACTGCCTCAGATGATG...TGGTGGCCCAGTGGTAGAGTGAGTGTTTAACATGTAAAAGGCCCCAGCTCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR TCA 90 bp | GCTATGCCTGCACTGATCCTGGTAATCTGTTTGTCCCATTTCTCCTTCTGGGCTCAGTGCCAGCTTCTCTaGTTCTGCTTCGAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: AMPALILVICLSHFSFWAQCQLL*FCFELL Trigger: CAGGAGCTCGAAGCAGAATCAGAGAAGCTGGCACTG...AGCCCAGAAGGAGAAATGGGACAAACAGATTACCAGGATCAGTGCAGGCATAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR GCA 90 bp | ATGGCTATCAATTCAAAATGGGTAGATATGGCGCTAGAGAGCCGTTTAAAGCGGCTGGTCAGGGACTGCTaGTGGGAGGGCACCAGAGAC | + |
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Preference number: 4 (lower is better) Translates to: MAINSKWVDMALESRLKRLVRDC*WEGTRD Trigger: GTCTCTGGTGCCCTCCCAGCAGCAGTCCCTGACCAG...CCGCTTTAAACGGCTCTCTAGCGCCATATCTACCCATTTTGAATTGATAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR CAA 72 bp | TTTGTTTTCTTCCTGGTTTGGATCCTAGGGCTGTGCTaGGGGCTGCAGTCATTTGAAGGAGAGGGAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: FVFFLVWILGLC*GLQSFEGEGVA Trigger: TGCCACTCCCTCTCCTTCAAATGACTGCAGCCCCAAGCACAGCCCTAGGATCCAAACCAGGAAGAAAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR CAA 72 bp | CGAGGAGCTATGCCTGCACTGATCCTGGTAATCTGTTaGTCCCATTTCTCCTTCTGGGCTTCCAACAATGTG | + |
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Preference number: 4 (lower is better) Translates to: RGAMPALILVIC*SHFSFWASNNV Trigger: CACATTGTTGGAAGCCCAGAAGGAGAAATGGGACAAACAGATTACCAGGATCAGTGCAGGCATAGCTCCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR CCA 90 bp | ATGGCTATCAATTCAAAATGGGTAGATATGGCGCTAGAGAGCCGTTTAAAGCGGAACCAGATCTTTACCTaGGTTTGGGTGAGTCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: MAINSKWVDMALESRLKRNQIFT*VWVSPS Trigger: ACTCGGACTCACCCAAACCCAGGTAAAGATCTGGTT...CCGCTTTAAACGGCTCTCTAGCGCCATATCTACCCATTTTGAATTGATAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| 3UTR CAA 72 bp | TACATTTTAATAGCTTGTGATTTGAGAGCAGTTTCTTaGATCGAGGCAACAGCGAGGAGCTATGCCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: YILIACDLRAVS*IEATARSYACT Trigger: AGTGCAGGCATAGCTCCTCGCTGTTGCCTCGATCAAAGAAACTGCTCTCAAATCACAAGCTATTAAAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS CCA 90 bp | AGATGGCGCCACCAATTGTTGCTGGCGGGGCAGGTAGGAGTCTCCTaGGGTTGCCGGCCCAGGGTGGGAATAGGACCGGGGGTGGCCGTA | + |
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Preference number: 5 (lower is better) Translates to: RWRHQLLLAGQVGVS*GCRPRVGIGPGVAV Trigger: TACGGCCACCCCCGGTCCTATTCCCACCCTGGGCCGGCAACCCCAGGAGACTCCTACCTGCCCCGCCAGCAACAATTGGTGGCGCCATCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS CCA 90 bp | TTCGAGCTCCTGCGGGTGTTCAGCCGGCCTGTGAAAGGGCTGAGATaGCGCCACCAATTGTTGCTGGCGGGGCAGGTAGGAGTCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: FELLRVFSRPVKGLR*RHQLLLAGQVGVSW Trigger: CCAGGAGACTCCTACCTGCCCCGCCAGCAACAATTGGTGGCGCCATCTCAGCCCTTTCACAGGCCGGCTGAACACCCGCAGGAGCTCGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS TCA 90 bp | CAGGGACTGCTGCTGGGAGGGCACCAGAGACAGTGCCAGCTTCTCTaGTTCTGCTTCGAGCTCCTGCGGGTGTTCAGCCGGCCTGTGAAA | + |
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Preference number: 5 (lower is better) Translates to: QGLLLGGHQRQCQLL*FCFELLRVFSRPVK Trigger: TTTCACAGGCCGGCTGAACACCCGCAGGAGCTCGAAGCAGAATCAGAGAAGCTGGCACTGTCTCTGGTGCCCTCCCAGCAGCAGTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS TCA 90 bp | CAGATCTTTACCTGGGTTTGGGTGAGTCCGAGTTGTGCTGCCAGCTaGGCTCTCTCGGGCAGGGCCAGGTATTGGGTGTGCTGGAAACGC | + |
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Preference number: 5 (lower is better) Translates to: QIFTWVWVSPSCAAS*ALSGRARYWVCWKR Trigger: GCGTTTCCAGCACACCCAATACCTGGCCCTGCCCGAGAGAGCTCAGCTGGCAGCACAACTCGGACTCACCCAAACCCAGGTAAAGATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR CAA 90 bp | CTGGAAGGGCTGTCTGGGCCCCCATGGTGCAGGCCAGGAATAATATTTGTTTTCAGGAGTCTCCTGGGGTaGCCGGCCCAGGGTGGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LEGLSGPPWCRPGIIFVFRSLLG*PAQGGN Trigger: ATTCCCACCCTGGGCCGGCAACCCCAGGAGACTCCT...GAAAACAAATATTATTCCTGGCCTGCACCATGGGGGCCCAGACAGCCCTTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR CAA 90 bp | GGTGGCCAACAACACAGACCCTGTGTCCACTTCTGGTTTTGTTCCTGGAAGGGCGGGCAGGGCCAGGTATaGGGTGTGCTGGAAACGCTG | + |
