Pregenerated sensors for DLL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003436Ensembl transcript IDs: ENSMUST00000108315.4
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR CCA 90 bp | ATGCCAGCACTTAGGGGGCAGAAGCAGGTGGATCTCTGTGAGTTCGAGGCCAGCGTTGCAGGGGGAGCGTaGGGTCCCGAGGCCTGGGCC | + |
Preference number: 4 (lower is better) Translates to: MPALRGQKQVDLCEFEASVAGGA*GPEAWA Trigger: GGCCCAGGCCTCGGGACCCCACGCTCCCCCTGCAAC...GCTGGCCTCGAACTCACAGAGATCCACCTGCTTCTGCCCCCTAAGTGCTGGCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR TCA 90 bp | TTCGAGGCCAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGACGAGGGGGCACTGCGTaGGCGGCACAGGCGCGCGCA | + |
Preference number: 4 (lower is better) Translates to: FEASLVYRVLGWPGLLQRRGGTA*AAQARA Trigger: TGCGCGCGCCTGTGCCGCTCACGCAGTGCCCCCTCG...TCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTGGCCTCGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR GCA 90 bp | ATGCCAGCACTTAGGGGGCAGAAGCAGGTGGATCTCTGTGAGTTCGAGGCCAGCAAGGGCCTCGGGCGTTaGAGGGGGAGCGTGGGGTCC | + |
Preference number: 4 (lower is better) Translates to: MPALRGQKQVDLCEFEASKGLGR*RGSVGS Trigger: GGACCCCACGCTCCCCCTGCAACGCCCGAGGCCCTT...GCTGGCCTCGAACTCACAGAGATCCACCTGCTTCTGCCCCCTAAGTGCTGGCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR GCA 90 bp | ATGCCAGCACTTAGGGGGCAGAAGCAGGTGGATCTCTGTGAGTTCGAGGCCAGCACTCCCATGTGCCTGTaGGCTGCACATCGCGGGCCC | + |
Preference number: 4 (lower is better) Translates to: MPALRGQKQVDLCEFEASTPMCL*AAHRGP Trigger: GGGCCCGCGATGTGCAGCGCACAGGCACATGGGAGT...GCTGGCCTCGAACTCACAGAGATCCACCTGCTTCTGCCCCCTAAGTGCTGGCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR TCA 90 bp | ATGCCAGCACTTAGGGGGCAGAAGCAGGTGGATCTCTGTGAGTTCGAGGCCAGCCACACAAGCCGCCATTaGAGCAGGGTCCATCTGCGC | + |
Preference number: 4 (lower is better) Translates to: MPALRGQKQVDLCEFEASHTSRH*SRVHLR Trigger: GCGCAGATGGACCCTGCTTCAATGGCGGCTTGTGTG...GCTGGCCTCGAACTCACAGAGATCCACCTGCTTCTGCCCCCTAAGTGCTGGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR TCA 90 bp | TTCGAGGCCAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGAGTCCATCTGCGCACGTaGCCCCGCTCACCTCACATC | + |
Preference number: 4 (lower is better) Translates to: FEASLVYRVLGWPGLLQRVHLRT*PRSPHI Trigger: GATGTGAGGTGAGCGGGGTCACGTGCGCAGATGGAC...TCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTGGCCTCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR TCA 90 bp | GTTCGAGGCCAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGCAGAGGCCGCCATTCTaGCATGGCTGCAGGCTACAG | + |
Preference number: 4 (lower is better) Translates to: VRGQPGLQSSRLARAFTEQRPPF*HGCRLQ Trigger: CTGTAGCCTGCAGCCATGTCAGAATGGCGGCCTCTG...CTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTGGCCTCGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | TTCGAGGCCAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGAGCACTCGTCTGGGAATaGCGTGCAGGGTCGCAGTCC | + |
Preference number: 4 (lower is better) Translates to: FEASLVYRVLGWPGLLQRALVWE*RAGSQS Trigger: GGACTGCGACCCTGCACGCCATTCCCAGACGAGTGC...TCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTGGCCTCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR GCA 90 bp | CAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGAGGAAACTCGAAGCAGGGTCCATCTaGGCACGTGACCCCGCTCAC | + |
Preference number: 4 (lower is better) Translates to: QPGLQSSRLARAFTERKLEAGSI*ARDPAH Trigger: GTGAGCGGGGTCACGTGCGCAGATGGACCCTGCTTC...GAGTTTCCTCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | TTCGAGGCCAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGAGCCGCCATTCTGACATaGCTGCAGGCTACAGCGGTC | + |
