Pregenerated sensors for DLST (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004789Ensembl transcript IDs: ENSMUST00000053811.10, ENSMUST00000221357.2, ENSMUST00000223332.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGCTGGTTCCCACCGCAGTCCACCCTCCCCTGTCTCTGTGCCCTaGACCAGAGGCAACAAGACCTTGCTCCCCACAGGCCACATCCCA | + |
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Preference number: 1 (lower is better) Translates to: EAGSHRSPPSPVSVP*TRGNKTLLPTGHIP Trigger: TGGGATGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCACAGAGACAGGGGAGGGTGGACTGCGGTGGGAACCAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR GCA 90 bp | CTCCTGAGGCTGGTTCCCACCGCAGTCCACCCTCCCCTGTCTCTGTaGCCTGCACCAGAGGCAACAAGACCTTGCTCCCCACAGGCCACA | + |
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Preference number: 1 (lower is better) Translates to: LLRLVPTAVHPPLSL*PAPEATRPCSPQAT Trigger: TGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCACAGAGACAGGGGAGGGTGGACTGCGGTGGGAACCAGCCTCAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR GCA 90 bp | CACCCTCCCCTGTCTCTGTGCCCTGCACCAGAGGCAACAAGACCTTaGTCCCCACAGGCCACATCCCAGGGAGGGAGAGCACAGCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: HPPLSLCPAPEATRP*SPQATSQGGRAQPL Trigger: AAGAGGCTGTGCTCTCCCTCCCTGGGATGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCACAGAGACAGGGGAGGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR TCA 90 bp | GTGATCTTAGAGATGACACCATCATCTCGTCGCTGTCCTAACTCCTaGGGCTGGTTCCCACCGCAGTCCACCCTCCCCTGTCTCTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: VILEMTPSSRRCPNS*GWFPPQSTLPCLCA Trigger: GGCACAGAGACAGGGGAGGGTGGACTGCGGTGGGAACCAGCCTCAGGAGTTAGGACAGCGACGAGATGATGGTGTCATCTCTAAGATCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR CCA 90 bp | GTACGTAATTATGCCAAAATGAATCTTCCCAGTGCCAGCATACAATaGAGCCAGAGAGGGCAAGCCAGGGTTCAACTCCCACCTGTGACT | + |
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Preference number: 1 (lower is better) Translates to: VRNYAKMNLPSASIQ*SQRGQARVQLPPVT Trigger: AGTCACAGGTGGGAGTTGAACCCTGGCTTGCCCTCTCTGGCTCCATTGTATGCTGGCACTGGGAAGATTCATTTTGGCATAATTACGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR GCA 90 bp | GATACGAGGCCTAGGAGCGCTCAAAACCACTTAAGCATTTTACCATaGTTCAAGAATATTCCAACAACTGTACCTGCACCTGAGGGTGAT | + |
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Preference number: 1 (lower is better) Translates to: DTRPRSAQNHLSILP*FKNIPTTVPAPEGD Trigger: ATCACCCTCAGGTGCAGGTACAGTTGTTGGAATATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR-3UTR TCA 90 bp | GTGCCCTGCACCAGAGGCAACAAGACCTTGCTCCCCACAGGCCACATCCCAGGGGCTGCCCCACTGCCATaGTGTGCTAAAATCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: VPCTRGNKTLLPTGHIPGAAPLP*CAKICF Trigger: AAAGCAGATTTTAGCACATCATGGCAGTGGGGCAGC...CCCTGGGATGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR-3UTR TCA 90 bp | GTGCCCTGCACCAGAGGCAACAAGACCTTGCTCCCCACAGGCCACATCCCAGGGTTCAGCCTGATCTTGTaGGAACAGTCCCTTCGTCAG | + |
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Preference number: 2 (lower is better) Translates to: VPCTRGNKTLLPTGHIPGFSLIL*EQSLRQ Trigger: CTGACGAAGGGACTGTTCTCACAAGATCAGGCTGAA...CCCTGGGATGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAAGGACCCTGCTTCTTCCTGGGACAGGGCACCAGAGGGAGGGCCTCCCTACTCTATCTCAGAAATaGTGCAAGCCCTTCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: FLRTLLLPGTGHQREGLPTLSQK*CKPFKG Trigger: CCCTTTGAAGGGCTTGCATCATTTCTGAGATAGAGT...AGGGAGGCCCTCCCTCTGGTGCCCTGTCCCAGGAAGAAGCAGGGTCCTTAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAAGGACCCTGCTTCTTCCTGGGACAGGGCACCAGAGGGAGGGCCTCCCTAAAGTAAGGCTCTGTTaGAGCCTCTACTCCATCATG | + |
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Preference number: 2 (lower is better) Translates to: FLRTLLLPGTGHQREGLPKVRLC*SLYSIM Trigger: CATGATGGAGTAGAGGCTTCAACAGAGCCTTACTTT...AGGGAGGCCCTCCCTCTGGTGCCCTGTCCCAGGAAGAAGCAGGGTCCTTAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAACAGAGGAGTTCCTCCTTCAACTTTGCCCCCATCGGGTACCAAAAGAGCTGCTGGCGACGGAACCTaGACAGAAGTCTTGTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: VNRGVPPSTLPPSGTKRAAGDGT*TEVLSV Trigger: GACAGACAAGACTTCTGTGCAGGTTCCGTCGCCAGC...AGCTCTTTTGGTACCCGATGGGGGCAAAGTTGAAGGAGGAACTCCTCTGTTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTTGTATGTTACTCATGTCAACCTCATTGAAAGTCGTCAGCATTGCACACAGGGGCCGCCGGTGCTaGGGGCTCTGCTTTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ISCMLLMSTSLKVVSIAHRGRRC*GLCFVG Trigger: GCCCACAAAGCAGAGCCCGCAGCACCGGCGGCCCCT...GTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAACATACAAGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| 3UTR CAA 90 bp | AGACAGGATCAGCAGATGAGAGGTGTGTGGGAAAGTAAGGCTCTGTaGAAGCCTCTACTCCATCATGCCTATCCATTGGGGTCATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RQDQQMRGVWESKAL*KPLLHHAYPLGSSW Trigger: CCAGGATGACCCCAATGGATAGGCATGATGGAGTAGAGGCTTCAACAGAGCCTTACTTTCCCACACACCTCTCATCTGCTGATCCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTTGTATGTTACTCATGTCAACCTCATTGAAAGTCGTCAGCATTGCACACCTGGTGGCATCTGAGTaGGCACAGGTGCTGCGGGGG | + |
