Pregenerated sensors for DLX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041911Ensembl transcript IDs: ENSMUST00000037119.4, ENSMUST00000145444.2, ENSMUST00000152711.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGGGGACGTAGGAGCCAGCGCTGCTGCCGGAGCCCTTCCCAGATaGGGAGTTCGGATTCCAGCCGGGTGGTACCGGTGGGGAGCCGGC | + |
|
Preference number: 1 (lower is better) Translates to: AGDVGASAAAGALPR*GVRIPAGWYRWGAG Trigger: GCCGGCTCCCCACCGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAAGGGCTCCGGCAGCAGCGCTGGCTCCTACGTCCCCAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR CCA 90 bp | CTGGTCCGGTCCAGCGGGTTATCTTGTGGCACTGGCTGTCTCCAGTaGCTGTGCCTGCGCTTTGAGGCCACTCTGCTGTTCACCGTGGCC | + |
|
Preference number: 1 (lower is better) Translates to: LVRSSGLSCGTGCLQ*LCLRFEATLLFTVA Trigger: GGCCACGGTGAACAGCAGAGTGGCCTCAAAGCGCAGGCACAGCCACTGGAGACAGCCAGTGCCACAAGATAACCCGCTGGACCGGACCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR GCA 90 bp | AGGGATACCATGATGTATAGCTGGGGACGTAGGAGCCAGCGCTGCTaGCGGAGCCCTTCCCAGATGAGGAGTTCGGATTCCAGCCGGGTG | + |
|
Preference number: 1 (lower is better) Translates to: RDTMMYSWGRRSQRC*RSPSQMRSSDSSRV Trigger: CACCCGGCTGGAATCCGAACTCCTCATCTGGGAAGGGCTCCGGCAGCAGCGCTGGCTCCTACGTCCCCAGCTATACATCATGGTATCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR GCA 90 bp | CTGAGGGATACCATGATGTATAGCTGGGGACGTAGGAGCCAGCGCTaGTGCCGGAGCCCTTCCCAGATGAGGAGTTCGGATTCCAGCCGG | + |
|
Preference number: 1 (lower is better) Translates to: LRDTMMYSWGRRSQR*CRSPSQMRSSDSSR Trigger: CCGGCTGGAATCCGAACTCCTCATCTGGGAAGGGCTCCGGCAGCAGCGCTGGCTCCTACGTCCCCAGCTATACATCATGGTATCCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR TCA 90 bp | GTTATCTTGTGGCACTGGCTGTCTCCAGTGGCTGTGCCTGCGCTTTaGGGCCACTCTGCTGTTCACCGTGGCCCAAACCAGATTCGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: VILWHWLSPVAVPAL*GHSAVHRGPNQIRA Trigger: AGCCCGAATCTGGTTTGGGCCACGGTGAACAGCAGAGTGGCCTCAAAGCGCAGGCACAGCCACTGGAGACAGCCAGTGCCACAAGATAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR TCA 90 bp | TTTTGGAGAGGTCGTAGAATGAGGACAGCAGACACACGAGGACCTTaGCTTCGGCGCACAGACAGTGCAAAAAGGAGACAAAGACGGACA | + |
|
Preference number: 1 (lower is better) Translates to: FWRGRRMRTADTRGP*LRRTDSAKRRQRRT Trigger: TGTCCGTCTTTGTCTCCTTTTTGCACTGTCTGTGCGCCGAAGTCAAGGTCCTCGTGTGTCTGCTGTCCTCATTCTACGACCTCTCCAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR GCA 90 bp | GCCCGTGCATTCAGGGTGATGACTTGTGTTCTGTGGTCGAGCCGCTaGTTGTGTCTTACTTTAAAGCGACCTGGAATTGGGGTGCTTTTA | + |
|
Preference number: 1 (lower is better) Translates to: ARAFRVMTCVLWSSR*LCLTLKRPGIGVLL Trigger: TAAAAGCACCCCAATTCCAGGTCGCTTTAAAGTAAGACACAAGCAGCGGCTCGACCACAGAACACAAGTCATCACCCTGAATGCACGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR GCA 90 bp | GGACAAATTATTTTCTCTCCAAGGCTCATTGGTCCTCTCTCTTGCTaGCCAAAGTATGATTTTTCTTCTTGGCCAGGTGTTCTTGTCCAA | + |
|
Preference number: 1 (lower is better) Translates to: GQIIFSPRLIGPLSC*PKYDFSSWPGVLVQ Trigger: TTGGACAAGAACACCTGGCCAAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAGAGAAAATAATTTGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR CCA 90 bp | CTCATTGGTCCTCTCTCTTGCTGCCCAAAGTATGATTTTTCTTCTTaGCCAGGTGTTCTTGTCCAAACGTTTTTGACAACATCCTATTGG | + |
|
Preference number: 1 (lower is better) Translates to: LIGPLSCCPKYDFSS*PGVLVQTFLTTSYW Trigger: CCAATAGGATGTTGTCAAAAACGTTTGGACAAGAACACCTGGCCAAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGCCGGAGCCCTTCCCAGATGAGGAGTTCGGATTCCAGCCGGGTGGTACCGGCTGCCCTCCAGAGCTaGCCCGCCTTGCTTCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: CCRSPSQMRSSDSSRVVPAALQS*PALLHQ Trigger: CTGATGAAGCAAGGCGGGGCAGCTCTGGAGGGCAGC...CGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAAGGGCTCCGGCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCGGTGGGGAGCCGGCAGACAAGGCTCTGCCGTTCGCCAGCGCGCTGCCCTCCAACCATATCTTGACCTaGGTCTGTGTGAGTCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: TGGEPADKALPFASALPSNHILT*VCVSPK Trigger: CTTGGGACTCACACAGACGCAGGTCAAGATATGGTT...GGAGGGCAGCGCGCTGGCGAACGGCAGAGCCTTGTCTGCCGGCTCCCCACCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR-3UTR TCA 90 bp | CCGTTCGCCAGCGCGCTGCCCTCCAGAGCTGCCCCGCCTTGCTTCATCAGCTTCGGCAGAGCTAAGTACTaGGTTTGTTGGAACCTCCGG | + |