Preference number: 4 (lower is better) Translates to: FEASLVYRVLGWPGLLQRAAILT*LQATAV Trigger: GACCGCTGTAGCCTGCAGCCATGTCAGAATGGCGGC...TCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTGGCCTCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | TTCGAGGCCAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGACAGAAGAAAGCGCTGTaGATCCGCCTGCCTCAGGCC | + |
Preference number: 4 (lower is better) Translates to: FEASLVYRVLGWPGLLQRQKKAL*IRLPQA Trigger: GGCCTGAGGCAGGCGGATCCACAGCGCTTTCTTCTG...TCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTGGCCTCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR TCA 90 bp | TTCGAGGCCAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGACCAGCTGGCAGTGCCTaGGGAAGAAGAAAAGCCAGG | + |
Preference number: 4 (lower is better) Translates to: FEASLVYRVLGWPGLLQRPAGSA*GRRKAR Trigger: CCTGGCTTTTCTTCTTCCTCAGGCACTGCCAGCTGG...TCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTGGCCTCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | TTCGAGGCCAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGAGCCCCCATTGGCACATaGGTTCCCATCACAAGGTCC | + |
Preference number: 4 (lower is better) Translates to: FEASLVYRVLGWPGLLQRAPIGT*VPITRS Trigger: GGACCTTGTGATGGGAACCCATGTGCCAATGGGGGC...TCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTGGCCTCGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | ATGCCAGCACTTAGGGGGCAGAAGCAGGTGGATCTCTGTGAGTTCGAGGCCAGCGCCTTGGAAACCAGGTaGGCAATGACAGACATAGGC | + |
Preference number: 4 (lower is better) Translates to: MPALRGQKQVDLCEFEASALETR*AMTDIG Trigger: GCCTATGTCTGTCATTGCCCACCTGGTTTCCAAGGC...GCTGGCCTCGAACTCACAGAGATCCACCTGCTTCTGCCCCCTAAGTGCTGGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR GCA 90 bp | GAGAGGAAACTCTATCCTGGGAAAATAAAAAGTTCTCAGCCTGATGTGGTTGAGCAGTCGTCCAGGTCGTaGTCGCAGCGCGGCCCGGCG | + |
Preference number: 4 (lower is better) Translates to: ERKLYPGKIKSSQPDVVEQSSRS*SQRGPA Trigger: CGCCGGGCCGCGCTGCGAGCACGACCTGGACGACTG...CTCAACCACATCAGGCTGAGAACTTTTTATTTTCCCAGGATAGAGTTTCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | CAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGAGGAAACTCAGTTCAGGCAGCTACTaGTGGAGACAGGGACCGTGC | + |
Preference number: 4 (lower is better) Translates to: QPGLQSSRLARAFTERKLSSGSY*WRQGPC Trigger: GCACGGTCCCTGTCTCCACCAGTAGCTGCCTGAACT...GAGTTTCCTCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR TCA 90 bp | CAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGAGGAAACTCGTAACCTCAGGTTGTTaGGTGCATCCGGGAGCGTGT | + |
Preference number: 4 (lower is better) Translates to: QPGLQSSRLARAFTERKLVTSGC*VHPGAC Trigger: ACACGCTCCCGGATGCACTCAACAACCTGAGGTTAC...GAGTTTCCTCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | GTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGAGGAAACTCTATCCTGCCCGAGGCCTGGGCCTaGCCCGAAAGAATGAATTTG | + |
Preference number: 4 (lower is better) Translates to: VYRVLGWPGLLQRGNSILPEAWA*PERMNL Trigger: CAAATTCATTCTTTCGGGCCAGGCCCAGGCCTCGGG...CAGGATAGAGTTTCCTCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | GGGGAGGTAGAGATTGGACACCACAAAGTAAATAAAATCATTCAGGCTCCATCTGCATCCGGGAGCGTGTaGACCGAAGGCTCCCGGGTC | + |
Preference number: 4 (lower is better) Translates to: GEVEIGHHKVNKIIQAPSASGSV*TEGSRV Trigger: GACCCGGGAGCCTTCGGTCCACACGCTCCCGGATGC...AGATGGAGCCTGAATGATTTTATTTACTTTGTGGTGTCCAATCTCTACCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR TCA 90 bp | GAGAGGAAACTCTATCCTGGGAAAATAAAAAGTTCTCAGCCTGATGTGGTTGAGGCTTCAGGCAGACCCTaGAGAAGAGGCGGCAAGGGC | + |