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Preference number: 2 (lower is better) Translates to: ISCMLLMSTSLKVVSIAHLVASE*AQVLRG Trigger: CCCCCGCAGCACCTGTGCTCACTCAGATGCCACCAG...GTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAACATACAAGAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| 3UTR-3UTR GCA 90 bp | ACGAGGCCTAGGAGCGCTCAAAACCACTTAAGCATTTTACCATGCTTCAAGAATGAGGCAACAAGACCTTaGTCCCCACAGGCCACATCC | + |
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Preference number: 2 (lower is better) Translates to: TRPRSAQNHLSILPCFKNEATRP*SPQATS Trigger: GGATGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTC...ATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR-3UTR CCA 90 bp | ACGAGGCCTAGGAGCGCTCAAAACCACTTAAGCATTTTACCATGCTTCAAGAATAGTGCCAGCATACAATaGAGCCAGAGAGGGCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: TRPRSAQNHLSILPCFKNSASIQ*SQRGQA Trigger: GGCTTGCCCTCTCTGGCTCCATTGTATGCTGGCACT...ATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR-3UTR CCA 90 bp | TTACTCATGTCAACCTCATTGAAAGTCGTCAGCATTGCACACGTGTTCTGGGCTGTGGAGGGGCAGCAGTaGGTTTTATTGCAGACACTG | + |
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Preference number: 2 (lower is better) Translates to: LLMSTSLKVVSIAHVFWAVEGQQ*VLLQTL Trigger: CAGTGTCTGCAATAAAACCCACTGCTGCCCCTCCAC...AGCCCAGAACACGTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTTGTATGTTACTCATGTCAACCTCATTGAAAGTCGTCAGCATTGCACACTCCTGCCTCAGCCAGTaGAGGGGCAGCAGTGGGTTT | + |
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Preference number: 2 (lower is better) Translates to: ISCMLLMSTSLKVVSIAHSCLSQ*RGSSGF Trigger: AAACCCACTGCTGCCCCTCCACTGGCTGAGGCAGGA...GTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAACATACAAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTCACACCACCTGGAATTTAAAAGCTCTCTTCAGCCTGATCTTGTGAGAACACATCAAGTCAGAGTGTaGACAGCTGGGATGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: CSHHLEFKSSLQPDLVRTHQVRV*TAGMEA Trigger: TGCCTCCATCCCAGCTGTGCACACTCTGACTTGATG...TGTTCTCACAAGATCAGGCTGAAGAGAGCTTTTAAATTCCAGGTGGTGTGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGCAGGATACGAGGCCTAGGAGCGCTCAAAACCACTTAAGCATTTTACCACCTCTTCCCAGAACATaGTCACACCACCTGGAATTT | + |
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Preference number: 2 (lower is better) Translates to: SVQDTRPRSAQNHLSILPPLPRT*SHHLEF Trigger: AAATTCCAGGTGGTGTGAGCATGTTCTGGGAAGAGG...TGGTAAAATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGTATCCTGCACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR CAA 90 bp | TCAGAAATGATGCAAGCCCTTCAAAGGGAAACTGCCCCTGGTGTTTaGAAGGGGATTCACATAGGTGGGAGCCTCAATTTCTCAAGAATT | + |
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Preference number: 2 (lower is better) Translates to: SEMMQALQRETAPGV*KGIHIGGSLNFSRI Trigger: AATTCTTGAGAAATTGAGGCTCCCACCTATGTGAATCCCCTTCAAAACACCAGGGGCAGTTTCCCTTTGAAGGGCTTGCATCATTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATGATGCACATGTGGCAACCAAGTCCAAATGGTATTAGGAGTGTTCGTGCCCAATTTCTCAAGAATTaGCTTCTCAGGGGCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: IMMHMWQPSPNGIRSVRAQFLKN*LLRGMG Trigger: CCCCATGCCCCTGAGAAGCCAATTCTTGAGAAATTG...GGCACGAACACTCCTAATACCATTTGGACTTGGTTGCCACATGTGCATCATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR-3UTR GCA 90 bp | TTACTCATGTCAACCTCATTGAAAGTCGTCAGCATTGCACACGTGTTCTGGGCTAGCAGTGGGTTTTATTaGAGACACTGGTTTGCTAGA | + |
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Preference number: 2 (lower is better) Translates to: LLMSTSLKVVSIAHVFWASSGFY*RHWFAR Trigger: TCTAGCAAACCAGTGTCTGCAATAAAACCCACTGCT...AGCCCAGAACACGTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTCATGTCAACCTCATTGAAAGTCGTCAGCATTGCACACGTGTTCTGGGCTTTTTATTGCAGACACTaGTTTGCTAGAAGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LLMSTSLKVVSIAHVFWAFYCRH*FARRRL Trigger: CAGCCTCCTTCTAGCAAACCAGTGTCTGCAATAAAA...AGCCCAGAACACGTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| 3UTR-3UTR TCA 90 bp | CGTAATTATGCCAAAATGAATCTTCCCAGTGCCAGCATACAATGGAGCCAGAGATTTTCAGTTCCTGCATaGTCGATAGGTAGGATGTGT | + |
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Preference number: 2 (lower is better) Translates to: RNYAKMNLPSASIQWSQRFSVPA*SIGRMC Trigger: ACACATCCTACCTATCGATCATGCAGGAACTGAAAA...TCTCTGGCTCCATTGTATGCTGGCACTGGGAAGATTCATTTTGGCATAATTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR-3UTR TCA 90 bp | ATAATGATGCACATGTGGCAACCAAGTCCAAATGGTATTAGGAGTGTTCGTGCCTTTTCAGTTCCTGCATaGTCGATAGGTAGGATGTGT | + |
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Preference number: 2 (lower is better) Translates to: IMMHMWQPSPNGIRSVRAFSVPA*SIGRMC Trigger: ACACATCCTACCTATCGATCATGCAGGAACTGAAAA...GGCACGAACACTCCTAATACCATTTGGACTTGGTTGCCACATGTGCATCATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR-3UTR GCA 90 bp | AAACCACTTAAGCATTTTACCATGCTTCAAGAATATTCCAACAACTGTACCTGCGATGCTGCACAATCCTaGCTGTCCCCAAATACCCCA | + |
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Preference number: 2 (lower is better) Translates to: KPLKHFTMLQEYSNNCTCDAAQS*LSPNTP Trigger: TGGGGTATTTGGGGACAGGCAGGATTGTGCAGCATC...GCAGGTACAGTTGTTGGAATATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR-3UTR CCA 90 bp | CGTAATTATGCCAAAATGAATCTTCCCAGTGCCAGCATACAATGGAGCCAGAGAAAATCACATGGTCCCTaGTGGTATCCCTATAGCATA | + |