|
Preference number: 2 (lower is better) Translates to: PFASALPSRAAPPCFISFGRAKY*VCWNLR Trigger: CCGGAGGTTCCAACAAACTCAGTACTTAGCTCTGCC...GAAGCTGATGAAGCAAGGCGGGGCAGCTCTGGAGGGCAGCGCGCTGGCGAACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCAGATGAGGAGTTCGGATTCCAGCCGGGTGGTACCGGTGGGGAGCCGGCAAGAGCTGCCCCGCCTTaGTTCATCAGCTTCTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: FPDEEFGFQPGGTGGEPARAAPP*FISFLN Trigger: GTTCAAGAAGCTGATGAAGCAAGGCGGGGCAGCTCT...TGCCGGCTCCCCACCGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGCCGGCAGACCGGTGTGGCTCAGACCTGGTGACTTTTTGGAGAGGTCGTAGAGCTTTGAGGCCACTCTaGTGTTCACCGTGGCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LPADRCGSDLVTFWRGRRALRPL*CSPWPK Trigger: TTTGGGCCACGGTGAACAGCAGAGTGGCCTCAAAGC...TCTACGACCTCTCCAAAAAGTCACCAGGTCTGAGCCACACCGGTCTGCCGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR TCA 90 bp | CCCTCTTCTGGTGTGTTTAAGGTAAATAGTATGTTTGGACAGCGCCCACTCCATGTGCGAAAAGGTGGATaGACCTGGAGGCGGGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PSSGVFKVNSMFGQRPLHVRKGG*TWRREG Trigger: CCCCTCCCGCCTCCAGGTTCATCCACCTTTTCGCAC...ATGGAGTGGGCGCTGTCCAAACATACTATTTACCTTAAACACACCAGAAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR GCA 90 bp | CTCCAAGGCTCATTGGTCCTCTCTCTTGCTGCCCAAAGTATGATTTTTCTTCTTTCCAGTGGCTGTGCCTaGGCTTTGAGGCCACTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LQGSLVLSLAAQSMIFLLSSGCA*ALRPLC Trigger: GCAGAGTGGCCTCAAAGCGCAGGCACAGCCACTGGA...AAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR CCA 90 bp | CTCATTTCACAAAGCATCGGGTTTACAGCCACACACAACAGAACGGAAAGAGGCCTCTCCAAGGCTCATTaGTCCTCTCTCTTGCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: LISQSIGFTATHNRTERGLSKAH*SSLLLP Trigger: GGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAGAG...GCCTCTTTCCGTTCTGTTGTGTGTGGCTGTAAACCCGATGCTTTGTGAAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR CCA 90 bp | AAATGCACGGCATCCTGTTTTCCCTTTCTGCATTTCAGCCAAGTACAAAAGTTAGGGCTCTTCTCCTCCTaGCCCAGGGCGTGCGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: KCTASCFPFLHFSQVQKLGLFSS*PRACEK Trigger: CTTTTCGCACGCCCTGGGCCAGGAGGAGAAGAGCCC...TAACTTTTGTACTTGGCTGAAATGCAGAAAGGGAAAACAGGATGCCGTGCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR CAA 90 bp | CGTGCATTCAGGGTGATGACTTGTGTTCTGTGGTCGAGCCGCTGCTaGTGTCTTACTTTAAAGCGACCTGGAATTGGGGTGCTTTTACAT | + |
|
Preference number: 2 (lower is better) Translates to: RAFRVMTCVLWSSRC*CLTLKRPGIGVLLH Trigger: ATGTAAAAGCACCCCAATTCCAGGTCGCTTTAAAGTAAGACACAAGCAGCGGCTCGACCACAGAACACAAGTCATCACCCTGAATGCACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR TCA 90 bp | CACACAACAGAACGGAAAGAGGCTAAGCTTGTGCAACATGTTTACAGAACAATAGCTGTGCCTGCGCTTTaGGGCCACTCTGCTGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: HTTERKEAKLVQHVYRTIAVPAL*GHSAVH Trigger: GTGAACAGCAGAGTGGCCTCAAAGCGCAGGCACAGC...TATTGTTCTGTAAACATGTTGCACAAGCTTAGCCTCTTTCCGTTCTGTTGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR CCA 90 bp | CACACAACAGAACGGAAAGAGGCTAAGCTTGTGCAACATGTTTACAGAACAATAGGGCGTGCGAAAAGGTaGATGAACCTGGAGGCGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HTTERKEAKLVQHVYRTIGRAKR*MNLEAG Trigger: TCCCGCCTCCAGGTTCATCCACCTTTTCGCACGCCC...TATTGTTCTGTAAACATGTTGCACAAGCTTAGCCTCTTTCCGTTCTGTTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTGGTGTGTTTAAGGTAAATAGTATGTTTGGACAGCGCCCACTCCATGTCCAGCGGGTTATCTTGTaGCACTGGCTGTCTCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SSGVFKVNSMFGQRPLHVQRVIL*HWLSPV Trigger: CACTGGAGACAGCCAGTGCCACAAGATAACCCGCTG...GACATGGAGTGGGCGCTGTCCAAACATACTATTTACCTTAAACACACCAGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR GCA 90 bp | CACACAACAGAACGGAAAGAGGCTAAGCTTGTGCAACATGTTTACAGAACAATATGTCTCCAGTGGCTGTaGCTGCGCTTTGAGGCCACT | + |
|
Preference number: 2 (lower is better) Translates to: HTTERKEAKLVQHVYRTICLQWL*LRFEAT Trigger: AGTGGCCTCAAAGCGCAGGCACAGCCACTGGAGACA...TATTGTTCTGTAAACATGTTGCACAAGCTTAGCCTCTTTCCGTTCTGTTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR GCA 90 bp | AAGGACAAATTATTTTCTCTCCAAGGCTCATTGGTCCTCTCTCTTGCTGCCCAATCGGCGCACAGACAGTaGAAAAAGGAGACAAAGACG | + |