Preference number: 4 (lower is better) Translates to: ERKLYPGKIKSSQPDVVEASGRP*RRGGKG Trigger: GCCCTTGCCGCCTCTTCTTCAGGGTCTGCCTGAAGC...CTCAACCACATCAGGCTGAGAACTTTTTATTTTCCCAGGATAGAGTTTCCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | AAAAGTTCTCAGCCTGATGTGGTTGAGCAAAATAAGAACCTTTATAGATGTCTCCGGCAGCGCAACGCGTaGCCCAGGTCCAGGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: KSSQPDVVEQNKNLYRCLRQRNA*PRSRQR Trigger: CCTCTGCCTGGACCTGGGCCACGCGTTGCGCTGCCG...GAGACATCTATAAAGGTTCTTATTTTGCTCAACCACATCAGGCTGAGAACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR TCA 90 bp | GAGAGGAAACTCTATCCTGGGAAAATAAAAAGTTCTCAGCCTGATGTGGTTGAGCTCTCCAGGTTTCAATaGCGAGGGAGAAGGTGCCCG | + |
Preference number: 4 (lower is better) Translates to: ERKLYPGKIKSSQPDVVELSRFQ*RGRRCP Trigger: CGGGCACCTTCTCCCTCGTCATTGAAACCTGGAGAG...CTCAACCACATCAGGCTGAGAACTTTTTATTTTCCCAGGATAGAGTTTCCTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR GCA 90 bp | GAGATTGGACACCACAAAGTAAATAAAATCATTCAGGCTCCATCTCCAGGCGATCCTCAGGTTGTTGAGTaGATCCGGGAGCGTGTGGAC | + |
Preference number: 4 (lower is better) Translates to: EIGHHKVNKIIQAPSPGDPQVVE*IRERVD Trigger: GTCCACACGCTCCCGGATGCACTCAACAACCTGAGG...ATCGCCTGGAGATGGAGCCTGAATGATTTTATTTACTTTGTGGTGTCCAATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR GCA 90 bp | GAGGTAGAGATTGGACACCACAAAGTAAATAAAATCATTCAGGCTCCATCTCCAGACACCAGCTGGCAGTaGCTGAGGAAGAAGAAAAGC | + |
Preference number: 4 (lower is better) Translates to: EVEIGHHKVNKIIQAPSPDTSWQ*LRKKKS Trigger: GCTTTTCTTCTTCCTCAGGCACTGCCAGCTGGTGTC...TGGAGATGGAGCCTGAATGATTTTATTTACTTTGTGGTGTCCAATCTCTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR TCA 90 bp | GAGAGGAAACTCTATCCTGGGAAAATAAAAAGTTCTCAGCCTGATGTGGTTGAGCCTGGCCCGAAAGAATaGATTTGTAGCTCGAAGACA | + |
Preference number: 4 (lower is better) Translates to: ERKLYPGKIKSSQPDVVEPGPKE*ICSSKT Trigger: TGTCTTCGAGCTACAAATTCATTCTTTCGGGCCAGG...CTCAACCACATCAGGCTGAGAACTTTTTATTTTCCCAGGATAGAGTTTCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | AAAAGTTCTCAGCCTGATGTGGTTGAGCAAAATAAGAACCTTTATAGATGTCTCTACAGCTGCCCCCATTaGCACATGGGTTCCCATCAC | + |
Preference number: 4 (lower is better) Translates to: KSSQPDVVEQNKNLYRCLYSCPH*HMGSHH Trigger: GTGATGGGAACCCATGTGCCAATGGGGGCAGCTGTA...GAGACATCTATAAAGGTTCTTATTTTGCTCAACCACATCAGGCTGAGAACTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR GCA 90 bp | AAAAGTTCTCAGCCTGATGTGGTTGAGCAAAATAAGAACCTTTATAGATGTCTCAGGTTTCACTACAGCTaGCCCCATTGGCACATGGGT | + |
Preference number: 4 (lower is better) Translates to: KSSQPDVVEQNKNLYRCLRFHYS*PHWHMG Trigger: ACCCATGTGCCAATGGGGGCAGCTGTAGTGAAACCT...GAGACATCTATAAAGGTTCTTATTTTGCTCAACCACATCAGGCTGAGAACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CCA 90 bp | AAAAGTTCTCAGCCTGATGTGGTTGAGCAAAATAAGAACCTTTATAGATGTCTCATAAATGGAAGGGGCTaGTATGACATAAATGGATCT | + |
Preference number: 4 (lower is better) Translates to: KSSQPDVVEQNKNLYRCLINGRG*YDINGS Trigger: AGATCCATTTATGTCATACCAGCCCCTTCCATTTAT...GAGACATCTATAAAGGTTCTTATTTTGCTCAACCACATCAGGCTGAGAACTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 90 bp | ATGGCGTGCAGGGTCGCAGTCCCGGGCCACACCGCGAGGGGGCACTaGGTGAGCGGCACAGGCGCGCGCAGGCGGCCCCGACGGCGGGCG | + |
Preference number: 5 (lower is better) Translates to: MACRVAVPGHTARGH*VSGTGARRRPRRRA Trigger: CGCCCGCCGTCGGGGCCGCCTGCGCGCGCCTGTGCCGCTCACGCAGTGCCCCCTCGCGGTGTGGCCCGGGACTGCGACCCTGCACGCCAT 80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 90 bp | CGGGCGGCTCGCACCGCGCGCGGTAGGAGAAGTGCAACTCCCATGTaGCTGTGCGCTGCACATCGCGGGCCCACGGGCCCCCAGCCGCCA | + |