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Preference number: 2 (lower is better) Translates to: RNYAKMNLPSASIQWSQRKSHGP*WYPYSI Trigger: TATGCTATAGGGATACCACCAGGGACCATGTGATTT...TCTCTGGCTCCATTGTATGCTGGCACTGGGAAGATTCATTTTGGCATAATTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR-3UTR GCA 90 bp | ATAACCAGACATGTGCTTATAATGATGCACATGTGGCAACCAAGTCCAAATGGTCTGTTAAAAGCAATATaGCTAAAATATGGGATGGGG | + |
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Preference number: 2 (lower is better) Translates to: ITRHVLIMMHMWQPSPNGLLKAI*LKYGMG Trigger: CCCCATCCCATATTTTAGGCATATTGCTTTTAACAG...ACCATTTGGACTTGGTTGCCACATGTGCATCATTATAAGCACATGTCTGGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR GCA 72 bp | CTGGTTCCCACCGCAGTCCACCCTCCCCTGTCTCTGTaGCCTGCACCAGAGGCAACAAGACCTTGCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: LVPTAVHPPLSL*PAPEATRPCSP Trigger: TGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCACAGAGACAGGGGAGGGTGGACTGCGGTGGGAACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR GCA 72 bp | CTGTCTCTGTGCCCTGCACCAGAGGCAACAAGACCTTaGTCCCCACAGGCCACATCCCAGGGAGGGAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: LSLCPAPEATRP*SPQATSQGGRA Trigger: TGCTCTCCCTCCCTGGGATGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCACAGAGACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR TCA 72 bp | GAGATGACACCATCATCTCGTCGCTGTCCTAACTCCTaGGGCTGGTTCCCACCGCAGTCCACCCTCCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: EMTPSSRRCPNS*GWFPPQSTLPC Trigger: ACAGGGGAGGGTGGACTGCGGTGGGAACCAGCCTCAGGAGTTAGGACAGCGACGAGATGATGGTGTCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR TCA 72 bp | CCATCATGCCTATCCATTGGGGTCATCCTGGGTTGGTaGCCAACCCTATCCTGTCCATTGCCCCTCGCACAC | + |
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Preference number: 3 (lower is better) Translates to: PSCLSIGVILGW*PTLSCPLPLAH Trigger: GTGTGCGAGGGGCAATGGACAGGATAGGGTTGGTCACCAACCCAGGATGACCCCAATGGATAGGCATGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR CCA 72 bp | TCCACACAGGTGGCATCAAGTCAGAGTGTGCACAGCTaGGATGGAGGCAAAGCATCCCCTAGGCATCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: STQVASSQSVHS*DGGKASPRHLW Trigger: CCAGAGATGCCTAGGGGATGCTTTGCCTCCATCCCAGCTGTGCACACTCTGACTTGATGCCACCTGTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR GCA 72 bp | CTTGTGAACGCTGGTTACATCGTGCCCTGGCTTCCGTaGTTGAGGCCAATAGTATGTGCCTGCCTGTCATCA | + |
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Preference number: 3 (lower is better) Translates to: LVNAGYIVPWLP*LRPIVCACLSS Trigger: TGATGACAGGCAGGCACATACTATTGGCCTCAAGCACGGAAGCCAGGGCACGATGTAACCAGCGTTCACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR GCA 72 bp | TGCACAATCCTGCCTGTCCCCAAATACCCCAGCCTGTaGTTTCTGGAAGAGGTAGAGCACCTTGAAGCCACT | + |
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Preference number: 3 (lower is better) Translates to: CTILPVPKYPSL*FLEEVEHLEAT Trigger: AGTGGCTTCAAGGTGCTCTACCTCTTCCAGAAAGCACAGGCTGGGGTATTTGGGGACAGGCAGGATTGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR TCA 72 bp | AGAAAGAGCCTCGAGGGAACACTAAGAACAGACTTGTaGACGCTGGTTACATCGTGCCCTGGCTTCCGTGCT | + |
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Preference number: 3 (lower is better) Translates to: RKSLEGTLRTDL*TLVTSCPGFRA Trigger: AGCACGGAAGCCAGGGCACGATGTAACCAGCGTTCACAAGTCTGTTCTTAGTGTTCCCTCGAGGCTCTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR TCA 72 bp | ACCTGGAATTTAAAAGCTCTCTTCAGCCTGATCTTGTaGGAACAGTCCCTTCGTCAGGCTGCCCCACTGCCA | + |
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Preference number: 3 (lower is better) Translates to: TWNLKALFSLIL*EQSLRQAAPLP Trigger: TGGCAGTGGGGCAGCCTGACGAAGGGACTGTTCTCACAAGATCAGGCTGAAGAGAGCTTTTAAATTCCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR-3UTR CAA 90 bp | AGGAGTGTTCGTGCCTCCCCACTCTATCTCAGAAATGATGCAAGCCCTTCAAAGATATGGGATGGGGGCTaGGTATGCTGCTCAGAGATA | + |
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Preference number: 3 (lower is better) Translates to: RSVRASPLYLRNDASPSKIWDGG*VCCSEI Trigger: TATCTCTGAGCAGCATACCAAGCCCCCATCCCATAT...CTTTGAAGGGCTTGCATCATTTCTGAGATAGAGTGGGGAGGCACGAACACTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR-3UTR CAA 90 bp | TTCACTGAATTCCCCTACCAGCAGCAATTCTTAAGGACCCTGCTTCTTCCTGGGACTGCCCCTGGTGTTTaGAAGGGGATTCACATAGGT | + |
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Preference number: 3 (lower is better) Translates to: FTEFPYQQQFLRTLLLPGTAPGV*KGIHIG Trigger: ACCTATGTGAATCCCCTTCAAAACACCAGGGGCAGT...CCCAGGAAGAAGCAGGGTCCTTAAGAATTGCTGCTGGTAGGGGAATTCAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGGCTTGGTATGCTGCTCAGAGATAAGAATATACAAAGATCCTGCGTCCACCATAACGACATTGTGGTaGCCAACAATGATGGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: GGLVCCSEIRIYKDPASTITTLW*PTMMEA Trigger: AGCCTCCATCATTGTTGGCAACCACAATGTCGTTAT...GGTGGACGCAGGATCTTTGTATATTCTTATCTCTGAGCAGCATACCAAGCCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR GCA 72 bp | TATCTCAGAAATGATGCAAGCCCTTCAAAGGGAAACTaGCCCTGGTGTTTTGAAGGGGATTCACATAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: YLRNDASPSKGN*PWCFEGDSHRW Trigger: CCACCTATGTGAATCCCCTTCAAAACACCAGGGGCAGTTTCCCTTTGAAGGGCTTGCATCATTTCTGAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR CCA 72 bp | ACCCAGGGCACTAAGACATTAGTGGGCTCTCCTGGCTaGCTGTTAAAAGCAATATGCCTAAAATATGGGATG | + |