|
Preference number: 2 (lower is better) Translates to: KDKLFSLQGSLVLSLAAQSAHRQ*KKETKT Trigger: CGTCTTTGTCTCCTTTTTGCACTGTCTGTGCGCCGA...TTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAGAGAAAATAATTTGTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGAGAATTTGGAATTGGCCAACACTCAGCGTCAGATGAAGTCTGTTTTTCAAAGCAGCAAGCCCTCTaGCTTCACTGTTCCTTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: PREFGIGQHSASDEVCFSKQQAL*LHCSFF Trigger: GAAAAAGGAACAGTGAAGGCAGAGGGCTTGCTGCTT...TGAAAAACAGACTTCATCTGACGCTGAGTGTTGGCCAATTCCAAATTCTCTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR CCA 90 bp | CACACAACAGAACGGAAAGAGGCTAAGCTTGTGCAACATGTTTACAGAACAATACAGAGAATTTGGAATTaGCCAACACTCAGCGTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: HTTERKEAKLVQHVYRTIQRIWN*PTLSVR Trigger: TCTGACGCTGAGTGTTGGCCAATTCCAAATTCTCTG...TATTGTTCTGTAAACATGTTGCACAAGCTTAGCCTCTTTCCGTTCTGTTGTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR CCA 90 bp | AAATGCACGGCATCCTGTTTTCCCTTTCTGCATTTCAGCCAAGTACAAAAGTTAATGTCCCAGAGAATTTaGAATTGGCCAACACTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: KCTASCFPFLHFSQVQKLMSQRI*NWPTLS Trigger: GCTGAGTGTTGGCCAATTCCAAATTCTCTGGGACAT...TAACTTTTGTACTTGGCTGAAATGCAGAAAGGGAAAACAGGATGCCGTGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR TCA 90 bp | CTCCAAGGCTCATTGGTCCTCTCTCTTGCTGCCCAAAGTATGATTTTTCTTCTTACACTCAGCGTCAGATaGAGTCTGTTTTTCAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: LQGSLVLSLAAQSMIFLLTLSVR*SLFFNK Trigger: TTTATTGAAAAACAGACTTCATCTGACGCTGAGTGT...AAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR GCA 90 bp | CACACAACAGAACGGAAAGAGGCTAAGCTTGTGCAACATGTTTACAGAACAATAGTACAAAAGTTACTGTaGACCTTAAAAGTCACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: HTTERKEAKLVQHVYRTIVQKLL*TLKVTF Trigger: GAAAGTGACTTTTAAGGTGCACAGTAACTTTTGTAC...TATTGTTCTGTAAACATGTTGCACAAGCTTAGCCTCTTTCCGTTCTGTTGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR GCA 72 bp | AGCCGGCAGACAAGGCTCTGCCGTTCGCCAGCGCGCTaGCCTCCAGAGCTGCCCCGCCTTGCTTCATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRQTRLCRSPAR*PPELPRLASSA Trigger: AGCTGATGAAGCAAGGCGGGGCAGCTCTGGAGGGCAGCGCGCTGGCGAACGGCAGAGCCTTGTCTGCCGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR TCA 72 bp | GTAGGAGCCAGCGCTGCTGCCGGAGCCCTTCCCAGATaGGGAGTTCGGATTCCAGCCGGGTGGTACCGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VGASAAAGALPR*GVRIPAGWYRW Trigger: CCACCGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAAGGGCTCCGGCAGCAGCGCTGGCTCCTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR CCA 72 bp | CTTCTTGGTGCGCTGAGGGATACCATGATGTATAGCTaGGGACGTAGGAGCCAGCGCTGCTGCCGGAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLGALRDTMMYS*GRRSQRCCRSP Trigger: AGGGCTCCGGCAGCAGCGCTGGCTCCTACGTCCCCAGCTATACATCATGGTATCCCTCAGCGCACCAAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR GCA 72 bp | ATGATGTATAGCTGGGGACGTAGGAGCCAGCGCTGCTaGCGGAGCCCTTCCCAGATGAGGAGTTCGGATTCC | + |
|
Preference number: 3 (lower is better) Translates to: MMYSWGRRSQRC*RSPSQMRSSDS Trigger: GGAATCCGAACTCCTCATCTGGGAAGGGCTCCGGCAGCAGCGCTGGCTCCTACGTCCCCAGCTATACATCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR GCA 72 bp | ACCATGATGTATAGCTGGGGACGTAGGAGCCAGCGCTaGTGCCGGAGCCCTTCCCAGATGAGGAGTTCGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TMMYSWGRRSQR*CRSPSQMRSSD Trigger: ATCCGAACTCCTCATCTGGGAAGGGCTCCGGCAGCAGCGCTGGCTCCTACGTCCCCAGCTATACATCATGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| 3UTR CCA 72 bp | TCCAGCGGGTTATCTTGTGGCACTGGCTGTCTCCAGTaGCTGTGCCTGCGCTTTGAGGCCACTCTGCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSGLSCGTGCLQ*LCLRFEATLLF Trigger: GAACAGCAGAGTGGCCTCAAAGCGCAGGCACAGCCACTGGAGACAGCCAGTGCCACAAGATAACCCGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR CCA 72 bp | CCGGCAGACCGGTGTGGCTCAGACCTGGTGACTTTTTaGAGAGGTCGTAGAATGAGGACAGCAGACACACGA | + |
|