Preference number: 5 (lower is better) Translates to: RAARTARGRRSATPM*LCAAHRGPTGPQPP Trigger: TGGCGGCTGGGGGCCCGTGGGCCCGCGATGTGCAGCGCACAGGCACATGGGAGTTGCACTTCTCCTACCGCGCGCGGTGCGAGCCGCCCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 90 bp | GCTCGCACCGCGCGCGGTAGGAGAAGTGCAACTCCCATGTGCCTGTaGGCTGCACATCGCGGGCCCACGGGCCCCCAGCCGCCAGGCGTC | + |
Preference number: 5 (lower is better) Translates to: ARTARGRRSATPMCL*AAHRGPTGPQPPGV Trigger: GACGCCTGGCGGCTGGGGGCCCGTGGGCCCGCGATGTGCAGCGCACAGGCACATGGGAGTTGCACTTCTCCTACCGCGCGCGGTGCGAGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 90 bp | GGGGCTGCAGCCTGGTCGACACACAGACGGGGCTTCGCACTCGTCTaGGAATGGCGTGCAGGGTCGCAGTCCCGGGCCACACCGCGAGGG | + |
Preference number: 5 (lower is better) Translates to: GAAAWSTHRRGFALV*EWRAGSQSRATPRG Trigger: CCCTCGCGGTGTGGCCCGGGACTGCGACCCTGCACGCCATTCCCAGACGAGTGCGAAGCCCCGTCTGTGTGTCGACCAGGCTGCAGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS TCA 90 bp | GGGACTCGGTGGCCTCCTGGGAGACTCCGGGCTTCAGGCAGACCCTaGAGAAGAGGCGGCAAGGGCCTCGGGCGTTGCAGGGGGAGCGTG | + |
Preference number: 5 (lower is better) Translates to: GTRWPPGRLRASGRP*RRGGKGLGRCRGSV Trigger: CACGCTCCCCCTGCAACGCCCGAGGCCCTTGCCGCCTCTTCTTCAGGGTCTGCCTGAAGCCCGGAGTCTCCCAGGAGGCCACCGAGTCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 90 bp | CTCTCCGGGGTGCTCCGTATAGACCGGGACGCTCGTGCTCAGTGCTaGGCCCAGGGCGCACAGGGACTCGGTGGCCTCCTGGGAGACTCC | + |
Preference number: 5 (lower is better) Translates to: LSGVLRIDRDARAQC*AQGAQGLGGLLGDS Trigger: GGAGTCTCCCAGGAGGCCACCGAGTCCCTGTGCGCCCTGGGCGCAGCACTGAGCACGAGCGTCCCGGTCTATACGGAGCACCCCGGAGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 90 bp | CTGGTCGACACACAGACGGGGCTTCGCACTCGTCTGGGAATGGCGTaGAGGGTCGCAGTCCCGGGCCACACCGCGAGGGGGCACTGCGTG | + |
Preference number: 5 (lower is better) Translates to: LVDTQTGLRTRLGMA*RVAVPGHTARGHCV Trigger: CACGCAGTGCCCCCTCGCGGTGTGGCCCGGGACTGCGACCCTGCACGCCATTCCCAGACGAGTGCGAAGCCCCGTCTGTGTGTCGACCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 90 bp | GCAGCCTGGTCGACACACAGACGGGGCTTCGCACTCGTCTGGGAATaGCGTGCAGGGTCGCAGTCCCGGGCCACACCGCGAGGGGGCACT | + |
Preference number: 5 (lower is better) Translates to: AAWSTHRRGFALVWE*RAGSQSRATPRGGT Trigger: AGTGCCCCCTCGCGGTGTGGCCCGGGACTGCGACCCTGCACGCCATTCCCAGACGAGTGCGAAGCCCCGTCTGTGTGTCGACCAGGCTGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS TCA 90 bp | GAAGGGCACACGTACGAGGCCATCAGGCAGCGGCAGGGCAGCCGCTaGCTCTCCGGGGTGCTCCGTATAGACCGGGACGCTCGTGCTCAG | + |
Preference number: 5 (lower is better) Translates to: EGHTYEAIRQRQGSR*LSGVLRIDRDARAQ Trigger: CTGAGCACGAGCGTCCCGGTCTATACGGAGCACCCCGGAGAGTCAGCGGCTGCCCTGCCGCTGCCTGATGGCCTCGTACGTGTGCCCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 90 bp | CAGTGCTGGCAGGACCAGGAACCCTGGAGTTCAGGCAGCTACTGGTaGAGACAGGGACCGTGCAGAGGGGTCCAGTCCAGCCCTCCAGGC | + |
Preference number: 5 (lower is better) Translates to: QCWQDQEPWSSGSYW*RQGPCRGVQSSPPG Trigger: GCCTGGAGGGCTGGACTGGACCCCTCTGCACGGTCCCTGTCTCCACCAGTAGCTGCCTGAACTCCAGGGTTCCTGGTCCTGCCAGCACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS TCA 90 bp | ACGAACTGGGGCCATCCCCAGCACCGTCTTGTAACCTCAGGTTGTTaGGTGCATCCGGGAGCGTGTGGACCGAAGGCTCCCGGGTCCCAG | + |
Preference number: 5 (lower is better) Translates to: TNWGHPQHRLVTSGC*VHPGACGPKAPGSQ Trigger: CTGGGACCCGGGAGCCTTCGGTCCACACGCTCCCGGATGCACTCAACAACCTGAGGTTACAAGACGGTGCTGGGGATGGCCCCAGTTCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 90 bp | ATCCAGTGCTGGCAGGACCAGGAACCCTGGAGTTCAGGCAGCTACTaGTGGAGACAGGGACCGTGCAGAGGGGTCCAGTCCAGCCCTCCA | + |