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Preference number: 3 (lower is better) Translates to: TQGTKTLVGSPG*LLKAICLKYGM Trigger: CATCCCATATTTTAGGCATATTGCTTTTAACAGCCAGCCAGGAGAGCCCACTAATGTCTTAGTGCCCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTTGTATGTTACTCATGTCAACCTCATTGAAAGTCGTCAGCATTGCACACATTGCAGACACTGGTTaGCTAGAAGGAGGCTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: ISCMLLMSTSLKVVSIAHIADTG*LEGGCE Trigger: CTCACAGCCTCCTTCTAGCAAACCAGTGTCTGCAAT...GTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAACATACAAGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| 3UTR TCA 72 bp | CTCTCATCTCTTGTATGTTACTCATGTCAACCTCATTaGAAGTCGTCAGCATTGCACACGTGTTCTGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: LSSLVCYSCQPH*KSSALHTCSGL Trigger: AAGCCCAGAACACGTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAACATACAAGAGATGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTTGTATGTTACTCATGTCAACCTCATTGAAAGTCGTCAGCATTGCACACACCTGCACAGAAGTCTaGTCTGTCTCAATCTCACAC | + |
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Preference number: 3 (lower is better) Translates to: ISCMLLMSTSLKVVSIAHTCTEV*SVSISH Trigger: GTGTGAGATTGAGACAGACAAGACTTCTGTGCAGGT...GTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAACATACAAGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| 3UTR GCA 72 bp | CCTAGGAGCGCTCAAAACCACTTAAGCATTTTACCATaGTTCAAGAATATTCCAACAACTGTACCTGCACCT | + |
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Preference number: 3 (lower is better) Translates to: PRSAQNHLSILP*FKNIPTTVPAP Trigger: AGGTGCAGGTACAGTTGTTGGAATATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTTTGAGCGCTCCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| 3UTR GCA 72 bp | AATATGCCTAAAATATGGGATGGGGGCTTGGTATGCTaGTCAGAGATAAGAATATACAAAGATCCTGCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: NMPKIWDGGLVC*SEIRIYKDPAS Trigger: GGACGCAGGATCTTTGTATATTCTTATCTCTGAGCAGCATACCAAGCCCCCATCCCATATTTTAGGCATATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| 3UTR CAA 72 bp | GGGGGAGGAGGGGCCGCCGGTGCTGCGGGCTCTGCTTaGTGGGCTGGAGCAGGAGTTTCAGCTGGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGGGAAGAAGSA*WAGAGVSAGLA Trigger: GGCCAAACCAGCTGAAACTCCTGCTCCAGCCCACAAAGCAGAGCCCGCAGCACCGGCGGCCCCTCCTCCCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
||
| CDS-3UTR GCA 90 bp | CTCCACACAGGTGGCATCAAGTCAGAGTGTGCACAGCTGGGATGGAGGCAAAGCAGGGGCCGCCGGTGCTaGGGGCTCTGCTTTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTGGIKSECAQLGWRQSRGRRC*GLCFVG Trigger: GCCCACAAAGCAGAGCCCGCAGCACCGGCGGCCCCT...GCTTTGCCTCCATCCCAGCTGTGCACACTCTGACTTGATGCCACCTGTGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR GCA 90 bp | GTGCCCTGCACCAGAGGCAACAAGACCTTGCTCCCCACAGGCCACATCCCAGGGGTCGAACTTCCACCTTaGCTCCCACAGCCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPCTRGNKTLLPTGHIPGVELPP*LPQPQA Trigger: GGCCTGTGGCTGTGGGAGGCAAGGTGGAAGTTCGAC...CCCTGGGATGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR CCA 90 bp | GTGCCCTGCACCAGAGGCAACAAGACCTTGCTCCCCACAGGCCACATCCCAGGGTCCTGCCTCAGCCAGTaGAGGGGCAGCAGTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VPCTRGNKTLLPTGHIPGSCLSQ*RGSSGF Trigger: AAACCCACTGCTGCCCCTCCACTGGCTGAGGCAGGA...CCCTGGGATGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGTGTGCACAGCTGGGATGGAGGCAAAGCATCCCCTAGGCATCTCTGGAGACTGGTGGCATCTGAGTaGGCACAGGTGCTGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVHSWDGGKASPRHLWRLVASE*AQVLRG Trigger: CCCCCGCAGCACCTGTGCTCACTCAGATGCCACCAG...TCTCCAGAGATGCCTAGGGGATGCTTTGCCTCCATCCCAGCTGTGCACACTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR CCA 90 bp | GTGCCCTGCACCAGAGGCAACAAGACCTTGCTCCCCACAGGCCACATCCCAGGGCTCTGCTTTGTGGGCTaGAGCAGGAGTTTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPCTRGNKTLLPTGHIPGLCFVG*SRSFSW Trigger: CCAGCTGAAACTCCTGCTCCAGCCCACAAAGCAGAG...CCCTGGGATGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGTAAAGCCTCGAGGGTCAAAAGGAGCACAGATCCCGGAGCCCTGGGATGGGCAGTTCCCCTTCTaGAAGGCAGAAAGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EAVKPRGSKGAQIPEPWDGQFPF*KAESER Trigger: CCGCTCGCTTTCTGCCTTCCAGAAGGGGAACTGCCC...ATCCCAGGGCTCCGGGATCTGTGCTCCTTTTGACCCTCGAGGCTTTACAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR GCA 90 bp | CTCGAGGGTCAAAAGGAGCACAGATCCCGGAGCCCTGGGATTGATGAGGGTACAGTCGAACTTCCACCTTaGCTCCCACAGCCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LEGQKEHRSRSPGIDEGTVELPP*LPQPQA Trigger: GGCCTGTGGCTGTGGGAGGCAAGGTGGAAGTTCGAC...TGTACCCTCATCAATCCCAGGGCTCCGGGATCTGTGCTCCTTTTGACCCTCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR TCA 90 bp | GGGAACACTAAGAACAGACTTGTGAACGCTGGTTACATCGTGCCCTGGCTTCCGGGCACTGGTGGCATCTaGGTGAGCACAGGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GNTKNRLVNAGYIVPWLPGTGGI*VSTGAA Trigger: CGCAGCACCTGTGCTCACTCAGATGCCACCAGTGCC...CGGAAGCCAGGGCACGATGTAACCAGCGTTCACAAGTCTGTTCTTAGTGTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR CCA 90 bp | AGCTCTCTTCAGCCTGATCTTGTGAGAACAGTCCCTTCGTCAGGCTGCCCCACTGGGCAGTTCCCCTTCTaGAAGGCAGAAAGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQPDLVRTVPSSGCPTGQFPF*KAESER Trigger: CCGCTCGCTTTCTGCCTTCCAGAAGGGGAACTGCCC...AGTGGGGCAGCCTGACGAAGGGACTGTTCTCACAAGATCAGGCTGAAGAGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR CCA 90 bp | CTCCACACAGGTGGCATCAAGTCAGAGTGTGCACAGCTGGGATGGAGGCAAAGCGCGGGCTCTGCTTTGTaGGCTGGAGCAGGAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHTGGIKSECAQLGWRQSAGSAL*AGAGVS Trigger: TGAAACTCCTGCTCCAGCCCACAAAGCAGAGCCCGC...GCTTTGCCTCCATCCCAGCTGTGCACACTCTGACTTGATGCCACCTGTGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR TCA 90 bp | GGGGGCTTGGTATGCTGCTCAGAGATAAGAATATACAAAGATCCTGCGTCCACCCTGGTGGCATCTGAGTaGGCACAGGTGCTGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLVCCSEIRIYKDPASTLVASE*AQVLRG Trigger: CCCCCGCAGCACCTGTGCTCACTCAGATGCCACCAG...GGTGGACGCAGGATCTTTGTATATTCTTATCTCTGAGCAGCATACCAAGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCGGGCTCTGCTTTGTGGGCTGGAGCAGGAGTTTCAGCTGGTTTGGCCTTATCTTGCACACAGCCGTaGTTTGGAAGAAGCGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: AAGSALWAGAGVSAGLALSCTQP*FGRSEP Trigger: GGGTTCGCTTCTTCCAAACCACGGCTGTGTGCAAGA...TAAGGCCAAACCAGCTGAAACTCCTGCTCCAGCCCACAAAGCAGAGCCCGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
||
| 3UTR CAA 72 bp | GTGAACGCTGGTTACATCGTGCCCTGGCTTCCGTGCTaGAGGCCAATAGTATGTGCCTGCCTGTCATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VNAGYIVPWLPC*RPIVCACLSSG Trigger: GCCTGATGACAGGCAGGCACATACTATTGGCCTCAAGCACGGAAGCCAGGGCACGATGTAACCAGCGTTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| 3UTR CAA 72 bp | TACTCCATCATGCCTATCCATTGGGGTCATCCTGGGTaGGTGACCAACCCTATCCTGTCCATTGCCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YSIMPIHWGHPG*VTNPILSIAPR Trigger: GCGAGGGGCAATGGACAGGATAGGGTTGGTCACCAACCCAGGATGACCCCAATGGATAGGCATGATGGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGTGTGCACAGCTGGGATGGAGGCAAAGCATCCCCTAGGCATCTCTGGAGATTTCTCCCGATGTTCTaGACGCAGACCTTTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSVHSWDGGKASPRHLWRFLPMF*TQTFSS Trigger: GCTGCTAAAGGTCTGCGTTCAGAACATCGGGAGAAA...TCTCCAGAGATGCCTAGGGGATGCTTTGCCTCCATCCCAGCTGTGCACACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGTTCGTGCCTCCCCACTCTATCTCAGAAATGATGCAAGCCCTTCAAAGACCTTTAGCAGCTCCTaGCTCAGCCAGTGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSVRASPLYLRNDASPSKTFSSS*LSQWRG Trigger: GCCCCTCCACTGGCTGAGGCAGGAGCTGCTAAAGGT...CTTTGAAGGGCTTGCATCATTTCTGAGATAGAGTGGGGAGGCACGAACACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR CCA 90 bp | GATAACGACATTGTGGTTGCCAACAATGATGGAGGCTGTAAAGCCTCGAGGGTCTCCTGCCTCAGCCAGTaGAGGGGCAGCAGTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DNDIVVANNDGGCKASRVSCLSQ*RGSSGF Trigger: AAACCCACTGCTGCCCCTCCACTGGCTGAGGCAGGA...GACCCTCGAGGCTTTACAGCCTCCATCATTGTTGGCAACCACAATGTCGTTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTAAGGACCCTGCTTCTTCCTGGGACAGGGCACCAGAGGGAGGGCCTCCCTCACCACTTCCTTGGTTaGATCATCAATCACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: FLRTLLLPGTGHQREGLPHHFLG*IINHCI Trigger: AATGCAGTGATTGATGATGCAACCAAGGAAGTGGTG...AGGGAGGCCCTCCCTCTGGTGCCCTGTCCCAGGAAGAAGCAGGGTCCTTAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR CCA 90 bp | GGGGGCTTGGTATGCTGCTCAGAGATAAGAATATACAAAGATCCTGCGTCCACCGCGGGCTCTGCTTTGTaGGCTGGAGCAGGAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLVCCSEIRIYKDPASTAGSAL*AGAGVS Trigger: TGAAACTCCTGCTCCAGCCCACAAAGCAGAGCCCGC...GGTGGACGCAGGATCTTTGTATATTCTTATCTCTGAGCAGCATACCAAGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| 3UTR CAA 72 bp | GCTCTGTTGAAGCCTCTACTCCATCATGCCTATCCATaGGGGTCATCCTGGGTTGGTGACCAACCCTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLKPLLHHAYP*GSSWVGDQPYP Trigger: AGGATAGGGTTGGTCACCAACCCAGGATGACCCCAATGGATAGGCATGATGGAGTAGAGGCTTCAACAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR TCA 90 bp | CTCCACACAGGTGGCATCAAGTCAGAGTGTGCACAGCTGGGATGGAGGCAAAGCTCATGTCAACCTCATTaGAAGTCGTCAGCATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHTGGIKSECAQLGWRQSSCQPH*KSSALH Trigger: GTGCAATGCTGACGACTTTCAATGAGGTTGACATGA...GCTTTGCCTCCATCCCAGCTGTGCACACTCTGACTTGATGCCACCTGTGTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR TCA 90 bp | ATATGGGATGGGGGCTTGGTATGCTGCTCAGAGATAAGAATATACAAAGATCCTGGCACTGGTGGCATCTaGGTGAGCACAGGTGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: IWDGGLVCCSEIRIYKDPGTGGI*VSTGAA Trigger: CGCAGCACCTGTGCTCACTCAGATGCCACCAGTGCC...AGGATCTTTGTATATTCTTATCTCTGAGCAGCATACCAAGCCCCCATCCCATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR GCA 90 bp | AACGACATTGTGGTTGCCAACAATGATGGAGGCTGTAAAGCCTCGAGGGTCAAAGCTGGCGACGGAACCTaGACAGAAGTCTTGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NDIVVANNDGGCKASRVKAGDGT*TEVLSV Trigger: GACAGACAAGACTTCTGTGCAGGTTCCGTCGCCAGC...TTTGACCCTCGAGGCTTTACAGCCTCCATCATTGTTGGCAACCACAATGTCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR GCA 90 bp | CTCCACACAGGTGGCATCAAGTCAGAGTGTGCACAGCTGGGATGGAGGCAAAGCAGCAGTGGGTTTTATTaGAGACACTGGTTTGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHTGGIKSECAQLGWRQSSSGFY*RHWFAR Trigger: TCTAGCAAACCAGTGTCTGCAATAAAACCCACTGCT...GCTTTGCCTCCATCCCAGCTGTGCACACTCTGACTTGATGCCACCTGTGTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR CCA 90 bp | GATAACGACATTGTGGTTGCCAACAATGATGGAGGCTGTAAAGCCTCGAGGGTCTCTTGCACACAGCCGTaGTTTGGAAGAAGCGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: DNDIVVANNDGGCKASRVSCTQP*FGRSEP Trigger: GGGTTCGCTTCTTCCAAACCACGGCTGTGTGCAAGA...GACCCTCGAGGCTTTACAGCCTCCATCATTGTTGGCAACCACAATGTCGTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| 