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Preference number: 5 (lower is better) Translates to: GGQQHRPCVHFWFCSWKGGQGQV*GVLETL Trigger: CAGCGTTTCCAGCACACCCAATACCTGGCCCTGCCC...GCCCTTCCAGGAACAAAACCAGAAGTGGACACAGGGTCTGTGTTGTTGGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR CAA 90 bp | GCTATGCCTGCACTGATCCTGGTAATCTGTTTGTCCCATTTCTCCTTCTGGGCTTTGGGTGAGTCCGAGTaGTGCTGCCAGCTGAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: AMPALILVICLSHFSFWALGESE*CCQLSS Trigger: AGAGCTCAGCTGGCAGCACAACTCGGACTCACCCAA...AGCCCAGAAGGAGAAATGGGACAAACAGATTACCAGGATCAGTGCAGGCATAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS-3UTR CAA 90 bp | GATTTGAGAGCAGTTTCTTTGATCGAGGCAACAGCGAGGAGCTATGCCTGCACTACGCTGGTTCAGGTGTaGGAGCTGCAGGCTAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: DLRAVSLIEATARSYACTTLVQV*ELQARV Trigger: TACTCTAGCCTGCAGCTCCAACACCTGAACCAGCGT...AGTGCAGGCATAGCTCCTCGCTGTTGCCTCGATCAAAGAAACTGCTCTCAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS CCA 72 bp | CCGACAGGGCGGGGGCGAGGTCCGGGAAGACAACGTTaGAGGCACCACGGTCAGGAAGGGGACAGGGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: PTGRGRGPGRQR*RHHGQEGDRVK Trigger: CTTTACCCTGTCCCCTTCCTGACCGTGGTGCCTCCAACGTTGTCTTCCCGGACCTCGCCCCCGCCCTGTCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS CCA 72 bp | CACCAATTGTTGCTGGCGGGGCAGGTAGGAGTCTCCTaGGGTTGCCGGCCCAGGGTGGGAATAGGACCGGGG | + |
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Preference number: 6 (lower is better) Translates to: HQLLLAGQVGVS*GCRPRVGIGPG Trigger: CCCCGGTCCTATTCCCACCCTGGGCCGGCAACCCCAGGAGACTCCTACCTGCCCCGCCAGCAACAATTGGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS CAA 90 bp | GTGTTCAGCCGGCCTGTGAAAGGGCTGAGATGGCGCCACCAATTGTaGCTGGCGGGGCAGGTAGGAGTCTCCTGGGGTTGCCGGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VFSRPVKGLRWRHQL*LAGQVGVSWGCRPR Trigger: CCTGGGCCGGCAACCCCAGGAGACTCCTACCTGCCCCGCCAGCAACAATTGGTGGCGCCATCTCAGCCCTTTCACAGGCCGGCTGAACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS CCA 72 bp | CTGCGGGTGTTCAGCCGGCCTGTGAAAGGGCTGAGATaGCGCCACCAATTGTTGCTGGCGGGGCAGGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: LRVFSRPVKGLR*RHQLLLAGQVG Trigger: TCCTACCTGCCCCGCCAGCAACAATTGGTGGCGCCATCTCAGCCCTTTCACAGGCCGGCTGAACACCCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS CAA 72 bp | CGGCCTGTGAAAGGGCTGAGATGGCGCCACCAATTGTaGCTGGCGGGGCAGGTAGGAGTCTCCTGGGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: RPVKGLRWRHQL*LAGQVGVSWGC Trigger: GCAACCCCAGGAGACTCCTACCTGCCCCGCCAGCAACAATTGGTGGCGCCATCTCAGCCCTTTCACAGGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS TCA 72 bp | CTGCTGGGAGGGCACCAGAGACAGTGCCAGCTTCTCTaGTTCTGCTTCGAGCTCCTGCGGGTGTTCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: LLGGHQRQCQLL*FCFELLRVFSR Trigger: CCGGCTGAACACCCGCAGGAGCTCGAAGCAGAATCAGAGAAGCTGGCACTGTCTCTGGTGCCCTCCCAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS TCA 72 bp | ACCTGGGTTTGGGTGAGTCCGAGTTGTGCTGCCAGCTaGGCTCTCTCGGGCAGGGCCAGGTATTGGGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: TWVWVSPSCAAS*ALSGRARYWVC Trigger: GCACACCCAATACCTGGCCCTGCCCGAGAGAGCTCAGCTGGCAGCACAACTCGGACTCACCCAAACCCAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS GCA 72 bp | GTTCTGGGCTTGCGCAGCTTCCTGGTCAGGGACTGCTaGTGGGAGGGCACCAGAGACAGTGCCAGCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VLGLRSFLVRDC*WEGTRDSASFS Trigger: AGAGAAGCTGGCACTGTCTCTGGTGCCCTCCCAGCAGCAGTCCCTGACCAGGAAGCTGCGCAAGCCCAGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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| CDS GCA 72 bp | ATGGTTCTGGGCTTGCGCAGCTTCCTGGTCAGGGACTaGTGCTGGGAGGGCACCAGAGACAGTGCCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: MVLGLRSFLVRD*CWEGTRDSASF Trigger: GAAGCTGGCACTGTCTCTGGTGCCCTCCCAGCAGCAGTCCCTGACCAGGAAGCTGCGCAAGCCCAGAACCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021241.8 |
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