Preference number: 5 (lower is better) Translates to: IQCWQDQEPWSSGSY*WRQGPCRGVQSSPP Trigger: TGGAGGGCTGGACTGGACCCCTCTGCACGGTCCCTGTCTCCACCAGTAGCTGCCTGAACTCCAGGGTTCCTGGTCCTGCCAGCACTGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 90 bp | GCATTCATCAGGCTCTTCACAGTAGCCGTGCTCGGGGCTGCAGCCTaGTCGACACACAGACGGGGCTTCGCACTCGTCTGGGAATGGCGT | + |
Preference number: 5 (lower is better) Translates to: AFIRLFTVAVLGAAA*STHRRGFALVWEWR Trigger: ACGCCATTCCCAGACGAGTGCGAAGCCCCGTCTGTGTGTCGACCAGGCTGCAGCCCCGAGCACGGCTACTGTGAAGAGCCTGATGAATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 90 bp | GCACCGTCTTGTAACCTCAGGTTGTTGAGTGCATCCGGGAGCGTGTaGACCGAAGGCTCCCGGGTCCCAGAAAGCAGGCGAGTCCCGGTA | + |
Preference number: 5 (lower is better) Translates to: APSCNLRLLSASGSV*TEGSRVPESRRVPV Trigger: TACCGGGACTCGCCTGCTTTCTGGGACCCGGGAGCCTTCGGTCCACACGCTCCCGGATGCACTCAACAACCTGAGGTTACAAGACGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 90 bp | CCCGGGGACAGGCACATTCAAAGGAGCCAGAGGTTTCACTACAGCTaGCCCCATTGGCACATGGGTTCCCATCACAAGGTCCAGGCCCAG | + |
Preference number: 5 (lower is better) Translates to: PGDRHIQRSQRFHYS*PHWHMGSHHKVQAQ Trigger: CTGGGCCTGGACCTTGTGATGGGAACCCATGTGCCAATGGGGGCAGCTGTAGTGAAACCTCTGGCTCCTTTGAATGTGCCTGTCCCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 90 bp | ATGGGTTCCCATCACAAGGTCCAGGCCCAGGTAAAAGGCATCCAGTaGTGGCAGGACCAGGAACCCTGGAGTTCAGGCAGCTACTGGTGG | + |
Preference number: 5 (lower is better) Translates to: MGSHHKVQAQVKGIQ*WQDQEPWSSGSYWW Trigger: CCACCAGTAGCTGCCTGAACTCCAGGGTTCCTGGTCCTGCCAGCACTGGATGCCTTTTACCTGGGCCTGGACCTTGTGATGGGAACCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 90 bp | ATCTTCACCGCCAACACACAAGCCGCCATTGAAGCAGGGTCCATCTaGGCACGTGACCCCGCTCACCTCACATCGAAGCCCGTAGAATCC | + |
Preference number: 5 (lower is better) Translates to: IFTANTQAAIEAGSI*ARDPAHLTSKPVES Trigger: GGATTCTACGGGCTTCGATGTGAGGTGAGCGGGGTCACGTGCGCAGATGGACCCTGCTTCAATGGCGGCTTGTGTGTTGGCGGTGAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CAA 90 bp | TTCGAGGCCAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGAACACACAAGCCGCCATaGAAGCAGGGTCCATCTGCG | + |
Preference number: 5 (lower is better) Translates to: FEASLVYRVLGWPGLLQRTHKPP*KQGPSA Trigger: CGCAGATGGACCCTGCTTCAATGGCGGCTTGTGTGT...TCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTGGCCTCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 90 bp | AGGCACATTCAAAGGAGCCAGAGGTTTCACTACAGCTGCCCCCATTaGCACATGGGTTCCCATCACAAGGTCCAGGCCCAGGTAAAAGGC | + |
Preference number: 5 (lower is better) Translates to: RHIQRSQRFHYSCPH*HMGSHHKVQAQVKG Trigger: GCCTTTTACCTGGGCCTGGACCTTGTGATGGGAACCCATGTGCCAATGGGGGCAGCTGTAGTGAAACCTCTGGCTCCTTTGAATGTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 90 bp | ACAGCGGTCCACCCTCTTCTCACAGTTAGAGCCTTGGAAACCAGGTaGGCAATGACAGACATAGGCAGAGTCAGGATCTTCACCGCCAAC | + |
Preference number: 5 (lower is better) Translates to: TAVHPLLTVRALETR*AMTDIGRVRIFTAN Trigger: GTTGGCGGTGAAGATCCTGACTCTGCCTATGTCTGTCATTGCCCACCTGGTTTCCAAGGCTCTAACTGTGAGAAGAGGGTGGACCGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CAA 90 bp | CAGCCTGGTCTACAGAGTTCTAGGCTGGCCAGGGCTTTTACAGAGAGGAAACTCTGTAACCTCAGGTTGTaGAGTGCATCCGGGAGCGTG | + |
Preference number: 5 (lower is better) Translates to: QPGLQSSRLARAFTERKLCNLRL*SASGSV Trigger: CACGCTCCCGGATGCACTCAACAACCTGAGGTTACA...GAGTTTCCTCTCTGTAAAAGCCCTGGCCAGCCTAGAACTCTGTAGACCAGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CAA 90 bp | TGGTGCACGCCTTTAATGCCAGCACTTAGGGGGCAGAAGCAGGTGGATCTCTGTTCTTGTAACCTCAGGTaGTTGAGTGCATCCGGGAGC | + |