3UTR CAA 72 bp | CAGCAGATGAGAGGTGTGTGGGAAAGTAAGGCTCTGTaGAAGCCTCTACTCCATCATGCCTATCCATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQMRGVWESKAL*KPLLHHAYPLG Trigger: CCCCAATGGATAGGCATGATGGAGTAGAGGCTTCAACAGAGCCTTACTTTCCCACACACCTCTCATCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR CCA 90 bp | ACGAGGCCTAGGAGCGCTCAAAACCACTTAAGCATTTTACCATGCTTCAAGAATCAGGCCTGTCAAAGATaGCGTGCATGCCCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TRPRSAQNHLSILPCFKNQACQR*RACPGW Trigger: CCATCCTGGGCATGCACGCCATCTTTGACAGGCCTG...ATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR CCA 90 bp | ATAATGATGCACATGTGGCAACCAAGTCCAAATGGTATTAGGAGTGTTCGTGCCCAGGCCTGTCAAAGATaGCGTGCATGCCCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: IMMHMWQPSPNGIRSVRAQACQR*RACPGW Trigger: CCATCCTGGGCATGCACGCCATCTTTGACAGGCCTG...GGCACGAACACTCCTAATACCATTTGGACTTGGTTGCCACATGTGCATCATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| 3UTR CAA 72 bp | ATGCAAGCCCTTCAAAGGGAAACTGCCCCTGGTGTTTaGAAGGGGATTCACATAGGTGGGAGCCTCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: MQALQRETAPGV*KGIHIGGSLNF Trigger: GAAATTGAGGCTCCCACCTATGTGAATCCCCTTCAAAACACCAGGGGCAGTTTCCCTTTGAAGGGCTTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR TCA 90 bp | GATAACGACATTGTGGTTGCCAACAATGATGGAGGCTGTAAAGCCTCGAGGGTCGGGTGTTCCAAAAAGTaGGCCAAAAACTCCTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: DNDIVVANNDGGCKASRVGCSKK*AKNSSV Trigger: AACGGAGGAGTTTTTGGCTCACTTTTTGGAACACCC...GACCCTCGAGGCTTTACAGCCTCCATCATTGTTGGCAACCACAATGTCGTTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR GCA 90 bp | CGTAATTATGCCAAAATGAATCTTCCCAGTGCCAGCATACAATGGAGCCAGAGAGCTGGCGACGGAACCTaGACAGAAGTCTTGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNYAKMNLPSASIQWSQRAGDGT*TEVLSV Trigger: GACAGACAAGACTTCTGTGCAGGTTCCGTCGCCAGC...TCTCTGGCTCCATTGTATGCTGGCACTGGGAAGATTCATTTTGGCATAATTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR GCA 90 bp | GGGAACACTAAGAACAGACTTGTGAACGCTGGTTACATCGTGCCCTGGCTTCCGCACCACTTCCTTGGTTaGATCATCAATCACTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: GNTKNRLVNAGYIVPWLPHHFLG*IINHCI Trigger: AATGCAGTGATTGATGATGCAACCAAGGAAGTGGTG...CGGAAGCCAGGGCACGATGTAACCAGCGTTCACAAGTCTGTTCTTAGTGTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR CCA 90 bp | TGCTCACACCACCTGGAATTTAAAAGCTCTCTTCAGCCTGATCTTGTGAGAACATCTTGCACACAGCCGTaGTTTGGAAGAAGCGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: CSHHLEFKSSLQPDLVRTSCTQP*FGRSEP Trigger: GGGTTCGCTTCTTCCAAACCACGGCTGTGTGCAAGA...TGTTCTCACAAGATCAGGCTGAAGAGAGCTTTTAAATTCCAGGTGGTGTGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR GCA 90 bp | AAACCACTTAAGCATTTTACCATGCTTCAAGAATATTCCAACAACTGTACCTGCACCTTTAGCAGCTCCTaGCTCAGCCAGTGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPLKHFTMLQEYSNNCTCTFSSS*LSQWRG Trigger: GCCCCTCCACTGGCTGAGGCAGGAGCTGCTAAAGGT...GCAGGTACAGTTGTTGGAATATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR GCA 90 bp | TTCACTGAATTCCCCTACCAGCAGCAATTCTTAAGGACCCTGCTTCTTCCTGGGTGCATCATCAATCACTaGATTTACAACAGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTEFPYQQQFLRTLLLPGCIINH*IYNRLL Trigger: GAGCAGCCTGTTGTAAATGCAGTGATTGATGATGCA...CCCAGGAAGAAGCAGGGTCCTTAAGAATTGCTGCTGGTAGGGGAATTCAGTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGCTTATAATGATGCACATGTGGCAACCAAGTCCAAATGGTATTAGGAGTCTCTGCTTTGTGGGCTaGAGCAGGAGTTTCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HVLIMMHMWQPSPNGIRSLCFVG*SRSFSW Trigger: CCAGCTGAAACTCCTGCTCCAGCCCACAAAGCAGAG...ACTCCTAATACCATTTGGACTTGGTTGCCACATGTGCATCATTATAAGCACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR CCA 90 bp | GATAACGACATTGTGGTTGCCAACAATGATGGAGGCTGTAAAGCCTCGAGGGTCTTTTATTGCAGACACTaGTTTGCTAGAAGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DNDIVVANNDGGCKASRVFYCRH*FARRRL Trigger: CAGCCTCCTTCTAGCAAACCAGTGTCTGCAATAAAA...GACCCTCGAGGCTTTACAGCCTCCATCATTGTTGGCAACCACAATGTCGTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCACACCACCTGGAATTTAAAAGCTCTCTTCAGCCTGATCTTGTGAGAACAGGGTGTTCCAAAAAGTaGGCCAAAAACTCCTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSHHLEFKSSLQPDLVRTGCSKK*AKNSSV Trigger: AACGGAGGAGTTTTTGGCTCACTTTTTGGAACACCC...TGTTCTCACAAGATCAGGCTGAAGAGAGCTTTTAAATTCCAGGTGGTGTGAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR GCA 90 bp | ATAATGATGCACATGTGGCAACCAAGTCCAAATGGTATTAGGAGTGTTCGTGCCTTCCTCCTTCAACTTTaGCCCCATCGGGTACCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IMMHMWQPSPNGIRSVRAFLLQL*PHRVPK Trigger: TTTTGGTACCCGATGGGGGCAAAGTTGAAGGAGGAA...GGCACGAACACTCCTAATACCATTTGGACTTGGTTGCCACATGTGCATCATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTGCAGGATACGAGGCCTAGGAGCGCTCAAAACCACTTAAGCATTTTACCATGCATCATCAATCACTaGATTTACAACAGGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVQDTRPRSAQNHLSILPCIINH*IYNRLL Trigger: GAGCAGCCTGTTGTAAATGCAGTGATTGATGATGCA...TGGTAAAATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGTATCCTGCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR CCA 90 bp | ACGAGGCCTAGGAGCGCTCAAAACCACTTAAGCATTTTACCATGCTTCAAGAATAGACTCTGCAAACGCTaGGGTTTGGACTGTTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRPRSAQNHLSILPCFKNRLCKR*GLDCYH Trigger: GTGATAACAGTCCAAACCCCAGCGTTTGCAGAGTCT...ATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