Preference number: 3 (lower is better) Translates to: PADRCGSDLVTF*RGRRMRTADTR Trigger: TCGTGTGTCTGCTGTCCTCATTCTACGACCTCTCCAAAAAGTCACCAGGTCTGAGCCACACCGGTCTGCCGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR TCA 72 bp | GGTCGTAGAATGAGGACAGCAGACACACGAGGACCTTaGCTTCGGCGCACAGACAGTGCAAAAAGGAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: GRRMRTADTRGP*LRRTDSAKRRQ Trigger: TTGTCTCCTTTTTGCACTGTCTGTGCGCCGAAGTCAAGGTCCTCGTGTGTCTGCTGTCCTCATTCTACGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTTCACAAAGCATCGGGTTTACAGCCACACACAACAGAACGGAAAGAGGCTGGTCGAGCCGCTGCTaGTGTCTTACTTTAAAGCGA | + |
|
Preference number: 3 (lower is better) Translates to: LISQSIGFTATHNRTERGWSSRC*CLTLKR Trigger: TCGCTTTAAAGTAAGACACAAGCAGCGGCTCGACCA...GCCTCTTTCCGTTCTGTTGTGTGTGGCTGTAAACCCGATGCTTTGTGAAATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTTCACAAAGCATCGGGTTTACAGCCACACACAACAGAACGGAAAGAGGCCATGTCCCAGAGAATTaGGAATTGGCCAACACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LISQSIGFTATHNRTERGHVPEN*ELANTQ Trigger: CTGAGTGTTGGCCAATTCCAAATTCTCTGGGACATG...GCCTCTTTCCGTTCTGTTGTGTGTGGCTGTAAACCCGATGCTTTGTGAAATGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCTTCTGGTGTGTTTAAGGTAAATAGTATGTTTGGACAGCGCCCACTCCATCCCCCTCCTACGTATTaGTTTTTCCTGATAGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PSSGVFKVNSMFGQRPLHPPPTY*FFLIVS Trigger: TGAGACTATCAGGAAAAACAAATACGTAGGAGGGGG...ATGGAGTGGGCGCTGTCCAAACATACTATTTACCTTAAACACACCAGAAGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR GCA 72 bp | ATTTTCTCTCCAAGGCTCATTGGTCCTCTCTCTTGCTaGCCAAAGTATGATTTTTCTTCTTGGCCAGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: IFSPRLIGPLSC*PKYDFSSWPGV Trigger: AACACCTGGCCAAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAGAGAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR GCA 72 bp | ATTATTTTCTCTCCAAGGCTCATTGGTCCTCTCTCTTaGTGCCCAAAGTATGATTTTTCTTCTTGGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: IIFSPRLIGPLS*CPKYDFSSWPG Trigger: ACCTGGCCAAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAGAGAAAATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR GCA 72 bp | ATAATAACAACAATAATATGTACAGCAATTAGATCTTaGACCAGAGCCCGTGCATTCAGGGTGATGACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: IITTIICTAIRS*TRARAFRVMTC Trigger: ACAAGTCATCACCCTGAATGCACGGGCTCTGGTGCAAGATCTAATTGCTGTACATATTATTGTTGTTATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR CCA 72 bp | GGTGTTCTTGTCCAAACGTTTTTGACAACATCCTATTaGTTTTACATATCTTACTTCCTTACTTCGGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GVLVQTFLTTSY*FYISYFLTSVF Trigger: AAAGACCGAAGTAAGGAAGTAAGATATGTAAAACCAATAGGATGTTGTCAAAAACGTTTGGACAAGAACACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR GCA 90 bp | CCGTTCGCCAGCGCGCTGCCCTCCAGAGCTGCCCCGCCTTGCTTCATCAGCTTCGGGCGAGGCTGGCGCTaGCGGGGTAGGACTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PFASALPSRAAPPCFISFGRGWR*RGRTAR Trigger: CCGTGCAGTCCTACCCCGGCAGCGCCAGCCTCGCCC...GAAGCTGATGAAGCAAGGCGGGGCAGCTCTGGAGGGCAGCGCGCTGGCGAACGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCAGATGAGGAGTTCGGATTCCAGCCGGGTGGTACCGGTGGGGAGCCGGTCCTCCAGGCGGCTCTaGGCGAGGCTGGCGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PSQMRSSDSSRVVPVGSRSSRRL*ARLALP Trigger: CGGCAGCGCCAGCCTCGCCCAGAGCCGCCTGGAGGA...CCGGCTCCCCACCGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTACCGGTGGGGAGCCGGCAGACAAGGCTCTGCCGTTCGCCAGCGCGCTGCCGGTCGGGAGAAGGATaGGGCCGAACTGTAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VVPVGSRQTRLCRSPARCRSGEG*GRTVGT Trigger: GGTGCCTACAGTTCGGCCTCATCCTTCTCCCGACCG...GCAGCGCGCTGGCGAACGGCAGAGCCTTGTCTGCCGGCTCCCCACCGGTACCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR TCA 90 bp | GTGGTACCGGTGGGGAGCCGGCAGACAAGGCTCTGCCGTTCGCCAGCGCGCTGCCCGACACGGGGCTGTTaGGACTTTCTGGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVPVGSRQTRLCRSPARCPTRGC*DFLAWW Trigger: CCACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGG...GCAGCGCGCTGGCGAACGGCAGAGCCTTGTCTGCCGGCTCCCCACCGGTACCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGATGAGGAGTTCGGATTCCAGCCGGGTGGTACCGGTGGGGAGCCGGCAGGCTCTGGGCGAGGCTaGCGCTGCCGGGGTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: FPDEEFGFQPGGTGGEPAGSGRG*RCRGRT Trigger: AGTCCTACCCCGGCAGCGCCAGCCTCGCCCAGAGCC...TGCCGGCTCCCCACCGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTACCGGTGGGGAGCCGGCAGACAAGGCTCTGCCGTTCGCCAGCGCGCTGCGGAGAAGGAGACATTTaGTGGTTGGGCGGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VVPVGSRQTRLCRSPARCGEGDI*WLGGPN Trigger: GTTTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCC...GCAGCGCGCTGGCGAACGGCAGAGCCTTGTCTGCCGGCTCCCCACCGGTACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTACCGGTGGGGAGCCGGCAGACAAGGCTCTGCCGTTCGCCAGCGCGCTGCGAAGGAGACATTTGCTaGTTGGGCGGCCCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVPVGSRQTRLCRSPARCEGDIC*LGGPNS Trigger: GGAGTTTGGGCCGCCCAACCAGCAAATGTCTCCTTC...GCAGCGCGCTGGCGAACGGCAGAGCCTTGTCTGCCGGCTCCCCACCGGTACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCGGAGCCCTTCCCAGATGAGGAGTTCGGATTCCAGCCGGGTGGTACCGCCGTCGGGCTGCGAATaGCCCGCCGAGTGTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CCRSPSQMRSSDSSRVVPPSGCE*PAECKQ Trigger: CTGTTTACACTCGGCGGGCCATTCGCAGCCCGACGG...CGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAAGGGCTCCGGCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGATGAGGAGTTCGGATTCCAGCCGGGTGGTACCGGTGGGGAGCCGGCACCTGCAACTGCAAACTaGGTCCTCCAGGCGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPDEEFGFQPGGTGGEPAPATAN*VLQAAL Trigger: CAGAGCCGCCTGGAGGACCCAGTTTGCAGTTGCAGG...TGCCGGCTCCCCACCGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR CCA 90 bp | ATCTTGCACCAGAGCCCGTGCATTCAGGGTGATGACTTGTGTTCTGTGGTCGAGTCCTCCAGGCGGCTCTaGGCGAGGCTGGCGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILHQSPCIQGDDLCSVVESSRRL*ARLALP Trigger: CGGCAGCGCCAGCCTCGCCCAGAGCCGCCTGGAGGA...CTCGACCACAGAACACAAGTCATCACCCTGAATGCACGGGCTCTGGTGCAAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | ATCTTGCACCAGAGCCCGTGCATTCAGGGTGATGACTTGTGTTCTGTGGTCGAGCTCGGAGTCCGCCCCTaGGTCCTCCAGGCGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILHQSPCIQGDDLCSVVELGVRP*VLQAAL Trigger: CAGAGCCGCCTGGAGGACCCAGGGGCGGACTCCGAG...CTCGACCACAGAACACAAGTCATCACCCTGAATGCACGGGCTCTGGTGCAAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | ATCTTGCACCAGAGCCCGTGCATTCAGGGTGATGACTTGTGTTCTGTGGTCGAGCGGATTCCAGCCGGGTaGTACCGGTGGGGAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILHQSPCIQGDDLCSVVERIPAG*YRWGAG Trigger: GCCGGCTCCCCACCGGTACCACCCGGCTGGAATCCG...CTCGACCACAGAACACAAGTCATCACCCTGAATGCACGGGCTCTGGTGCAAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR TCA 90 bp | CTGCCGGCAGACCGGTGTGGCTCAGACCTGGTGACTTTTTGGAGAGGTCGTAGAAGGACTGCACGGAACTaGTGTAGGGGCTGGACGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPADRCGSDLVTFWRGRRRTARN*CRGWTR Trigger: ACGCGTCCAGCCCCTACATCAGTTCCGTGCAGTCCT...TCTACGACCTCTCCAAAAAGTCACCAGGTCTGAGCCACACCGGTCTGCCGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | GGTCCGGTCCAGCGGGTTATCTTGTGGCACTGGCTGTCTCCAGTGGCTGTGCCTGAAGGAGACATTTGCTaGTTGGGCGGCCCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPVQRVILWHWLSPVAVPEGDIC*LGGPNS Trigger: GGAGTTTGGGCCGCCCAACCAGCAAATGTCTCCTTC...AGGCACAGCCACTGGAGACAGCCAGTGCCACAAGATAACCCGCTGGACCGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | CCCTTCCCAGATGAGGAGTTCGGATTCCAGCCGGGTGGTACCGGTGGGGAGCCGAGTGTAAACAGTGCATaGAGTAGTGCCCGTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PFPDEEFGFQPGGTGGEPSVNSA*SSARGT Trigger: TGTCCCACGGGCACTACTCCATGCACTGTTTACACT...CGGCTCCCCACCGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCAGATGAGGAGTTCGGATTCCAGCCGGGTGGTACCGGTGGGGAGCCGGGCTGTTGAGACTTTCTaGCATGGTGGTCATGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PSQMRSSDSSRVVPVGSRAVETF*HGGHGH Trigger: ATGACCATGACCACCATGCCAGAAAGTCTCAACAGC...CCGGCTCCCCACCGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGGCTCATTGGTCCTCTCTCTTGCTGCCCAAAGTATGATTTTTCTTCTTGGGCGAGGCTGGCGCTaGCGGGGTAGGACTGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LQGSLVLSLAAQSMIFLLGRGWR*RGRTAR Trigger: CCGTGCAGTCCTACCCCGGCAGCGCCAGCCTCGCCC...AAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | CTCCAAGGCTCATTGGTCCTCTCTCTTGCTGCCCAAAGTATGATTTTTCTTCTTGGCTCTGGGCGAGGCTaGCGCTGCCGGGGTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: LQGSLVLSLAAQSMIFLLGSGRG*RCRGRT Trigger: AGTCCTACCCCGGCAGCGCCAGCCTCGCCCAGAGCC...AAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | CTGCCGGCAGACCGGTGTGGCTCAGACCTGGTGACTTTTTGGAGAGGTCGTAGATGCTGCATAGCTTCTTaGTGCGCTGAGGGATACCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPADRCGSDLVTFWRGRRCCIAS*CAEGYH Trigger: ATGGTATCCCTCAGCGCACCAAGAAGCTATGCAGCA...TCTACGACCTCTCCAAAAAGTCACCAGGTCTGAGCCACACCGGTCTGCCGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR CAA 72 bp | ATCTTGCACCAGAGCCCGTGCATTCAGGGTGATGACTaGTGTTCTGTGGTCGAGCCGCTGCTTGTGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ILHQSPCIQGDD*CSVVEPLLVSY Trigger: GTAAGACACAAGCAGCGGCTCGACCACAGAACACAAGTCATCACCCTGAATGCACGGGCTCTGGTGCAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR GCA 90 bp | CCAAGGCTCATTGGTCCTCTCTCTTGCTGCCCAAAGTATGATTTTTCTTCTTGGGCTGCCCTCCAGAGCTaGCCCGCCTTGCTTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRLIGPLSCCPKYDFSSWAALQS*PALLHQ Trigger: CTGATGAAGCAAGGCGGGGCAGCTCTGGAGGGCAGC...CCAAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTCAGACCTGGTGACTTTTTGGAGAGGTCGTAGAATGAGGACAGCAGACAGTGCCCGTGGGACATaGGAGAAGGAGACATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGSDLVTFWRGRRMRTADSARGT*EKETFA Trigger: AGCAAATGTCTCCTTCTCCCATGTCCCACGGGCACT...GTCTGCTGTCCTCATTCTACGACCTCTCCAAAAAGTCACCAGGTCTGAGCCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGAATTTGGAATTGGCCAACACTCAGCGTCAGATGAAGTCTGTTTTTCACCGTCGGGCTGCGAATaGCCCGCCGAGTGTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PREFGIGQHSASDEVCFSPSGCE*PAECKQ Trigger: CTGTTTACACTCGGCGGGCCATTCGCAGCCCGACGG...TGAAAAACAGACTTCATCTGACGCTGAGTGTTGGCCAATTCCAAATTCTCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGAATTTGGAATTGGCCAACACTCAGCGTCAGATGAAGTCTGTTTTTCACCGACACGGGGCTGTTaGGACTTTCTGGCATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PREFGIGQHSASDEVCFSPTRGC*DFLAWW Trigger: CCACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGG...TGAAAAACAGACTTCATCTGACGCTGAGTGTTGGCCAATTCCAAATTCTCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR GCA 90 bp | GAGGACCTTGACTTCGGCGCACAGACAGTGCAAAAAGGAGACAAAGACGGACAGTGCATAGCTTCTTGGTaGGCTGAGGGATACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: EDLDFGAQTVQKGDKDGQCIASW*AEGYHD Trigger: ATCATGGTATCCCTCAGCGCACCAAGAAGCTATGCA...CTGTCCGTCTTTGTCTCCTTTTTGCACTGTCTGTGCGCCGAAGTCAAGGTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR TCA 90 bp | GAGCGTATTTCCCCCTCCTACGTATTTGTTTTTCCTGATAGTCTCACAAAGATGGGAGCCCTTCCCAGATaGGGAGTTCGGATTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ERISPSYVFVFPDSLTKMGALPR*GVRIPA Trigger: GGCTGGAATCCGAACTCCTCATCTGGGAAGGGCTCC...CATCTTTGTGAGACTATCAGGAAAAACAAATACGTAGGAGGGGGAAATACGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR CAA 72 bp | ATGTTTGGACAGCGCCCACTCCATGTCCCAGAGAATTaGGAATTGGCCAACACTCAGCGTCAGATGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: MFGQRPLHVPEN*ELANTQRQMKS Trigger: AGACTTCATCTGACGCTGAGTGTTGGCCAATTCCAAATTCTCTGGGACATGGAGTGGGCGCTGTCCAAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR TCA 90 bp | CTTAAAAGTCACTTTCCTGTCCTTGTTCCCTCTTCTGGTGTGTTTAAGGTAAATCGGTCGGGAGAAGGATaGGGCCGAACTGTAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LKSHFPVLVPSSGVFKVNRSGEG*GRTVGT Trigger: GGTGCCTACAGTTCGGCCTCATCCTTCTCCCGACCG...ATTTACCTTAAACACACCAGAAGAGGGAACAAGGACAGGAAAGTGACTTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | ATCTTGCACCAGAGCCCGTGCATTCAGGGTGATGACTTGTGTTCTGTGGTCGAGCCTGCAACTGCAAACTaGAATAAATTGTCCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILHQSPCIQGDDLCSVVEPATAN*NKLSWV Trigger: AACCCAGGACAATTTATTCCAGTTTGCAGTTGCAGG...CTCGACCACAGAACACAAGTCATCACCCTGAATGCACGGGCTCTGGTGCAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGAATTTGGAATTGGCCAACACTCAGCGTCAGATGAAGTCTGTTTTTCAAGAGCTGCCCCGCCTTaGTTCATCAGCTTCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PREFGIGQHSASDEVCFSRAAPP*FISFLN Trigger: GTTCAAGAAGCTGATGAAGCAAGGCGGGGCAGCTCT...TGAAAAACAGACTTCATCTGACGCTGAGTGTTGGCCAATTCCAAATTCTCTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR GCA 90 bp | AAATGCACGGCATCCTGTTTTCCCTTTCTGCATTTCAGCCAAGTACAAAAGTTAGGAGAAGGAGACATTTaGTGGTTGGGCGGCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KCTASCFPFLHFSQVQKLGEGDI*WLGGPN Trigger: GTTTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCC...TAACTTTTGTACTTGGCTGAAATGCAGAAAGGGAAAACAGGATGCCGTGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR GCA 90 bp | CCAAGGCTCATTGGTCCTCTCTCTTGCTGCCCAAAGTATGATTTTTCTTCTTGGAACCATATCTTGACCTaGGTCTGTGTGAGTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRLIGPLSCCPKYDFSSWNHILT*VCVSPK Trigger: CTTGGGACTCACACAGACGCAGGTCAAGATATGGTT...CCAAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR TCA 90 bp | AAATGCACGGCATCCTGTTTTCCCTTTCTGCATTTCAGCCAAGTACAAAAGTTAGGCAGAGCTAAGTACTaGGTTTGTTGGAACCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KCTASCFPFLHFSQVQKLGRAKY*VCWNLR Trigger: CCGGAGGTTCCAACAAACTCAGTACTTAGCTCTGCC...TAACTTTTGTACTTGGCTGAAATGCAGAAAGGGAAAACAGGATGCCGTGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | CTCCAAGGCTCATTGGTCCTCTCTCTTGCTGCCCAAAGTATGATTTTTCTTCTTGCTGTTGAGACTTTCTaGCATGGTGGTCATGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQGSLVLSLAAQSMIFLLAVETF*HGGHGH Trigger: ATGACCATGACCACCATGCCAGAAAGTCTCAACAGC...AAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | CTTAAAAGTCACTTTCCTGTCCTTGTTCCCTCTTCTGGTGTGTTTAAGGTAAATAGTGTAAACAGTGCATaGAGTAGTGCCCGTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LKSHFPVLVPSSGVFKVNSVNSA*SSARGT Trigger: TGTCCCACGGGCACTACTCCATGCACTGTTTACACT...ATTTACCTTAAACACACCAGAAGAGGGAACAAGGACAGGAAAGTGACTTTTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CCA 90 bp | CTCATTTCACAAAGCATCGGGTTTACAGCCACACACAACAGAACGGAAAGAGGCTGGAATAAATTGTCCTaGGTTTACGGATCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LISQSIGFTATHNRTERGWNKLS*VYGSFS Trigger: GGAAAAAGATCCGTAAACCCAGGACAATTTATTCCA...GCCTCTTTCCGTTCTGTTGTGTGTGGCTGTAAACCCGATGCTTTGTGAAATGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| 3UTR CAA 72 bp | AGGTGTTCTTGTCCAAACGTTTTTGACAACATCCTATaGGTTTTACATATCTTACTTCCTTACTTCGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RCSCPNVFDNIL*VLHILLPYFGL Trigger: AAGACCGAAGTAAGGAAGTAAGATATGTAAAACCAATAGGATGTTGTCAAAAACGTTTGGACAAGAACACCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CAA 90 bp | CGGTGGGGAGCCGGCAGACAAGGCTCTGCCGTTCGCCAGCGCGCTGCCCTCCAGCCCGACACGGGGCTGTaGAGACTTTCTGGCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RWGAGRQGSAVRQRAALQPDTGL*RLSGMV Trigger: CACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGGG...CTGGAGGGCAGCGCGCTGGCGAACGGCAGAGCCTTGTCTGCCGGCTCCCCACCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS TCA 90 bp | GCTGACCGAGTTGACGTAGGGGTAGCCCAGCGGTCGGGAGAAGGATaGGGCCGAACTGTAGGCACCGTCGGGCTGCGAATGGCCCGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ADRVDVGVAQRSGEG*GRTVGTVGLRMARR Trigger: TCGGCGGGCCATTCGCAGCCCGACGGTGCCTACAGTTCGGCCTCATCCTTCTCCCGACCGCTGGGCTACCCCTACGTCAACTCGGTCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037119.4 ENSMUST00000145444.2 ENSMUST00000152711.2 |
||
| CDS-3UTR CAA 90 bp | CCGTTCGCCAGCGCGCTGCCCTCCAGAGCTGCCCCGCCTTGCTTCATCAGCTTCTCCATAAACACAGCCTaGCCCGACACGGGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PFASALPSRAAPPCFISFSINTA*PDTGLL Trigger: CAACAGCCCCGTGTCGGGCAAGGCTGTGTTTATGGA...GAAGCTGATGAAGCAAGGCGGGGCAGCTCTGGAGGGCAGCGCGCTGGCGAACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTCCCAGATGAGGAGTTCGGATTCCAGCCGGGTGGTACCGGTGGGGAGCCGGGGAGAAGGAGACATTaGCTGGTTGGGCGGCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PFPDEEFGFQPGGTGGEPGRRRH*LVGRPK Trigger: TTTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCCC...CGGCTCCCCACCGGTACCACCCGGCTGGAATCCGAACTCCTCATCTGGGAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145444.2 |
||
| CDS CCA 90 bp | AGGCACCGTCGGGCTGCGAATGGCCCGCCGAGTGTAAACAGTGCATaGAGTAGTGCCCGTGGGACATGGGAGAAGGAGACATTTGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RHRRAANGPPSVNSA*SSARGTWEKETFAG Trigger: ACCAGCAAATGTCTCCTTCTCCCATGTCCCACGGGCACTACTCCATGCACTGTTTACACTCGGCGGGCCATTCGCAGCCCGACGGTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037119.4 ENSMUST00000145444.2 ENSMUST00000152711.2 |