Preference number: 5 (lower is better) Translates to: WCTPLMPALRGQKQVDLCSCNLR*LSASGS Trigger: GCTCCCGGATGCACTCAACAACCTGAGGTTACAAGA...ACAGAGATCCACCTGCTTCTGCCCCCTAAGTGCTGGCATTAAAGGCGTGCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS-3UTR CAA 90 bp | GGGGAGGTAGAGATTGGACACCACAAAGTAAATAAAATCATTCAGGCTCCATCTCTACAGCTGCCCCCATaGGCACATGGGTTCCCATCA | + |
Preference number: 5 (lower is better) Translates to: GEVEIGHHKVNKIIQAPSLQLPP*AHGFPS Trigger: TGATGGGAACCCATGTGCCAATGGGGGCAGCTGTAG...AGATGGAGCCTGAATGATTTTATTTACTTTGTGGTGTCCAATCTCTACCTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | AGGAGCAGCGGCGCGAGCCGCCGCCCTCCACGCACGTaGCGCCGTTGGCACAGGCGCGGCCGGCGCAGTCGT | + |
Preference number: 6 (lower is better) Translates to: RSSGASRRPPRT*RRWHRRGRRSR Trigger: ACGACTGCGCCGGCCGCGCCTGTGCCAACGGCGGCACGTGCGTGGAGGGCGGCGGCTCGCGCCGCTGCTCCT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | AAGGCGGGAGGCAGAAGAAAGCGCTGTGGATCCGCCTaGCTCAGGCCCCGCGGGGCGGCGGGCACCGCGTCC | + |
Preference number: 6 (lower is better) Translates to: KAGGRRKRCGSA*LRPRGAAGTAS Trigger: GGACGCGGTGCCCGCCGCCCCGCGGGGCCTGAGGCAGGCGGATCCACAGCGCTTTCTTCTGCCTCCCGCCTT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | GCGCGCGGTAGGAGAAGTGCAACTCCCATGTGCCTGTaGGCTGCACATCGCGGGCCCACGGGCCCCCAGCCG | + |
Preference number: 6 (lower is better) Translates to: ARGRRSATPMCL*AAHRGPTGPQP Trigger: CGGCTGGGGGCCCGTGGGCCCGCGATGTGCAGCGCACAGGCACATGGGAGTTGCACTTCTCCTACCGCGCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | CGCACCGCGCGCGGTAGGAGAAGTGCAACTCCCATGTaGCTGTGCGCTGCACATCGCGGGCCCACGGGCCCC | + |
Preference number: 6 (lower is better) Translates to: RTARGRRSATPM*LCAAHRGPTGP Trigger: GGGGCCCGTGGGCCCGCGATGTGCAGCGCACAGGCACATGGGAGTTGCACTTCTCCTACCGCGCGCGGTGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | GGGGTGCTCCGTATAGACCGGGACGCTCGTGCTCAGTaGTGCGCCCAGGGCGCACAGGGACTCGGTGGCCTC | + |
Preference number: 6 (lower is better) Translates to: GVLRIDRDARAQ*CAQGAQGLGGL Trigger: GAGGCCACCGAGTCCCTGTGCGCCCTGGGCGCAGCACTGAGCACGAGCGTCCCGGTCTATACGGAGCACCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | ACACAGACGGGGCTTCGCACTCGTCTGGGAATGGCGTaGAGGGTCGCAGTCCCGGGCCACACCGCGAGGGGG | + |
Preference number: 6 (lower is better) Translates to: TQTGLRTRLGMA*RVAVPGHTARG Trigger: CCCCCTCGCGGTGTGGCCCGGGACTGCGACCCTGCACGCCATTCCCAGACGAGTGCGAAGCCCCGTCTGTGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 72 bp | TGCTCAGTGCTGCGCCCAGGGCGCACAGGGACTCGGTaGCCTCCTGGGAGACTCCGGGCTTCAGGCAGACCC | + |
Preference number: 6 (lower is better) Translates to: CSVLRPGRTGTR*PPGRLRASGRP Trigger: GGGTCTGCCTGAAGCCCGGAGTCTCCCAGGAGGCCACCGAGTCCCTGTGCGCCCTGGGCGCAGCACTGAGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | GTGCTCCGTATAGACCGGGACGCTCGTGCTCAGTGCTaGGCCCAGGGCGCACAGGGACTCGGTGGCCTCCTG | + |
Preference number: 6 (lower is better) Translates to: VLRIDRDARAQC*AQGAQGLGGLL Trigger: CAGGAGGCCACCGAGTCCCTGTGCGCCCTGGGCGCAGCACTGAGCACGAGCGTCCCGGTCTATACGGAGCAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | ACTCTCCGGGGTGCTCCGTATAGACCGGGACGCTCGTaGTCAGTGCTGCGCCCAGGGCGCACAGGGACTCGG | + |
Preference number: 6 (lower is better) Translates to: TLRGAPYRPGRS*SVLRPGRTGTR Trigger: CCGAGTCCCTGTGCGCCCTGGGCGCAGCACTGAGCACGAGCGTCCCGGTCTATACGGAGCACCCCGGAGAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS TCA 72 bp | TGGCCTCCTGGGAGACTCCGGGCTTCAGGCAGACCCTaGAGAAGAGGCGGCAAGGGCCTCGGGCGTTGCAGG | + |