||
| CDS-3UTR CCA 90 bp | ACCGTTCATAACCAGACATGTGCTTATAATGATGCACATGTGGCAACCAAGTCCAGACTCTGCAAACGCTaGGGTTTGGACTGTTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVHNQTCAYNDAHVATKSRLCKR*GLDCYH Trigger: GTGATAACAGTCCAAACCCCAGCGTTTGCAGAGTCT...GGACTTGGTTGCCACATGTGCATCATTATAAGCACATGTCTGGTTATGAACGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR CCA 90 bp | CATGTGCTTATAATGATGCACATGTGGCAACCAAGTCCAAATGGTATTAGGAGTGTGGAGGGGCAGCAGTaGGTTTTATTGCAGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: HVLIMMHMWQPSPNGIRSVEGQQ*VLLQTL Trigger: CAGTGTCTGCAATAAAACCCACTGCTGCCCCTCCAC...ACTCCTAATACCATTTGGACTTGGTTGCCACATGTGCATCATTATAAGCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| CDS-3UTR CCA 90 bp | GATAACGACATTGTGGTTGCCAACAATGATGGAGGCTGTAAAGCCTCGAGGGTCTATACACCACTTCCTTaGTTGCATCATCAATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: DNDIVVANNDGGCKASRVYTPLP*LHHQSL Trigger: CAGTGATTGATGATGCAACCAAGGAAGTGGTGTATA...GACCCTCGAGGCTTTACAGCCTCCATCATTGTTGGCAACCACAATGTCGTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
||
| 3UTR CAA 72 bp | GCTCTCATCTCTTGTATGTTACTCATGTCAACCTCATaGAAAGTCGTCAGCATTGCACACGTGTTCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALISCMLLMSTS*KVVSIAHVFWA Trigger: AGCCCAGAACACGTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAACATACAAGAGATGAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223332.2 |
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| CDS-3UTR GCA 90 bp | ATGGTCCCTGGTGGTATCCCTATAGCATACTGTTACTGGAGAAAAGCAAAATTGTTCCTCCTTCAACTTTaGCCCCATCGGGTACCAAAA | + |
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Preference number: 4 (lower is better) Translates to: MVPGGIPIAYCYWRKAKLFLLQL*PHRVPK Trigger: TTTTGGTACCCGATGGGGGCAAAGTTGAAGGAGGAA...CAATTTTGCTTTTCTCCAGTAACAGTATGCTATAGGGATACCACCAGGGACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS-3UTR CCA 90 bp | TCAGTGCAGGATACGAGGCCTAGGAGCGCTCAAAACCACTTAAGCATTTTACCATATACACCACTTCCTTaGTTGCATCATCAATCACTG | + |
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Preference number: 4 (lower is better) Translates to: SVQDTRPRSAQNHLSILPYTPLP*LHHQSL Trigger: CAGTGATTGATGATGCAACCAAGGAAGTGGTGTATA...TGGTAAAATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGTATCCTGCACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS-3UTR TCA 90 bp | ATATGGGATGGGGGCTTGGTATGCTGCTCAGAGATAAGAATATACAAAGATCCTTCATGTCAACCTCATTaGAAGTCGTCAGCATTGCAC | + |
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Preference number: 4 (lower is better) Translates to: IWDGGLVCCSEIRIYKDPSCQPH*KSSALH Trigger: GTGCAATGCTGACGACTTTCAATGAGGTTGACATGA...AGGATCTTTGTATATTCTTATCTCTGAGCAGCATACCAAGCCCCCATCCCATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| CDS-3UTR CCA 90 bp | TGCTCACACCACCTGGAATTTAAAAGCTCTCTTCAGCCTGATCTTGTGAGAACATTTTATTGCAGACACTaGTTTGCTAGAAGGAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: CSHHLEFKSSLQPDLVRTFYCRH*FARRRL Trigger: CAGCCTCCTTCTAGCAAACCAGTGTCTGCAATAAAA...TGTTCTCACAAGATCAGGCTGAAGAGAGCTTTTAAATTCCAGGTGGTGTGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS-3UTR CCA 90 bp | AAACCACTTAAGCATTTTACCATGCTTCAAGAATATTCCAACAACTGTACCTGCGTGGAGGGGCAGCAGTaGGTTTTATTGCAGACACTG | + |
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Preference number: 4 (lower is better) Translates to: KPLKHFTMLQEYSNNCTCVEGQQ*VLLQTL Trigger: CAGTGTCTGCAATAAAACCCACTGCTGCCCCTCCAC...GCAGGTACAGTTGTTGGAATATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS-3UTR GCA 90 bp | CATGTGCTTATAATGATGCACATGTGGCAACCAAGTCCAAATGGTATTAGGAGTAGCAGTGGGTTTTATTaGAGACACTGGTTTGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: HVLIMMHMWQPSPNGIRSSSGFY*RHWFAR Trigger: TCTAGCAAACCAGTGTCTGCAATAAAACCCACTGCT...ACTCCTAATACCATTTGGACTTGGTTGCCACATGTGCATCATTATAAGCACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| CDS-3UTR CAA 90 bp | GTGCCCTGCACCAGAGGCAACAAGACCTTGCTCCCCACAGGCCACATCCCAGGGGGTCGAACTTCCACCTaGCCTCCCACAGCCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: VPCTRGNKTLLPTGHIPGGRTST*PPTATG Trigger: GCCTGTGGCTGTGGGAGGCAAGGTGGAAGTTCGACC...CCCTGGGATGTGGCCTGTGGGGAGCAAGGTCTTGTTGCCTCTGGTGCAGGGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS-3UTR CAA 90 bp | CTCGTCGCTGTCCTAACTCCTGAGGCTGGTTCCCACCGCAGTCCACCCTCCCCTCCGAGCTCTCATCTCTaGTATGTTACTCATGTCAAC | + |
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Preference number: 5 (lower is better) Translates to: LVAVLTPEAGSHRSPPSPPSSHL*YVTHVN Trigger: GTTGACATGAGTAACATACAAGAGATGAGAGCTCGG...AGGGGAGGGTGGACTGCGGTGGGAACCAGCCTCAGGAGTTAGGACAGCGACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS-3UTR CAA 90 bp | ATGGTATTAGGAGTGTTCGTGCCTCCCCACTCTATCTCAGAAATGATGCAAGCCGGTCGAACTTCCACCTaGCCTCCCACAGCCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: MVLGVFVPPHSISEMMQAGRTST*PPTATG Trigger: GCCTGTGGCTGTGGGAGGCAAGGTGGAAGTTCGACC...GGCTTGCATCATTTCTGAGATAGAGTGGGGAGGCACGAACACTCCTAATACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| CDS-3UTR CAA 90 bp | ATAATGATGCACATGTGGCAACCAAGTCCAAATGGTATTAGGAGTGTTCGTGCCGCTGCGGGCTCTGCTTaGTGGGCTGGAGCAGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: IMMHMWQPSPNGIRSVRAAAGSA*WAGAGV Trigger: AACTCCTGCTCCAGCCCACAAAGCAGAGCCCGCAGC...GGCACGAACACTCCTAATACCATTTGGACTTGGTTGCCACATGTGCATCATTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| CDS-3UTR CAA 90 bp | CAGAGTGTGCACAGCTGGGATGGAGGCAAAGCATCCCCTAGGCATCTCTGGAGAACACCACTTCCTTGGTaGCATCATCAATCACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: QSVHSWDGGKASPRHLWRTPLPW*HHQSLH Trigger: ATGCAGTGATTGATGATGCAACCAAGGAAGTGGTGT...TCTCCAGAGATGCCTAGGGGATGCTTTGCCTCCATCCCAGCTGTGCACACTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS-3UTR CAA 90 bp | GGGAACACTAAGAACAGACTTGTGAACGCTGGTTACATCGTGCCCTGGCTTCCGCTCATGTCAACCTCATaGAAAGTCGTCAGCATTGCA | + |