||
| CDS-3UTR CAA 90 bp | CTCATTTCACAAAGCATCGGGTTTACAGCCACACACAACAGAACGGAAAGAGGCGGGAGAAGGAGACATTaGCTGGTTGGGCGGCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LISQSIGFTATHNRTERGGRRRH*LVGRPK Trigger: TTTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCCC...GCCTCTTTCCGTTCTGTTGTGTGTGGCTGTAAACCCGATGCTTTGTGAAATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGAATTTGGAATTGGCCAACACTCAGCGTCAGATGAAGTCTGTTTTTCACCCGACACGGGGCTGTaGAGACTTTCTGGCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PREFGIGQHSASDEVCFSPDTGL*RLSGMV Trigger: CACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGGG...TGAAAAACAGACTTCATCTGACGCTGAGTGTTGGCCAATTCCAAATTCTCTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CAA 90 bp | GAGCGTATTTCCCCCTCCTACGTATTTGTTTTTCCTGATAGTCTCACAAAGATGTCCATAAACACAGCCTaGCCCGACACGGGGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ERISPSYVFVFPDSLTKMSINTA*PDTGLL Trigger: CAACAGCCCCGTGTCGGGCAAGGCTGTGTTTATGGA...CATCTTTGTGAGACTATCAGGAAAAACAAATACGTAGGAGGGGGAAATACGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CAA 90 bp | GAGCGTATTTCCCCCTCCTACGTATTTGTTTTTCCTGATAGTCTCACAAAGATGGGAGACATTTGCTGGTaGGGCGGCCCAAACTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: ERISPSYVFVFPDSLTKMGDICW*GGPNSI Trigger: TATGGAGTTTGGGCCGCCCAACCAGCAAATGTCTCC...CATCTTTGTGAGACTATCAGGAAAAACAAATACGTAGGAGGGGGAAATACGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGGCTCATTGGTCCTCTCTCTTGCTGCCCAAAGTATGATTTTTCTTCTTCGGATCTTTTTCCCTTaGCCGTTAAAGCGCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LQGSLVLSLAAQSMIFLLRIFFP*PLKRTS Trigger: CGAGGTGCGCTTTAACGGCAAAGGGAAAAAGATCCG...AAGAAGAAAAATCATACTTTGGGCAGCAAGAGAGAGGACCAATGAGCCTTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS-3UTR CAA 90 bp | GAGCGTATTTCCCCCTCCTACGTATTTGTTTTTCCTGATAGTCTCACAAAGATGCAGAGCTGCCCCGCCTaGCTTCATCAGCTTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ERISPSYVFVFPDSLTKMQSCPA*LHQLLE Trigger: TTCAAGAAGCTGATGAAGCAAGGCGGGGCAGCTCTG...CATCTTTGTGAGACTATCAGGAAAAACAAATACGTAGGAGGGGGAAATACGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037119.4 |
||
| CDS TCA 72 bp | GTTGACGTAGGGGTAGCCCAGCGGTCGGGAGAAGGATaGGGCCGAACTGTAGGCACCGTCGGGCTGCGAATG | + |
|
Preference number: 6 (lower is better) Translates to: VDVGVAQRSGEG*GRTVGTVGLRM Trigger: CATTCGCAGCCCGACGGTGCCTACAGTTCGGCCTCATCCTTCTCCCGACCGCTGGGCTACCCCTACGTCAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037119.4 ENSMUST00000145444.2 ENSMUST00000152711.2 |
||
| CDS CAA 72 bp | TGCTGGTTGGGCGGCCCAAACTCCATAAACACAGCCTaGCCCGACACGGGGCTGTTGAGACTTTCTGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: CWLGGPNSINTA*PDTGLLRLSGM Trigger: CATGCCAGAAAGTCTCAACAGCCCCGTGTCGGGCAAGGCTGTGTTTATGGAGTTTGGGCCGCCCAACCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037119.4 ENSMUST00000145444.2 ENSMUST00000152711.2 |
||
| CDS CAA 72 bp | TGCCCGTGGGACATGGGAGAAGGAGACATTTGCTGGTaGGGCGGCCCAAACTCCATAAACACAGCCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CPWDMGEGDICW*GGPNSINTALP Trigger: GGGCAAGGCTGTGTTTATGGAGTTTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCCCATGTCCCACGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037119.4 ENSMUST00000145444.2 ENSMUST00000152711.2 |
||
| CDS CAA 90 bp | GGAGACATTTGCTGGTTGGGCGGCCCAAACTCCATAAACACAGCCTaGCCCGACACGGGGCTGTTGAGACTTTCTGGCATGGTGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GDICWLGGPNSINTA*PDTGLLRLSGMVVM Trigger: CATGACCACCATGCCAGAAAGTCTCAACAGCCCCGTGTCGGGCAAGGCTGTGTTTATGGAGTTTGGGCCGCCCAACCAGCAAATGTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000037119.4 ENSMUST00000145444.2 ENSMUST00000152711.2 |
||
| CDS CCA 72 bp | AGTGTAAACAGTGCATGGAGTAGTGCCCGTGGGACATaGGAGAAGGAGACATTTGCTGGTTGGGCGGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SVNSAWSSARGT*EKETFAGWAAQ Trigger: TTGGGCCGCCCAACCAGCAAATGTCTCCTTCTCCCATGTCCCACGGGCACTACTCCATGCACTGTTTACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037119.4 ENSMUST00000145444.2 ENSMUST00000152711.2 |
||