Preference number: 6 (lower is better) Translates to: WPPGRLRASGRP*RRGGKGLGRCR Trigger: CCTGCAACGCCCGAGGCCCTTGCCGCCTCTTCTTCAGGGTCTGCCTGAAGCCCGGAGTCTCCCAGGAGGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS TCA 72 bp | ACGTACGAGGCCATCAGGCAGCGGCAGGGCAGCCGCTaGCTCTCCGGGGTGCTCCGTATAGACCGGGACGCT | + |
Preference number: 6 (lower is better) Translates to: TYEAIRQRQGSR*LSGVLRIDRDA Trigger: AGCGTCCCGGTCTATACGGAGCACCCCGGAGAGTCAGCGGCTGCCCTGCCGCTGCCTGATGGCCTCGTACGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 72 bp | TCGACACACAGACGGGGCTTCGCACTCGTCTGGGAATaGCGTGCAGGGTCGCAGTCCCGGGCCACACCGCGA | + |
Preference number: 6 (lower is better) Translates to: STHRRGFALVWE*RAGSQSRATPR Trigger: TCGCGGTGTGGCCCGGGACTGCGACCCTGCACGCCATTCCCAGACGAGTGCGAAGCCCCGTCTGTGTGTCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 72 bp | GCCTGGTCGACACACAGACGGGGCTTCGCACTCGTCTaGGAATGGCGTGCAGGGTCGCAGTCCCGGGCCACA | + |
Preference number: 6 (lower is better) Translates to: AWSTHRRGFALV*EWRAGSQSRAT Trigger: TGTGGCCCGGGACTGCGACCCTGCACGCCATTCCCAGACGAGTGCGAAGCCCCGTCTGTGTGTCGACCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 72 bp | AGGCTCTTCACAGTAGCCGTGCTCGGGGCTGCAGCCTaGTCGACACACAGACGGGGCTTCGCACTCGTCTGG | + |
Preference number: 6 (lower is better) Translates to: RLFTVAVLGAAA*STHRRGFALVW Trigger: CCAGACGAGTGCGAAGCCCCGTCTGTGTGTCGACCAGGCTGCAGCCCCGAGCACGGCTACTGTGAAGAGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CAA 90 bp | GCCGACGAACTGGGGCCATCCCCAGCACCGTCTTGTAACCTCAGGTaGTTGAGTGCATCCGGGAGCGTGTGGACCGAAGGCTCCCGGGTC | + |
Preference number: 6 (lower is better) Translates to: ADELGPSPAPSCNLR*LSASGSVWTEGSRV Trigger: GACCCGGGAGCCTTCGGTCCACACGCTCCCGGATGCACTCAACAACCTGAGGTTACAAGACGGTGCTGGGGATGGCCCCAGTTCGTCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 72 bp | TGGCAGGACCAGGAACCCTGGAGTTCAGGCAGCTACTaGTGGAGACAGGGACCGTGCAGAGGGGTCCAGTCC | + |
Preference number: 6 (lower is better) Translates to: WQDQEPWSSGSY*WRQGPCRGVQS Trigger: GGACTGGACCCCTCTGCACGGTCCCTGTCTCCACCAGTAGCTGCCTGAACTCCAGGGTTCCTGGTCCTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CAA 90 bp | GACGAACTGGGGCCATCCCCAGCACCGTCTTGTAACCTCAGGTTGTaGAGTGCATCCGGGAGCGTGTGGACCGAAGGCTCCCGGGTCCCA | + |
Preference number: 6 (lower is better) Translates to: DELGPSPAPSCNLRL*SASGSVWTEGSRVP Trigger: TGGGACCCGGGAGCCTTCGGTCCACACGCTCCCGGATGCACTCAACAACCTGAGGTTACAAGACGGTGCTGGGGATGGCCCCAGTTCGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS TCA 72 bp | GGCCATCCCCAGCACCGTCTTGTAACCTCAGGTTGTTaGGTGCATCCGGGAGCGTGTGGACCGAAGGCTCCC | + |
Preference number: 6 (lower is better) Translates to: GHPQHRLVTSGC*VHPGACGPKAP Trigger: GGGAGCCTTCGGTCCACACGCTCCCGGATGCACTCAACAACCTGAGGTTACAAGACGGTGCTGGGGATGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | GCCAACACACAAGCCGCCATTGAAGCAGGGTCCATCTaGGCACGTGACCCCGCTCACCTCACATCGAAGCCC | + |
Preference number: 6 (lower is better) Translates to: ANTQAAIEAGSI*ARDPAHLTSKP Trigger: GGGCTTCGATGTGAGGTGAGCGGGGTCACGTGCGCAGATGGACCCTGCTTCAATGGCGGCTTGTGTGTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CAA 72 bp | GGGCCATCCCCAGCACCGTCTTGTAACCTCAGGTTGTaGAGTGCATCCGGGAGCGTGTGGACCGAAGGCTCC | + |
Preference number: 6 (lower is better) Translates to: GPSPAPSCNLRL*SASGSVWTEGS Trigger: GGAGCCTTCGGTCCACACGCTCCCGGATGCACTCAACAACCTGAGGTTACAAGACGGTGCTGGGGATGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CAA 72 bp | CTGGGGCCATCCCCAGCACCGTCTTGTAACCTCAGGTaGTTGAGTGCATCCGGGAGCGTGTGGACCGAAGGC | + |
Preference number: 6 (lower is better) Translates to: LGPSPAPSCNLR*LSASGSVWTEG Trigger: GCCTTCGGTCCACACGCTCCCGGATGCACTCAACAACCTGAGGTTACAAGACGGTGCTGGGGATGGCCCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS TCA 72 bp | CAGCATGCTCTCCCAGCTGCTCTCTCCAGGTTTCAATaGCGAGGGAGAAGGTGCCCGGCCAAGCATCGCGGA | + |