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Preference number: 5 (lower is better) Translates to: GNTKNRLVNAGYIVPWLPLMSTS*KVVSIA Trigger: TGCAATGCTGACGACTTTCAATGAGGTTGACATGAG...CGGAAGCCAGGGCACGATGTAACCAGCGTTCACAAGTCTGTTCTTAGTGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS CCA 90 bp | GGGGTTTGGACTGTTATCACATCATTCTTGCACACAGCCGTGGTTTaGAAGAAGCGAACCCTGAAGACGCTACCACTGTTAATGACCATC | + |
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Preference number: 5 (lower is better) Translates to: GVWTVITSFLHTAVV*KKRTLKTLPLLMTI Trigger: GATGGTCATTAACAGTGGTAGCGTCTTCAGGGTTCGCTTCTTCCAAACCACGGCTGTGTGCAAGAATGATGTGATAACAGTCCAAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053811.10 ENSMUST00000221357.2 |
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| CDS TCA 90 bp | TGTGCCGAGCTCTCATCTCTTGTATGTTACTCATGTCAACCTCATTaGAAGTCGTCAGCATTGCACACGTGTTCTGGGCTTCCTTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: CAELSSLVCYSCQPH*KSSALHTCSGLPSD Trigger: GTCTGAAGGAAGCCCAGAACACGTGTGCAATGCTGACGACTTTCAATGAGGTTGACATGAGTAACATACAAGAGATGAGAGCTCGGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053811.10 ENSMUST00000221357.2 |
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| CDS-3UTR CAA 90 bp | TCAGTGCAGGATACGAGGCCTAGGAGCGCTCAAAACCACTTAAGCATTTTACCAACCTGCACAGAAGTCTaGTCTGTCTCAATCTCACAC | + |
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Preference number: 5 (lower is better) Translates to: SVQDTRPRSAQNHLSILPTCTEV*SVSISH Trigger: GTGTGAGATTGAGACAGACAAGACTTCTGTGCAGGT...TGGTAAAATGCTTAAGTGGTTTTGAGCGCTCCTAGGCCTCGTATCCTGCACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS-3UTR CAA 90 bp | AACGACATTGTGGTTGCCAACAATGATGGAGGCTGTAAAGCCTCGAGGGTCAAAACCTGCACAGAAGTCTaGTCTGTCTCAATCTCACAC | + |
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Preference number: 5 (lower is better) Translates to: NDIVVANNDGGCKASRVKTCTEV*SVSISH Trigger: GTGTGAGATTGAGACAGACAAGACTTCTGTGCAGGT...TTTGACCCTCGAGGCTTTACAGCCTCCATCATTGTTGGCAACCACAATGTCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| CDS-3UTR CAA 90 bp | AAACCACTTAAGCATTTTACCATGCTTCAAGAATATTCCAACAACTGTACCTGCGCTGCGGGCTCTGCTTaGTGGGCTGGAGCAGGAGTT | + |
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Preference number: 5 (lower is better) Translates to: KPLKHFTMLQEYSNNCTCAAGSA*WAGAGV Trigger: AACTCCTGCTCCAGCCCACAAAGCAGAGCCCGCAGC...GCAGGTACAGTTGTTGGAATATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS-3UTR CAA 90 bp | GTTGCCAACAATGATGGAGGCTGTAAAGCCTCGAGGGTCAAAAGGAGCACAGATCTCATGTCAACCTCATaGAAAGTCGTCAGCATTGCA | + |
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Preference number: 5 (lower is better) Translates to: VANNDGGCKASRVKRSTDLMSTS*KVVSIA Trigger: TGCAATGCTGACGACTTTCAATGAGGTTGACATGAG...ATCTGTGCTCCTTTTGACCCTCGAGGCTTTACAGCCTCCATCATTGTTGGCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| CDS-3UTR CAA 90 bp | TTCACTGAATTCCCCTACCAGCAGCAATTCTTAAGGACCCTGCTTCTTCCTGGGCCGAGCTCTCATCTCTaGTATGTTACTCATGTCAAC | + |
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Preference number: 5 (lower is better) Translates to: FTEFPYQQQFLRTLLLPGPSSHL*YVTHVN Trigger: GTTGACATGAGTAACATACAAGAGATGAGAGCTCGG...CCCAGGAAGAAGCAGGGTCCTTAAGAATTGCTGCTGGTAGGGGAATTCAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| CDS-3UTR CAA 90 bp | GGTGATAACGACATTGTGGTTGCCAACAATGATGGAGGCTGTAAAGCCTCGAGGACACCACTTCCTTGGTaGCATCATCAATCACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: GDNDIVVANNDGGCKASRTPLPW*HHQSLH Trigger: ATGCAGTGATTGATGATGCAACCAAGGAAGTGGTGT...CCTCGAGGCTTTACAGCCTCCATCATTGTTGGCAACCACAATGTCGTTATCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221357.2 |
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| CDS-3UTR CAA 90 bp | AAACCACTTAAGCATTTTACCATGCTTCAAGAATATTCCAACAACTGTACCTGCATTGCAGACACTGGTTaGCTAGAAGGAGGCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: KPLKHFTMLQEYSNNCTCIADTG*LEGGCE Trigger: CTCACAGCCTCCTTCTAGCAAACCAGTGTCTGCAAT...GCAGGTACAGTTGTTGGAATATTCTTGAAGCATGGTAAAATGCTTAAGTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053811.10 |
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| CDS CAA 90 bp | TGGGGTTTGGACTGTTATCACATCATTCTTGCACACAGCCGTGGTTaGGAAGAAGCGAACCCTGAAGACGCTACCACTGTTAATGACCAT | + |
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Preference number: 6 (lower is better) Translates to: WGLDCYHIILAHSRG*EEANPEDATTVNDH Trigger: ATGGTCATTAACAGTGGTAGCGTCTTCAGGGTTCGCTTCTTCCAAACCACGGCTGTGTGCAAGAATGATGTGATAACAGTCCAAACCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053811.10 ENSMUST00000221357.2 |
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