Preference number: 6 (lower is better) Translates to: QHALPAALSRFQ*RGRRCPAKHRG Trigger: TCCGCGATGCTTGGCCGGGCACCTTCTCCCTCGTCATTGAAACCTGGAGAGAGCAGCTGGGAGAGCATGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 72 bp | TGTAACCTCAGGTTGTTGAGTGCATCCGGGAGCGTGTaGACCGAAGGCTCCCGGGTCCCAGAAAGCAGGCGA | + |
Preference number: 6 (lower is better) Translates to: CNLRLLSASGSV*TEGSRVPESRR Trigger: TCGCCTGCTTTCTGGGACCCGGGAGCCTTCGGTCCACACGCTCCCGGATGCACTCAACAACCTGAGGTTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CAA 72 bp | GAGTCAGGATCTTCACCGCCAACACACAAGCCGCCATaGAAGCAGGGTCCATCTGCGCACGTGACCCCGCTC | + |
Preference number: 6 (lower is better) Translates to: ESGSSPPTHKPP*KQGPSAHVTPL Trigger: GAGCGGGGTCACGTGCGCAGATGGACCCTGCTTCAATGGCGGCTTGTGTGTTGGCGGTGAAGATCCTGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | CATCACAAGGTCCAGGCCCAGGTAAAAGGCATCCAGTaGTGGCAGGACCAGGAACCCTGGAGTTCAGGCAGC | + |
Preference number: 6 (lower is better) Translates to: HHKVQAQVKGIQ*WQDQEPWSSGS Trigger: GCTGCCTGAACTCCAGGGTTCCTGGTCCTGCCAGCACTGGATGCCTTTTACCTGGGCCTGGACCTTGTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 72 bp | CACAAGGTCCAGGCCCAGGTAAAAGGCATCCAGTGCTaGCAGGACCAGGAACCCTGGAGTTCAGGCAGCTAC | + |
Preference number: 6 (lower is better) Translates to: HKVQAQVKGIQC*QDQEPWSSGSY Trigger: GTAGCTGCCTGAACTCCAGGGTTCCTGGTCCTGCCAGCACTGGATGCCTTTTACCTGGGCCTGGACCTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 72 bp | CAAAGGAGCCAGAGGTTTCACTACAGCTGCCCCCATTaGCACATGGGTTCCCATCACAAGGTCCAGGCCCAG | + |
Preference number: 6 (lower is better) Translates to: QRSQRFHYSCPH*HMGSHHKVQAQ Trigger: CTGGGCCTGGACCTTGTGATGGGAACCCATGTGCCAATGGGGGCAGCTGTAGTGAAACCTCTGGCTCCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CAA 72 bp | TCAAAGGAGCCAGAGGTTTCACTACAGCTGCCCCCATaGGCACATGGGTTCCCATCACAAGGTCCAGGCCCA | + |
Preference number: 6 (lower is better) Translates to: SKEPEVSLQLPP*AHGFPSQGPGP Trigger: TGGGCCTGGACCTTGTGATGGGAACCCATGTGCCAATGGGGGCAGCTGTAGTGAAACCTCTGGCTCCTTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CAA 90 bp | CAGGCACATTCAAAGGAGCCAGAGGTTTCACTACAGCTGCCCCCATaGGCACATGGGTTCCCATCACAAGGTCCAGGCCCAGGTAAAAGG | + |
Preference number: 6 (lower is better) Translates to: QAHSKEPEVSLQLPP*AHGFPSQGPGPGKR Trigger: CCTTTTACCTGGGCCTGGACCTTGTGATGGGAACCCATGTGCCAATGGGGGCAGCTGTAGTGAAACCTCTGGCTCCTTTGAATGTGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS GCA 72 bp | AGGCACATTCAAAGGAGCCAGAGGTTTCACTACAGCTaGCCCCATTGGCACATGGGTTCCCATCACAAGGTC | + |
Preference number: 6 (lower is better) Translates to: RHIQRSQRFHYS*PHWHMGSHHKV Trigger: GACCTTGTGATGGGAACCCATGTGCCAATGGGGGCAGCTGTAGTGAAACCTCTGGCTCCTTTGAATGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CAA 72 bp | GCTACAGCGGTCCACCCTCTTCTCACAGTTAGAGCCTaGGAAACCAGGTGGGCAATGACAGACATAGGCAGA | + |
Preference number: 6 (lower is better) Translates to: ATAVHPLLTVRA*ETRWAMTDIGR Trigger: TCTGCCTATGTCTGTCATTGCCCACCTGGTTTCCAAGGCTCTAACTGTGAGAAGAGGGTGGACCGCTGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |
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CDS CCA 72 bp | CACCCTCTTCTCACAGTTAGAGCCTTGGAAACCAGGTaGGCAATGACAGACATAGGCAGAGTCAGGATCTTC | + |
Preference number: 6 (lower is better) Translates to: HPLLTVRALETR*AMTDIGRVRIF Trigger: GAAGATCCTGACTCTGCCTATGTCTGTCATTGCCCACCTGGTTTCCAAGGCTCTAACTGTGAGAAGAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108315.4 |